Miyakogusa Predicted Gene

Lj3g3v0929270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0929270.1 tr|I1KTQ4|I1KTQ4_SOYBN Citrate synthase
OS=Glycine max PE=3 SV=1,92.58,0,SUBFAMILY NOT NAMED,NULL; CITRATE
SYNTHASE,Citrate synthase-like; no description,Citrate
synthase-li,CUFF.41680.1
         (472 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   668   0.0  
AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family prot...   665   0.0  
AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 | chr3:22192888...   631   0.0  
AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 | chr3:21724564...    93   3e-19
AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 | chr2:17803132...    91   1e-18
AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 | chr3:21721066...    68   1e-11
AT2G11270.1 | Symbols:  | citrate synthase-related | chr2:448472...    56   6e-08

>AT2G44350.1 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=473
          Length = 473

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/472 (68%), Positives = 382/472 (80%), Gaps = 1/472 (0%)

Query: 1   MAFFXXXXXXXXXXXXXGQQSSLANSVRWLQTPSSGNTDLYSEVKELIPQYQERVKKLKK 60
           M FF             GQQSSL+NSVRW+Q  SS + DL S+++ELIP+ Q+R+KKLK 
Sbjct: 1   MVFFRSVSAFTRLRSRVGQQSSLSNSVRWIQMQSSTDLDLKSQLQELIPEQQDRLKKLKS 60

Query: 61  DHGNVELGKITVDMVLGGMRGMTALVWLGSAVDPDEGIRFRGMSIPECQKALPGAFPGGE 120
           +HG V+LG ITVDMV+GGMRGMT L+W  S +DP+EGIRFRG+SIPECQK LP A  G E
Sbjct: 61  EHGKVQLGNITVDMVIGGMRGMTGLLWETSLLDPEEGIRFRGLSIPECQKVLPTAQSGAE 120

Query: 121 PLPEAVLWLLLTGKIPSKEQVDSLAQELRSRATIPDYAYKAIDALPVSAHPMTQFTTGVM 180
           PLPE +LWLLLTGK+PSKEQV++L+++L +RA +PDY Y AIDALP +AHPMTQF +GVM
Sbjct: 121 PLPEGLLWLLLTGKVPSKEQVEALSKDLANRAAVPDYVYNAIDALPSTAHPMTQFASGVM 180

Query: 181 ALQVQSEFQKAYEGGIAKSRYWEPTYEDTLNLIARLPGIAAYIYRRIYKDGKIIPLDDTL 240
           ALQVQSEFQKAYE GI KS++WEPTYED LNLIAR+P +AAY+YRR+YK+G  IP D +L
Sbjct: 181 ALQVQSEFQKAYENGIHKSKFWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKSL 240

Query: 241 DYGANYAHMLGFDDPEMLEFMRLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXXX 300
           DYGAN++HMLGFDD ++ E MRLYI+IHSDHEGGNVS+HT HLV S LSDPY        
Sbjct: 241 DYGANFSHMLGFDDEKVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALN 300

Query: 301 XXXXXXXXXXNQEVLRWIRSLVNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRNT 360
                     NQEVL WI+S+V E G  DIS EQL +Y+ KTL+SGKV+PGYGHGVLRNT
Sbjct: 301 GLAGPLHGLANQEVLLWIKSVVEECGE-DISKEQLKEYVWKTLNSGKVIPGYGHGVLRNT 359

Query: 361 DPRYTCQREFALKHLPNDPLFQLVSKIKEVVPPILTKLGKVKNPWPNVDAHSGVLLNYYG 420
           DPRY CQREFALKHLP+DPLFQLVSK+ EVVPP+LT+LGKVKNPWPNVDAHSGVLLN+YG
Sbjct: 360 DPRYVCQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYG 419

Query: 421 LTEENYYTVLFGVARSIGVGPQLIWDRALGMALERPKSVTLEKLESLVGASS 472
           LTE  YYTVLFGV+RS+G+  QLIWDRALG+ALERPKSVT++ LE+    +S
Sbjct: 420 LTEARYYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWLEAHCKKAS 471


>AT2G44350.2 | Symbols: ATCS, CSY4 | Citrate synthase family protein
           | chr2:18316673-18320524 FORWARD LENGTH=474
          Length = 474

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/455 (70%), Positives = 379/455 (83%), Gaps = 1/455 (0%)

Query: 18  GQQSSLANSVRWLQTPSSGNTDLYSEVKELIPQYQERVKKLKKDHGNVELGKITVDMVLG 77
           GQQSSL+NSVRW+Q  SS + DL S+++ELIP+ Q+R+KKLK +HG V+LG ITVDMV+G
Sbjct: 19  GQQSSLSNSVRWIQMQSSTDLDLKSQLQELIPEQQDRLKKLKSEHGKVQLGNITVDMVIG 78

