Miyakogusa Predicted Gene
- Lj3g3v0824710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0824710.1 Non Chatacterized Hit- tr|Q4QFU7|Q4QFU7_LEIMA
Putative uncharacterized protein OS=Leishmania major
G,30.8,2e-18,Choline_transpo,Choline transporter-like; seg,NULL;
PREDICTED PROTEIN,NULL; CTL TRANSPORTER,Choline ,CUFF.41509.1
(561 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13760.1 | Symbols: | Plasma-membrane choline transporter fa... 639 0.0
AT3G03700.1 | Symbols: | Plasma-membrane choline transporter fa... 182 4e-46
AT3G04440.1 | Symbols: | Plasma-membrane choline transporter fa... 182 5e-46
AT5G17830.1 | Symbols: | Plasma-membrane choline transporter fa... 130 3e-30
AT1G25500.2 | Symbols: | Plasma-membrane choline transporter fa... 92 1e-18
AT1G25500.3 | Symbols: | Plasma-membrane choline transporter fa... 88 2e-17
AT1G25500.1 | Symbols: | Plasma-membrane choline transporter fa... 84 3e-16
>AT5G13760.1 | Symbols: | Plasma-membrane choline transporter
family protein | chr5:4442102-4444565 FORWARD LENGTH=569
Length = 569
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/434 (69%), Positives = 354/434 (81%), Gaps = 1/434 (0%)
Query: 125 TLNSRKYTNRISLFLFVVHMFIAIALVGFLVFKGVQGLILESESMKRKKKNMLKFFLPQV 184
+LNS KYTN+ L LF+ H +AI VGFLVF+GVQGLI + S+KRK+K +L+F LPQV
Sbjct: 133 SLNSTKYTNKFFLLLFIFHKVVAIGFVGFLVFRGVQGLIGSNGSVKRKEKKILRFLLPQV 192
Query: 185 EAASFMSIILAFIWQQAIRKWPTFMVHFILWFTFVMSLAAGILLICFQKPPTDGVGVCFI 244
EAAS +SIILAF+WQ A R WP FM+HFILW TF+MSL++GILL+CFQ P TD VGVC I
Sbjct: 193 EAASLLSIILAFLWQMAFRIWPDFMIHFILWSTFLMSLSSGILLLCFQMPATDAVGVCLI 252
Query: 245 AFAIGNGLYACWASNRIKFCCKILNLSLQPLSKFPDLNKPTYYMLGAGFLWISLWSLAVI 304
AF+IGNGLYACW + RIKFC KIL SL+P+SKF DLN PTYYML AGFLW+S+W VI
Sbjct: 253 AFSIGNGLYACWVTRRIKFCSKILVKSLEPVSKFSDLNLPTYYMLAAGFLWMSMWIFGVI 312
Query: 305 GSLNFYFPPLVILALGLSLAWTTEVMRNVVNITVSRVIALYYLRGMQSSTQFCFLRALTR 364
G+LNFYFPPLVI+ L LSLAWTTEVMRN+VN+TVSRVIALYYLRGMQSST+F F RAL+R
Sbjct: 313 GALNFYFPPLVIIGLVLSLAWTTEVMRNIVNLTVSRVIALYYLRGMQSSTRFSFQRALSR 372
Query: 365 NLGSACLGSLFVPAIEXXXXXXXXXXXXEGEDEFMFCCARCCLGVMESIFRNGNSWAYVQ 424
NLGSACLGSLFVP IE +GEDEFMFCCA CCL +M+ IF +GN WA+VQ
Sbjct: 373 NLGSACLGSLFVPTIEALRILARGLNLLKGEDEFMFCCANCCLRLMDFIFEHGNGWAFVQ 432
Query: 425 IAAYGRGFVMASQETWALFEKEDMVAVVDSDITSSICFLTGVCSGSMCVIVVAAWTHTVH 484
IAAYG+GFV ASQ+TW LFE EDMV +VD+DITSSICFLTG+CSG +C+IV AAWTHTV+
Sbjct: 433 IAAYGKGFVRASQDTWKLFEDEDMVEIVDADITSSICFLTGICSGCVCLIVAAAWTHTVY 492
