Miyakogusa Predicted Gene
- Lj3g3v0850590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0850590.1 Non Chatacterized Hit- tr|I1MJM7|I1MJM7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34332
PE,68.17,0,seg,NULL; ZF_RING_2,Zinc finger, RING-type; ZF_C3H1,Zinc
finger, CCCH-type; ZF_RING_1,Zinc finger, R,CUFF.41580.1
(452 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08505.1 | Symbols: | zinc finger (CCCH-type/C3HC4-type RING... 304 7e-83
AT3G08505.2 | Symbols: | zinc finger (CCCH-type/C3HC4-type RING... 304 7e-83
>AT3G08505.1 | Symbols: | zinc finger (CCCH-type/C3HC4-type RING
finger) family protein | chr3:2580603-2582043 REVERSE
LENGTH=323
Length = 323
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/322 (45%), Positives = 205/322 (63%), Gaps = 32/322 (9%)
Query: 1 MFNRGICKFYARGRCLKGEQCDYSHQRNDTPVDICAYYQKGSCTYGSQCRFKHVKXXXXX 60
M +R +CKF+ G CLKGE C++SH D P ++C +YQK C YGS+CR+ HV+
Sbjct: 1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR----- 55
Query: 61 XXXXXXXXLVSDSAAAHTTRGTSSSVRKAANLSSYDKRAQSLQHKHQESLGHGDVGESST 120
+S++ +++ S D+ + +H + G + G+ S+
Sbjct: 56 ---------------------AASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSS 94
Query: 121 RTATATPSVHIFCPFAAA-DCPSRDKCPLIHGNQCSYCEKYCLHPTDREGKKNHLRTCEK 179
P + C FAAA DCP ++CP +HG+ C+ C K CLHP E ++ H + CEK
Sbjct: 95 NVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKECEK 154
Query: 180 KEKYLQDL--SKEVECNVCLERVLSKPKQSECKFGLLPECDHAFCLSCIRNWRNSASASG 237
K+K+++ L S+++EC+VCL+R+LSK E KFGLL ECDH FC+ CIRNWR+SA SG
Sbjct: 155 KQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSG 214
Query: 238 MDINNNANTVRTCPVCRKLSYFVIPSAIWFSTKEEKQEIIDNYKGKCKSVDCKHFNFGNG 297
MD+N +T+R CP+CRKLSYFV+PS +W+S+ EEK+EIID YK K +S+DCKHFNFGNG
Sbjct: 215 MDVN---STLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNG 271
Query: 298 NCPFGARCFYKHTVKQGSYTDI 319
NCPFGA CFYKH G ++
Sbjct: 272 NCPFGASCFYKHAYSDGHLEEV 293
>AT3G08505.2 | Symbols: | zinc finger (CCCH-type/C3HC4-type RING
finger) family protein | chr3:2580603-2582043 REVERSE
LENGTH=323
Length = 323
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 147/322 (45%), Positives = 205/322 (63%), Gaps = 32/322 (9%)
Query: 1 MFNRGICKFYARGRCLKGEQCDYSHQRNDTPVDICAYYQKGSCTYGSQCRFKHVKXXXXX 60
M +R +CKF+ G CLKGE C++SH D P ++C +YQK C YGS+CR+ HV+
Sbjct: 1 MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR----- 55
Query: 61 XXXXXXXXLVSDSAAAHTTRGTSSSVRKAANLSSYDKRAQSLQHKHQESLGHGDVGESST 120
+S++ +++ S D+ + +H + G + G+ S+
Sbjct: 56 ---------------------AASNLPLSSDSESLDRSISTTPSRHLQQQGDNNDGDKSS 94
Query: 121 RTATATPSVHIFCPFAAA-DCPSRDKCPLIHGNQCSYCEKYCLHPTDREGKKNHLRTCEK 179
P + C FAAA DCP ++CP +HG+ C+ C K CLHP E ++ H + CEK
Sbjct: 95 NVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPFRPEEREEHTKECEK 154
Query: 180 KEKYLQDL--SKEVECNVCLERVLSKPKQSECKFGLLPECDHAFCLSCIRNWRNSASASG 237
K+K+++ L S+++EC+VCL+R+LSK E KFGLL ECDH FC+ CIRNWR+SA SG
Sbjct: 155 KQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCIQCIRNWRSSAPVSG 214
Query: 238 MDINNNANTVRTCPVCRKLSYFVIPSAIWFSTKEEKQEIIDNYKGKCKSVDCKHFNFGNG 297
MD+N +T+R CP+CRKLSYFV+PS +W+S+ EEK+EIID YK K +S+DCKHFNFGNG
Sbjct: 215 MDVN---STLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRSIDCKHFNFGNG 271
Query: 298 NCPFGARCFYKHTVKQGSYTDI 319
NCPFGA CFYKH G ++
Sbjct: 272 NCPFGASCFYKHAYSDGHLEEV 293