Query: 78  GMRGMTALVWLGSAVDPDEGIRFRGMSIPECQKALPGAFPGGEPLPEAVLWLLLTGKIPS 137
           GMRGMT L+W  S +DP+EGIRFRG+SIPECQK LP A  G EPLPE +LWLLLTGK+PS
Sbjct: 79  GMRGMTGLLWETSLLDPEEGIRFRGLSIPECQKVLPTAQSGAEPLPEGLLWLLLTGKVPS 138

Query: 138 KEQVDSLAQELRSRATIPDYAYKAIDALPVSAHPMTQFTTGVMALQVQSEFQKAYEGGIA 197
           KEQV++L+++L +RA +PDY Y AIDALP +AHPMTQF +GVMALQVQSEFQKAYE GI 
Sbjct: 139 KEQVEALSKDLANRAAVPDYVYNAIDALPSTAHPMTQFASGVMALQVQSEFQKAYENGIH 198

Query: 198 KSRYWEPTYEDTLNLIARLPGIAAYIYRRIYKDGKIIPLDDTLDYGANYAHMLGFDDPEM 257
           KS++WEPTYED LNLIAR+P +AAY+YRR+YK+G  IP D +LDYGAN++HMLGFDD ++
Sbjct: 199 KSKFWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKSLDYGANFSHMLGFDDEKV 258

Query: 258 LEFMRLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXXXXXXXXXXXXXNQEVLRW 317
            E MRLYI+IHSDHEGGNVS+HT HLV S LSDPY                  NQEVL W
Sbjct: 259 KELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLW 318

Query: 318 IRSLVNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRNTDPRYTCQREFALKHLPN 377
           I+S+V E G  DIS EQL +Y+ KTL+SGKV+PGYGHGVLRNTDPRY CQREFALKHLP+
Sbjct: 319 IKSVVEECGE-DISKEQLKEYVWKTLNSGKVIPGYGHGVLRNTDPRYVCQREFALKHLPD 377

Query: 378 DPLFQLVSKIKEVVPPILTKLGKVKNPWPNVDAHSGVLLNYYGLTEENYYTVLFGVARSI 437
           DPLFQLVSK+ EVVPP+LT+LGKVKNPWPNVDAHSGVLLN+YGLTE  YYTVLFGV+RS+
Sbjct: 378 DPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSL 437

Query: 438 GVGPQLIWDRALGMALERPKSVTLEKLESLVGASS 472
           G+  QLIWDRALG+ALERPKSVT++ LE+    +S
Sbjct: 438 GICSQLIWDRALGLALERPKSVTMDWLEAHCKKAS 472


>AT3G60100.1 | Symbols: CSY5 | citrate synthase 5 |
           chr3:22192888-22196246 FORWARD LENGTH=464
          Length = 464

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/469 (66%), Positives = 366/469 (78%), Gaps = 10/469 (2%)

Query: 1   MAFFXXXXXXXXXXXXXGQQSSLANSVRWLQTPSSGNTDLYSEVKELIPQYQERVKKLKK 60
           M FF              QQSSL+NSVRWL    S   DL S+++E+IP+ Q+R+KKLK 
Sbjct: 1   MVFFRSVSAISRLRSRAVQQSSLSNSVRWLH---SSELDLKSQMQEIIPEQQDRLKKLKS 57

Query: 61  DHGNVELGKITVDMVLGGMRGMTALVWLGSAVDPDEGIRFRGMSIPECQKALPGAFPGGE 120
           + G V +G ITVDMVLGGMRGMT L+W  S +D DEGIRFRGMSIPECQK LP A  G E
Sbjct: 58  EQGKVPVGNITVDMVLGGMRGMTGLLWETSLLDADEGIRFRGMSIPECQKILPSAESGEE 117

Query: 121 PLPEAVLWLLLTGKIPSKEQVDSLAQELRSRATIPDYAYKAIDALPVSAHPMTQFTTGVM 180
           PLPE++LWLLLTGK+P+KEQ ++L+ EL  RA +P     AIDALP +AHPMTQF +GVM
Sbjct: 118 PLPESLLWLLLTGKVPTKEQANALSTELAHRAAVP-----AIDALPSTAHPMTQFASGVM 172

