Miyakogusa Predicted Gene
- Lj3g3v0821140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0821140.1 tr|G7J1P0|G7J1P0_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,81.86,0,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.41462.1
(731 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 881 0.0
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 178 1e-44
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 2e-43
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 1e-41
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 3e-41
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 164 3e-40
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 2e-39
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 4e-39
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 159 5e-39
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 159 7e-39
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 9e-39
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 157 3e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 5e-38
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 154 2e-37
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 4e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 8e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 9e-37
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 150 4e-36
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 6e-36
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 6e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 7e-36
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 9e-36
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 9e-36
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 9e-36
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-35
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 1e-35
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 2e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 5e-35
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 7e-35
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 2e-34
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 3e-34
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 4e-34
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 5e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 5e-34
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 9e-34
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 6e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 1e-32
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 2e-32
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 3e-32
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 6e-32
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 6e-32
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 6e-32
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 7e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 135 9e-32
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 1e-31
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 3e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 133 5e-31
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 7e-31
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 131 1e-30
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 129 7e-30
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 4e-29
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 7e-29
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 7e-29
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 125 1e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 122 1e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 121 1e-27
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 4e-27
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 6e-27
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 118 2e-26
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-26
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 2e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 114 2e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 113 4e-25
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 1e-22
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 105 1e-22
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 103 5e-22
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 103 6e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 98 2e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 97 3e-20
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 96 7e-20
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 94 3e-19
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 4e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 5e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 80 6e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 79 8e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 5e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 8e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 74 5e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 2e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 72 2e-12
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 72 2e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 71 3e-12
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 6e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 67 4e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 66 1e-10
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 65 2e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 65 2e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 65 2e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 64 5e-10
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 64 5e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 6e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 63 6e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 63 8e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 9e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 62 2e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 59 9e-09
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-08
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 58 3e-08
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 57 4e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 57 5e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 6e-08
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 7e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 3e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 5e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 53 6e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 53 9e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 53 9e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 9e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 53 9e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 53 1e-06
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 4e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 51 4e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 50 4e-06
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 49 9e-06
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/713 (59%), Positives = 546/713 (76%), Gaps = 7/713 (0%)
Query: 19 FFYGHRKPAQNRPTVRGGLFSNRQTLPPSKPR-KTTHXXXXXXXXXXKWDPHFLPHRNXX 77
FF+GHRKP+QNRPTV GGLFSNRQ++P P+ ++ KWDP +
Sbjct: 18 FFHGHRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDLRKWDPE----THLP 73
Query: 78 XXXXXXXXXXXXXXXXXXXXIARFILDAFRKNGYKWGPPVVTELSKLRRVTPSLVAEVLK 137
IARF+LDAFRKN WGP VV+EL+KLRRVTPS+VAEVLK
Sbjct: 74 PPSPPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLK 133
Query: 138 VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSE 197
+ + ++ KFFHWA KQKGY H+FA+YNAFAYC+NRN H RAADQLPELMDSQG+PPSE
Sbjct: 134 LGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSE 193
Query: 198 KQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYD 257
KQFEILIRMH+D RGLRVY+VYEKM+ KFG KPRVFLYNRIMDAL++ G+ DLAL+VY+
Sbjct: 194 KQFEILIRMHADNRRGLRVYYVYEKMK-KFGFKPRVFLYNRIMDALVKNGYFDLALAVYE 252
Query: 258 DFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG 317
DFKEDGL EE TFM+LVKGLC+AGRI+EMLE+L RMRE LC+PDVFAYT +++ LV +G
Sbjct: 253 DFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 312
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
NLD LRVW+EM++D ++PDVMAY T++ GL GRVE GY LF EMK K LIDR IY
Sbjct: 313 NLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYR 372
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQE 437
L+E FVA KV + +L +DLV SGY AD+GIYN +I+GLC++N+ +KA+KLFQV I+E
Sbjct: 373 VLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEE 432
Query: 438 GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF-VEKKGPIMA 496
LEPDF ++ P++V Y R+ +F +L+++ +LG+PV D L +FF + +++ MA
Sbjct: 433 ELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMA 492
Query: 497 LEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCH 556
L+VF LK KG+ SV +YNILM++L+K+G+++K+LSLF E+ +PDS SYSIAI C
Sbjct: 493 LDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCF 552
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
V+ G++K AC H KIIEMSC+PSIAAY LTKGLC+IGEID M+LVR+CLGNV SGPM
Sbjct: 553 VEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPM 612
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
EF Y+LTV H CK ++AEKV+ V++EM Q+G V+ A+ISGM K+GTI+ AR+VF+
Sbjct: 613 EFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFT 672
Query: 677 NLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFFGLESKLKSKGCKLL 729
L++RK++TE+D +VY+E LI+ KKKTADLV+SG+KFFGLESKL++KGC+LL
Sbjct: 673 ELKKRKVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFFGLESKLRAKGCRLL 725
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/633 (22%), Positives = 268/633 (42%), Gaps = 30/633 (4%)
Query: 99 ARFILDAFRKNGYKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKG 157
AR I DA +G L + R +++ SLV EVL++ P+ FF WA +Q G
Sbjct: 101 ARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIG 160
Query: 158 YHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY 217
Y H YNA + R++ + ++ + + K + +L+R H G
Sbjct: 161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 220
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
++++ F +P YN ++ A ++ LD A ++ + L + T
Sbjct: 221 EELGRLKD-FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS 279
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC+ G+ E L ++ + PD YT L+ L + + M+ P+
Sbjct: 280 LCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ Y+T++ G N ++ + M +G I+ SLV ++ + LLK
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 398 DLVSSGYRADLGIYNNLIEGLC------NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
+V G+ +YN LI +C N + + A K + + G+ + ++V
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 452 LYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS 510
A + E + ++++M GF P ++ + +A +F +K G V+
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 511 -VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
V Y I++DS K G +++A F+E+ P+ +Y+ I ++ ++ A E
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG---------------NVTSG 614
++ C+P+I Y L G CK G++++A + G + +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 615 PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKV 674
P Y + CKS+ E+ +L+ M +GC P +V A+I G+CK G ++EA++V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 675 FSNLRERKLLTESDTIVYDEFLIDHMKKKTADL 707
+ + E + Y + + K K DL
Sbjct: 697 KTEMSEHGF--PATLYTYSSLIDRYFKVKRQDL 727
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/544 (22%), Positives = 223/544 (40%), Gaps = 68/544 (12%)
Query: 171 CMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVK 230
C+N+ R L +M +G PS K F L+ + +G Y + +KM K G
Sbjct: 347 CLNKKQLGRCKRVL-NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV-KCGHM 404
Query: 231 PRVFLYNRIMDAL------IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
P +YN ++ ++ + LDLA Y + G+ ++ + LC AG+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
++ V+ M + PD Y+ ++ L ++ ++EEMK+ + DV Y +
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
+ G +E+ F EM+ G + Y +L+ +++ KV +L + ++S G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTI----------------QEGLEPDFLSVKP 448
++ Y+ LI+G C + EKA ++F+ P+ ++
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
LL + ++ R+E KLL M G E
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGC------------------------------EPNQ 674
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
+ +Y+ L+D L KVG++ +A + E++ ++YS I + + A +
Sbjct: 675 I---VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA-----MMLVRDCLGNVTSGPMEFMYSLT 623
+K++E SC P++ Y + GLCK+G+ DEA MM + C NV + Y+
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVT------YTAM 785
Query: 624 VIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
+ E + +L M +G P V +I CK G ++ A + +++
Sbjct: 786 IDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW 845
Query: 684 LTES 687
T +
Sbjct: 846 PTHT 849
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 216/518 (41%), Gaps = 56/518 (10%)
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
R AG+ + + V +M + G P Y+++++ L ++LA ++++ K GL
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ T+ ++V C+AG I++ + MRE C P+V YT L+ + +
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++E M + P+++ Y+ +I G G+VE+ +F+ M + D +Y
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY-------- 626
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
K + R ++ Y L++G C ++ E+A KL EG EP+ +
Sbjct: 627 -----------FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFP-VIDDLARFFSIFVEKKGPIMALEVFSYL 503
L+ + +++ ++ +M + GFP + + + + K +A +V S +
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 504 KEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
E +V IY ++D L KVG+ +A L + +P+ +Y+ I +G+I
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR----------------- 605
+ E ++ P+ Y+ L CK G +D A L+
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 606 ---------------DCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
D +G + P +Y L + + K+ E + +L E+
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 651 GNVVCS--AVISGMCKYGTIEEARKVFSNLRERKLLTE 686
+ + ++I +C +E A ++FS + ++ ++ E
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 203/468 (43%), Gaps = 52/468 (11%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++ G N +Y A + + A++L E M S+G P+ + LI H AG+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 214 LRVYHVYEKMRNKFGV---------------KPRVFLYNRIMDALIRTGHLDLALSVYDD 258
+ ++E+M V +P V Y ++D ++ ++ A + D
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 259 FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN 318
+G + ++ + L+ GLC+ G++DE EV M E ++ Y+ L+
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
D +V +M ++ P+V+ Y +I GL G+ +E Y L + M+ KG + Y +
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
+++ F + K+ +LL+ + S G + Y LI+ C + AH L + Q
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 439 LEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE 498
+ K +E F K + +E LG ++D++ + + P ++
Sbjct: 845 WPTHTAGYR---------KVIEGFNK--EFIESLG--LLDEIGQ------DDTAPFLS-- 883
Query: 499 VFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEIN--GANLKPDSFSYSIAILCH 556
+Y +L+D+L K ++ AL L +E+ A L S +Y+ I
Sbjct: 884 --------------VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+++ A + +++ + IP + ++ L KGL + +I EA++L+
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L ++M+ +G P+ + +I G+ + E+M +K GV P Y ++
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLI 821
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE---K 297
D + G LD+A ++ ++ K+ + +++G + E +E LG + E
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-----EFIESLGLLDEIGQD 876
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK--KDRVEPDVMAYATIITGLSNGGRVE 355
P + Y +L+ L+ L+ LR+ EE+ + Y ++I L +VE
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
+ LF EM KG + + + SL++ +K+ LL D +S
Sbjct: 937 TAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL-LLLDFIS 981
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/610 (24%), Positives = 261/610 (42%), Gaps = 39/610 (6%)
Query: 122 SKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAA 181
+ ++TP + ++L++ N + S + F W Q GY H+F Y + N +
Sbjct: 71 NSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTI 130
Query: 182 DQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMD 241
D+L M +G E F ++R + AG + + +MRN + +P YN +++
Sbjct: 131 DRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE 190
Query: 242 ALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
L+ +A +V+ D + TF V++K C ID L +L M + C P
Sbjct: 191 ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
+ Y L+ L ++ L++ EEM PD + +I GL R+ E +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL-------------------------- 395
M +G D YG L+ + +V A DL
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 396 -----LKDLVSS-GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
L D+V+S G D+ YN+LI G A ++ +G +P+ S L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
+ + + +++ Y +L +M G P S F ++ A+E+F + KG
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG- 489
Query: 509 VSVDIY--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
D+Y N L+ L +V E+K AL L ++ + ++ +Y+ I + GEIK+A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH 626
+ N+++ Y L KGLC+ GE+D+A L L + P ++ +
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILING 608
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
C+S E+ + EM+ +G P V +++I+G+C+ G IE+ +F L+ +
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI--P 666
Query: 687 SDTIVYDEFL 696
DT+ ++ +
Sbjct: 667 PDTVTFNTLM 676
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/550 (21%), Positives = 228/550 (41%), Gaps = 44/550 (8%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
F SYN + N H+ A + M S+ PP+ F ++++ +
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
M K G P +Y ++ +L + ++ AL + ++ G + TF ++ GLC+
Sbjct: 241 RDM-TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
RI+E +++ RM + PD Y L+ L G +D ++ + K P+++
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 341 YATIITGLSNGGRVEEGYVLFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
+ T+I G GR+++ + +M S G + D Y SL+ + VG ++L D+
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
+ G + ++ Y L++G C L K ++A+ + +GL+P+ + L+ + + R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 460 ENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI----- 513
++ ++M + G P + S E AL + + +G V+ +
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 514 -------------------------------YNILMDSLHKVGEMKKALSLFDEINGANL 542
YN L+ L + GE+ KA SLF+++
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
P + S +I I G +++A E +++ P I + L GLC+ G I++ +
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 603 LVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
+ R L P ++ + CK +L+E ++ G P + S ++ +
Sbjct: 656 MFRK-LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Query: 663 CKYGTIEEAR 672
T++ R
Sbjct: 715 IPQETLDRRR 724
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 254/549 (46%), Gaps = 8/549 (1%)
Query: 136 LKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPP 195
L+ Q + + + + F+ A K+ + A Y + R+ ++ E M S
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 196 SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSV 255
F ILI ++ + V + M ++FG+KP YNR+++ L+ L L
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 256 YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVP 315
+ G+ + TF VL+K LC+A ++ + +L M PD +T +++ +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 316 QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK-GHLIDRA 374
+G+LDG LR+ E+M + ++ I+ G GRVE+ +EM ++ G D+
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
+ +LV V +++ ++ GY D+ YN++I GLC L + ++A ++
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKK 491
I P+ ++ L+ + ++E +L + + G ++ D+ F S+ +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG--ILPDVCTFNSLIQGLCLTR 414
Query: 492 GPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
+A+E+F ++ KG + YN+L+DSL G++ +AL++ ++ + +Y+
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 551 IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGN 610
I + ++A E +++ + Y L GLCK +++A L+ D +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM-DQMIM 533
Query: 611 VTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEE 670
P ++ Y+ + H C+ D +K ++ M GC P V +ISG+CK G +E
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 671 ARKVFSNLR 679
A K+ +++
Sbjct: 594 ASKLLRSIQ 602
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/510 (22%), Positives = 216/510 (42%), Gaps = 76/510 (14%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR---G 213
G + +++N + R + R A + E M S G P EK F +++ + + G
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 214 LRV--------------------------------YHVYEKMRNKFGVKPRVFLYNRIMD 241
LR+ + ++M N+ G P + +N +++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 242 ALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
L + GH+ A+ + D ++G D + T+ ++ GLC+ G + E +EVL +M + C P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 302 DVFAYTVLV----------------RILVPQGNL-DGC------------------LRVW 326
+ Y L+ R+L +G L D C + ++
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
EEM+ EPD Y +I L + G+++E + K+M+ G Y +L++ F
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
NK ++ ++ G + YN LI+GLC + E A +L I EG +PD +
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKE 505
LL + ++ ++Q M G P I S + +A ++ ++
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 506 KGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGAN-LKPDSFSYSIAI--LCHVDLGE 561
KG ++ YN ++ L + + +A++LF E+ N PD+ SY I LC+ G
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG-GP 662
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
I++A + +++E +P ++ L +GL
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
V +N+L+ +L + +++ A+ + +++ L PD +++ + +++ G++ A
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
+++E C S + + G CK G +++A+ +++ P ++ ++ V CK+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+ I +++ M+Q+G P ++VISG+CK G ++EA +V + R +T+
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CSPNTV 366
Query: 691 VYDEFL 696
Y+ +
Sbjct: 367 TYNTLI 372
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/437 (20%), Positives = 179/437 (40%), Gaps = 75/437 (17%)
Query: 309 LVRILVPQGNLDGCLRVWE-EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L+ L Q + LR++ KK P+ Y I+ L G ++ + ++MKS
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS--------GYRADLGIYNNLIEGLC 419
+ + + L+ES+ A F+L +++S G + D YN ++ L
Sbjct: 113 RCEMGTSTFLILIESY-------AQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165
Query: 420 NLNKF---EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
+ N E +H V G++PD + L+ A ++ +L+ M G +
Sbjct: 166 DGNSLKLVEISHAKMSVW---GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG--L 220
Query: 477 IDDLARFFSI---FVEKKGPIMALEVFSYLKEKG--YVSVDIYNILMDSLHKVGEMKKAL 531