Query: 485 KSFTATLSLLTFFIGYLLTRIAMAVPHACVSCYYVCYAENPENRLF-DKTIKDRQALLET 543
K FTAT+SLL FFIGYL+TRI+MA+PHACV CYY CYAENPE+R F DK IK RQ ++++
Sbjct: 493 KPFTATISLLAFFIGYLMTRISMALPHACVGCYYTCYAENPESRFFEDKVIKTRQDMIKS 552
Query: 544 RREMVVPTPRGVRR 557
R V T VRR
Sbjct: 553 GRVAVTSTTPRVRR 566
>AT3G03700.1 | Symbols: | Plasma-membrane choline transporter
family protein | chr3:916503-918327 FORWARD LENGTH=482
Length = 482
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 201/437 (45%), Gaps = 30/437 (6%)
Query: 139 LFVVHMFIAIALVGFLVFK-GVQGLILESESMKRKKKNMLKFFLPQVEAASFMSIILAFI 197
LF +F + L+ LV ++GLI S KK + P + A+ +S I +
Sbjct: 56 LFKGLLFSQLTLISLLVIVLTIRGLISASTHHFHLKK-----WYPPLLASVAVSGIASLA 110
Query: 198 WQQAIRKWPTFMVHFILWFTFVMSLAAGILLICFQKPPTDGVGVCFIAFAIGNGLYACWA 257
WQ P+ V W + +++ + GILL+ G+G F+ FAI LY CW
Sbjct: 111 WQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVDAGIGAVFVLFAITQSLYGCWI 170
Query: 258 SNRIKFCCKILNLSLQPLSKFPDLNKPTYYMLG-------AGFLWISLW-SLAVIGSLNF 309
+ R+++ KIL+L+ + FP L +GFL + + + +L+
Sbjct: 171 TPRLEYTDKILSLA----TAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRTNLDI 226
Query: 310 YFPPLVILALGLSLAWTTEVMRNVVNITVSRVIALYYLRGMQSSTQFCFLRALTRNLGSA 369
F ++I+ SLAWT +V++NV + +SR + + G F + GS
Sbjct: 227 LFISVIII----SLAWTMQVIKNVQQVAISRARYVNFAHGEDMDAWNAFRITMKHLTGSI 282
Query: 370 CLGSLFVPAIEXXXXXXXXXXXXEGE-DEFMFCCARCCLGVMESIFRNGNSWAYVQIAAY 428
C+GS VP I G DE M+ A C + + GN W +V + Y
Sbjct: 283 CVGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTIANKLITLGNRWGFVHVGTY 342
Query: 429 GRGFVMASQETWALFEKE-DMVAVVDSDITSSICFLTGVCSGSMCVIVVAAWTHTVHKSF 487
+GF+ AS +TW F + ++DSD+TSS CFL+ V G++ + W +HK +
Sbjct: 343 DKGFMEASSDTWKKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAVSSLTAGIWMLLIHKDY 402
Query: 488 TATLSLLTFFIGYLLTRIAMAVPHACVSCYYVCYAENPENRLFDKTIKDRQALLE----- 542
++L F IGY + R+ +A ACV YYV Y+E+P++ FD TI R L+
Sbjct: 403 ALEVTLYAFIIGYFVGRVGLAWLQACVLAYYVAYSEDPQSMRFDGTIPQRIQRLQMLSAH 462
Query: 543 -TRREMVVPTPRGVRRY 558
RE+ V R Y
Sbjct: 463 RDNRELEVGRDREEDSY 479
>AT3G04440.1 | Symbols: | Plasma-membrane choline transporter
family protein | chr3:1178718-1180537 FORWARD LENGTH=482
Length = 482
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 201/437 (45%), Gaps = 30/437 (6%)
Query: 139 LFVVHMFIAIALVGFLVFK-GVQGLILESESMKRKKKNMLKFFLPQVEAASFMSIILAFI 197
LF +F + L+ LV ++GLI S KK + P + A+ +S I +
Sbjct: 56 LFKGLLFSQLTLISLLVIVLTIRGLISASTHHFHLKK-----WYPPLLASVAVSGIASLA 110