Query: 181 ALQVQSEFQKAYE-GGIAKSRYWEPTYEDTLNLIARLPGIAAYIYRRIYKDGKIIPLDDT 239
           ALQVQSEFQKAYE G I+KS+YWEPT+ED LNLIAR+P +A+Y+YRR+YKDG IIPLDD+
Sbjct: 173 ALQVQSEFQKAYEQGDISKSKYWEPTFEDALNLIARVPVVASYVYRRMYKDGSIIPLDDS 232

Query: 240 LDYGANYAHMLGFDDPEMLEFMRLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXX 299
           LDYGAN++HMLGFD P+M E MRLY++IHSDHEGGNVS+H  HLV S LSDPY       
Sbjct: 233 LDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLSFAAAL 292

Query: 300 XXXXXXXXXXXNQEVLRWIRSLVNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRN 359
                      NQEVL WI+ +V E G   IS EQL DY+ KTL+SGKVVPGYGHGVLR 
Sbjct: 293 NGLAGPLHGLANQEVLLWIKLVVEECGE-SISKEQLKDYVWKTLNSGKVVPGYGHGVLRK 351

Query: 360 TDPRYTCQREFALKHLPNDPLFQLVSKIKEVVPPILTKLGKVKNPWPNVDAHSGVLLNYY 419
           TDPRY CQREFALKHLP+DPLFQLVSK+ EVVPPILT+LGKVKNPWPNVDAHSGVLLNYY
Sbjct: 352 TDPRYICQREFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYY 411

Query: 420 GLTEENYYTVLFGVARSIGVGPQLIWDRALGMALERPKSVTLEKLESLV 468
           GLTE  YYTVLFGV+RS+G+  QLIWDRALG+ LERPKSV ++ L++  
Sbjct: 412 GLTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVNMDWLDNFT 460


>AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 |
           chr3:21724564-21727458 REVERSE LENGTH=514
          Length = 514

 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 158/361 (43%), Gaps = 39/361 (10%)

Query: 92  VDPDEGI-RFRGMSIPECQKALPGAFPGGEPLPEAVLWLLLTGKIPSKEQVDSLAQELRS 150
           +D DEGI R+RG  I E  ++    F         V +LL+ G +PS+ Q+      +  
Sbjct: 112 IDGDEGILRYRGYPIEELAES--STFI-------EVAYLLMYGNLPSQSQLADWEFTVSQ 162

Query: 151 RATIPDYAYKAIDALPVSAHPMTQFTTGVMALQV-QSEFQKAYEG-GIAKSRYWEPTYED 208
            + +P      I ++P  AHPM    + + AL +   +   A  G  I KS+  +   + 
Sbjct: 163 HSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALSGQDIYKSK--QVRDKQ 220

Query: 209 TLNLIARLPGIAAYIYRRIYKDGKIIPLDDTLDYGANYAHMLGF-------DDPEMLEFM 261
            + ++ + P IAA  Y R      ++P    L Y  N+ +ML          +P +   +
Sbjct: 221 IVRILGKAPTIAAAAYLRTAGRPPVLP-SANLSYSENFLYMLDSMGNRSYKPNPRLARVL 279

Query: 262 RLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXXXXXXXXXXXXXNQEVLRWIRSL 321
            +   +H++HE  N S+  A  +AS   D Y                  N+ VL+    +
Sbjct: 280 DILFILHAEHE-MNCSTAAARHLASSGVDVYTACAGAVGALYGPLHGGANEAVLK----M 334

Query: 322 VNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRNTDPRYTCQREFA---LKHLPND 378
           + E GT     E + D+I    +  + + G+GH V +N DPR    ++ A      +  D
Sbjct: 335 LAEIGT----AENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRD 390

Query: 379 PLFQLVSKIKEVVPPILTKLGKVKNP-WPNVDAHSGVLLNYYGLTEENYYTVLFGVARSI 437
           PL ++   +++     L+    VK   +PNVD +SG++    G   E ++TVLF V R  
Sbjct: 391 PLIEVAVALEKAA---LSDEYFVKRKLYPNVDFYSGLIYRAMGFPPE-FFTVLFAVPRMA 446

Query: 438 G 438
           G
Sbjct: 447 G 447


>AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 |
           chr2:17803132-17805991 REVERSE LENGTH=509
          Length = 509

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 158/363 (43%), Gaps = 39/363 (10%)

Query: 90  SAVDPDEGI-RFRGMSIPECQKALPGAFPGGEPLPEAVLWLLLTGKIPSKEQVDSLAQEL 148
           S +D DEGI R+RG  I E   A    F         V +LL+ G +PS+ Q+      +
Sbjct: 105 SYIDGDEGILRYRGYPIEEM--AENSTF-------LEVAYLLMYGNLPSESQLSDWEFAV 155