+ D F ++ ++E+ AL + + E G + +V + N+++ K G ++ AL
Sbjct: 221 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV-NVIVHGFCKEGRVEDAL 279
Query: 532 SLFDEI-NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
+ E+ N PD ++++ + G +K A E + +++ P + Y + G
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 591 LCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
LCK+G + ++ + VL++M+ + C P
Sbjct: 340 LCKLG------------------------------------EVKEAVEVLDQMITRDCSP 363
Query: 651 GNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMS 710
V + +IS +CK +EEA ++ L + +L D ++ + + + M
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGIL--PDVCTFNSLIQGLCLTRNHRVAME 421
Query: 711 GLKFFGLESKLKSKGCK 727
L +++SKGC+
Sbjct: 422 ------LFEEMRSKGCE 432
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 229/524 (43%), Gaps = 51/524 (9%)
Query: 175 NNHHRAADQLPEL---------MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRN 225
NNH R + EL M G P LIR G+ + + E +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
G P V YN ++ + G ++ ALSV D + + VT+ +++ LC +G++
Sbjct: 166 S-GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ +EVL RM ++ C PDV YT+L+ + +++ +EM+ PDV+ Y ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
G+ GR++E +M S G + + ++ S + + LL D++ G+
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+ +N LI LC +A + + Q G +P+ LS PLL + + K+M+ +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 466 LQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHK 523
L++M G +P I + + A+E+ + L KG V I YN ++D L K
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
G+ KA+ L DE+ +LKPD+ +YS
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYS--------------------------------- 488
Query: 584 YKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
L GL + G++DEA+ + + P ++ ++ CKS ++ I L M
Sbjct: 489 --SLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 644 MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTES 687
+ +GC P + +I G+ G +EA ++ + L + L+ +S
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 219/535 (40%), Gaps = 88/535 (16%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDA-GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
++S G ++FE L +S++ G G H Y + + F ++ N + ++RT
Sbjct: 63 VESSGLNGRAQKFETLSSGYSNSNGNG----H-YSSVNSSFALED--VESNNHLRQMVRT 115
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGL---------------------------- 278
G L+ ++ G + + L++G
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 279 -------CQAGRIDEMLEVLGRMR--------------------------------EKLC 299
C+AG I+ L VL RM ++ C
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
PDV YT+L+ + +++ +EM+ PDV+ Y ++ G+ GR++E
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+M S G + + ++ S + + LL D++ G+ + +N LI LC
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG-FPVID 478
+A + + Q G +P+ LS PLL + + K+M+ + L++M G +P I
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEI 537
+ + A+E+ + L KG V I YN ++D L K G+ KA+ L DE+
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
+LKPD+ +YS + G++ +A + ++ M P+ + + GLCK +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 598 DEAM-----MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG 647
D A+ M+ R C N TS Y++ + A++ + +LNE+ +G
Sbjct: 536 DRAIDFLVFMINRGCKPNETS------YTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 1/321 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ +G + +YN + + A + M S G P+ I++R GR
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ + M K G P V +N +++ L R G L A+ + + + G +++
Sbjct: 326 MDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G C+ ++D +E L RM + C PD+ Y ++ L G ++ + + ++
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
P ++ Y T+I GL+ G+ + L EM++K D Y SLV KV
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+ G R + +N+++ GLC + ++A I G +P+ S L+
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 454 AEAKRMENFYKLLQQMEKLGF 474
A + +LL ++ G
Sbjct: 565 AYEGMAKEALELLNELCNKGL 585
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 168/397 (42%), Gaps = 37/397 (9%)
Query: 341 YATIITGLSNG------GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+ T+ +G SN V + L ++++S HL G L E GF
Sbjct: 75 FETLSSGYSNSNGNGHYSSVNSSFAL-EDVESNNHLRQMVRTGELEE----------GFK 123
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L+++V G D+ LI G C L K KA K+ ++ G PD ++ ++ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF--VEKKGPI-MALEVFS-YLKEKGYVS 510
+A + N +L +M V D+ + +I + G + A+EV L+ Y
Sbjct: 184 KAGEINNALSVLDRMS-----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
V Y IL+++ + + A+ L DE+ PD +Y++ + G + +A + N
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
+ C P++ + + + +C G +A L+ D L S P +++ + C+
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS-PSVVTFNILINFLCRK 357
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+ I +L +M Q GC P ++ + ++ G CK ++ A + + R D +
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY--PDIV 415
Query: 691 VYDEFLIDHMKK-KTADLVMSGLKFFGLESKLKSKGC 726
Y+ L K K D V + ++L SKGC
Sbjct: 416 TYNTMLTALCKDGKVEDAVE-------ILNQLSSKGC 445
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 153/667 (22%), Positives = 289/667 (43%), Gaps = 96/667 (14%)
Query: 113 WGPPVVTELSKLRRVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
W P + +L L + P V VL +++ +P L+FKFF W+ + G+ H+ SY A+
Sbjct: 93 WDDPGLEKLFDLT-LAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHI 151
Query: 172 M-NRNNHHRAADQLPELMDSQGK--------------PPSEKQFEILIRMHSDAG----- 211
+ ++ A L E++ S+ P F+ L + D G
Sbjct: 152 LFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEA 211
Query: 212 ----RGLRVYHVYEKMRN------------------KF-------GVKPRVFLYNRIMDA 242
++ + V+ K R+ +F G +P VF YN ++D
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271
Query: 243 LIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+ + G ++ A ++++ K GL + VT+ ++ G + GR+D+ + M++ C PD
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
V Y L+ G L L + EMK + ++P+V++Y+T++ G +++ +
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
+M+ G + + Y SL+++ + + F L +++ G ++ Y LI+GLC+
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
+ ++A +LF G+ P+ S L+ + +AK M+ +LL +++ G + DL
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG--IKPDLL- 508
Query: 483 FFSIFVEKKGPIMALE----VFSYLKEKGYVSVD-IYNILMDSLHKVGEMKKALSLFDEI 537
+ F+ + +E V + +KE G + IY LMD+ K G + L L DE+
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 538 NGANLKPDSFSYSIAI--LCHVDL----------------------------------GE 561
+++ ++ + I LC L +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
++ A ++++ +P AY L G K G + EA+ L RD + + Y+
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL-RDKMAEIGMKLDLLAYT 687
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
V N +K L EM+ +G P V+C +V+ + G I+EA ++ S L +
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Query: 682 KLLTESD 688
+LLT +
Sbjct: 748 QLLTSDN 754
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/611 (23%), Positives = 263/611 (43%), Gaps = 78/611 (12%)
Query: 122 SKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAA 181
S + ++PS V+ + + +P + F HW + Y H+ SY + + N +
Sbjct: 83 SMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 142
Query: 182 DQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR--NKFGVKPRVFL--YN 237
++ LM I+ G L V + KM +F +K ++ + YN
Sbjct: 143 FKIRLLM---------------IKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYN 187
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
++++L R G +D VY + ED + T+ +V G C+ G ++E + + ++ E
Sbjct: 188 TLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA 247
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
PD F YT L+ + +LD +V+ EM + +AY +I GL R++E
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
LF +MK Y L++S + +L+K++ +G + ++ Y LI+
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
LC+ KFEKA +L +++GL P+ ++ L+ Y + +E+ +++ ME +
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK---L 424
Query: 478 DDLARFFSIFVE---KKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSL 533
R ++ ++ K A+ V + + E+ + V YN L+D + G A L
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
+N L PD ++Y+ I +++AC+ + + + P++ Y L G CK
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
G++DEA ++ L +M+ + C P ++
Sbjct: 545 AGKVDEAHLM------------------------------------LEKMLSKNCLPNSL 568
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKLL-------TESDTIVYDEFL----IDHMKK 702
+A+I G+C G ++EA L E K++ +DTI+ L DH
Sbjct: 569 TFNALIHGLCADGKLKEA-----TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 703 KTADLVMSGLK 713
+ ++ SG K
Sbjct: 624 RFQQMLSSGTK 634
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 218/512 (42%), Gaps = 24/512 (4%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M+ G P+ + +LI + + + +M K G+ P V YN +++ + G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRG 407
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
++ A+ V + + L T+ L+KG C++ + + + VL +M E+ PDV Y
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYN 466
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L+ GN D R+ M + PD Y ++I L RVEE LF ++ K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G + +Y +L++ + KV +L+ ++S + +N LI GLC K ++A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSI 486
L + ++ GL+P + L+ + ++ Y QQM G P F
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 487 FVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKP 544
+ + + A ++ + ++E G VS D+ Y+ L+ +G+ A + + +P
Sbjct: 647 YCREGRLLDAEDMMAKMRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 545 DSFSYSIAI-----------------LCHV-DLGEIKQACECHNKIIEMSCIPSIAAYKC 586
++ I LC + ++ E E K++E S P+ +Y+
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 587 LTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ 646
L G+C++G + A + N P E +++ + CK + V+++M+
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICV 825
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
G P C +I G+ K G E VF NL
Sbjct: 826 GHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 217/509 (42%), Gaps = 33/509 (6%)
Query: 161 NFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYH 218
N +YN YC ++N H+A L ++++ + P + LI +G Y
Sbjct: 427 NTRTYNELIKGYC--KSNVHKAMGVLNKMLERK-VLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
+ M ++ G+ P + Y ++D+L ++ ++ A ++D ++ G++ V + L+ G
Sbjct: 484 LLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+AG++DE +L +M K C P+ + L+ L G L + E+M K ++P V
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
+I L G + Y F++M S G D Y + ++++ ++ D++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD---FLS-VKPLLVL-Y 453
+ +G DL Y++LI+G +L + A + + G EP FLS +K LL + Y
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 454 AEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
+ K E + M + F VE ++ V K
Sbjct: 723 GKQKGSEPELCAMSNMME------------FDTVVELLEKMVEHSVTPNAKS-------- 762
Query: 514 YNILMDSLHKVGEMKKALSLFDEIN-GANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
Y L+ + +VG ++ A +FD + + P ++ + C L + +A + + +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
I + +P + + K L GL K GE + + ++ L E + + + K
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL-QCGYYEDELAWKIIIDGVGKQGL 881
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISG 661
E + N M + GC + S +I G
Sbjct: 882 VEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 211/469 (44%), Gaps = 43/469 (9%)
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
+ +RV + EK FG +P VF YN +++ + +D A V D + + VT+
Sbjct: 142 KAVRVMEILEK----FG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
+++ LC G++D L+VL ++ C+P V YT+L+ + +G +D L++ +EM
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
++PD+ Y TII G+ G V+ + + + ++ KG D Y L+ + + K
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
G L+ + S ++ Y+ LI LC K E+A L ++ ++GL PD S PL+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 452 LYAEAKRMENFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV- 509
+ R++ + L+ M G P I + + + ALE+F L E G
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+ YN + +L G+ +AL + E+ + PD +Y+ I C
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC-------------- 482
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
LC+ G +DEA L+ D + + P Y++ ++ CK
Sbjct: 483 ---------------------LCREGMVDEAFELLVD-MRSCEFHPSVVTYNIVLLGFCK 520
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
++ E I VL M+ GC P + +I G+ G EA ++ ++L
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 198/470 (42%), Gaps = 71/470 (15%)
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
+G + H+ E M K G P V L +++ ++ A+ V + ++ G +
Sbjct: 102 SGNYIESLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
+ L+ G C+ RID+ VL RMR K PD Y +++ L +G LD L+V ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
D +P V+ Y +I G V+E
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEA-------------------------------- 247
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
L+ +++S G + D+ YN +I G+C ++A ++ + +G EPD +S L
Sbjct: 248 ---LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
L + E KL+ +M F EK P
Sbjct: 305 LRALLNQGKWEEGEKLMTKM-----------------FSEKCDP---------------- 331
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+V Y+IL+ +L + G++++A++L + L PD++SY I G + A E
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
+I C+P I Y + LCK G+ D+A+ + LG V P Y+
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK-LGEVGCSPNSSSYNTMFSALWS 450
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
S D + + ++ EMM G P + +++IS +C+ G ++EA ++ ++R
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR 500
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 145/331 (43%), Gaps = 4/331 (1%)
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
G E L + M KG+ D + L++ F + + +++ L G + D+ Y
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
N LI G C +N+ + A ++ + PD ++ ++ +++ K+L Q+
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 472 LGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKK 529
P + + + G AL++ + +G + YN ++ + K G + +
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
A + + +PD SY+I + ++ G+ ++ + K+ C P++ Y L
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
LC+ G+I+EAM L++ + P + Y + C+ + I L M+ GC
Sbjct: 342 TLCRDGKIEEAMNLLK-LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
P V + V++ +CK G ++A ++F L E
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 139/311 (44%), Gaps = 21/311 (6%)
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
N E H L + +++G PD + L+ + + + ++++ +EK G P +
Sbjct: 104 NYIESLH-LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYN 162
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGA 540
+ F + A V ++ K + + YNI++ SL G++ AL + +++
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
N +P +Y+I I + G + +A + ++++ P + Y + +G+CK G +D A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 601 MMLVRD-----CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVC 655
+VR+ C +V S Y++ + E+ ++ +M + C P V
Sbjct: 283 FEMVRNLELKGCEPDVIS------YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 656 SAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFF 715
S +I+ +C+ G IEEA + ++E+ L D YD + ++ D+ + L+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGL--TPDAYSYDPLIAAFCREGRLDVAIEFLE-- 392
Query: 716 GLESKLKSKGC 726
+ S GC
Sbjct: 393 ----TMISDGC 399
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N +Y+ + R+ A L +LM +G P ++ LI GR
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
E M + G P + YN ++ L + G D AL ++ E G ++ + L
Sbjct: 392 ETMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
+G L ++ M PD Y ++ L +G +D + +M+ P V+
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y ++ G R+E+ + + M G + Y L+E G GF
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE--------GIGF------- 555
Query: 401 SSGYRAD-LGIYNNLIE-GLCNLNKFEKAHKLF 431
+GYRA+ + + N+L+ + F++ H+ F
Sbjct: 556 -AGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/551 (23%), Positives = 248/551 (45%), Gaps = 17/551 (3%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
FH ++G+ S N ++ + A+ L ++D G P+ F LI
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDC-GPAPNVVTFCTLINGFC 297
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
G R + +++ M + G++P + Y+ ++D + G L + ++ G+ +
Sbjct: 298 KRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V F + ++G + V RM + P+V YT+L++ L G + ++ +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
+ K +EP ++ Y+++I G G + G+ L+++M G+ D IYG LV+
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ ++ R ++ ++N+LI+G C LN+F++A K+F++ G++PD +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
++ + R+E L +M K+G P F + P + L++F L ++
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD-LMQRN 595
Query: 508 YVSVDIY--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
+S DI N+++ L K ++ A F+ + ++PD +Y+ I + L + +A
Sbjct: 596 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655
Query: 566 CECHNKIIEMSCI----PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
+I E+ + P+ L LCK ++D A+ + + S P Y
Sbjct: 656 ----ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYG 710
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
+ KS D E + EM ++G P V S +I G+CK G ++EA +F +
Sbjct: 711 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 770
Query: 682 KLLTESDTIVY 692
KLL D + Y
Sbjct: 771 KLL--PDVVAY 779
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 194/425 (45%), Gaps = 3/425 (0%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M QG P+ + ILI+ GR + +Y ++ + G++P + Y+ ++D + G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCG 440
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
+L ++Y+D + G + V + VLV GL + G + + +M + R +V +
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L+ D L+V+ M ++PDV + T++ GR+EE LF M
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G D Y +L+++F K G L + + AD+ + N +I L ++ E A
Sbjct: 561 GLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSI 486
K F I+ +EPD ++ ++ Y +R++ ++ + ++ F P L +
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 487 FVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPD 545
+ A+ +FS + EKG + Y LMD K +++ + LF+E+ + P
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 546 SFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
SYSI I G + +A ++ I+ +P + AY L +G CK+G + EA +L
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 606 DCLGN 610
L N
Sbjct: 801 HMLRN 805
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/612 (21%), Positives = 262/612 (42%), Gaps = 67/612 (10%)
Query: 122 SKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAA 181
S L+R +LV +L +++ P + K+F WAE S+ A+ + RN A
Sbjct: 65 SNLQRNETNLV--LLSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVA 118
Query: 182 DQL-PELMDSQGKPPS----------------------------EKQFEILIRMHSDAGR 212
D++ E++ ++GK + +K EI + + G
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFV-YSTQLGV 177
Query: 213 GLRVYHVYEKMRN------------------KFGVKPR-VFLYNRIMDALIRTGHLDLAL 253
+ VY + + + G++P V + ++DAL G + AL
Sbjct: 178 VIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKAL 237
Query: 254 SVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRIL 313
+ E G V+ ++KGL +I+ +L + + P+V + L+
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 314 VPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDR 373
+G +D +++ M++ +EPD++AY+T+I G G + G+ LF + KG +D
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 374 AIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
++ S ++ +V + + K ++ G ++ Y LI+GLC + +A ++
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE---K 490
++ G+EP ++ L+ + + + + + L + M K+G+P D+ + + V+ K
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVV-IYGVLVDGLSK 473
Query: 491 KGPIMALEVFSY--LKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
+G ++ FS L + ++V ++N L+D ++ +AL +F + +KPD +
Sbjct: 474 QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVAT 533
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL 608
++ + + G +++A ++ +M P AY L CK + + L
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 609 GNVTSGPMEFMYSLTVIHAC-KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGT 667
N S + VIH K + E N +++ P V + +I G C
Sbjct: 594 RNKISA--DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 668 IEEARKVFSNLR 679
++EA ++F L+
Sbjct: 652 LDEAERIFELLK 663
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 1/325 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N +N+ R N A ++ LM G P F ++R+ GR ++
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+M K G++P Y ++DA + + L ++D + + + + V++ L +
Sbjct: 555 FRMF-KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
RI++ + + E PD+ Y ++ LD R++E +K P+ +
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+I L ++ +F M KG + YG L++ F + F L +++
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G + Y+ +I+GLC + ++A +F I L PD ++ L+ Y + R+
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFS 485
L + M + G D L R S
Sbjct: 794 EAALLYEHMLRNGVKPDDLLQRALS 818
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 102/239 (42%), Gaps = 8/239 (3%)
Query: 142 PTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFE 201
PT+ + F ++ K + A N + + + + A + + P +
Sbjct: 582 PTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 202 ILIRMHSDAGRGLRVYHVYEKMR-NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
+I + R ++E ++ FG P ++ L + +D A+ ++
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
E G VT+ L+ ++ I+ ++ M+EK P + +Y++++ L +G +D
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG----HLIDRAI 375
++ + ++ PDV+AYA +I G GR+ E +L++ M G L+ RA+
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/644 (22%), Positives = 261/644 (40%), Gaps = 76/644 (11%)
Query: 113 WGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
WGP LS L + P V VL+ + + ++F W E++ H SYN+
Sbjct: 48 WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
M R + A DQ+ M G PS ++ A + Y V + MR KF +P
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR-KFKFRP 166
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
Y ++ A H D+ L+++ +E G + F L++G + GR+D L +L
Sbjct: 167 AFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLL 226
Query: 292 GRMRE----------KLC-------------------------RPDVFAYTVLVRILVPQ 316
M+ +C +PD YT ++ +L
Sbjct: 227 DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKA 286
Query: 317 GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIY 376
LD + ++E ++K+R P AY T+I G + G+ +E Y L + ++KG + Y
Sbjct: 287 NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAY 346
Query: 377 GSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
++ + KV + +++ +L YN LI+ LC K + A +L +
Sbjct: 347 NCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
Query: 437 EGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME-KLGFP----------------VIDD 479
GL P+ +V ++ ++++++ + ++M+ K+ P +DD
Sbjct: 406 AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD 465
Query: 480 LARFFSIFVEKKGPIMALEVFSYL--------KEKGYV------------SVDIYNILMD 519
+ + ++ ++ S + KE G+ + + N MD
Sbjct: 466 AYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ K GE +K ++F+EI PD+ SYSI I + G + E + E C+