Query: 198 WQQAIRKWPTFMVHFILWFTFVMSLAAGILLICFQKPPTDGVGVCFIAFAIGNGLYACWA 257
WQ P+ V W + +++ + GILL+ G+G F+ FAI LY CW
Sbjct: 111 WQCIFIYNPSRAVKATFWLSPILTCSVGILLVLIGSAVDAGIGAVFVLFAITQSLYGCWI 170
Query: 258 SNRIKFCCKILNLSLQPLSKFPDLNKPTYYMLG-------AGFLWISLW-SLAVIGSLNF 309
+ R+++ KIL+L+ + FP L +GFL + + + +L+
Sbjct: 171 TPRLEYTDKILSLA----TAFPPARTREVVCLSIIVSVVYSGFLVTGIGGATSTRTNLDI 226
Query: 310 YFPPLVILALGLSLAWTTEVMRNVVNITVSRVIALYYLRGMQSSTQFCFLRALTRNLGSA 369
F ++I+ SLAWT +V++NV + +SR + + G F + GS
Sbjct: 227 LFISVIII----SLAWTMQVIKNVQQVAISRARYVNFAHGEDMDAWNAFRITMKHLTGSI 282
Query: 370 CLGSLFVPAIEXXXXXXXXXXXXEGE-DEFMFCCARCCLGVMESIFRNGNSWAYVQIAAY 428
C+GS VP I G DE M+ A C + + GN W +V + Y
Sbjct: 283 CVGSTLVPIIVFIRGSIRSVNLMSGSSDEVMYSGADCFSTIANKLITLGNRWGFVHVGTY 342
Query: 429 GRGFVMASQETWALFEKE-DMVAVVDSDITSSICFLTGVCSGSMCVIVVAAWTHTVHKSF 487
+GF+ AS +TW F + ++DSD+TSS CFL+ V G++ + W +HK +
Sbjct: 343 DKGFMEASSDTWKKFRSTTGLEKLIDSDLTSSFCFLSAVSVGAVSSLTAGIWMLLIHKDY 402
Query: 488 TATLSLLTFFIGYLLTRIAMAVPHACVSCYYVCYAENPENRLFDKTIKDRQALLE----- 542
++L F IGY + R+ +A ACV YYV Y+E+P++ FD TI R L+
Sbjct: 403 ALEVTLYAFIIGYFVGRVGLAWLQACVLAYYVAYSEDPQSMRFDGTIPQRIQRLQMLSAH 462
Query: 543 -TRREMVVPTPRGVRRY 558
RE+ V R Y
Sbjct: 463 RDNRELEVGRDREEDSY 479
>AT5G17830.1 | Symbols: | Plasma-membrane choline transporter
family protein | chr5:5893382-5895367 FORWARD LENGTH=474
Length = 474
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 35/352 (9%)
Query: 214 LWFTFVMSLAAGILLICFQK--PPTDGVGVCFIAFAIGNGLYACW-ASNRIKFCCKILNL 270
WFT + +++ G+ LI K P +G + ++I +Y +NR +F + ++
Sbjct: 125 FWFTPLFTISVGLFLILLDKSNPVVLWIGALLVFYSIVTAVYGSLHVTNRHEFTFQTMST 184
Query: 271 S---LQPLSKFPDLNKPTYYMLGAGFLWISLWSLAVIGS-LNFYFPPLVILALGLSLAWT 326
+ L ++ + + + FL + G+ L+ F ++++ +LAWT
Sbjct: 185 ATGILPARTRAIAVVSVIISVFYSDFLVAGIGGATATGTRLDILFISIIVI----NLAWT 240
Query: 327 TEVMRNVVNITVSRVIALYYLRGMQSSTQFCFLRALTRNLGSACLGSLFVPAIEXXXXXX 386
+V++NV + +S+ I +Y+ R + L + LGS C+GS VP I
Sbjct: 241 MQVIKNVQEVAISKAIYVYFSRDDLMNACDALGVTLKKQLGSVCIGSTLVPLIVLFRGT- 299
Query: 387 XXXXXXEGEDEFMFCCAR-------CCLGVMESIFRNGNSWAYVQIAAYGRGFVMASQET 439
+ CC R C + I GN + +V + A+ +G AS +T
Sbjct: 300 ------------IRCCNRDIYASTPGCNWIANHIILGGNRYGFVHVGAHNKGLRQASSDT 347
Query: 440 WALFEK-EDMVAVVDSDITSSICFLTGVCSGSMCVIVVAAWTHTVHKSFTATLSLLTFFI 498
W F + ++D DITSSICF + + G++ + W + K L++ F I
Sbjct: 348 WRRFRTIPEFEQLIDFDITSSICFFSAMGIGAIAALTAGVWELLIDKDHYFELTIYAFII 407