Query: 149 RSRATIPDYAYKAIDALPVSAHPMTQFTTGVMALQV-QSEFQKAYEG-GIAKSRYWEPTY 206
              + +P      I ++P  AHPM    + + AL +   +   A  G  I  S+  +   
Sbjct: 156 SQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDIYDSK--QVRD 213

Query: 207 EDTLNLIARLPGIAAYIYRRIYKDGKIIPLDDTLDYGANYAHMLGF-------DDPEMLE 259
           +  + +I + P IAA  Y R+     ++P    L Y  N+ +ML          +P +  
Sbjct: 214 KQIIRIIGKAPTIAAAAYLRMAGRPPVLP-SGNLPYADNFLYMLDSLGNRSYKPNPRLAR 272

Query: 260 FMRLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXXXXXXXXXXXXXNQEVLRWIR 319
            + +   +H++HE  N S+  A  +AS   D Y                  N+ VL+   
Sbjct: 273 VLDILFILHAEHE-MNCSTAAARHLASSGVDVYTAVAGAVGALYGPLHGGANEAVLK--- 328

Query: 320 SLVNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRNTDPRYTCQREFA---LKHLP 376
            +++E GT     E + ++I    +  + + G+GH V +N DPR    +  A      + 
Sbjct: 329 -MLSEIGT----VENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVFSIVG 383

Query: 377 NDPLFQLVSKIKEVVPPILTKLGKVKNP-WPNVDAHSGVLLNYYGLTEENYYTVLFGVAR 435
            DPL ++   +++     L+    VK   +PNVD +SG++    G   E ++TVLF + R
Sbjct: 384 KDPLIEVAVALEKAA---LSDDYFVKRKLYPNVDFYSGLIYRAMGFPPE-FFTVLFAIPR 439

Query: 436 SIG 438
             G
Sbjct: 440 MAG 442


>AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 |
           chr3:21721066-21723726 REVERSE LENGTH=480
          Length = 480

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/344 (21%), Positives = 143/344 (41%), Gaps = 34/344 (9%)

Query: 90  SAVDPDEGI-RFRGMSIPECQKALPGAFPGGEPLPEAVLWLLLTGKIPSKEQVDSLAQEL 148
           S +D DEGI R+RG  + E  +         +     V +LL+ G +PS+ Q+      +
Sbjct: 107 SYIDGDEGILRYRGYPVEELAE---------KSTYTEVTYLLIYGNLPSQRQLADWEFAI 157

Query: 149 RSRATIPDYAYKAIDALPVSAHPMTQFTTGVMALQVQSEFQKAYEGGIAKSRYWEPTYED 208
              + +P      I ++P   HP+    T + AL +          G+   +  +   + 
Sbjct: 158 SQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQ 217

Query: 209 TLNLIARLPGIAAYIYRRIYKDGKIIPLDDTLDYGANYAHMLGF-------DDPEMLEFM 261
            + ++ + P IAA  Y R      + PL + L Y  N+ +M+          +P +   +
Sbjct: 218 IVRVLGQAPTIAAAAYLRKAGKPPVQPLSN-LSYSENFLYMVESMGDRSYKPNPRLARVL 276

Query: 262 RLYISIHSDHEGGNVSSHTAHLVASPLSDPYXXXXXXXXXXXXXXXXXXNQEVLRWIRSL 321
            +   + ++HE  N S+  A  ++S   D Y                   +  +    ++
Sbjct: 277 DILFILQAEHE-MNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATI----NM 331

Query: 322 VNEFGTPDISTEQLSDYIHKTLSSGKVVPGYGHGVLRNTDPRYTCQREFA---LKHLPND 378
           ++E GT     E + ++I    +  + + G+GH + +N DPR    ++ A      L  D
Sbjct: 332 LSEIGT----VENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRD 387

Query: 379 PLFQLVSKIKEVVPPILTKLGKVKNP-WPNVDAHSGVLLNYYGL 421
           PL ++   +++     L+    VK   +PNVD +SG++    G+
Sbjct: 388 PLVEVGDALEKAA---LSDEYFVKRKLYPNVDFYSGLINRAMGI 428


>AT2G11270.1 | Symbols:  | citrate synthase-related |
          chr2:4484720-4485308 FORWARD LENGTH=83
          Length = 83

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/35 (71%), Positives = 28/35 (80%)

Query: 51 YQERVKKLKKDHGNVELGKITVDMVLGGMRGMTAL 85
          +Q+R KKLK  HG V +G ITVDMVLGGMRGMT L
Sbjct: 42 FQDRSKKLKLKHGKVPVGNITVDMVLGGMRGMTGL 76