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
AY + G CK G++++A L+ + + P Y + K + ++ +
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEE-MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
E + V+ S++I G K G I+EA + L ++ L
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/550 (22%), Positives = 236/550 (42%), Gaps = 39/550 (7%)
Query: 153 EKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR 212
++ KG + +YN C+ + A ++ E M + P+ + ILI M AG+
Sbjct: 334 QRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGK 392
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
+ + + M+ K G+ P V N ++D L ++ LD A +++++ + +TF
Sbjct: 393 LDTAFELRDSMQ-KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
L+ GL + GR+D+ +V +M + CR + YT L++ G + +++++M
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
PD+ T + + G E+G +F+E+K++ + D Y L+ +
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
++L + G D YN +I+G C K KA++L + +G EP ++ ++
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID- 630
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD 512
G ID L + +F E K + L V
Sbjct: 631 --------------------GLAKIDRLDEAYMLFEEAKSKRIELNVV------------ 658
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
IY+ L+D KVG + +A + +E+ L P+ ++++ + V EI +A C +
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
E+ C P+ Y L GLCK+ + ++A + ++ + P Y+ + K+ +
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE-MQKQGMKPSTISYTTMISGLAKAGN 777
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+ + + G P + +A+I G+ +A +F R R L + T V
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCV- 836
Query: 693 DEFLIDHMKK 702
L+D + K
Sbjct: 837 --VLLDTLHK 844
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 223/503 (44%), Gaps = 20/503 (3%)
Query: 193 KPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
KP E +L R+ D R + + YE+ R + P YN ++ + R + D
Sbjct: 62 KPQPEFVIGVLRRLK-DVNRAIEYFRWYER-RTELPHCPES--YNSLLLVMARCRNFDAL 117
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRI 312
+ + G T + +V G +A ++ E +V+ MR+ RP AYT L+
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 313 LVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID 372
+ D L ++++M++ EP V + T+I G + GRV+ L EMKS D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 373 RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
+Y ++SF V KV + ++ ++G + D Y ++I LC N+ ++A ++F+
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ-QMEKLGFPVIDDLARFFSIFVEKK 491
+ P + +++ Y A + + Y LL+ Q K P + + +
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 492 GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
AL+VF +K+ ++ YNIL+D L + G++ A L D + A L P+ + +I
Sbjct: 358 KVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 552 AI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM-----MLV 604
+ LC ++ +AC ++ C P + L GL K+G +D+A ML
Sbjct: 418 MVDRLCKSQ--KLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 605 RDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
DC N +Y+ + + E + +M+ Q C P + + + M K
Sbjct: 476 SDCRTN------SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 665 YGTIEEARKVFSNLRERKLLTES 687
G E+ R +F ++ R+ + ++
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDA 552
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 12/469 (2%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
VY +M + G +P + Y+ +M L + +D + + + + GL TF + ++
Sbjct: 209 EVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
L +AG+I+E E+L RM ++ C PDV YTVL+ L LD V+E+MK R +PD
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+ Y T++ S+ ++ + EM+ GH+ D + LV++ G FD L
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ G +L YN LI GL +++ + A +LF G++P + + Y ++
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 458 RMENFYKLLQQMEKLGFP--VIDDLARFFSIFVEKKG-PIMALEVFSYLKEKGYVSVDI- 513
+ + ++M+ G ++ A +S+ K G A ++F LK+ G V +
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSL--AKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
YN++M KVGE+ +A+ L E+ +PD + I + +A + ++
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG--PMEFMYSLTVIHACKSN 631
EM P++ Y L GL K G+I EA+ L G V G P ++ CK++
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE---GMVQKGCPPNTITFNTLFDCLCKND 622
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ + +L +MM GC P + +I G+ K G ++EA F +++
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 211/461 (45%), Gaps = 6/461 (1%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
+ KMR +FG + YN ++ L+++ A+ VY +G T+ L+ G
Sbjct: 174 YALRKMR-EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
L + ID ++ +L M +P+V+ +T+ +R+L G ++ + + M + PD
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ Y +I L +++ +F++MK+ H DR Y +L++ F + +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
++ G+ D+ + L++ LC F +A V +G+ P+ + L+
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 458 RMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYN 515
R+++ +L ME LG P F + + + ALE F +K KG ++ N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
+ SL K G ++A +F + L PDS +Y++ + C+ +GEI +A + ++++E
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAM-MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
C P + L L K +DEA M +R + + P Y+ + K+ +
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMR--MKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+ I + M+Q+GCPP + + + +CK + A K+
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 240/565 (42%), Gaps = 42/565 (7%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ +G N +YN + R + A +L M+S G P+ + + I + +G
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +EKM+ K G+ P + N + +L + G A ++ K+ GL + VT+ +
Sbjct: 450 VSALETFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++K + G IDE +++L M E C PDV L+ L +D +++ MK+ +
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++P V+ Y T++ GL G+++E LF+ M KG + + +L + ++V
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+L ++ G D+ YN +I GL + ++A F +++ + PDF+++ LL
Sbjct: 629 KMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGV 687
Query: 454 AEAKRMENFYKLLQQM------------------EKLGFPVIDDLARFFSIFVE----KK 491
+A +E+ YK++ L ID+ F V +
Sbjct: 688 VKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRD 747
Query: 492 GPIMALEVFSYLKEKGYVS------------------VDIYNILMDSLHKVGEMKKALSL 533
G + + + Y + VS + YN+L+ L + ++ A +
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
F ++ PD +Y+ + + G+I + E + ++ C + + + GL K
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
G +D+A+ L D + + P Y + KS + + M+ GC P
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 654 VCSAVISGMCKYGTIEEARKVFSNL 678
+ + +I+G K G + A +F +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRM 952
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 137/636 (21%), Positives = 245/636 (38%), Gaps = 113/636 (17%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K KG N + NA Y + + R A Q+ + G P + ++++ +S G
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +M G +P V + N +++ L + +D A ++ KE L VT+
Sbjct: 520 DEAIKLLSEMMEN-GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ GL + G+I E +E+ M +K C P+ + L L + L++ +M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS-----------------KGHLIDRA-- 374
PDV Y TII GL G+V+E F +MK K LI+ A
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 375 ----------------IYGSLVESFVAVNKVGAGFDLLKDLVSSG--------------- 403
+ L+ S +A + + LV++G
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 404 ----------------YRADLGI------YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ DLG+ YN LI GL + E A +F G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQME-------------------KLGFPVIDDLAR 482
D + LL Y ++ +++ ++L ++M K G V D L
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG-NVDDALDL 877
Query: 483 FFSIFVEKK--------GPIM-----------ALEVFSYLKEKG-YVSVDIYNILMDSLH 522
++ + ++ GP++ A ++F + + G + IYNIL++
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K GE A +LF + ++PD +YS+ + C +G + + ++ E P +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
Y + GL K ++EA++L + + P + Y+ +++ + E+ + NE
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
+ + G P +A+I G G E A V+ +
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 217/465 (46%), Gaps = 11/465 (2%)
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N +++AL G L+ V+D ++ + + T++ + K L G + + L +MRE
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
+ ++Y L+ +L+ + V+ M + P + Y++++ GL ++
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
L KEM++ G + + + K+ +++LK + G D+ Y LI+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
LC K + A ++F+ +PD ++ LL +++ + +++ + +MEK G
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH-- 359
Query: 477 IDDLARFFSIFVE---KKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKAL 531
+ D+ F+I V+ K G A + ++++G + ++ YN L+ L +V + AL
Sbjct: 360 VPDVVT-FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
LF + +KP +++Y + I + G+ A E K+ P+I A L
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 592 CKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPG 651
K G EA + L ++ P Y++ + K + ++ I +L+EMM+ GC P
Sbjct: 479 AKAGRDREAKQIFYG-LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 652 NVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
+V +++I+ + K ++EA K+F ++E KL + + Y+ L
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKL--KPTVVTYNTLL 580
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 168/372 (45%), Gaps = 37/372 (9%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
++EK GV+P++ YN ++ L+ +++A V+ K G + T+ L+
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR-VEPD 337
++G+IDE+ E+ M C + + +++ LV GN+D L ++ ++ DR P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
Y +I GLS GR+ E LF+ M G + AIY L+ F + A L K
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+V G R DL Y+ L++ LC + + ++ F+ + GL PD + ++ ++
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY--N 515
R+E AL +F+ +K ++ D+Y N
Sbjct: 1011 RLEE----------------------------------ALVLFNEMKTSRGITPDLYTYN 1036
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
L+ +L G +++A +++EI A L+P+ F+++ I + G+ + A + ++
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 576 SCIPSIAAYKCL 587
P+ Y+ L
Sbjct: 1097 GFSPNTGTYEQL 1108
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 150/338 (44%), Gaps = 3/338 (0%)
Query: 139 QTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEK 198
N + + F K G +YN + + A + + S G P
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 199 QFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDD 258
+ L+ + +G+ ++ +Y++M + + +N ++ L++ G++D AL +Y D
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 259 FKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG 317
D T+ L+ GL ++GR+ E ++ M + CRP+ Y +L+ G
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
D +++ M K+ V PD+ Y+ ++ L GRV+EG FKE+K G D Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 378 SLVESFVAVNKVGAGFDLLKDL-VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
++ +++ L ++ S G DL YN+LI L E+A K++ +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 437 EGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
GLEP+ + L+ Y+ + + E+ Y + Q M GF
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGF 1098
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 7/293 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL---MDSQGKPPSEKQFEILIRMHSDA 210
K G + A+YN + ++ D+L EL M + + I+I A
Sbjct: 812 KSTGCIPDVATYN---FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
G +Y + + P Y ++D L ++G L A +++ + G
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ +L+ G +AG D + RM ++ RPD+ Y+VLV L G +D L ++E+K
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK-SKGHLIDRAIYGSLVESFVAVNKV 389
+ + PDV+ Y II GL R+EE VLF EMK S+G D Y SL+ + V
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ ++ +G ++ +N LI G K E A+ ++Q + G P+
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 2/240 (0%)
Query: 176 NHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFL 235
N A D +LM + P+ + LI S +GR ++E M + +G +P +
Sbjct: 870 NVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD-YGCRPNCAI 928
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN +++ + G D A +++ ++G+ + T+ VLV LC GR+DE L ++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR-VEPDVMAYATIITGLSNGGRV 354
E PDV Y +++ L L+ L ++ EMK R + PD+ Y ++I L G V
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
EE ++ E++ G + + +L+ + K + + + +V+ G+ + G Y L
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 7/285 (2%)
Query: 101 FILDAFRKNG-----YKWGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQ 155
F+LDA+ K+G ++ + T + +T ++V L N + ++
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
+ + +Y ++++ A QL E M G P+ + ILI AG
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
++++M K GV+P + Y+ ++D L G +D L + + KE GL+ + V + +++
Sbjct: 945 ACALFKRMV-KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 276 KGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
GL ++ R++E L + M+ + PD++ Y L+ L G ++ +++ E+++ +
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSL 379
EP+V + +I G S G+ E Y +++ M + G + Y L
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 163/679 (24%), Positives = 292/679 (43%), Gaps = 85/679 (12%)
Query: 113 WGPPVVTELSKLRRVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
W + +EL RR+ V E+L +P L +FF++ +G+ H+ AS+ +
Sbjct: 55 WEIALSSELVS-RRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHA 113
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSE-----------------KQFEILIRMHSDAGRGL 214
+ + N A L + + + PS+ F++LI+ + + R L
Sbjct: 114 LVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVL 173
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
V++ M K + P V + ++ L++ H LA+ +++D G+ + + +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE--MKKD 332
++ LC+ + E++ M C ++ Y VL+ L + +VWE +KKD
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ------KVWEAVGIKKD 287
Query: 333 ----RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
++PDV+ Y T++ GL E G + EM A SLVE K
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ +L+K +V G +L +YN LI+ LC KF +A LF + GL P+ ++
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLG-----------------FPVIDDLARFFSIFVEK- 490
L+ ++ +++ L +M G F I F + + K
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 491 -----------------KGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKAL 531
KG I AL ++ + KG S+ + L+ L + G ++ A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
LF+E+ N+KP+ +Y++ I + + G++ +A E ++ E +P +Y+ L GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 592 CKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPG 651
C G+ EA + V D L E Y+ + C+ E+ + V EM+Q+G
Sbjct: 588 CLTGQASEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 652 NVVCSAVISGMCKYGTIEEARKVFSNL----RERKLLTESDTIVYDEFLIDHMKKKTADL 707
V +I G K+ + RK+F L +R L + D ++Y +ID K KT D
Sbjct: 647 LVCYGVLIDGSLKH----KDRKLFFGLLKEMHDRGL--KPDDVIYTS-MID-AKSKTGDF 698
Query: 708 VMSGLKFFGLESKLKSKGC 726
+ FG+ + ++GC
Sbjct: 699 KEA----FGIWDLMINEGC 713
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 238/540 (44%), Gaps = 14/540 (2%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N YNA + + A+ L + M G P++ + ILI M G+
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+M + G+K V+ YN +++ + G + A + L+ VT+ L+
Sbjct: 422 LSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
G C G+I++ L + M K P ++ +T L+ L G + ++++ EM + V+P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+ + Y +I G G + + + KEM KG + D Y L+ + +
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
L + Y L+ G C K E+A + Q +Q G++ D + L+ +
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM-ALEVFSYLKEKGYVSVDI-Y 514
K + F+ LL++M G D + K G A ++ + +G V ++ Y
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL---GEI--KQACECH 569
+++ L K G + +A L ++ + P+ +Y C +D+ GE+ ++A E H
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYG----CFLDILTKGEVDMQKAVELH 776
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
N I++ + + A Y L +G C+ G I+EA L+ +G+ S P Y+ + C+
Sbjct: 777 NAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS-PDCITYTTMINELCR 834
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
ND +K I + N M ++G P V + +I G C G + +A ++ + + + L+ + T
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 209/435 (48%), Gaps = 4/435 (0%)
Query: 192 GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
G P F L+ GR + ++M + +P + + +++ L G +
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV-EMKQRPDLVTVSTLINGLCLKGRVSE 193
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
AL + D E G + VT+ ++ LC++G L++ +M E+ + V Y++++
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
L G+ D L ++ EM+ ++ DV+ Y+++I GL N G+ ++G + +EM + +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
D + +L++ FV K+ +L ++++ G D YN+LI+G C N +A+++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEK 490
+ + +G EPD ++ L+ Y +AKR+++ +L +++ G P F +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 491 KGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
A E+F + +G SV Y IL+D L GE+ KAL +F+++ + + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
+I I + ++ A + + P + Y + GLCK G + EA ML R +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK-MK 552
Query: 610 NVTSGPMEFMYSLTV 624
P +F Y++ +
Sbjct: 553 EDGCTPDDFTYNILI 567
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 206/458 (44%), Gaps = 9/458 (1%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G++ ++ +++ R L A SV + G + + +TF LV G C GR+ E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ ++ RM E RPD+ + L+ L +G + L + + M + +PD + Y ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G LF++M+ + Y +++S L ++ G +AD
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ Y++LI GLCN K++ K+ + I + PD ++ L+ ++ + ++ +L
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 468 QMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVG 525
+M G P F ++ A ++F + KG + Y+IL++S K
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+ + LF EI+ L P++ +Y+ +L G++ A E +++ PS+ Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNE 642
L GLC GE+++A+ + + M +Y++ + C ++ + +
Sbjct: 460 ILLDGLCDNGELNKALEIFE----KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ +G P V + +I G+CK G++ EA +F ++E
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 222/505 (43%), Gaps = 25/505 (4%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P +NR+ A+ RT DL L + +G++ + T +++ C+ ++ V
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LGR + PD ++ LV +G + + + + M + + PD++ +T+I GL
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
GRV E VL M G D YG ++ DL + + +A +
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
Y+ +I+ LC F+ A LF +G++ D ++ L+ + ++ K+L++M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM- 306
Query: 471 KLGFPVIDDLARF---FSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGE 526
+G +I D+ F +FV++ + A E+++ + +G I YN L+D K
Sbjct: 307 -IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
+ +A +FD + +PD +YSI I + + +I IP+ Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 587 LTKGLCKIGEIDEAMMLVRDCLGNVTSG--PMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
L G C+ G+++ A L ++ V+ G P Y + + C + + K + + +M
Sbjct: 426 LVLGFCQSGKLNAAKELFQEM---VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKT 704
+ G + + +I GMC +++A +F +L ++ + + D + Y+ + KK +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KPDVVTYNVMIGGLCKKGS 540
Query: 705 ---ADLVMSGLKFFGLESKLKSKGC 726
AD+ L K+K GC
Sbjct: 541 LSEADM---------LFRKMKEDGC 556
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 1/321 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ KG + +Y++ + + ++ M + P F LI + G+
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
L +Y +M + G+ P YN ++D + L A ++D G + + VT+ +
Sbjct: 332 LEAKELYNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ C+A R+D+ + + + K P+ Y LV G L+ +++EM
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
V P V+ Y ++ GL + G + + +F++M+ + IY ++ +KV +
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
L L G + D+ YN +I GLC +A LF+ ++G PD + L+ +
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Query: 454 AEAKRMENFYKLLQQMEKLGF 474
+ + +L+++M+ GF
Sbjct: 571 LGGSGLISSVELIEEMKVCGF 591
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 139/294 (47%), Gaps = 2/294 (0%)
Query: 127 VTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPE 186
VT S + +V V+ L K + +G + +YN+ + N A+Q+ +
Sbjct: 316 VTFSALIDVF-VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 187 LMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
LM S+G P + ILI + A R ++ ++ +K G+ P YN ++ ++
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQS 433
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G L+ A ++ + G+ VT+ +L+ GLC G +++ LE+ +M++ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
+++ + +D ++ + V+PDV+ Y +I GL G + E +LF++MK
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
G D Y L+ + + + + + +L++++ G+ AD +I+ L +
Sbjct: 554 DGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 167/386 (43%), Gaps = 23/386 (5%)
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
+ ++E M + R P + + + + ++ + + K M+ G D ++
Sbjct: 55 IDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 114
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ K+ F +L GY D ++ L+ G C + +A L ++ PD
Sbjct: 115 YCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF--------PVIDDLARFFSIFVEKKGPI 494
++V L+ R+ L+ +M + GF PV++ L +
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK-------SGNSA 227
Query: 495 MALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+AL++F ++E+ SV Y+I++DSL K G ALSLF+E+ +K D +YS I
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 554 LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTS 613
+ G+ + ++I + IP + + L K G++ EA L + +T
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM---ITR 344
Query: 614 G--PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
G P Y+ + CK N + + + M+ +GC P V S +I+ CK +++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 672 RKVFSNLRERKLLTESDTIVYDEFLI 697
++F + + L+ +TI Y+ ++
Sbjct: 405 MRLFREISSKGLI--PNTITYNTLVL 428
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/614 (22%), Positives = 274/614 (44%), Gaps = 44/614 (7%)
Query: 113 WGPPVVTELSKL-RRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
W P ++ L R + PS V VL+ Q + ++ KFF+WA++Q Y H+ Y +
Sbjct: 157 WNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEV 216
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
+++ + + ++ LM +G + + F ++ +S AG+ V M+ + GV+P
Sbjct: 217 LSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQ-RAGVEP 275
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
+ + N +D +R L+ AL + + G+ VT+ +++G C R++E +E+L
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR-VEPDVMAYATIITGLSN 350
M K C PD +Y ++ L + + + ++M K+ + PD + Y T+I L+
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY-RADLG 409
+E K+ + KG ID+ Y ++V + ++ DL+ +++S G+ D+
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA------EAKRMENFY 463
Y ++ G C L + +KA KL QV G +P+ +S LL EA+ M N
