Miyakogusa Predicted Gene

Lj3g3v0917040.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0917040.1 Non Chatacterized Hit- tr|D8TCR5|D8TCR5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,37.19,0.00000000000004,SUBFAMILY NOT NAMED,NULL; RAB3-GAP
REGULATORY DOMAIN,Protein N-terminal asparagine
amidohydrolase,CUFF.41614.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44420.1 | Symbols:  | protein N-terminal asparagine amidohyd...   205   9e-54

>AT2G44420.1 | Symbols:  | protein N-terminal asparagine
           amidohydrolase family protein | chr2:18330568-18332696
           FORWARD LENGTH=347
          Length = 347

 Score =  205 bits (522), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 90/147 (61%), Positives = 118/147 (80%)

Query: 1   MCVLGHNTRKDSDGKTYPIFNGFVVETATGVVIPASFDRSSRCPDEVVRRIRVSASYEDT 60
           + +LGHNT+ DS   T PIFNG +V T+TG ++PASF+R+SRCPDE+VRRIRVS+S+ED+
Sbjct: 190 LFILGHNTKLDSQANTCPIFNGCLVNTSTGAILPASFNRTSRCPDEIVRRIRVSSSFEDS 249

Query: 61  SWNGKLLETYDYSTDCFKIAPCRWTLRQYHIALSLQNYSDSELLSICSTSPTAEGPDFVD 120
           SW GKLL+TYD  TD F IAPCRWT+R       L   +D E+L+ CSTSP+AEGPDFV+
Sbjct: 250 SWKGKLLDTYDTKTDRFIIAPCRWTMRLIEYVWELNQLTDEEILTNCSTSPSAEGPDFVN 309

Query: 121 NLKRQWNYLIEHPYWTETFPKRQPRVF 147
           +L+R W YL+++P W++TFP+RQPRVF
Sbjct: 310 SLRRNWGYLLKYPEWSKTFPRRQPRVF 336