Miyakogusa Predicted Gene

Lj3g3v0824610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824610.1 tr|B9MT90|B9MT90_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_739338 PE=4
SV=1,75.89,1.99965e-42,DnaJ,Heat shock protein DnaJ, N-terminal; no
description,Heat shock protein DnaJ, N-terminal; UNCHAR,CUFF.41496.1
         (107 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03030.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   132   4e-32
AT3G09700.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   131   9e-32
AT2G35795.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   130   2e-31

>AT5G03030.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr5:708479-709513 REVERSE LENGTH=112
          Length = 112

 Score =  132 bits (333), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 65/112 (58%), Positives = 76/112 (67%), Gaps = 5/112 (4%)

Query: 1   MATPLMXXXXXXXXXXXXXXXXXXWHNLRNLPK-----KFYEGGFQATMTRREAALILGV 55
           MATP++                  W   +  P+     +FYEGGFQ++MTRREAALILGV
Sbjct: 1   MATPMIAGAAVAAAAVAGRYGILAWQAFKARPRVPRMRRFYEGGFQSSMTRREAALILGV 60

Query: 56  RERTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEAKDMLLGKPKGGGSAF 107
           RE    DK+KEAH+RVM+ANHPDAGGSHYLASKINEAKDM+LGK    GSAF
Sbjct: 61  RESVVADKVKEAHRRVMVANHPDAGGSHYLASKINEAKDMMLGKSNNSGSAF 112


>AT3G09700.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:2975094-2976139 REVERSE LENGTH=112
          Length = 112

 Score =  131 bits (330), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 61/75 (81%), Positives = 67/75 (89%)

Query: 33  KKFYEGGFQATMTRREAALILGVRERTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEA 92
           +KFYEGGFQATM RREAALILGVRE    +K+KEAH+RVM+ANHPDAGGSHYLASKINEA
Sbjct: 38  RKFYEGGFQATMNRREAALILGVRESVAAEKVKEAHRRVMVANHPDAGGSHYLASKINEA 97

Query: 93  KDMLLGKPKGGGSAF 107
           KDM+LGK K  GSAF
Sbjct: 98  KDMMLGKTKNSGSAF 112


>AT2G35795.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr2:15042321-15043334 FORWARD LENGTH=112
          Length = 112

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/112 (57%), Positives = 75/112 (66%), Gaps = 5/112 (4%)

Query: 1   MATPLMXXXXXXXXXXXXXXXXXXWHNLRNLP-----KKFYEGGFQATMTRREAALILGV 55
           MATP +                  W   +  P     KKFYEGGFQ TMT+REAALILGV
Sbjct: 1   MATPFIAGVAVAATALAGRYGIQAWQAFKARPPRPKIKKFYEGGFQPTMTKREAALILGV 60

Query: 56  RERTPTDKIKEAHKRVMIANHPDAGGSHYLASKINEAKDMLLGKPKGGGSAF 107
           RE    +K+KEAH++VM+ANHPDAGGSH+LASKINEAKD++LGK K  GSAF
Sbjct: 61  RESVAAEKVKEAHRKVMVANHPDAGGSHFLASKINEAKDVMLGKTKNSGSAF 112