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 464 K-------------LLQQMEKLG-FPVIDDLAR------FFSIFVEKKGPIMAL------ 497
+ ++ + + G D+ R FF VE + +L
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 498 -EVFSYLKE---KG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
E +++E KG ++V + ++ + E+ ALS+ D++ N D F+Y+
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
+ G I +A E K++ P+ Y+ + C++G++D+ + ++ ++
Sbjct: 636 VDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM---IS 692
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
+Y+ + C E+ +L ++++ C A++ G K G A
Sbjct: 693 RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 752
Query: 673 KVFSNLRERKLLTE 686
KV + R L+ +
Sbjct: 753 KVACRMFNRNLIPD 766
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 192/474 (40%), Gaps = 43/474 (9%)
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
+Y +++ L +T + V K G+ F ++ +AG++ + L+VL
Sbjct: 208 MVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTL 267
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
M+ P++ + + V L+ LR E M+ + P+V+ Y +I G + R
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS-GYRADLGIYN 412
VEE L ++M SKG L D+ Y +++ ++ DL+K + G D YN
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
LI L + ++A + ++G D L ++ + RM L+ +M
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM--- 444
Query: 473 GFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKA 530
KG+ D+ Y +++ ++GE+ KA
Sbjct: 445 -------------------------------LSKGHCPPDVVTYTAVVNGFCRLGEVDKA 473
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
L ++ KP++ SY+ + G+ +A E N E P+ Y + G
Sbjct: 474 KKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHG 533
Query: 591 LCKIGEIDEAMMLVRD-CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
L + G++ EA +VR+ L GP+E +L + C+ + + E + +GC
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEI--NLLLQSLCRDGRTHEARKFMEECLNKGCA 591
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKK 703
V + VI G C+ ++ A V ++ L+ + + L+D + KK
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDM---YLINKHADVFTYTTLVDTLGKK 642
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/618 (22%), Positives = 263/618 (42%), Gaps = 60/618 (9%)
Query: 113 WGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCM 172
GPP++ P V V+K Q +P + + F+ K+ G+ H ++Y + +
Sbjct: 1 MGPPLL----------PKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKL 50
Query: 173 NRNNHHRAADQ-LPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
A ++ L ++ ++ G E + ++ + G+ +V+E+M + + +P
Sbjct: 51 GYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEP 109
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
VF YN IM L+ +G+ D A VY ++ G+ + +F + +K C+ R L +L
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
M + C +V AY +V + ++ +M V + + ++ L
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
G V+E L ++ +G L + Y ++ ++ ++ L+ G + D+ Y
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
NNLI GLC +KF++A + EGLEPD + L+ Y + ++ +++
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 472 LGF--------PVIDDLA------RFFSIFVEKKGPIMALEVFSY--------------- 502
GF +ID L R ++F E G + V Y
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 503 -------LKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
+ EKG + V +NIL++ L K+G + A L + PD F+++I I
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 555 CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM-----MLVRDCLG 609
+ +++ A E + +++ P + Y L GLCK + ++ M M+ + C
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC-- 527
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
P F +++ + C+ ++ +G+L EM + P V +I G CK G ++
Sbjct: 528 ----APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 670 EARKVFSNLRERKLLTES 687
A +F + E ++ S
Sbjct: 584 GAYTLFRKMEEAYKVSSS 601
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/596 (21%), Positives = 243/596 (40%), Gaps = 14/596 (2%)
Query: 125 RRVTPSLVAEVLKVQT-----NPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHR 179
R +TP + + +++++ P + + + Q G N +Y N
Sbjct: 140 RGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKA 198
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRI 239
+L M + G F L+R+ G + +K+ + GV P +F YN
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLFTYNLF 257
Query: 240 MDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+ L + G LD A+ + E G + +T+ L+ GLC+ + E LG+M +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
PD + Y L+ G + R+ + + PD Y ++I GL + G
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
LF E KG + +Y +L++ + L ++ G ++ +N L+ GLC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVID 478
+ A L +V I +G PD + L+ Y+ +MEN ++L M G P +
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI 537
+ + +E + + EKG ++ +NIL++SL + ++ +AL L +E+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS-IAAYKCLTKGLCKIGE 596
++ PD+ ++ I G++ A K+ E + S Y + +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
+ A L ++ + GP + Y L V CK+ + L EMM+ G P
Sbjct: 618 VTMAEKLFQEMVDRCL-GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 657 AVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSGL 712
VI+ +C + EA + + ++ L+ E+ + D +D + LV+ L
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICD---VDKKEVAAPKLVLEDL 729
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 182/440 (41%), Gaps = 36/440 (8%)
Query: 252 ALSVYDDF-KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV-FAYTVL 309
AL +++ KE G T+ +++ L G+ + M EVL MRE + + Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
++ +G + + V+E M EP V +Y I++ L + G ++ + ++ M+ +G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
D + ++SF ++ A LL ++ S G ++ Y ++ G N + ++
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
LF + G+ + LL + + ++ KLL ++ K G L F+
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV-----LPNLFT---- 253
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
YN+ + L + GE+ A+ + + KPD +Y
Sbjct: 254 ------------------------YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITY 289
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
+ I + ++A K++ P Y L G CK G + A +V D +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
N P +F Y + C + + + + NE + +G P ++ + +I G+ G I
Sbjct: 350 NGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMIL 408
Query: 670 EARKVFSNLRERKLLTESDT 689
EA ++ + + E+ L+ E T
Sbjct: 409 EAAQLANEMSEKGLIPEVQT 428
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/618 (21%), Positives = 255/618 (41%), Gaps = 80/618 (12%)
Query: 131 LVAEVLKVQTNPTLSFKFFHWAEK-QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMD 189
V VL+ Q NP S +F+ W Y + + + + R + +L + +
Sbjct: 78 FVISVLQNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIR 137
Query: 190 SQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
G S++ +LI G V+ ++ + G+KP LYN ++DAL+++ L
Sbjct: 138 DSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQI-SFLGMKPSTRLYNAVIDALVKSNSL 196
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
DLA + + DG +R T+ +L+ G+C+ G +DE + ++ +M ++ RP+VF YT+L
Sbjct: 197 DLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTIL 256
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG---------------------- 347
+ + G +D L+ E M+ ++ P+ T + G
Sbjct: 257 IDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDS 316
Query: 348 -------------LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
LSN +E +++ +G++ D + + + + + + +
Sbjct: 317 NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCR 376
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+ VS G + Y L++ L N +F + + + +GL S ++
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY 514
+A+R+EN L +M+ G P + +
Sbjct: 437 KARRIENAAMFLTEMQDRGI-----------------SPNLV----------------TF 463
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE 574
N + G++KK + +++ KPD ++S+ I C EIK A +C +++E
Sbjct: 464 NTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
P+ Y L + C G+ D ++ L N S P + Y+ T+ CK +
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS-PDLYAYNATIQSFCKMRKVK 582
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDE 694
K +L M++ G P N S +I + + G EAR++FS++ + +S Y +
Sbjct: 583 KAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS----YTK 638
Query: 695 FLIDHMKKKTADLVMSGL 712
L++ + DL SGL
Sbjct: 639 RLVEEL-----DLRKSGL 651
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 206/414 (49%), Gaps = 15/414 (3%)
Query: 200 FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDF 259
I+I + Y V K+ K G +P +N ++ L G + A+ + D
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 260 KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNL 319
E+G + VT+ +V G+C++G L++L +M E+ + DVF Y+ ++ L G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 320 DGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSL 379
D + +++EM+ ++ V+ Y +++ GL G+ +G +L K+M S+ + + + L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 380 VESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
++ FV K+ +L K++++ G ++ YN L++G C N+ +A+ + + ++
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 440 EPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE---KKGPI-M 495
PD ++ L+ Y KR+++ K+ + + K G A +SI V+ + G I +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN---AVTYSILVQGFCQSGKIKL 421
Query: 496 ALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
A E+F + G + V Y IL+D L G+++KAL +F+++ + + Y+ I
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 555 CHVDLGEIKQACECHNKIIEMSC---IPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
G+++ A N + C P++ Y + GLCK G + EA +L+R
Sbjct: 482 GMCKGGKVEDA---WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 230/509 (45%), Gaps = 29/509 (5%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ ++ N +++ R A SV + G + + TF L+KGL G++ E
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ ++ RM E C+PDV Y +V + G+ L + +M++ V+ DV Y+TII
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G ++ LFKEM++KG Y SLV K G LLKD+VS +
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ +N L++ K ++A++L++ I G+ P+ ++ L+ Y R+ +L
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 468 QMEKLGFPVIDDLARFFSIFVEKKGPIM------ALEVFSYLKEKGYVSVDI-YNILMDS 520
M + D+ F S+ KG M ++VF + ++G V+ + Y+IL+
Sbjct: 358 LMVR--NKCSPDIVTFTSLI---KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
+ G++K A LF E+ + PD +Y I + D G++++A E + +
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRD--CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG 638
I Y + +G+CK G++++A L C G P Y++ + CK +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG---VKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 639 VLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLID 698
+L +M + G P + + +I + G + + K+ ++ ++ +I
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI-------- 581
Query: 699 HMKKKTADLVMSGLKFFGLESKLKSKGCK 727
K D+++S +K L L SKG K
Sbjct: 582 ---KMVIDMLLSAMKRLTLRYCL-SKGSK 606
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 199/455 (43%), Gaps = 9/455 (1%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + ++R A+ RT +L L + +G+ T +++ C+ + V
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LG++ + PD + L++ L +G + + + + M ++ +PDV+ Y +I+ G+
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G L ++M+ + D Y ++++S + A L K++ + G ++ +
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN+L+ GLC K+ L + + + P+ ++ LL ++ + +++ +L ++M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 471 KLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDIYNILMDSLHKVGEMK 528
G P I + + A + + + K + + L+ V +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
+ +F I+ L ++ +YSI + G+IK A E +++ +P + Y L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 589 KGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNEMMQ 645
GLC G++++A+ + D + M+ MY+ + CK E + +
Sbjct: 446 DGLCDNGKLEKALEIFED----LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+G P + + +ISG+CK G++ EA + + E
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 156 KGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR- 212
+G N +YN YCM N A+ + +LM P F LI+ + R
Sbjct: 327 RGISPNIITYNTLMDGYCMQ--NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 213 --GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
G++V+ K G+ Y+ ++ ++G + LA ++ + G+ + +T
Sbjct: 385 DDGMKVFRNISKR----GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ +L+ GLC G++++ LE+ +++ + YT ++ + G ++ ++ +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
V+P+VM Y +I+GL G + E +L ++M+ G+ + Y +L+ + + +
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 391 AGFDLLKDLVSSGYRAD 407
A L++++ S G+ AD
Sbjct: 561 ASAKLIEEMKSCGFSAD 577
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 215/453 (47%), Gaps = 7/453 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G H+ +Y+ F C R + A + M G P L+ + + R
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ ++M + G KP F + ++ L A+++ D + G + VT+ +V
Sbjct: 173 VALVDQMV-EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GLC+ G ID L +L +M + DV Y ++ L ++D L ++ EM + P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
DV Y+++I+ L N GR + L +M + + + +L+++FV K+ L
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+++ D+ Y++LI G C ++ ++A +F++ I + P+ ++ L+ + +A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKG-YVSVD 512
KR+E +L ++M + G ++ + + ++ F + + A VF + G + ++
Sbjct: 412 KRVEEGMELFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
YNIL+D L K G++ KA+ +F+ + + ++PD ++Y+I I G+++ E +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
P++ AY + G C+ G +EA L++
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 226/497 (45%), Gaps = 4/497 (0%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS +F L+ + + V + E+M+ G+ ++ Y+ ++ R L LAL+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQT-LGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
V + G + + VT L+ G C + RI + + ++ +M E +PD F +T L+ L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+ + ++M + +PD++ Y T++ GL G ++ L K+M+ D
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
IY ++++ + +L ++ + G R D+ Y++LI LCN ++ A +L
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGP 493
I+ + P+ ++ L+ + + ++ KL +M K P I + + F
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 494 IMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
A +F + K + +V Y+ L+ K +++ + LF E++ L ++ +Y+
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I + A +++ + P+I Y L GLCK G++ +AM +V + L T
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRST 498
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P + Y++ + CK+ E + + +G P + + +ISG C+ G+ EEA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 673 KVFSNLRERKLLTESDT 689
+ ++E L S T
Sbjct: 559 SLLKKMKEDGPLPNSGT 575
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 212/495 (42%), Gaps = 59/495 (11%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +N+++ A+ + +L +S+ + + G+ + T+ + + C+ ++ L V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
L +M + PD+ + L+ + + + ++M + +PD + T+I GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
+ E L +M +G D YG++V + LLK + AD+ I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN +I+GLC + A LF +G+ PD + L+ R
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS---------- 310
Query: 471 KLGFPVIDDLARFFSIFVEKK-GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKK 529
D +R S +E+K P +V ++ L+D+ K G++ +
Sbjct: 311 --------DASRLLSDMIERKINP----------------NVVTFSALIDAFVKEGKLVE 346
Query: 530 ALSLFDEINGANLKPDSFSYSIAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
A L+DE+ ++ PD F+YS I C H L E K E +I C P++ Y
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYST 403
Query: 587 LTKGLCKIGEIDEAMMLVRD-----CLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVL 640
L KG CK ++E M L R+ +GN + Y+ T+IH ++ D + V
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVT------YT-TLIHGFFQARDCDNAQMVF 456
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM 700
+M+ G P + + ++ G+CK G + +A VF L+ + E D Y+ +I+ M
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM--EPDIYTYN-IMIEGM 513
Query: 701 KKKTADLVMSGLKFF 715
K A V G + F
Sbjct: 514 CK--AGKVEDGWELF 526
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 181/429 (42%), Gaps = 38/429 (8%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ GY + ++ + + +N A L + M +G P + ++ G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ +KM K ++ V +YN I+D L + H+D AL+++ + G+ + T+ L
Sbjct: 241 LALSLLKKME-KGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ LC GR + +L M E+ P+V ++ L+ V +G L ++++EM K +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 335 EPD-----------------------------------VMAYATIITGLSNGGRVEEGYV 359
+PD V+ Y+T+I G RVEEG
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
LF+EM +G + + Y +L+ F + K +VS G ++ YN L++GLC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVID 478
K KA +F+ + +EPD + ++ +A ++E+ ++L + G P +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI 537
S F K A + +KE G + + YN L+ + + G+ + + L E+
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 538 NGANLKPDS 546
D+
Sbjct: 600 RSCGFAGDA 608
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 218/507 (42%), Gaps = 39/507 (7%)
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
L E M + G P + + ILI + V KM K G +P + + +++
Sbjct: 102 SLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM-KLGYEPNIVTLSSLLNG 160
Query: 243 LIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+ + A+++ D G VTF L+ GL + E + ++ RM K C+PD
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
+ Y V+V L +G+ D + +M++ ++EP V+ Y TII GL +++ LFK
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EM++KG + Y SL+ + LL D++ D+ ++ LI+
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVIDDLA 481
K +A KL+ ++ ++P ++ L+ + R++ ++ + M K FP +
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGA 540
F + K +EVF + ++G V + YNIL+ L + G+ A +F E
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE---- 456
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
++ P+I Y L GLCK G++++A
Sbjct: 457 -------------------------------MVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 601 MMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVIS 660
M+V + L P + Y++ + CK+ E + + +G P V + +IS
Sbjct: 486 -MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 661 GMCKYGTIEEARKVFSNLRERKLLTES 687
G C+ G+ EEA +F ++E L S
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNS 571
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 207/451 (45%), Gaps = 36/451 (7%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
GY N ++N + + +N A L + M ++G P + +++ G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+++ KM ++P V +YN I+D L + H+D AL+++ + + G+ VT+ L+
Sbjct: 241 FNLLNKMEQG-KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
LC GR + +L M E+ PDVF ++ L+ V +G L ++++EM K ++P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
++ Y+++I G R++E +F+ M SK D Y +L++ F +V G ++
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+++ G + YN LI+GL + A ++F+ + +G+ P+ ++ LL +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDIYN 515
++E A+ VF YL + K ++ YN
Sbjct: 480 GKLEK----------------------------------AMVVFEYLQRSKMEPTIYTYN 505
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
I+++ + K G+++ LF ++ +KPD +Y+ I G ++A ++ E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+P+ Y L + + G+ + + L+++
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKE 596
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 198/461 (42%), Gaps = 50/461 (10%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +++++ A+ + D+ +S+ + + G+ T+ +L+ C+ ++ L V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LG+M + P++ + L+ + + + ++M +P+ + + T+I GL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
+ E L M +KG D YG +V F+LL + + I
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN +I+GLC + A LF+ +G+ P+ ++ L+ R
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS---------- 308
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKA 530
D +R S +E+K + +VF+ ++ L+D+ K G++ +A
Sbjct: 309 --------DASRLLSDMIERK---INPDVFT------------FSALIDAFVKEGKLVEA 345
Query: 531 LSLFDEINGANLKPDSFSYSIAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
L+DE+ ++ P +YS I C H L E KQ E ++ C P + Y L
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF---MVSKHCFPDVVTYNTL 402
Query: 588 TKGLCKIGEIDEAM-----MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
KG CK ++E M M R +GN + Y++ + ++ D + + E
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVT------YNILIQGLFQAGDCDMAQEIFKE 456
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
M+ G PP + + ++ G+CK G +E+A VF L+ K+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M +G + + ILI+ AG ++++M + GV P + YN ++D L + G
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNG 480
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
L+ A+ V++ + ++ T+ ++++G+C+AG++++ ++ + K +PDV AY
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
++ +G+ + +++EMK+D P+ Y T+I G E L KEM+S
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Query: 368 GHLIDRAIYG 377
G D + G
Sbjct: 601 GFAGDASTIG 610
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/593 (23%), Positives = 259/593 (43%), Gaps = 25/593 (4%)
Query: 143 TLSFKFFHWAEKQ-----KGYHHNFASYNAFAYCMNRN-----NHHRAADQLPELMDSQG 192
+L+ +F H + +G + + SY+ + ++RN A D E++ S
Sbjct: 2 SLAKRFVHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKS-- 59
Query: 193 KP-PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
+P PS +F L+ + + V EKM GV ++ YN +++ L R L
Sbjct: 60 RPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME-ILGVSHNLYTYNIMINCLCRRSQLSF 118
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
AL++ + G VT L+ G C RI E + ++ +M E +PD +T LV
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
L + + E M +PD++ Y +I GL G + L +M+
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
D IY ++++S V +L ++ + G R D+ Y++LI LCN ++ A +L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEK 490
++ + P+ ++ L+ +A+ ++ KL +M + P I + F
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 491 KGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
A ++F+ + K + V YN L++ K ++ + LF +++ L ++ +Y
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
+ I + A +++ P+I Y L GLCK G++++A M+V + L
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQ 477
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
P + Y++ CK+ E + + +G P + + +ISG CK G E
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 670 EARKVFSNLRERKLLTESDTIVYDEFLIDHM----KKKTADLV--MSGLKFFG 716
EA +F ++E L +S T Y+ + H+ K +A+L+ M +F G
Sbjct: 538 EAYTLFIKMKEDGPLPDSGT--YNTLIRAHLRDGDKAASAELIKEMRSCRFAG 588
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 155 QKGYHHNFASYNAF--AYCMNRNNHHR--AADQLPELMDSQGKPPSEKQFEILIRMHSDA 210
Q+ N +YN+ +CM H R A Q+ LM S+ P + LI A
Sbjct: 338 QRSIDPNIVTYNSLINGFCM----HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
+ + ++ M + G+ Y ++ + D A V+ DG+ +T
Sbjct: 394 KKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ L+ GLC+ G++++ + V +++ PD++ Y ++ + G ++ ++ +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