Query: 499 GYLLTRIAMAVPHACVSCYYVCYAENPENRLFDKTIK---DRQALLETRREM 547
GY + R++ A ACV YYV Y+E+P+N FD TI +RQ + + +RE+
Sbjct: 408 GYFVGRVSSAWLQACVMGYYVAYSEDPQNDRFDDTIPQRIERQKIEKAKREV 459
>AT1G25500.2 | Symbols: | Plasma-membrane choline transporter
family protein | chr1:8955437-8957793 REVERSE LENGTH=488
Length = 488
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 185/426 (43%), Gaps = 34/426 (7%)
Query: 124 VTLNSRKYTNRISLFLFVVHMF---IAIALVGFLVFKGVQGLILE--SESMKRKKKNMLK 178
V SR + + +FV+H+ +A++G F+ L ++ ++ K + +
Sbjct: 37 VVRESRHWHDVFWSAIFVIHLICLGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTE 96
Query: 179 FFLPQVEAASFMSIILAFIWQQAIRKWPTFM----VHFILWFTFVMSLAAGILLICFQKP 234
+ P A + + ++++W + + M VH + + V+S+ +CF
Sbjct: 97 DYWPLYAVAGGIGVFISWVWSLLLGSYANEMMKVSVHILTTYLAVVSV------LCFWCR 150
Query: 235 PTDGVGVCFIAFAIGN---GLYACWASNRIKFCCKILNLSLQPLSKFPDLNKPTYYMLGA 291
G AFA+G+ LY +R+ F +L +L+ + P + +
Sbjct: 151 LFFWGG----AFAVGSLLQFLYVISVIDRLPFTMLVLRKALKLVWGLPKVIMVAHAFTVV 206
Query: 292 GFLWISLWSLAVIG----SLNFYFPPLVILALGLSLAWTTEVMRNVVNITVSRVIALYYL 347
LW+SLWS G S+ +++ L +SL WT V+ N V++ VS ++
Sbjct: 207 MLLWMSLWSFGAAGVVASSMGDEGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFHVLF 266
Query: 348 RGMQSSTQFCF-------LR-ALTRNLGSACLGSLFVPAIEXXXXXXXXXXXXEGEDEFM 399
Q + LR A+T + GS C GSLF AI +E +
Sbjct: 267 HCGQEESSSLPPSSLVDSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKICGNECL 326
Query: 400 FCCARCCLGVMESIFRNGNSWAYVQIAAYGRGFVMASQETWALFEKEDMVAVVDSDITSS 459
CC ++E++ R N +AYVQIA YG+GF ++++ W LF+ + A+V D + +
Sbjct: 327 LCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNKSARDAWELFQSTGVEALVAYDCSGA 386
Query: 460 ICFLTGVCSGSMCVIVVAAWTHTVHKSFTATLSLLTFFIGYLLTRIAMAVPHACVSCYYV 519
+ + + G + + W + ++ +G +L + M V + V+ Y+
Sbjct: 387 VLLMGTIFGGLITGSCIGIWAWIKYSDRVIMVASTAMLMGMVLVGLGMVVVESAVTSIYI 446
Query: 520 CYAENP 525
C+AE+P
Sbjct: 447 CFAEDP 452
>AT1G25500.3 | Symbols: | Plasma-membrane choline transporter
family protein | chr1:8955437-8957294 REVERSE LENGTH=430
Length = 430
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 164/379 (43%), Gaps = 29/379 (7%)
Query: 166 SESMKRKKKNMLKFFLPQVEAASFMSIILAFIWQQAIRKWPTFM----VHFILWFTFVMS 221
++ K + + + P A + + ++++W + + M VH + + V+S
Sbjct: 26 TQGFLENHKGLTEDYWPLYAVAGGIGVFISWVWSLLLGSYANEMMKVSVHILTTYLAVVS 85
Query: 222 LAAGILLICFQKPPTDGVGVCFIAFAIGN---GLYACWASNRIKFCCKILNLSLQPLSKF 278
+ +CF G AFA+G+ LY +R+ F +L +L+ +
