Miyakogusa Predicted Gene

Lj3g3v0883720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0883720.1 Non Chatacterized Hit- tr|H3HQ15|H3HQ15_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,37.74,0.000000000000008,Thioredoxin-like,Thioredoxin-like
fold; coiled-coil,NULL; DUF953,Protein of unknown function
DUF953,,CUFF.41593.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42850.2 | Symbols:  | Thioredoxin superfamily protein | chr5...   167   2e-42
AT5G42850.1 | Symbols:  | Thioredoxin superfamily protein | chr5...   167   2e-42

>AT5G42850.2 | Symbols:  | Thioredoxin superfamily protein |
           chr5:17182072-17182568 REVERSE LENGTH=134
          Length = 134

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 1/120 (0%)

Query: 1   MPLKLFDATVSTFDGVFDKFRS-EASQNKANLILFLADKDPATSLSWCPDCVRAEPVIYK 59
           M LK  DA  ST +    + +S E S++K N ILFLAD DP T  SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 60  KLEASPDDIALIRAYVGDRPTWRNPHHPWRVDPKFKLTGVPTLIRWENDEVKGRLEDYEA 119
            LE  P+++ LIRAY GDRPTWR P HPWRVD +FKLTGVPTL+RW+ D VKGRLED++A
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRWDGDSVKGRLEDHQA 120


>AT5G42850.1 | Symbols:  | Thioredoxin superfamily protein |
           chr5:17182072-17182568 REVERSE LENGTH=134
          Length = 134

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/120 (65%), Positives = 91/120 (75%), Gaps = 1/120 (0%)

Query: 1   MPLKLFDATVSTFDGVFDKFRS-EASQNKANLILFLADKDPATSLSWCPDCVRAEPVIYK 59
           M LK  DA  ST +    + +S E S++K N ILFLAD DP T  SWCPDCVRAEPVIYK
Sbjct: 1   MTLKKVDANPSTLESSLQELKSDETSRSKINFILFLADNDPTTGQSWCPDCVRAEPVIYK 60

Query: 60  KLEASPDDIALIRAYVGDRPTWRNPHHPWRVDPKFKLTGVPTLIRWENDEVKGRLEDYEA 119
            LE  P+++ LIRAY GDRPTWR P HPWRVD +FKLTGVPTL+RW+ D VKGRLED++A
Sbjct: 61  TLEEFPEEVKLIRAYAGDRPTWRTPAHPWRVDSRFKLTGVPTLVRWDGDSVKGRLEDHQA 120