V+PDV+AY T+I+G G EE Y LF +MK G L D Y +L+ + +
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 391 AGFDLLKDLVSSGYRADLGIY 411
A +L+K++ S + D Y
Sbjct: 573 ASAELIKEMRSCRFAGDASTY 593
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 91/175 (52%), Gaps = 2/175 (1%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
V+++M + GV P + YN ++D L + G L+ A+ V++ ++ ++ + T+ ++ +G+
Sbjct: 437 VFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+AG++++ ++ + K +PDV AY ++ +G + ++ +MK+D PD
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
Y T+I G L KEM+S D + YG LV + ++ GF
Sbjct: 556 GTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 609
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
++G N +Y + + + A + + M S G P+ + L+ G+
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ V+E ++ K ++P ++ YN + + + + G ++ ++ G+ + + + +
Sbjct: 468 KAMVVFEYLQ-KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C+ G +E + +M+E PD Y L+R + G+ + +EM+ R
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 586
Query: 335 EPDVMAYATIITGLSNGGRVEEGYV 359
D Y ++T + + GR+++G++
Sbjct: 587 AGDASTYG-LVTDMLHDGRLDKGFL 610
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/492 (23%), Positives = 230/492 (46%), Gaps = 18/492 (3%)
Query: 124 LRRVTPSLVAEVLK---VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRA 180
L +++P+ V+ VLK ++ P +++ FF W+ KQK Y HN Y + + +
Sbjct: 111 LIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLAL---AKD 167
Query: 181 ADQLPELMDSQGK----PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLY 236
D++ + S+ K P + LI+ G + V+ KM+ G++P ++ Y
Sbjct: 168 VDRI-RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN-GIEPTLYTY 225
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N +M+ L+ +D A V++ + + + VT+ ++KG C+AG+ + +E L M
Sbjct: 226 NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMET 285
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
+ D Y +++ + C+ +++EM + ++ A++ +I GL G++ E
Sbjct: 286 RGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNE 345
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
GY +F+ M KG + AIY L++ + V LL ++ G++ D+ Y+ ++
Sbjct: 346 GYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
GLC + E+A F +GL + + L+ +A R++ +L ++M + G
Sbjct: 406 GLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-T 464
Query: 477 IDDLA--RFFSIFVEKKGPIMALEVFSYLKEKGYV--SVDIYNILMDSLHKVGEMKKALS 532
D F + + A+ +F ++E+ +V Y IL+ + K ++AL
Sbjct: 465 RDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK 524
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
L+D + + P + + G++ +AC+ +++ M I AA + + LC
Sbjct: 525 LWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLC 583
Query: 593 KIGEIDEAMMLV 604
K G I EA L
Sbjct: 584 KAGRIKEACKLA 595
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 165/359 (45%), Gaps = 11/359 (3%)
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
K+ + ++ Y +++ L+ V+ + E+K + + +L++SF + V
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
+ + + +G L YN L+ GL + + A ++F+V ++PD ++ +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPV--IDDLARFFSIFVEKK-GPIMALEVFSYLKEK 506
+ Y +A + + + L+ ME G I + + + + G +AL + + EK
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL--YQEMDEK 321
Query: 507 GY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
G V +++++ L K G++ + ++F+ + KP+ Y++ I + G ++ A
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDA 381
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLT-- 623
+++I+ P + Y + GLCK G ++EA+ C + + F SL
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDG 441
Query: 624 VIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ A + ++AE+ + EM ++GC + +A+I K+ ++EA +F + E +
Sbjct: 442 LGKAGRVDEAER---LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 163/378 (43%), Gaps = 14/378 (3%)
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y LV +L ++D V E+KK V A +I G VEE ++++MK
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G Y L+ V+ V + + + + S + D+ YN +I+G C + +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLL-VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
KA + + G E D ++ ++ YA++ + L Q+M++ G V F
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSD-FGSCVALYQEMDEKGIQVP---PHAF 330
Query: 485 SIFVE---KKGPIM-ALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEING 539
S+ + K+G + VF + KG +V IY +L+D K G ++ A+ L +
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACE-CHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
KPD +YS+ + G +++A + H + I S+ Y L GL K G +D
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF-YSSLIDGLGKAGRVD 449
Query: 599 EAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ-GCPPGNVVCSA 657
EA L + + + Y+ + K ++ I + M ++ GC +
Sbjct: 450 EAERLFEE-MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 658 VISGMCKYGTIEEARKVF 675
++SGM K EEA K++
Sbjct: 509 LLSGMFKEHRNEEALKLW 526
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 204/460 (44%), Gaps = 40/460 (8%)
Query: 129 PSLV--AEVLKVQTNPTLSFKFFHWAEKQK--GYHHNFASYNAFAYCMNRNNHHRAADQL 184
PS+V +L N ++++K + G H+ S+ +C R + A +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
M G PS F L+ R + + M K G +P V +YN ++D L
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-KSGYEPNVVVYNTLIDGLC 187
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
+ G L++AL + ++ ++ GL + VT+ L+ GLC +GR + +L M ++ PDV
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+T L+ + V QGNLD +++EM + V+P+ + Y +II GL GR+ + F M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
SKG + Y +L+ F V G L + + G+ AD+ YN LI G C + K
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
A +F + + PD ++ LL +E+
Sbjct: 368 RVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES----------------------- 404
Query: 485 SIFVEKKGPIMALEVFSYLKE-KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLK 543
AL F ++E + Y+ + YNI++ L K +++KA LF + +K
Sbjct: 405 -----------ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 544 PDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
PD+ +Y+I IL G ++A E ++ E I + A
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 199/427 (46%), Gaps = 14/427 (3%)
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E++ SQ PS F L+ ++ R V + +KM +G+ ++ + ++ R
Sbjct: 61 EMVHSQ-PLPSIVDFTRLLTATANLRRYETVIYFSQKME-LYGISHDLYSFTILIHCFCR 118
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
L ALSV + G + VTF L+ G C RI + ++ M + P+V
Sbjct: 119 CSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVV 178
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y L+ L G L+ L + EM+K + DV+ Y T++TGL GR + + ++M
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
+ D + +L++ FV + +L K+++ S + YN++I GLC +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFS 485
A K F + +G P+ ++ L+ + + + ++ KL Q+M GF D+ + +
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA--DIFTYNT 356
Query: 486 I---FVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGA 540
+ + + +AL++F ++ + V+ DI + IL+ L GE++ AL FD++ +
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 541 NLKPDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
+Y+I I LC D ++++A E ++ P Y + GLCK G
Sbjct: 416 EKYIGIVAYNIMIHGLCKAD--KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 599 EAMMLVR 605
EA L+R
Sbjct: 474 EADELIR 480
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 183/413 (44%), Gaps = 31/413 (7%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D++++T+L+ L L V +M K EP ++ + +++ G R+ + + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
M G+ + +Y +L++ ++ +LL ++ G AD+ YN L+ GLC
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF------- 474
++ A ++ + ++ + PD ++ L+ ++ + ++ +L ++M +
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 475 -PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALS 532
+I+ L ++ KK F + KG + +V YN L+ K + + +
Sbjct: 285 NSIINGLCMHGRLYDAKK-------TFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
LF ++ D F+Y+ I + +G+++ A + ++ P I + L GLC
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 593 KIGEIDEAMMLVRDC------LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ 646
GEI+ A++ D +G V Y++ + CK++ EK + + +
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVA-------YNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDH 699
G P + +I G+CK G EA ++ ++E ++ + + D+ L +H
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA--EDDHLEEH 501
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
+ D +S++I I C + A K++++ PSI + L G C + I +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 602 MLVRDCLGNVTSG--PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
LV + V SG P +Y+ + CK+ + + +LNEM ++G V + ++
Sbjct: 162 SLV---ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 660 SGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
+G+C G +A ++ ++ +R + D + + + +K+ D
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSI--NPDVVTFTALIDVFVKQGNLD 263
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 243/542 (44%), Gaps = 13/542 (2%)
Query: 156 KGYHHNFASYNAFAYCMNRN-----NHHRAADQLPELMDSQGKP-PSEKQFEILIRMHSD 209
+G + + ASY+ + ++RN A D E++ Q +P PS +F L+ +
Sbjct: 36 RGVYFSAASYD-YREKLSRNVLLDLKLDDAVDLFGEMV--QSRPLPSIVEFNKLLSAIAK 92
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
+ V + E+M+N + ++ YN +++ R L LAL+V + G + + V
Sbjct: 93 MNKFDLVISLGERMQN-LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIV 151
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
T L+ G C RI E + ++ +M +P+ + L+ L + + + M
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+PD+ Y T++ GL G ++ L K+M+ D IY +++++ V
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
+L ++ + G R ++ YN+LI LCN ++ A +L I+ + P+ ++ L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG- 507
+ + + ++ KL +M K P I + + F A +F + K
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ +V YN L+ K +++ + LF E++ L ++ +Y+ I G+ A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
K++ P I Y L GLCK G++++A ++V + L P + Y++ +
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA-LVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTES 687
CK+ E + + +G P ++ + +ISG C+ G EEA +F ++E L S
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 688 DT 689
T
Sbjct: 571 GT 572
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 202/450 (44%), Gaps = 36/450 (8%)
Query: 158 YHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY 217
Y N ++N + + +N A L + M ++G P + ++ G
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
+ +KM K ++ V +Y I+DAL +++ AL+++ + G+ VT+ L++
Sbjct: 241 SLLKKME-KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC GR + +L M E+ P+V ++ L+ V +G L ++++EM K ++PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+ Y+++I G R++E +F+ M SK + Y +L++ F +V G +L +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
++ G + YN LI+GL + A K+F+ + +G+ PD ++ LL
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL------- 472
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDIYNI 516
D L ++ + EK AL VF YL K K + YNI
Sbjct: 473 --------------------DGLCKYGKL--EK-----ALVVFEYLQKSKMEPDIYTYNI 505
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
+++ + K G+++ LF ++ +KP+ Y+ I G ++A ++ E
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+P+ Y L + + G+ + L+++
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKE 595
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 201/460 (43%), Gaps = 54/460 (11%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V F L+ + + + D ++ + RM+ D+++Y +L+ + L L V +
Sbjct: 81 VEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGK 140
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M K EPD++ ++++ G +G R+ E L +M + + + +L+ NK
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
L+ +V+ G + DL Y ++ GLC + A L + + +E D +
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGF-PVI----------------DDLARFFSIFVEKK 491
++ K + + L +M+ G P + D +R S +E+K
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 492 -GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
P +V ++ L+D+ K G++ +A L+DE+ ++ PD F+YS
Sbjct: 321 INP----------------NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 551 IAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD- 606
I C H L E K E +I C P++ Y L KG CK ++E M L R+
Sbjct: 365 SLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 607 ----CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
+GN + Y+ + ++ D + + +M+ G PP + S ++ G+
Sbjct: 422 SQRGLVGNTVT------YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 663 CKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
CKYG +E+A VF L++ K+ E D Y+ +I+ M K
Sbjct: 476 CKYGKLEKALVVFEYLQKSKM--EPDIYTYN-IMIEGMCK 512
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 145/320 (45%), Gaps = 1/320 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
KG N +YN+ C+ A +L M + P+ F LI G+ +
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+Y++M + + P +F Y+ +++ LD A +++ VT+ L
Sbjct: 343 EAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+KG C+A R++E +E+ M ++ + Y L++ L G+ D +++++M D V
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
PD++ Y+ ++ GL G++E+ V+F+ ++ D Y ++E KV G+D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L L G + ++ IY +I G C E+A LF+ ++G P+ + L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 455 EAKRMENFYKLLQQMEKLGF 474
+L+++M GF
Sbjct: 582 RDGDKAASAELIKEMRSCGF 601
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 169 AYCMNRNNHHR--AADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNK 226
+CM H R A + ELM S+ P+ + LI+ A R ++ +M +
Sbjct: 369 GFCM----HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424
Query: 227 FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDE 286
G+ YN ++ L + G D+A ++ DG+ + +T+ +L+ GLC+ G++++
Sbjct: 425 -GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEK 483
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
L V +++ PD++ Y +++ + G ++ ++ + V+P+V+ Y T+I+
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 347 GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA 406
G G EE LF+EMK G L + Y +L+ + + A +L+K++ S G+
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 407 DLGIYNNLIEGLCNLNKFEKAH 428
D + +I L + + EK++
Sbjct: 604 DASTISMVINMLHD-GRLEKSY 624
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
Q+G N +YN + + A ++ + M S G PP
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD------------------ 464
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ Y+ ++D L + G L+ AL V++ ++ ++ + T+ ++
Sbjct: 465 ------------------IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
++G+C+AG++++ ++ + K +P+V YT ++ +G + ++ EMK+D
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
P+ Y T+I G L KEM+S G + D +
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 606
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 234/532 (43%), Gaps = 12/532 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K G + +YN C R + H+ A Q+ E M + G + + L+ ++ + R
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
V +M G P + YN ++ A R G LD A+ + + E G + T+
Sbjct: 331 KEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G +AG+++ + + MR C+P++ + +++ +G +++++E+
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ PD++ + T++ G E +FKEMK G + +R + +L+ ++
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+ + ++ +G DL YN ++ L +E++ K+ +P+ L+ LL Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 454 AEAKRMENFYKLLQQMEKLGFPVIDDLARFFS--IFVEKKGPIM--ALEVFSYLKEKGYV 509
A K + + L +++ VI+ A + V K ++ A FS LKE+G+
Sbjct: 570 ANGKEIGLMHSLAEEVYS---GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF- 625
Query: 510 SVDIYNI-LMDSLHKVGEM-KKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
S DI + M S++ +M KA + D + P +Y+ + H + ++ E
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
+I+ P I +Y + C+ + +A + + + N P Y+ +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE-MRNSGIVPDVITYNTFIGSY 744
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
+ E+ IGV+ M++ GC P ++++ G CK +EA+ +LR
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 208/457 (45%), Gaps = 8/457 (1%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
I+ L + G + A ++++ +EDG + ++ L+ +GR E + V +M E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 299 CRPDVFAYTVLVRILVPQGN-LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
C+P + Y V++ + G + + E+MK D + PD Y T+IT G +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+F+EMK+ G D+ Y +L++ + ++ +L ++V +G+ + YN+LI
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PV 476
++A +L ++G +PD + LL + A ++E+ + ++M G P
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLF 534
I F ++ + +++F + G +S DI +N L+ + G + +F
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
E+ A P+ +++ I + G +QA + ++++ P ++ Y + L +
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGC-PPGNV 653
G +++ ++ + + + P E Y +++HA + ++ L E + G P V
Sbjct: 538 GMWEQSEKVLAE-MEDGRCKPNELTY-CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+ ++ K + EA + FS L+ER + T+
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 191/445 (42%), Gaps = 15/445 (3%)
Query: 246 TGHLDLALS-VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG---RMREKLCRP 301
+G LD LS +++ FK D + + +KGL + D L + ++
Sbjct: 113 SGQLDSVLSELFEPFK-DKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSML 171
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D +++ +L +G + ++ +++D DV +Y ++I+ +N GR E +F
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV----SSGYRADLGIYNNLIEG 417
K+M+ G Y ++ F K+G ++ + LV S G D YN LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVF---GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PV 476
+ ++A ++F+ G D ++ LL +Y ++ R + K+L +M GF P
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFD 535
I S + A+E+ + + EKG V Y L+ + G+++ A+S+F+
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 536 EINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
E+ A KP+ +++ I + + G+ + + ++I P I + L + G
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 596 EIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVC 655
+D + V + P ++ + + E+ + V M+ G P
Sbjct: 469 -MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 656 SAVISGMCKYGTIEEARKVFSNLRE 680
+ V++ + + G E++ KV + + +
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMED 552
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 240/542 (44%), Gaps = 46/542 (8%)
Query: 179 RAADQLPELMDSQGKPPSEKQFEILIRMHSDAG---RGLRVYHVYEKMRNKFGVKPRVFL 235
+A D ++D S K F ++ + + G RGL Y + P
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
+N ++ AL + +D A+ V+ E + T+ L+ GLC+ RIDE + +L M+
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
+ C P Y VL+ L +G+L ++ + M P+ + Y T+I GL G+++
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
+ L + M S + + YG+L+ V + LL + GY + IY+ LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
GL K E+A L++ ++G +P+ +V+Y+
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPN-------IVVYS--------------------V 402
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLF 534
++D L R + P A E+ + + G + + Y+ LM K G ++A+ ++
Sbjct: 403 LVDGLCR-------EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVW 455
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
E++ + F YS+ I +G +K+A +K++ + P AY + KGLC I
Sbjct: 456 KEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGI 515
Query: 595 GEIDEAMMLVRD--CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGN 652
G +D A+ L + C S P Y++ + C D + + +LN M+ +GC P
Sbjct: 516 GSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDV 575
Query: 653 VVCSAVISGMC-KYGTIEEAR----KVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADL 707
+ C+ ++ + K + ++ R ++ L +R+ ++ + TIV + L ++ KT+
Sbjct: 576 ITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIV-EVMLGKYLAPKTSTW 634
Query: 708 VM 709
M
Sbjct: 635 AM 636
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/568 (20%), Positives = 236/568 (41%), Gaps = 74/568 (13%)
Query: 134 EVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGK 193
EV++ +S K F A K + ++ ++ + + ++L + + +
Sbjct: 49 EVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENR 108
Query: 194 PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLAL 253
E+ F ++ R + A + ++ +M ++F K V +N +++ +I G L
Sbjct: 109 VIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 254 SVYDDFKEDGLD----EERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
YD ++ ++F +++K LC+ +D +E
Sbjct: 169 EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIE-------------------- 208
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
V+ M + + PD Y T++ GL R++E +L EM+S+G
Sbjct: 209 ---------------VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGC 253
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
IY L++ + L+ ++ G + YN LI GLC K +KA
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
L + + P+ ++ L+ + +R + +LL ME+ G+
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY--------------- 358
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
+++ IY++L+ L K G+ ++A+SL+ ++ KP+ Y
Sbjct: 359 ------------------HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
S+ + G+ +A E N++I C+P+ Y L KG K G +EA+ + ++ +
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE-MD 459
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
+F YS+ + C ++ + V ++M+ G P V S++I G+C G+++
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 670 EARKVFSN-LRERKLLTESDTIVYDEFL 696
A K++ L + + ++ D + Y+ L
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILL 547
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVID-DLARFFSIFVEKKGPIMALEVFSYLKE--KGYV 509
YA + ++ KLL ++ +I+ F + + P A+++F + + +
Sbjct: 87 YANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKR 146
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLK----PDSFSYSIAILCHVDLGEIKQA 565
SV +N +++ + G + L +D + +N+ P+ S+++ I L + +A
Sbjct: 147 SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRA 206
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
E + E C+P Y L GLCK IDEA++L+ D + + P +Y++ +
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL-DEMQSEGCSPSPVIYNVLID 265
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
CK D +V +++ M +GC P V + +I G+C G +++A + + K +
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI- 324
Query: 686 ESDTIVYDEFLIDHMKKKTA 705
+ + Y + +K++ A
Sbjct: 325 -PNDVTYGTLINGLVKQRRA 343
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHNK 571
+N+++ +L K+ + +A+ +F + PD ++Y + LC + I +A ++
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE--RIDEAVLLLDE 247
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL--GNVTSGPMEFMYSLTVIHA-C 628
+ C PS Y L GLCK G++ LV + G V P E Y+ T+IH C
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV---PNEVTYN-TLIHGLC 303
Query: 629 KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
+K + +L M+ C P +V +I+G+ K +A ++ S++ ER +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY--HLN 361
Query: 689 TIVYDEFLIDHMKKKTADLVMSGLKFFGLESKLKSKGCK 727
+Y + K+ A+ MS L K+ KGCK
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMS------LWRKMAEKGCK 394
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/622 (22%), Positives = 261/622 (41%), Gaps = 66/622 (10%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