Sbjct: 86 V------LCFWCRLFFWGG----AFAVGSLLQFLYVISVIDRLPFTMLVLRKALKLVWGL 135
Query: 279 PDLNKPTYYMLGAGFLWISLWSLAVIG----SLNFYFPPLVILALGLSLAWTTEVMRNVV 334
P + + LW+SLWS G S+ +++ L +SL WT V+ N V
Sbjct: 136 PKVIMVAHAFTVVMLLWMSLWSFGAAGVVASSMGDEGRWWLLVVLSVSLFWTGAVLCNTV 195
Query: 335 NITVSRVIALYYLRGMQSSTQFCF-------LR-ALTRNLGSACLGSLFVPAIEXXXXXX 386
++ VS ++ Q + LR A+T + GS C GSLF AI
Sbjct: 196 HVIVSGMVFHVLFHCGQEESSSLPPSSLVDSLRYAVTTSFGSICYGSLFTAAIRTLRWEI 255
Query: 387 XXXXXXEGEDEFMFCCARCCLGVMESIFRNGNSWAYVQIAAYGRGFVMASQETWALFEKE 446
+E + CC ++E++ R N +AYVQIA YG+GF ++++ W LF+
Sbjct: 256 RGFRSKICGNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNKSARDAWELFQST 315
Query: 447 DMVAVVDSDITSSICFLTGVCSGSMCVIVVAAWTHTVHKSFTATLSLLTFFIGYLLTRIA 506
+ A+V D + ++ + + G + + W + ++ +G +L +
Sbjct: 316 GVEALVAYDCSGAVLLMGTIFGGLITGSCIGIWAWIKYSDRVIMVASTAMLMGMVLVGLG 375
Query: 507 MAVPHACVSCYYVCYAENP 525
M V + V+ Y+C+AE+P
Sbjct: 376 MVVVESAVTSIYICFAEDP 394
>AT1G25500.1 | Symbols: | Plasma-membrane choline transporter
family protein | chr1:8955595-8957793 REVERSE LENGTH=432
Length = 432
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 161/370 (43%), Gaps = 34/370 (9%)
Query: 124 VTLNSRKYTNRISLFLFVVHMF---IAIALVGFLVFKGVQGLILE--SESMKRKKKNMLK 178
V SR + + +FV+H+ +A++G F+ L ++ ++ K + +
Sbjct: 37 VVRESRHWHDVFWSAIFVIHLICLGFVLAVLGLNRFRISDRLNIDRYTQGFLENHKGLTE 96
Query: 179 FFLPQVEAASFMSIILAFIWQQAIRKWPTFM----VHFILWFTFVMSLAAGILLICFQKP 234
+ P A + + ++++W + + M VH + + V+S+ +CF
Sbjct: 97 DYWPLYAVAGGIGVFISWVWSLLLGSYANEMMKVSVHILTTYLAVVSV------LCFWCR 150
Query: 235 PTDGVGVCFIAFAIGN---GLYACWASNRIKFCCKILNLSLQPLSKFPDLNKPTYYMLGA 291
G AFA+G+ LY +R+ F +L +L+ + P + +
Sbjct: 151 LFFWGG----AFAVGSLLQFLYVISVIDRLPFTMLVLRKALKLVWGLPKVIMVAHAFTVV 206
Query: 292 GFLWISLWSLAVIG----SLNFYFPPLVILALGLSLAWTTEVMRNVVNITVSRVIALYYL 347
LW+SLWS G S+ +++ L +SL WT V+ N V++ VS ++
Sbjct: 207 MLLWMSLWSFGAAGVVASSMGDEGRWWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFHVLF 266
Query: 348 RGMQSSTQFCF-------LR-ALTRNLGSACLGSLFVPAIEXXXXXXXXXXXXEGEDEFM 399
Q + LR A+T + GS C GSLF AI +E +
Sbjct: 267 HCGQEESSSLPPSSLVDSLRYAVTTSFGSICYGSLFTAAIRTLRWEIRGFRSKICGNECL 326
Query: 400 FCCARCCLGVMESIFRNGNSWAYVQIAAYGRGFVMASQETWALFEKEDMVAVVDSDITSS 459
CC ++E++ R N +AYVQIA YG+GF ++++ W LF+ + A+V D + +
Sbjct: 327 LCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNKSARDAWELFQSTGVEALVAYDCSGA 386
Query: 460 ICFLTGVCSG 469
+ + + G
Sbjct: 387 VLLMGTIFGG 396