Miyakogusa Predicted Gene

Lj3g3v0893730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0893730.1 tr|I0Z5P1|I0Z5P1_9CHLO Uroporphyrin-III C-m
OS=Coccomyxa subellipsoidea C-169 PE=3 SV=1,56.63,1e-18,seg,NULL;
TP_methylase,Tetrapyrrole methylase; UROPORPHYRIN-III
METHYLTRANSFERASE,NULL; METHYLTETRAH,CUFF.41627.1
         (220 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40850.1 | Symbols: UPM1 | urophorphyrin methylase 1 | chr5:1...   171   3e-43
AT5G40850.2 | Symbols: UPM1 | urophorphyrin methylase 1 | chr5:1...   171   4e-43

>AT5G40850.1 | Symbols: UPM1 | urophorphyrin methylase 1 |
           chr5:16367205-16368724 FORWARD LENGTH=369
          Length = 369

 Score =  171 bits (433), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 108/154 (70%), Gaps = 5/154 (3%)

Query: 37  SASPFTEKHSTERYQRDQWVYQNPQRETMSCPLP---SDSGAFREDDIAXXXXXXXXXXX 93
           S+SPFTEKHS ERYQRDQW+Y+  +    S P P    D    RE+DIA           
Sbjct: 38  SSSPFTEKHSVERYQRDQWLYKAVEPTPPSTPSPSPFEDEVFVRENDIASQLPELKKLLA 97

Query: 94  XXXXXXXSEGNCSGGNCEPGDVFLVGTGPGDPELLTLKAVRVMESADLLLYDRLVSNDVL 153
                      C GG+C PGDV+LVGTGPGDPELLTLKAVRV++SADLLLYDRLVSNDVL
Sbjct: 98  VLKEKRVK--GCKGGDCGPGDVYLVGTGPGDPELLTLKAVRVIQSADLLLYDRLVSNDVL 155

Query: 154 DLVSPNAKLLYVGKTAGYHSRTQVKMLAIFLAFS 187
           +LV+P+A+LLYVGKTAGYHSRTQ ++  + L F+
Sbjct: 156 ELVAPDARLLYVGKTAGYHSRTQEEIHELLLNFA 189


>AT5G40850.2 | Symbols: UPM1 | urophorphyrin methylase 1 |
           chr5:16367205-16368650 FORWARD LENGTH=351
          Length = 351

 Score =  171 bits (432), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 108/154 (70%), Gaps = 5/154 (3%)

Query: 37  SASPFTEKHSTERYQRDQWVYQNPQRETMSCPLP---SDSGAFREDDIAXXXXXXXXXXX 93
           S+SPFTEKHS ERYQRDQW+Y+  +    S P P    D    RE+DIA           
Sbjct: 38  SSSPFTEKHSVERYQRDQWLYKAVEPTPPSTPSPSPFEDEVFVRENDIASQLPELKKLLA 97

Query: 94  XXXXXXXSEGNCSGGNCEPGDVFLVGTGPGDPELLTLKAVRVMESADLLLYDRLVSNDVL 153
                      C GG+C PGDV+LVGTGPGDPELLTLKAVRV++SADLLLYDRLVSNDVL
Sbjct: 98  VLKEKRVK--GCKGGDCGPGDVYLVGTGPGDPELLTLKAVRVIQSADLLLYDRLVSNDVL 155

Query: 154 DLVSPNAKLLYVGKTAGYHSRTQVKMLAIFLAFS 187
           +LV+P+A+LLYVGKTAGYHSRTQ ++  + L F+
Sbjct: 156 ELVAPDARLLYVGKTAGYHSRTQEEIHELLLNFA 189