+ ++P V ++LK + NP +F F A + GY H+ Y+ ++ ++
Sbjct: 6 KSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
EL+ SQ E +I+ + + V+++MR FG +P + YN +++A +
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
S++ F+ G+ T+ VL+K C+ ++ L M ++ +PDVF
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+Y+ ++ L G LD L +++EM + V PDV Y +I +G++ K+
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILI----------DGFLKEKDH 235
Query: 365 KSKGHLIDRAIYGSLVESFV--------AVNKVGAGFDLLK---DLVSSGYRADLGIYNN 413
K+ L DR + S V V ++K G D LK + + DL Y++
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
LI GLC+ +KA +F + D ++ +L + +++ +L + ME
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS-VDIYNILMDSLHKVGEMKKALS 532
I +E A ++ + KGY + Y I + L G + KAL
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS---------------- 576
+ E+ + D ++Y+ I C L + K+ E N + EMS
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDC---LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 577 ----------------------CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG 614
C P++ +Y L GLCK G+ EA V++ L N
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Query: 615 PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKV 674
++ YS+ + C+ + + + ++ +Q G ++ + +I G+C G +++A V
Sbjct: 533 DLK-TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 675 FSNLRERKLLTESDTIVYDEFL 696
+N+ R ++ + Y+ +
Sbjct: 592 MANMEHRN--CTANLVTYNTLM 611
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 201/455 (44%), Gaps = 5/455 (1%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPE-LMDSQGKPPSEKQFEILIRMHSDAGRG 213
++G + YN + H+ A +L + L++ P+ K I+I S GR
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
++E+M+ K ++ Y+ ++ L G++D A SV+++ E + VT+
Sbjct: 272 DDCLKIWERMKQNEREKD-LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ G C+ G+I E LE L R+ E ++ +Y +L++ L+ G +D +W M
Sbjct: 331 MLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
D Y I GL G V + + +E++S G +D Y S+++ ++
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+L+K++ G + + N LI GL ++ +A + + G P +S L+
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSV 511
+A + +++M + G+ P + + + +ALE++ + G V
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
++NIL+ L VG++ A+++ + N + +Y+ + +G+ +A
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGY 629
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+ +M P I +Y + KGLC + AM D
Sbjct: 630 MYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 142/323 (43%), Gaps = 8/323 (2%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN ++ L+ G +D A ++ G ++ T+ + + GLC G +++ L V+ +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
DV+AY ++ L + L+ + +EM K VE + +I GL R+
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
E +EM G Y L+ K G +K+++ +G++ DL Y+ L+
Sbjct: 482 EASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
GLC K + A +L+ +Q GLE D + L+ ++++ ++ ME
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 476 VIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKA 530
+L + ++ F + A ++ Y+ + G + DI YN +M L + A
Sbjct: 602 A--NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG-LQPDIISYNTIMKGLCMCRGVSYA 658
Query: 531 LSLFDEINGANLKPDSFSYSIAI 553
+ FD+ + P ++++I +
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILV 681
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 1/286 (0%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
KGY + +Y F + + N + A + + ++S G + +I R
Sbjct: 388 KGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEE 447
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
++ ++M +K GV+ + N ++ LIR L A + ++G V++ +L+
Sbjct: 448 ASNLVKEM-SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
GLC+AG+ E + M E +PD+ Y++L+ L +D L +W + + +E
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
DVM + +I GL + G++++ + M+ + + Y +L+E F V +
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ G + D+ YN +++GLC A + F G+ P
Sbjct: 627 WGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 108/268 (40%), Gaps = 3/268 (1%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR-MHSDAGR 212
+ G H + +Y + C+ + A L + M G + LI + D+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
G + + E +N G +P V YN ++ L + G A + + E+G + T+
Sbjct: 481 GEASFFLREMGKN--GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
+L+ GLC+ +ID LE+ + + DV + +L+ L G LD + V M+
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+++ Y T++ G G V++ M G D Y ++++ V
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYA 658
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCN 420
+ D + G + +N L+ + N
Sbjct: 659 MEFFDDARNHGIFPTVYTWNILVRAVVN 686
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 139/578 (24%), Positives = 262/578 (45%), Gaps = 29/578 (5%)
Query: 159 HHNFASYNAFAYCMNRNNHHRAADQLPELMDSQ-------GKPPSEKQFEILIRMHSDAG 211
HH FA + ++ R +D L +S PPS+ F+I + + G
Sbjct: 91 HHKFADAKSLLV-----SYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEG 145
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR---TGHLDLALSVYDDFKEDGLDEER 268
+ +++KM + +KP + N ++ L+R + + A V+DD + G+
Sbjct: 146 KPHVALQIFQKMI-RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
TF VLV G C G++++ L +L RM + PD Y +++ + +G L +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
+MKK+ + P+ + Y ++ G G ++E + + + MK L D Y L+
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
+ G +L+ + S + D+ YN LI+G L +A KL + +G++ + ++
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 448 -PLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKE 505
L L E KR K+ + ++ GF P I +++ ALE+ + +
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 506 KGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
KG ++ N ++D+L K ++ +A +L + + D +Y I+ ++++
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 565 ACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTV 624
A E +++ ++ P+++ + L GLC G+ + AM D L P + ++ +
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF-DELAESGLLPDDSTFNSII 563
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
+ CK EK NE ++ P N C+ +++G+CK G E+A F+ L E +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-- 621
Query: 685 TESDTIVYDE----FLIDHMKKKTADLVMSGLKFFGLE 718
E DT+ Y+ F D K+ DL +S ++ GLE
Sbjct: 622 -EVDTVTYNTMISAFCKDKKLKEAYDL-LSEMEEKGLE 657
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 232/483 (48%), Gaps = 9/483 (1%)
Query: 198 KQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYD 257
+ F +L+ + G+ + E+M ++F V P YN I+ A+ + G L +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 258 DFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG 317
D K++GL RVT+ LV G C+ G + E +++ M++ PD+ Y +L+ L G
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
++ L + + MK +++PDV+ Y T+I G G E L ++M++ G ++ +
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 378 SLVESFVAVNKVGAGFDLLKDLVS-SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
++ K A +K+LV G+ D+ Y+ LI+ + A ++ + Q
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 437 EGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR---FFSIFVEKKGP 493
+G++ + +++ +L + ++++ + LL K GF ++D++ F E+K
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF-IVDEVTYGTLIMGFFREEKVE 503
Query: 494 IMALEVFSYLKE-KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
ALE++ +K+ K +V +N L+ L G+ + A+ FDE+ + L PD +++
Sbjct: 504 -KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSI 562
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
IL + G +++A E +N+ I+ S P L GLCK G ++A+ +
Sbjct: 563 ILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEERE 622
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
+ Y+ + CK ++ +L+EM ++G P ++ IS + + G + E
Sbjct: 623 VDTV--TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 673 KVF 675
++
Sbjct: 681 ELL 683
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 188/420 (44%), Gaps = 11/420 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K+ G N +YN Y + + A Q+ ELM P + ILI +AG
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ + M++ ++P V YN ++D G A + + + DG+ +VT +
Sbjct: 327 REGLELMDAMKS-LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI 385
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLC-----RPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
+K LC+ +E E + R ++L PD+ Y L++ + G+L G L + E
Sbjct: 386 SLKWLCK----EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M + ++ + + TI+ L +++E + L +G ++D YG+L+ F K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
V ++ ++ + +N+LI GLC+ K E A + F + GL PD +
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKG 507
+++ Y + R+E ++ + K F + + K+G AL F+ L E+
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
V YN ++ + K ++K+A L E+ L+PD F+Y+ I ++ G++ + E
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 171/384 (44%), Gaps = 27/384 (7%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L E M++ G ++ I ++ + V +++ + G P + Y+ ++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
A ++ G L AL + + + G+ +T ++ LC+ ++DE +L ++
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
D Y L+ + ++ L +W+EMKK ++ P V + ++I GL + G+ E
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F E+ G L D + + S++ + +V F+ + + ++ D N L+ GLC
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL 480
EKA F I+E E D ++ ++ + + K+++ Y LL +ME+ G +
Sbjct: 604 EGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL----EP 658
Query: 481 ARF-FSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEING 539
RF ++ F+ S L E G +S + +L K G MK+ L + E N
Sbjct: 659 DRFTYNSFI------------SLLMEDGKLS-ETDELLKKFSGKFGSMKRDLQVETEKNP 705
Query: 540 AN------LKPDSFSYSIAI--LC 555
A L ++ +YS I LC
Sbjct: 706 ATSESKEELNTEAIAYSDVIDELC 729
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 225/497 (45%), Gaps = 4/497 (0%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS +F L+ + + V + EKM+ + G+ ++ YN +++ R + LAL+
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ + G + VT L+ G C RI + + ++ +M E RPD +T L+ L
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+ + + M + +P+++ Y ++ GL G ++ + L +M++ +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
IY ++++S +L ++ + G R ++ Y++LI LCN ++ A +L
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGP 493
I+ + P+ ++ L+ + + ++ KL +M K P I + + F
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 494 IMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
A +F + K + +V YN L++ K + + + LF E++ L ++ +Y+
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I + A +++ P+I Y L GLCK G++++A M+V + L
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA-MVVFEYLQRSK 500
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P + Y++ + CK+ E + + +G P ++ + +ISG C+ G EEA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 673 KVFSNLRERKLLTESDT 689
+F +RE L +S T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 208/453 (45%), Gaps = 7/453 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G HN +YN C R + A L M G PS L+ + R
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ ++M + G +P + ++ L A+++ D + G VT+ V+V
Sbjct: 175 VALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GLC+ G ID +L +M +V Y+ ++ L + D L ++ EM+ V P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+V+ Y+++I+ L N R + L +M + + + +L+++FV K+ L
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+++ D+ Y++LI G C ++ ++A +F++ I + P+ ++ L+ + +A
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKG-YVSVD 512
KR++ +L ++M + G ++ + + ++ F + + A VF + G + ++
Sbjct: 414 KRIDEGVELFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
YN L+D L K G+++KA+ +F+ + + ++P ++Y+I I G+++ + +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
P + Y + G C+ G +EA L R
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFR 564
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 175/400 (43%), Gaps = 36/400 (9%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ GY + ++ + + +N A L + M +G P+ + +++ G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+++ KM ++ V +Y+ ++D+L + H D AL+++ + + G+ +T+ L
Sbjct: 243 LAFNLLNKMEAA-KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ LC R + +L M E+ P+V + L+ V +G L ++++EM K +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD+ Y+++I G R++E +F+ M SK + Y +L+ F ++ G +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L +++ G + Y LI G + A +F+ + +G+ P+ ++ LL
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDI 513
+ ++E A+ VF YL + K ++
Sbjct: 482 KNGKLEK----------------------------------AMVVFEYLQRSKMEPTIYT 507
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
YNI+++ + K G+++ LF ++ +KPD Y+ I
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 194/457 (42%), Gaps = 57/457 (12%)
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
+L GL + ++D+ + + G M + P +F + L+ + D + + E+M++
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ ++ Y +I ++ L +M G+ SL+ + ++
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
L+ +V GYR D + LI GL NK +A L +Q G +P+ ++ ++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 453 YAEAKRMENFYKLLQQMEKLGF--------PVIDDLARF------FSIFVEKKGPIMALE 498
+ ++ + LL +ME VID L ++ ++F E + +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 499 VFSY-----------------------LKEKGYVSVDIYNILMDSLHKVGEMKKALSLFD 535
V +Y ++ K +V +N L+D+ K G++ +A L+D
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 536 EINGANLKPDSFSYSIAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
E+ ++ PD F+YS I C H L E K E +I C P++ Y L G C
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLINGFC 411
Query: 593 KIGEIDEAMMLVRD-----CLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVLNEMMQQ 646
K IDE + L R+ +GN + Y+ T+IH ++ D + V +M+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVT------YT-TLIHGFFQARDCDNAQMVFKQMVSD 464
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
G P + + ++ G+CK G +E+A VF L+ K+
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 169/390 (43%), Gaps = 5/390 (1%)
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
LD + ++ M K R P + + +++ ++ + + L ++M+ G + Y
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
L+ F +++ LL ++ GY + ++L+ G C+ + A L ++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 439 LEPDFLSVKPLL-VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMAL 497
PD ++ L+ L+ K E + + +++ P + + ++ +A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 498 EVFSYLK-EKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCH 556
+ + ++ K +V IY+ ++DSL K AL+LF E+ ++P+ +YS I C
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
+ A + +IE P++ + L K G++ EA L + + + P
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPD 364
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
F YS + C + ++ + M+ + C P V + +I+G CK I+E ++F
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 677 NLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
+ +R L+ +T+ Y + + + D
Sbjct: 425 EMSQRGLV--GNTVTYTTLIHGFFQARDCD 452
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/586 (23%), Positives = 262/586 (44%), Gaps = 28/586 (4%)
Query: 139 QTNPTLSFKFFHWAEKQKGYHHNFASYNAFAY--CMNR--NNHHRAADQLPELMDSQGKP 194
Q + + + + F WA G+ H+ ++Y A + C+ R + ++ D++P DS G P
Sbjct: 53 QKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP---DSIGLP 109
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P + F +IR A RV V + + +KFG+KP + ++N I+D L++ +D+A
Sbjct: 110 PDDAIFVTIIRGFGRARLIKRVISVVD-LVSKFGIKPSLKVFNSILDVLVKE-DIDIARE 167
Query: 255 VYD-DFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRIL 313
+ G+ + T+ +L+KGL RI + ++L M+ P+ Y L+ L
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHAL 227
Query: 314 VPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDR 373
G + + EMK EP+ + + +I+ N ++ + VL ++ S G + D
Sbjct: 228 CKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDV 283
Query: 374 AIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
++E +V ++L+ + S G + D+ N L++G C L K A + F
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIE 343
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME----KLGFPVIDDLARFFSIFVE 489
++G P+ + L+ Y + +++ M+ + F + L R SI
Sbjct: 344 MERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGR 403
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
+ LE+ +D YN ++ +K + AL + L P +
Sbjct: 404 TDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL--LKMEKLFPRAVDR 461
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
S ++ + G + ++++I +PSI CL + G+I+E++ L+ D
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM-- 519
Query: 610 NVTSG--PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGT 667
VT G P ++ +I CK + I + +M ++GC P + ++ +C G
Sbjct: 520 -VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGD 578
Query: 668 IEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSGLK 713
I++A +FS + E+ ++ D ++ + + +KTA V S L+
Sbjct: 579 IQKAWLLFSRMVEKSIV--PDPSMWSSLMF-CLSQKTAIHVNSSLQ 621
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 240/550 (43%), Gaps = 44/550 (8%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
FH ++G+ S N ++ + A+ L ++D G P+ F LI
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDC-GPAPNVVTFCTLINGFC 297
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
G R + +++ M + G++P + Y+ ++D + G L + ++ G+ +
Sbjct: 298 KRGEMDRAFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDV 356
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V F + ++G + V RM + P+V YT+L++ L G + ++ +
Sbjct: 357 VVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQ 416
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
+ K +EP ++ Y+++I G G + G+ L+++M G+ D IYG LV+
Sbjct: 417 ILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ ++ R ++ ++N+LI+G C LN+F++A K+F++ G++PD +
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
++ ME+ F + P + L++F L ++
Sbjct: 537 VM----RVSIMED------------------------AFCKHMKPTIGLQLFD-LMQRNK 567
Query: 509 VSVDIY--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
+S DI N+++ L K ++ A F+ + ++PD +Y+ I + L + +A
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA- 626
Query: 567 ECHNKIIEMSCI----PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL 622
+I E+ + P+ L LCK ++D A+ + + S P Y
Sbjct: 627 ---ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGC 682
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ KS D E + EM ++G P V S +I G+CK G ++EA +F + K
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 683 LLTESDTIVY 692
LL D + Y
Sbjct: 743 LL--PDVVAY 750
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 142/675 (21%), Positives = 285/675 (42%), Gaps = 107/675 (15%)
Query: 122 SKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAA 181
S L+R +LV +L +++ P + K+F WAE S+ A+ + RN A
Sbjct: 65 SNLQRNETNLV--LLSLESEPNSALKYFRWAE----ISGKDPSFYTIAHVLIRNGMFDVA 118
Query: 182 DQL-PELMDSQGKPPS----------------------------EKQFEILI-------- 204
D++ E++ ++GK + +K EI +
Sbjct: 119 DKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVV 178
Query: 205 -------RMHSDAGRGLRVYHVYEKMRN--KFGVKPR-VFLYNRIMDALIRTGHLDLALS 254
RM + RV + + + G++P V + ++DAL G + AL
Sbjct: 179 IPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALD 238
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ E G V+ ++KGL +I+ +L + + P+V + L+
Sbjct: 239 FHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+G +D +++ M++ +EPD++AY+T+I G G + G+ LF + KG +D
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
++ S ++ +V + + K ++ G ++ Y LI+GLC + +A ++
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE---KK 491
++ G+EP ++ L+ + + + + + L + M K+G+P D+ + + V+ K+
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP--PDVV-IYGVLVDGLSKQ 474
Query: 492 GPIMALEVFSY--LKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
G ++ FS L + ++V ++N L+D ++ +AL +F + +KPD ++
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 550 SIAI-----------------------------------LCHVDL------GEIKQACEC 568
+ + +C+V + I+ A +
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
N +IE P I Y + G C + +DEA + + L GP ++ + C
Sbjct: 595 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLC 653
Query: 629 KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
K+ND + I + + M ++G P V ++ K IE + K+F ++E+ + S
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI---SP 710
Query: 689 TIVYDEFLIDHMKKK 703
+IV +ID + K+
Sbjct: 711 SIVSYSIIIDGLCKR 725
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 152 bits (384), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 218/485 (44%), Gaps = 38/485 (7%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ P + Y+ ++D L + L+ A S+ + G+ + T+ +L+ GL + D
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
++ M + Y + ++ +G ++ +++ M + P AYA++I G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
V +GY L EMK + +I YG++V+ + + ++++K++++SG R +
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ IY LI+ ++F A ++ + ++G+ PD L++ ++AKRM+ L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 468 QMEKLGF-PVIDDLARFFSIFVE----------------------------------KKG 492
+M + G P F S ++E KKG
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 493 PIM-ALEVFSYLKEKGYVS-VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
++ A + + ++G + Y +LM+ L K ++ A +F E+ G + PD FSY
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 551 IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGN 610
+ I LG +++A ++++E P++ Y L G C+ GEI++A L+ D +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL-DEMSV 690
Query: 611 VTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEE 670
P Y + CKS D + + +EM +G P + V + ++ G C+ +E
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 671 ARKVF 675
A +F
Sbjct: 751 AITIF 755
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/532 (23%), Positives = 233/532 (43%), Gaps = 39/532 (7%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV 233
+ + AA L M S G ++ I + S G + +++ M G+ P+
Sbjct: 324 KGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS-GLIPQA 382
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
Y +++ R ++ + + K+ + T+ +VKG+C +G +D ++
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKE 442
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
M CRP+V YT L++ + +RV +EMK+ + PD+ Y ++I GLS R
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
++E EM G + YG+ + ++ ++ + +K++ G + +
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
LI C K +A ++ + +G+ D K VL M +K +
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGD---AKTYTVL------MNGLFKNDK------ 607
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSL 533
+DD IF E +G +A +VFS Y +L++ K+G M+KA S+
Sbjct: 608 ---VDDAEE---IFREMRGKGIAPDVFS------------YGVLINGFSKLGNMQKASSI 649
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
FDE+ L P+ Y++ + GEI++A E +++ P+ Y + G CK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
G++ EA L D + P F+Y+ V C+ ND E+ I + ++GC
Sbjct: 710 SGDLAEAFRLF-DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTA 767
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKL--LTESDTIVYDEFLIDHMKKK 703
+A+I+ + K+G E +V + L + + + + Y+ +ID++ K+
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN-IMIDYLCKE 818
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/564 (22%), Positives = 237/564 (42%), Gaps = 28/564 (4%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
