Miyakogusa Predicted Gene
- Lj3g3v0917050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0917050.1 Non Chatacterized Hit- tr|I1KTH6|I1KTH6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10814
PE,74.13,0,seg,NULL; coiled-coil,NULL,CUFF.41617.1
(327 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14750.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 216 1e-56
AT1G67170.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 120 2e-27
AT1G55170.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 110 9e-25
AT2G30120.2 | Symbols: | unknown protein; EXPRESSED IN: 22 plan... 90 2e-18
AT5G61920.2 | Symbols: | unknown protein; INVOLVED IN: biologic... 65 8e-11
AT5G61920.1 | Symbols: | unknown protein; INVOLVED IN: biologic... 65 8e-11
AT2G30120.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 62 7e-10
>AT3G14750.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G67170.1); Has 4036 Blast hits to 3091 proteins
in 519 species: Archae - 61; Bacteria - 669; Metazoa -
1503; Fungi - 255; Plants - 421; Viruses - 4; Other
Eukaryotes - 1123 (source: NCBI BLink). |
chr3:4953765-4955373 REVERSE LENGTH=331
Length = 331
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/256 (47%), Positives = 156/256 (60%), Gaps = 10/256 (3%)
Query: 1 MSGRNRGXXXXXX---XXAGLSPPVHDPMFGARGGGAIXXXXXXXXXXXXXAFLEELRES 57
MSGRNRG +GL PVH P F + +++ RE
Sbjct: 1 MSGRNRGPPPPSMKGGSYSGLQAPVHQPPF------VRGLGGGPVPPPPHPSMIDDSREP 54
Query: 58 QXXXXXXXXXXXXAAVIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRMA 117
Q + ++E+RLAAQ+ ++QGLL DNQ LAATHVALKQE E AQHELQR+
Sbjct: 55 QFRVDARGLPPQFS-ILEDRLAAQNQDVQGLLADNQRLAATHVALKQELEVAQHELQRIM 113
Query: 118 HFNESLRADTEGRMRELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQ 177
H+ +SLRA+ E MRE+ DKS DIKE T RQ+L+ QV
Sbjct: 114 HYIDSLRAEEEIMMREMYDKSMRSEMELREVDAMRAEIQKIRADIKEFTSGRQELTSQVH 173
Query: 178 AMTHDLGRMNNDLKQVPALKADVEAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLIS 237
MT DL R+ DL+Q+P L A++E +QELQRARAAI+YEKKG+AENYEHG++ME KL++
Sbjct: 174 LMTQDLARLTADLQQIPTLTAEIENTKQELQRARAAIDYEKKGYAENYEHGKIMEHKLVA 233
Query: 238 MAREMEKLRAEISNAE 253
MARE+EKLRAEI+N+E
Sbjct: 234 MARELEKLRAEIANSE 249
>AT1G67170.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins
in 533 species: Archae - 87; Bacteria - 653; Metazoa -
2554; Fungi - 380; Plants - 418; Viruses - 16; Other
Eukaryotes - 1370 (source: NCBI BLink). |
chr1:25127727-25129145 FORWARD LENGTH=359
Length = 359
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 107/179 (59%)
Query: 73 VIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRMAHFNESLRADTEGRMR 132
V+E++ AQHGE+Q L +NQ L TH +L+QE AAQHE+Q + S++++ E RM
Sbjct: 57 VMEQKFVAQHGELQRLAIENQRLGGTHGSLRQELAAAQHEIQMLHAQIGSMKSEREQRMM 116
Query: 133 ELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDLKQ 192
L +K + + L V R++L +V +T +L + +D++Q
Sbjct: 117 GLAEKVAKMETELQKSEAVKLEMQQARAEARSLVVAREELMSKVHQLTQELQKSRSDVQQ 176
Query: 193 VPALKADVEAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLISMAREMEKLRAEISN 251
+PAL +++E +RQE Q+ RA +YEKK + ++ E Q MEK ++MARE+EKL+A++ N
Sbjct: 177 IPALMSELENLRQEYQQCRATYDYEKKFYNDHLESLQAMEKNYMTMAREVEKLQAQLMN 235
>AT1G55170.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G14750.1); Has 13439 Blast hits to 8993
proteins in 828 species: Archae - 344; Bacteria - 1469;
Metazoa - 6958; Fungi - 1008; Plants - 683; Viruses -
29; Other Eukaryotes - 2948 (source: NCBI BLink). |
chr1:20580578-20581706 FORWARD LENGTH=283
Length = 283
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 101/173 (58%)
Query: 81 QHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRMAHFNESLRADTEGRMRELCDKSXX 140
Q EI+ LL DN LA + L++E AA+ EL RM LRA+ + ++RE +K
Sbjct: 55 QDAEIRRLLSDNHGLADDRMVLERELVAAKEELHRMNLMISDLRAEQDLQLREFSEKRHK 114
Query: 141 XXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDLKQVPALKADV 200
++++L ++++LSG VQ + DL ++ +D KQ+P ++A+V
Sbjct: 115 LEGDVRAMESYKKEASQLRGEVQKLDEIKRELSGNVQLLRKDLAKLQSDNKQIPGMRAEV 174
Query: 201 EAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLISMAREMEKLRAEISNAE 253
