Miyakogusa Predicted Gene

Lj3g3v0824590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0824590.1 Non Chatacterized Hit- tr|D8RU93|D8RU93_SELML
Putative uncharacterized protein OS=Selaginella
moelle,41.35,0.000000000000002,BIOGENESIS OF LYSOSOME-RELATED
ORGANELLES COMPLEX 1 SUBUNIT 2,NULL; PHYTOENE DEHYDROGENASE,NULL;
BLO,CUFF.41494.1
         (128 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49550.1 | Symbols: BLOS2 | Putative homolog of mammalian BLO...   164   1e-41

>AT5G49550.1 | Symbols: BLOS2 | Putative homolog of mammalian BLOC-1
           Subunit 2. Protein - protein interaction with BLOS1. |
           chr5:20106702-20107156 REVERSE LENGTH=127
          Length = 127

 Score =  164 bits (415), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 97/111 (87%)

Query: 15  DELAESLNDLFTSISTMIKSELQGTNNHLELLEKMNLRVAEEYKGFGDLASGLRVFVEQL 74
           D+LAESL +LFTS+S+M+KSELQGTNNHL+LLEKMNLRVA EY   GD+A+GLRVF EQ+
Sbjct: 6   DDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAEQM 65

Query: 75  KCKSGSFNEYVEQIDAIEKQVTEFEAVVSMLDKYVALLESRVLSVYQHKTH 125
           K KSG  +E+V Q+DAIEKQV+EFEAV+S+LD+YV++LES++ + Y+H  H
Sbjct: 66  KSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKIRAEYRHPHH 116