+Y M + A + + M + G P+ + LI+ R V ++M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
+ + G+ P +F YN ++ L + +D A S + E+GL T+ + G +A
Sbjct: 479 KEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+ + MRE P+ T L+ +G + + M + D Y
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
++ GL +V++ +F+EM+ KG D YG L+ F + + + ++V G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY 463
++ IYN L+ G C + EKA +L +GL P+ ++ ++ Y ++ + +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 464 KLLQQMEKLGF--------PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
+L +M+ G ++D R VE+ A+ +F K+ S +N
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLND--VER-----AITIFGTNKKGCASSTAPFN 770
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANL----KPDSFSYSIAILCHVDLGEIKQACECHNK 571
L++ + K G+ + + + + + KP+ +Y+I I G ++ A E ++
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN 631
+ + +P++ Y L G K+G E M V D P MYS+ + K
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAE-MFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 632 DAEKVIGVLNEM-----MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
K + ++++M + GC C A++SG K G +E A KV N+ + + +
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 687 SDTIV--YDEFLIDHMKKKTADLV 708
S T++ +E I ++ AD V
Sbjct: 950 SATVIELINESCISSNQRVEADAV 973
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 206/460 (44%), Gaps = 17/460 (3%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K++G + YN+ +++ A M G P+ + I + +A
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
++MR + GV P L +++ + G + A S Y + G+ + T+ V
Sbjct: 539 ASADKYVKEMR-ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ GL + ++D+ E+ MR K PDVF+Y VL+ GN+ +++EM ++
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ P+V+ Y ++ G G +E+ L EM KG + Y ++++ + + F
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
L ++ G D +Y L++G C LN E+A +F T ++G L+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 454 AEAKRMENFYKLLQQM-----EKLGFPVIDDLARFFSI-FVEKKGPIMAL-EVFSYLKEK 506
+ + E ++L ++ ++ G P +D+ I ++ K+G + A E+F ++
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKP--NDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 507 GYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
+ +V Y L++ K+G + +FDE A ++PD YS+ I + G +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 566 CECHNKI-----IEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
+++ ++ C SI+ + L G K+GE++ A
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 142/650 (21%), Positives = 257/650 (39%), Gaps = 109/650 (16%)
Query: 127 VTPSLVAEVLKVQ--TNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
+ P +V VL+ + +P+ FF+W + QK S++ A + A +
Sbjct: 60 INPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSV 119
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGR---GLRVYHVYEKMRNKFGVKPRVFLYNR--- 238
E M + P +E I+ G+ G+ +++ K ++ VF+++
Sbjct: 120 VERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMG 179
Query: 239 ------------IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDE 286
++DAL+R LDL VY E + + T+ +L+ C+AG +
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQL 239
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
+VL + ++ F L N+DG L++ E M + P Y +I
Sbjct: 240 GKDVLFKTEKE------FRTATL--------NVDGALKLKESMICKGLVPLKYTYDVLID 285
Query: 347 GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA 406
GL R+E+ L EM S G +D Y L++ + A L+ ++VS G
Sbjct: 286 GLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
+Y+ I + EKA LF I GL P + L+ Y K + Y+LL
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 467 QQMEKL--------------GFPVIDDLARFFSI----------------------FVEK 490
+M+K G DL ++I F++
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 491 KGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
A+ V +KE+G ++ DI YN L+ L K M +A S E+ LKP++F+
Sbjct: 466 SRFGDAMRVLKEMKEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 549 YSIAILCHVDL-----------------------------------GEIKQACECHNKII 573
Y I +++ G++ +AC + ++
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
+ + Y L GL K ++D+A + R+ G + P F Y + + K +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNM 643
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
+K + +EM+++G P ++ + ++ G C+ G IE+A+++ + + L
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 180/410 (43%), Gaps = 41/410 (10%)
Query: 149 FHWAEKQK-GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMH 207
+ W + Q G HN + N C R + A M G PS F L+
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 208 SDAGRGLRVY---HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
RG RVY +++++M G KP V +YN I+D L ++ +D AL + + ++DG+
Sbjct: 162 C---RGDRVYDALYMFDQMVG-MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ VT+ L+ GLC +GR + ++ M ++ PDVF + L+ V +G +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
+EEM + ++PD++ Y+ +I GL R++E +F M SKG D Y L+ +
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
KV G L ++ G + Y LI+G C K A ++F+ + G+ P+ +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK 504
+ LL + ++E +L M+K G
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMD----------------------------- 428
Query: 505 EKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
+ YNI++ + K GE+ A ++ +N L PD ++Y+ +L
Sbjct: 429 ----ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 203/421 (48%), Gaps = 10/421 (2%)
Query: 191 QGKP-PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
Q +P PS F L+ S + V +++E+M+ G+ + N +++ R L
Sbjct: 74 QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ-MLGIPHNLCTCNILLNCFCRCSQL 132
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
LALS + G + VTF L+ G C+ R+ + L + +M +P+V Y +
Sbjct: 133 SLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
+ L +D L + M+KD + PDV+ Y ++I+GL + GR + + M +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
D + +L+++ V +V + ++++ D+ Y+ LI GLC ++ ++A +
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
+F + +G PD ++ L+ Y ++K++E+ KL +M + G V+ + + +I ++
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG--VVRNTVTY-TILIQ 369
Query: 490 ---KKGPI-MALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP 544
+ G + +A E+F + G + ++ YN+L+ L G+++KAL + ++ +
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 545 DSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
D +Y+I I GE+ A + + + +P I Y + GL K G EA L
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 605 R 605
R
Sbjct: 490 R 490
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/416 (18%), Positives = 170/416 (40%), Gaps = 46/416 (11%)
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
++D+ L++ M + P + ++ L+ + D + +WE+M+ + ++
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
++ ++ +M GH +GSL+ F ++V + +V
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
GY+ ++ IYN +I+GLC + + A L ++G+ PD ++ L+ + R +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
+++ M K + Y V +N L+D+
Sbjct: 241 TRMVSCMTK---------------------------------REIYPDVFTFNALIDACV 267
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K G + +A ++E+ +L PD +YS+ I + +A E ++ C P +
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 583 AYKCLTKGLCKIGEIDEAMMLV-----RDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVI 637
Y L G CK +++ M L R + N + Y++ + C++
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT------YTILIQGYCRAGKLNVAE 381
Query: 638 GVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYD 693
+ M+ G P + + ++ G+C G IE+A + +++++ + ++D + Y+
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM--DADIVTYN 435
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/566 (22%), Positives = 236/566 (41%), Gaps = 58/566 (10%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEI 202
+ H A+ G+ SYNA A ++ N A + E+++SQ P+ + I
Sbjct: 153 ALSIVHLAQAH-GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNI 210
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
LIR AG +++KM K G P V YN ++D + +D +
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
GL+ +++ V++ GLC+ GR+ E+ VL M + D Y L++ +GN
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
L + EM + + P V+ Y ++I + G + +M+ +G + Y +LV+
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
F + + +L+++ +G+ + YN LI G C K E A + + ++GL PD
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSY 502
+S +L + + ++ AL V
Sbjct: 450 VVSYSTVLSGFCRSYDVDE----------------------------------ALRVKRE 475
Query: 503 LKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
+ EKG I Y+ L+ + K+A L++E+ L PD F+Y+ I + G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
+++A + HN+++E +P + Y L GL K EA L+ L S P + Y
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK-LFYEESVPSDVTYH 594
Query: 622 LTVIHACKSNDAEKVIG----------------VLNEMMQQGCPPGNVVCSAVISGMCKY 665
T+I C + + + V+ V M+ + P + +I G C+
Sbjct: 595 -TLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 666 GTIEEARKVFSNLRERKLLTESDTIV 691
G I +A ++ + + L + T++
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVI 679
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 215/503 (42%), Gaps = 30/503 (5%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
KG N SYN + R + + M+ +G E + LI+ + G +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
++ +M + G+ P V Y ++ ++ + G+++ A+ D + GL T+ LV
Sbjct: 329 ALVMHAEML-RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
G Q G ++E VL M + P V Y L+ G ++ + V E+MK+ +
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
PDV++Y+T+++G V+E + +EM KG D Y SL++ F + DL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
++++ G D Y LI C EKA +L +++G+ PD ++ L+ +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-----MALEVFSYLKEKGYVS 510
R +LL +F E+ P +E S ++ K VS
Sbjct: 568 QSRTREAKRLL-----------------LKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
L+ G M +A +F+ + G N KPD +Y+I I H G+I++A +
Sbjct: 611 ------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
++++ + L K L K G+++E ++ L + E L I+ +
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH-RE 723
Query: 631 NDAEKVIGVLNEMMQQGCPPGNV 653
+ + V+ VL EM + G P +
Sbjct: 724 GNMDVVLDVLAEMAKDGFLPNGI 746
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 174/427 (40%), Gaps = 72/427 (16%)
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY-TVLVRILVPQGNLDGCLRVWEEM 329
F ++VK + ID+ L ++ + P V +Y VL + + N+ V++EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+ +V P+V Y +I G G ++ LF +M++KG
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG--------------------- 235
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
L ++V+ YN LI+G C L K + KL + +GLEP+ +S +
Sbjct: 236 -----CLPNVVT---------YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
+ RM+ +L +M + G+ +D++
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYS-LDEVT---------------------------- 312
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
YN L+ K G +AL + E+ L P +Y+ I G + +A E
Sbjct: 313 ----YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
+++ P+ Y L G + G ++EA ++R+ N S P Y+ + C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFS-PSVVTYNALINGHCV 427
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ E I VL +M ++G P V S V+SG C+ ++EA +V + E+ + + DT
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--KPDT 485
Query: 690 IVYDEFL 696
I Y +
Sbjct: 486 ITYSSLI 492
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 132/327 (40%), Gaps = 43/327 (13%)
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR----MENFYK 464
+++ +++ L+ +KA + + G P LS +L +KR EN +K
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 465 LLQQMEK-----------LGFPVIDDLARFFSIF--VEKKGPIMALEVFSYLKEKGYV-- 509
+ + + GF ++ ++F +E KG + + ++ L + GY
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID-GYCKL 253
Query: 510 --------------------SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
++ YN++++ L + G MK+ + E+N D +Y
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
+ I + G QA H +++ PS+ Y L +CK G ++ AM + D +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL-DQMR 372
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
P E Y+ V + + VL EM G P V +A+I+G C G +E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 670 EARKVFSNLRERKLLTESDTIVYDEFL 696
+A V +++E+ L D + Y L
Sbjct: 433 DAIAVLEDMKEKGL--SPDVVSYSTVL 457
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
Query: 499 VFSYLKEK---GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
VF L+E Y + ++++++ S ++ + KALS+ P SY+ +
Sbjct: 119 VFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA 178
Query: 556 HV-DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMML-----VRDCLG 609
+ I A +++E P++ Y L +G C G ID A+ L + CL
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
NV + Y+ + CK + +L M +G P + + VI+G+C+ G ++
Sbjct: 239 NVVT------YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMK 292
Query: 670 EARKVFSNLRER 681
E V + + R
Sbjct: 293 EVSFVLTEMNRR 304
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/600 (22%), Positives = 256/600 (42%), Gaps = 41/600 (6%)
Query: 118 VTELSKLRRVTP---------------SLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNF 162
+T + KLRR P L+ ++K++ + L FF WA ++ N
Sbjct: 62 ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNL 119
Query: 163 ASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQF----EILIRMHSDAGRGLRVYH 218
S + + + A L + K F ++L+ + D G RV+
Sbjct: 120 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 219 VYEKMRNKFGV---KPRVF--LYNRIMDALIRTGHLDL------------ALSVYDDFKE 261
V+ ++ FG+ RVF + N + + + ++ L A+ V+ +F E
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
G+ ++ +++ +CQ GRI E +L M K PDV +Y+ +V G LD
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
++ E MK+ ++P+ Y +II L ++ E F EM +G L D +Y +L++
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
F + A ++ S D+ Y +I G C + +A KLF +GLEP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVF 500
D ++ L+ Y +A M++ +++ M + G P + ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 501 SYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
+ + G ++ YN +++ L K G +++A+ L E A L D+ +Y+ + +
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
GE+ +A E +++ P+I + L G C G +++ L+ L + P
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATT 598
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
++ V C N+ + + +M +G P ++ G CK ++EA +F ++
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 3/394 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K+KG N Y + + R A++ M QG P + LI G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +M ++ + P V Y I+ + G + A ++ + GL+ + VTF
Sbjct: 368 RAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G C+AG + + V M + C P+V YT L+ L +G+LD + EM K
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++P++ Y +I+ GL G +EE L E ++ G D Y +L++++ ++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
++LK+++ G + + +N L+ G C E KL + +G+ P+ + L+ Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSV 511
++ + + M G P + + A +F +K KG+ VSV
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPD 545
Y++L+ K + +A +FD++ L D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 211/553 (38%), Gaps = 72/553 (13%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N ASYN + + + + A L LM+ +G P + ++ + G +V
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ + E M+ K G+KP ++Y I+ L R L A + + G+ + V + L+
Sbjct: 301 WKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
G C+ G I + M + PDV YT ++ G++ +++ EM +EP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
D + + +I G G +++ + + M G + Y +L++ + + +LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
++ G + ++ YN+++ GLC E+A KL GL D ++ L+ Y ++
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
M+ ++L++M G ++ +N+
Sbjct: 540 GEMDKAQEILKEMLGKGLQ---------------------------------PTIVTFNV 566
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
LM+ G ++ L + + + P++ +++ + + +K A + +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV 636
P Y+ L KG CK + EA L
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFL--------------------------------- 653
Query: 637 IGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
EM +G S +I G K EAR+VF +R L +D ++D F
Sbjct: 654 ---FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL--AADKEIFDFFS 708
Query: 697 IDHMKKKTADLVM 709
K K D ++
Sbjct: 709 DTKYKGKRPDTIV 721
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/600 (22%), Positives = 256/600 (42%), Gaps = 41/600 (6%)
Query: 118 VTELSKLRRVTP---------------SLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNF 162
+T + KLRR P L+ ++K++ + L FF WA ++ N
Sbjct: 62 ITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNL 119
Query: 163 ASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQF----EILIRMHSDAGRGLRVYH 218
S + + + A L + K F ++L+ + D G RV+
Sbjct: 120 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 219 VYEKMRNKFGV---KPRVF--LYNRIMDALIRTGHLDL------------ALSVYDDFKE 261
V+ ++ FG+ RVF + N + + + ++ L A+ V+ +F E
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
G+ ++ +++ +CQ GRI E +L M K PDV +Y+ +V G LD
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
++ E MK+ ++P+ Y +II L ++ E F EM +G L D +Y +L++
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
F + A ++ S D+ Y +I G C + +A KLF +GLEP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVF 500
D ++ L+ Y +A M++ +++ M + G P + ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 501 SYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
+ + G ++ YN +++ L K G +++A+ L E A L D+ +Y+ + +
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
GE+ +A E +++ P+I + L G C G +++ L+ L + P
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATT 598
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
++ V C N+ + + +M +G P ++ G CK ++EA +F ++
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 3/394 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K+KG N Y + + R A++ M QG P + LI G
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +M ++ + P V Y I+ + G + A ++ + GL+ + VTF
Sbjct: 368 RAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G C+AG + + V M + C P+V YT L+ L +G+LD + EM K
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++P++ Y +I+ GL G +EE L E ++ G D Y +L++++ ++
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
++LK+++ G + + +N L+ G C E KL + +G+ P+ + L+ Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSV 511
++ + + M G P + + A +F +K KG+ VSV
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPD 545
Y++L+ K + +A +FD++ L D
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 211/553 (38%), Gaps = 72/553 (13%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N ASYN + + + + A L LM+ +G P + ++ + G +V
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ + E M+ K G+KP ++Y I+ L R L A + + G+ + V + L+
Sbjct: 301 WKLIEVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
G C+ G I + M + PDV YT ++ G++ +++ EM +EP
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
D + + +I G G +++ + + M G + Y +L++ + + +LL
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
++ G + ++ YN+++ GLC E+A KL GL D ++ L+ Y ++
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
M+ ++L++M G ++ +N+
Sbjct: 540 GEMDKAQEILKEMLGKGLQ---------------------------------PTIVTFNV 566
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
LM+ G ++ L + + + P++ +++ + + +K A + +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV 636
P Y+ L KG CK + EA L
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFL--------------------------------- 653
Query: 637 IGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
EM +G S +I G K EAR+VF +R L +D ++D F
Sbjct: 654 ---FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL--AADKEIFDFFS 708
Query: 697 IDHMKKKTADLVM 709
K K D ++
Sbjct: 709 DTKYKGKRPDTIV 721
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 126/547 (23%), Positives = 231/547 (42%), Gaps = 47/547 (8%)
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
L E M + G + + ILI + V KM K G +P + N +++
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM-KLGYEPDIVTLNSLLNG 160
Query: 243 LIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+ A+S+ E G + TF L+ GL + R E + ++ RM K C+PD
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
+ Y ++V L +G++D L + ++M++ ++EP V+ Y TII L N V + LF
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EM +KG + Y SL+ + LL D++ ++ ++ LI+
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVIDDLA 481
K +A KL+ I+ ++PD + L+ + R++ + + M K FP +
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGA 540
F + K +E+F + ++G V + Y L+ + E A +F ++
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
+ PD +YSI + + G+++ A + P I Y + +G+CK G++++
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 601 MMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVIS 660
+ SL++ +G P V + ++S
Sbjct: 521 ---------------WDLFCSLSL---------------------KGVKPNVVTYTTMMS 544
Query: 661 GMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM----KKKTADLV--MSGLKF 714
G C+ G EEA +F ++E L +S T Y+ + H+ K +A+L+ M +F
Sbjct: 545 GFCRKGLKEEADALFREMKEEGPLPDSGT--YNTLIRAHLRDGDKAASAELIREMRSCRF 602
Query: 715 FGLESKL 721
G S +
Sbjct: 603 VGDASTI 609
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 201/482 (41%), Gaps = 57/482 (11%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +++++ A+ + DL +S+ + + G+ T+ +L+ C+ ++ L V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
L +M + PD+ L+ + + + +M + +PD + T+I GL
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
R E L M KG D YG +V + LLK + + I
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN +I+ LCN A LF +G+ P+ ++ L+ R
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS---------- 308
Query: 471 KLGFPVIDDLARFFSIFVEKK-GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKK 529
D +R S +E+K P +V ++ L+D+ K G++ +
Sbjct: 309 --------DASRLLSDMIERKINP----------------NVVTFSALIDAFVKEGKLVE 344
Query: 530 ALSLFDEINGANLKPDSFSYSIAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
A L+DE+ ++ PD F+YS I C H L E K E +I C P++ Y
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNT 401
Query: 587 LTKGLCKIGEIDEAMMLVRD-----CLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVL 640
L KG CK +DE M L R+ +GN + Y+ T+IH ++ + + V
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVT------YT-TLIHGFFQARECDNAQIVF 454
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM 700
+M+ G P + S ++ G+C G +E A VF L+ K+ E D Y+ +I+ M
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM--EPDIYTYN-IMIEGM 511
Query: 701 KK 702
K
Sbjct: 512 CK 513
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 210/494 (42%), Gaps = 54/494 (10%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ GY + ++N + + R+N A L + M +G P + I++ G
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ +KM ++P V +YN I+DAL +++ AL+++ + G+ VT+ L
Sbjct: 239 LALSLLKKMEQG-KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
++ LC GR + +L M E+ P+V ++ L+ V +G L ++++EM K +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD+ Y+++I G R++E +F+ M SK + Y +L++ F +V G +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L +++ G + Y LI G + + A +F+ + +G+ PD ++ LL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDI 513