+ +++EL AR AIEYEKK E E Q MEK ++SMARE+EKLRAE++ +
Sbjct: 175 KDLQKELMHARDAIEYEKKEKFELMEQRQTMEKNMVSMAREVEKLRAELATVD 227
>AT2G30120.2 | Symbols: | unknown protein; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G14750.1); Has 2527 Blast hits to 2101 proteins
in 358 species: Archae - 77; Bacteria - 245; Metazoa -
1087; Fungi - 215; Plants - 350; Viruses - 4; Other
Eukaryotes - 549 (source: NCBI BLink). |
chr2:12860607-12861862 REVERSE LENGTH=288
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%)
Query: 71 AAVIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRMAHFNESLRADTEGR 130
+ ++E+R+A QH EIQ LL DNQ LA H+ LK + A+ EL+R+ ++A+ E +
Sbjct: 36 SVILEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAK 95
Query: 131 MRELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDL 190
+RE+ + D++ L RQ+L+ ++ ++ + +
Sbjct: 96 VREVYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNS 155
Query: 191 KQVPALKADVEAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLISMAREMEKLRAEIS 250
+ +K ++E +R E+++ RAA+E EKK A N H + MEK + + RE+ KL E+
Sbjct: 156 DRAIEVKLEIEILRGEIRKGRAALELEKKTRASNLHHERGMEKTIDHLNREIVKLEEELV 215
Query: 251 NAE 253
+ E
Sbjct: 216 DLE 218
>AT5G61920.2 | Symbols: | unknown protein; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4
anthesis, F mature embryo stage, petal differentiation
and expansion stage, E expanded cotyledon stage, D
bilateral stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr5:24864830-24865628 FORWARD LENGTH=238
Length = 238
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 73 VIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRM-AHFNESLRADTEGRM 131
++E ++A Q EI L DN+ LA+++VALK++ A E+Q + AH ++ D E ++
Sbjct: 52 ILENKIAVQAAEIDRLSNDNRKLASSYVALKEDLTVADREVQGLRAHIRKT-ETDHEIQI 110
Query: 132 RELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDLK 191
R +K + L R++L+ +V+ DL ++ + +
Sbjct: 111 RSTLEKIAKMEGMVKNRENIRREVQSAHIEAHRLAREREELASKVKLGMKDLKKVCLEAE 170
Query: 192 QVPALKADVEAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLISMAREMEKLRAEISN 251
+ A ++E +++E QR R E EK G E + ME+K+I + +EKLR+EIS
Sbjct: 171 SLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIST 230
Query: 252 A 252
A
Sbjct: 231 A 231
>AT5G61920.1 | Symbols: | unknown protein; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4
anthesis, F mature embryo stage, petal differentiation
and expansion stage, E expanded cotyledon stage, D
bilateral stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink). | chr5:24864830-24865628 FORWARD LENGTH=238
Length = 238
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 73 VIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRM-AHFNESLRADTEGRM 131
++E ++A Q EI L DN+ LA+++VALK++ A E+Q + AH ++ D E ++
Sbjct: 52 ILENKIAVQAAEIDRLSNDNRKLASSYVALKEDLTVADREVQGLRAHIRKT-ETDHEIQI 110
Query: 132 RELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDLK 191
R +K + L R++L+ +V+ DL ++ + +
Sbjct: 111 RSTLEKIAKMEGMVKNRENIRREVQSAHIEAHRLAREREELASKVKLGMKDLKKVCLEAE 170
Query: 192 QVPALKADVEAMRQELQRARAAIEYEKKGFAENYEHGQVMEKKLISMAREMEKLRAEISN 251
+ A ++E +++E QR R E EK G E + ME+K+I + +EKLR+EIS
Sbjct: 171 SLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIST 230
Query: 252 A 252
A
Sbjct: 231 A 231
>AT2G30120.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G14750.1); Has 275 Blast hits to 241 proteins
in 42 species: Archae - 4; Bacteria - 15; Metazoa - 15;
Fungi - 4; Plants - 188; Viruses - 0; Other Eukaryotes -
49 (source: NCBI BLink). | chr2:12861332-12861862
REVERSE LENGTH=176
Length = 176
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%)
Query: 71 AAVIEERLAAQHGEIQGLLGDNQSLAATHVALKQEQEAAQHELQRMAHFNESLRADTEGR 130
+ ++E+R+A QH EIQ LL DNQ LA H+ LK + A+ EL+R+ ++A+ E +
Sbjct: 36 SVILEDRIAIQHREIQSLLNDNQRLAVAHIGLKDQLNVAKRELERLLETAVKVKAEGEAK 95
Query: 131 MRELCDKSXXXXXXXXXXXXXXXXXXXXXXDIKELTVVRQDLSGQVQAMTHDLGRMNNDL 190
+RE+ + D++ L RQ+L+ ++ ++ + +
Sbjct: 96 VREVYQNALRMEAEARVIDGLGAELGQVRSDVQRLGSDRQELATELAMFDDEMAKAKPNS 155
Query: 191 KQVPALKADVEAMRQELQRAR 211
+ +K ++E +R E+++ R
Sbjct: 156 DRAIEVKLEIEILRGEIRKGR 176