++E AL VF YL + K +
Sbjct: 478 NNGKVET----------------------------------ALVVFEYLQRSKMEPDIYT 503
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
YNI+++ + K G+++ LF ++ +KP+ +Y+ + G ++A ++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
E +P Y L + + G+ + L+R+ + +C+
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE------------------MRSCRFVGD 605
Query: 634 EKVIGVLNEMMQQG 647
IG++ M+ G
Sbjct: 606 ASTIGLVTNMLHDG 619
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
Q+G N +Y + + A + + M S G P + IL+ + G+
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
V+E ++ + ++P ++ YN +++ + + G ++ ++ G+ VT+ +
Sbjct: 484 TALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C+ G +E + M+E+ PD Y L+R + G+ + EM+ R
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Query: 335 EPDVMAYATIITGLSNGGRVEEGYV 359
D ++T + + GR+++ ++
Sbjct: 603 VGDASTIG-LVTNMLHDGRLDKSFL 626
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 213/481 (44%), Gaps = 38/481 (7%)
Query: 125 RRVTPSLVAEVLK-VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
+ + P + EV+K + NP + F+F+ ++ + H+F +YN + + H A Q
Sbjct: 65 KNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQ 124
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
+ E M S G P+ + L+ ++ G+ ++ + F V+ + N +++ L
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGK---LHFATALLLQSFEVEGCCMVVNSLLNTL 181
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
++ ++ A+ ++D+ + TF +L++GLC G+ ++ LE+LG M C PD+
Sbjct: 182 VKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRV-EPDVMAYATIITGLSNGGRVEEGYVLFK 362
Y L++ L+ +++++K V PDV+ Y ++I+G G++ E L
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
+M G + LV+ + ++ ++ ++S G D+ + +LI+G C +
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
+ + +L++ G+ P+ + L+ + N +LL+ E LG D+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILI------NALCNENRLLKARELLGQLASKDII- 414
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
P M YN ++D K G++ +A + +E+
Sbjct: 415 --------PQPFM------------------YNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
KPD +++I I+ H G + +A +K++ + C P L L K G EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 603 L 603
L
Sbjct: 509 L 509
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 43/406 (10%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE-EGY 358
R + Y +L R L G D +++E MK D V P+ +++ + G++
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+L + + +G + + SL+ + V +++V L + + D +N LI GL
Sbjct: 160 LLLQSFEVEGCCM---VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID 478
C + K EKA +L V G EPD ++ Y L Q GF +
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVT-----------------YNTLIQ----GFCKSN 255
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDE 536
+L + A E+F +K S D+ Y ++ K G+M++A SL D+
Sbjct: 256 ELNK-------------ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 537 INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGE 596
+ + P + ++++ + + GE+ A E K+I C P + + L G C++G+
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
+ + L + + P F YS+ + C N K +L ++ + P + +
Sbjct: 363 VSQGFRLWEE-MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 657 AVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
VI G CK G + EA + + ++K + D I + +I H K
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKK--CKPDKITFTILIIGHCMK 465
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L +M G P + LI+ + + +++ +++ P V Y ++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
+ G + A S+ DD G+ VTF VLV G +AG + E+ G+M C
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
PDV +T L+ G + R+WEEM + P+ Y+ +I L N R+ + L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
++ SK + +Y +++ F KV +++++ + D + LI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
+ +A +F + G PD ++V LL +A + Y L Q K
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 213/481 (44%), Gaps = 38/481 (7%)
Query: 125 RRVTPSLVAEVLK-VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
+ + P + EV+K + NP + F+F+ ++ + H+F +YN + + H A Q
Sbjct: 65 KNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQ 124
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
+ E M S G P+ + L+ ++ G+ ++ + F V+ + N +++ L
Sbjct: 125 MFECMKSDGVSPNNRLLGFLVSSFAEKGK---LHFATALLLQSFEVEGCCMVVNSLLNTL 181
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
++ ++ A+ ++D+ + TF +L++GLC G+ ++ LE+LG M C PD+
Sbjct: 182 VKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDI 241
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRV-EPDVMAYATIITGLSNGGRVEEGYVLFK 362
Y L++ L+ +++++K V PDV+ Y ++I+G G++ E L
Sbjct: 242 VTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
+M G + LV+ + ++ ++ ++S G D+ + +LI+G C +
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
+ + +L++ G+ P+ + L+ + N +LL+ E LG D+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILI------NALCNENRLLKARELLGQLASKDII- 414
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
P M YN ++D K G++ +A + +E+
Sbjct: 415 --------PQPFM------------------YNPVIDGFCKAGKVNEANVIVEEMEKKKC 448
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
KPD +++I I+ H G + +A +K++ + C P L L K G EA
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH 508
Query: 603 L 603
L
Sbjct: 509 L 509
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 43/406 (10%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE-EGY 358
R + Y +L R L G D +++E MK D V P+ +++ + G++
Sbjct: 100 RHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATA 159
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+L + + +G + + SL+ + V +++V L + + D +N LI GL
Sbjct: 160 LLLQSFEVEGCCM---VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID 478
C + K EKA +L V G EPD ++ Y L Q GF +
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVT-----------------YNTLIQ----GFCKSN 255
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDE 536
+L + A E+F +K S D+ Y ++ K G+M++A SL D+
Sbjct: 256 ELNK-------------ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 537 INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGE 596
+ + P + ++++ + + GE+ A E K+I C P + + L G C++G+
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
+ + L + + P F YS+ + C N K +L ++ + P + +
Sbjct: 363 VSQGFRLWEE-MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 657 AVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
VI G CK G + EA + + ++K + D I + +I H K
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEMEKKK--CKPDKITFTILIIGHCMK 465
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L +M G P + LI+ + + +++ +++ P V Y ++
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
+ G + A S+ DD G+ VTF VLV G +AG + E+ G+M C
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
PDV +T L+ G + R+WEEM + P+ Y+ +I L N R+ + L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
++ SK + +Y +++ F KV +++++ + D + LI G C
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
+ +A +F + G PD ++V LL +A + Y L Q K
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 225/513 (43%), Gaps = 49/513 (9%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ KG H+ + + C R A + G P F L+ R
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ ++M + G KP + N +++ L G + A+ + D E G VT+
Sbjct: 175 SEALELVDRMV-EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ +C++G+ +E+L +M E+ + D Y++++ L G+LD ++ EM+
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ D++ Y T+I G N GR ++G L ++M + + + L++SFV K+
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
LLK+++ G + YN+LI+G C N+ E+A ++ + I +G +PD ++ L+ Y
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 454 AEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
+A R IDD LE+F + +G ++ +
Sbjct: 414 CKANR------------------IDD----------------GLELFREMSLRGVIANTV 439
Query: 514 -YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
YN L+ + G+++ A LF E+ ++PD SY I + D GE+++A E KI
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM------YSLTVIH 626
+ I Y + G+C ++D+A L S P++ + Y++ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDL-------FCSLPLKGVKLDARAYNIMISE 552
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
C+ + K + +M ++G P + + +I
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/496 (20%), Positives = 220/496 (44%), Gaps = 11/496 (2%)
Query: 191 QGKP-PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
Q +P P+ F L + + V + ++M +K G+ ++ + +++ R L
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESK-GIAHSIYTLSIMINCFCRCRKL 139
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
A S + G + + V F L+ GLC R+ E LE++ RM E +P + L
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
V L G + + + + M + +P+ + Y ++ + G+ L ++M+ +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
+D Y +++ + F+L ++ G++AD+ YN LI G CN +++ K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFV 488
L + I+ + P+ ++ L+ + + ++ +LL++M + G P F
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 489 EKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
++ A+++ + KG + +NIL++ K + L LF E++ + ++
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
+Y+ + G+++ A + +++ P I +YK L GLC GE+++A+ +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL----EI 495
Query: 608 LGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
G + ME +Y + + C ++ + + + +G + +IS +C+
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 665 YGTIEEARKVFSNLRE 680
++ +A +F + E
Sbjct: 556 KDSLSKADILFRKMTE 571
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 196/463 (42%), Gaps = 38/463 (8%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P V +NR+ A+ +T +L L++ + G+ T +++ C+ ++
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+G++ + PD + L+ L + + L + + M + +P ++ T++ GL
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G+V + VL M G + YG ++ + +LL+ + + D
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
Y+ +I+GLC + A LF +G + D ++ L+ + A R ++ KLL+ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM- 324
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKA 530
+K K +V +++L+DS K G++++A
Sbjct: 325 --------------------------------IKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
L E+ + P++ +Y+ I +++A + + +I C P I + L G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 591 LCKIGEIDEAMMLVRD-CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
CK ID+ + L R+ L V + + Y+ V C+S E + EM+ +
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVT--YNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
P V ++ G+C G +E+A ++F + + K+ E D +Y
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM--ELDIGIY 511
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 138/307 (44%), Gaps = 1/307 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N +++ + R ADQL + M +G P+ + LI R +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+ M +K G P + +N +++ + +D L ++ + G+ VT+ LV+G CQ
Sbjct: 392 DLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
+G+++ ++ M + RPD+ +Y +L+ L G L+ L ++ +++K ++E D+
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y II G+ N +V++ + LF + KG +D Y ++ + + L + +
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G+ D YN LI + A +L + G D +VK ++ + + + +
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDK 630
Query: 461 NFYKLLQ 467
+F +L
Sbjct: 631 SFLDMLS 637
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 148/318 (46%), Gaps = 12/318 (3%)
Query: 109 NGYKW--GPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEK------QKGYHH 160
N +W G ++ ++ K R+++P++V V + + A++ Q+G
Sbjct: 310 NAGRWDDGAKLLRDMIK-RKISPNVVT--FSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N +YN+ + N A Q+ +LM S+G P F ILI + A R ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+M + GV YN ++ ++G L++A ++ + + + V++ +L+ GLC
Sbjct: 427 REMSLR-GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G +++ LE+ G++ + D+ Y +++ + +D ++ + V+ D A
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y +I+ L + + +LF++M +GH D Y L+ + + + +L++++
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 401 SSGYRADLGIYNNLIEGL 418
SSG+ AD+ +I L
Sbjct: 606 SSGFPADVSTVKMVINML 623
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 202/445 (45%), Gaps = 14/445 (3%)
Query: 111 YKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
++WGP L L R+ +VLK + + FF+W ++Q G+ H+ +Y
Sbjct: 312 FRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV 371
Query: 170 YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV 229
+ R A ++L + M G P+ + LI + A +V+ +M+ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGC 430
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
KP Y ++D + G LD+A+ +Y + GL + T+ V++ L +AG + +
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+ M ++ C P++ Y +++ + N L+++ +M+ EPD + Y+ ++ L
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
+ G +EE +F EM+ K + D +YG LV+ + V + + ++ +G R ++
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
N+L+ +NK +A++L Q + GL P + LL + + + Q M
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLM 670
Query: 470 EKLGFPVIDDLARFFSIFVEKKGP---IMALEVFSYL----KEKGYVSVDIYNILMDSLH 522
G P A F + + GP + ++L E + + ++D LH
Sbjct: 671 ASTGHP-----AHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLH 725
Query: 523 KVGEMKKALSLFDEINGANLKPDSF 547
K G+ ++A S+++ N+ PD+
Sbjct: 726 KSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D YT +V L ++ +EM +D +P+ + Y +I + E +F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
+M+ G DR Y +L++ + D+ + + + G D Y+ +I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
AHKLF + +G P+ ++ ++ L+A+A+ +N KL + M+ GF
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF------- 535
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGAN 541
E V+ Y+I+M+ L G +++A ++F E+ N
Sbjct: 536 -----------------------EPDKVT---YSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
PD Y + + G +++A + + ++ P++ L ++ +I EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 602 MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV-IGVLNEMMQQGCPPGNV 653
L+++ L G + + T++ +C ++ K+ +G ++M P ++
Sbjct: 630 ELLQNMLA---LGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G++ D Y ++ L +F +KL +++G +P+ ++ L+ Y A +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE- 417
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSL 521
A+ VF+ ++E G + Y L+D
Sbjct: 418 ---------------------------------AMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
K G + A+ ++ + L PD+F+YS+ I C G + A + ++++ C P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLN 641
Y + K A+ L RD + N P + YS+ + E+ V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 642 EMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
EM Q+ P V ++ K G +E+A + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 176/413 (42%), Gaps = 38/413 (9%)
Query: 141 NPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQF 200
N L FH E G H+ SYN C+ R + A + M G P
Sbjct: 84 NYDLVISLFHHMEVC-GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 142
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
LI R + KM + G +P V +YN I+D + G ++ A+ ++D +
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKME-EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME 201
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
DG+ + VT+ LV GLC +GR + ++ M + P+V +T ++ + V +G
Sbjct: 202 RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
++++EEM + V+PDV Y ++I GL GRV+E + M +KG L D Y +L+
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 381 ESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE 440
F +V G L +++ G D YN +I+G + + A ++F +
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSR 378
Query: 441 PDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
P+ + LL R+E L + M+
Sbjct: 379 PNIRTYSILLYGLCMNWRVEKALVLFENMQ------------------------------ 408
Query: 501 SYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
K + + + YNI++ + K+G ++ A LF ++ LKPD SY+ I
Sbjct: 409 ---KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 190/381 (49%), Gaps = 7/381 (1%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ ++ YN +++ L R +ALSV + G + + VT L+ G CQ R+ +
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDA 158
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
++++ +M E RPDV Y ++ G ++ + +++ M++D V D + Y +++ G
Sbjct: 159 IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L GR + L ++M + + + + ++++ FV K L +++ D
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ YN+LI GLC + ++A ++ + + +G PD ++ L+ + ++KR++ KL +
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 468 QMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKV 524
+M + G ++ D + +I + + P A E+FS + + ++ Y+IL+ L
Sbjct: 339 EMAQRG--LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP--NIRTYSILLYGLCMN 394
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
++KAL LF+ + + ++ D +Y+I I +G ++ A + + P + +Y
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 585 KCLTKGLCKIGEIDEAMMLVR 605
+ G C+ + D++ +L R
Sbjct: 455 TTMISGFCRKRQWDKSDLLYR 475
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 198/464 (42%), Gaps = 57/464 (12%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +++++ + ++ + DL +S++ + G+ + ++ +++ LC+ R L V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+G+M + F Y EPDV+ +++I G
Sbjct: 127 VGKMMK-------FGY----------------------------EPDVVTVSSLINGFCQ 151
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G RV + L +M+ G D IY ++++ + V +L + G RAD
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN+L+ GLC ++ A +L + + + P+ ++ ++ ++ + + KL ++M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIM------ALEVFSYLKEKGYV-SVDIYNILMDSLHK 523
+ V D+ + S+ G M A ++ + KG + V YN L++ K
Sbjct: 272 RR--CVDPDVFTYNSLI---NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
+ + LF E+ L D+ +Y+ I + G A E ++ M P+I
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR---MDSRPNIRT 383
Query: 584 YKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVL 640
Y L GLC +++A++L N+ +E Y++ + CK + E +
Sbjct: 384 YSILLYGLCMNWRVEKALVLFE----NMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
+ +G P V + +ISG C+ +++ ++ ++E LL
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 178/454 (39%), Gaps = 66/454 (14%)
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
++E +++ +M + P + ++ ++ + N D + ++ M+ + D+ +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
+I L R + +M G+ D SL+ F N+V DL+ + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY 463
+R D+ IYN +I+G C + A +LF ++G+ D ++ L+ + R +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 464 KLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHK 523
+L++ M V+ D+ +V + ++D K
Sbjct: 230 RLMRDM------VMRDIVP---------------------------NVITFTAVIDVFVK 256
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
G+ +A+ L++E+ + PD F+Y+ I G + +A + + ++ C+P +
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 584 YKCLTKGLCKIGEIDEAMMLVR-------------------------------DCLGNVT 612
Y L G CK +DE L R + +
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
S P YS+ + C + EK + + M + + VI GMCK G +E+A
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 673 KVFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
+F +L + L + D + Y + +K+ D
Sbjct: 437 DLFRSLSCKGL--KPDVVSYTTMISGFCRKRQWD 468
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/181 (17%), Positives = 84/181 (46%), Gaps = 4/181 (2%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
KG + +YN ++ +L M +G + +I+ + AGR
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDA 367
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
++ +M ++ P + Y+ ++ L ++ AL ++++ ++ ++ + T+ +++
Sbjct: 368 AQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
G+C+ G +++ ++ + K +PDV +YT ++ + D ++ +M++D +
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 336 P 336
P
Sbjct: 484 P 484
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 202/445 (45%), Gaps = 14/445 (3%)
Query: 111 YKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
++WGP L L R+ +VLK + + FF+W ++Q G+ H+ +Y
Sbjct: 312 FRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV 371
Query: 170 YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV 229
+ R A ++L + M G P+ + LI + A +V+ +M+ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGC 430
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
KP Y ++D + G LD+A+ +Y + GL + T+ V++ L +AG + +
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+ M ++ C P++ Y +++ + N L+++ +M+ EPD + Y+ ++ L
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
+ G +EE +F EM+ K + D +YG LV+ + V + + ++ +G R ++
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
N+L+ +NK +A++L Q + GL P + LL + + + Q M
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLM 670
Query: 470 EKLGFPVIDDLARFFSIFVEKKGP---IMALEVFSYL----KEKGYVSVDIYNILMDSLH 522
G P A F + + GP + ++L E + + ++D LH
Sbjct: 671 ASTGHP-----AHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLH 725
Query: 523 KVGEMKKALSLFDEINGANLKPDSF 547
K G+ ++A S+++ N+ PD+
Sbjct: 726 KSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D YT +V L ++ +EM +D +P+ + Y +I + E +F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
+M+ G DR Y +L++ + D+ + + + G D Y+ +I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
AHKLF + +G P+ ++ ++ L+A+A+ +N KL + M+ GF
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF------- 535
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGAN 541
E V+ Y+I+M+ L G +++A ++F E+ N
Sbjct: 536 -----------------------EPDKVT---YSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
PD Y + + G +++A + + ++ P++ L ++ +I EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 602 MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV-IGVLNEMMQQGCPPGNV 653
L+++ L G + + T++ +C ++ K+ +G ++M P ++
Sbjct: 630 ELLQNMLA---LGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G++ D Y ++ L +F +KL +++G +P+ ++ L+ Y A +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE- 417
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSL 521
A+ VF+ ++E G + Y L+D
Sbjct: 418 ---------------------------------AMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
K G + A+ ++ + L PD+F+YS+ I C G + A + ++++ C P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLN 641
Y + K A+ L RD + N P + YS+ + E+ V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 642 EMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
EM Q+ P V ++ K G +E+A + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 202/445 (45%), Gaps = 14/445 (3%)
Query: 111 YKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
++WGP L L R+ +VLK + + FF+W ++Q G+ H+ +Y
Sbjct: 312 FRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV 371
Query: 170 YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV 229
+ R A ++L + M G P+ + LI + A +V+ +M+ + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGC 430
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
KP Y ++D + G LD+A+ +Y + GL + T+ V++ L +AG + +
Sbjct: 431 KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+ M ++ C P++ Y +++ + N L+++ +M+ EPD + Y+ ++ L
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLG 550
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
+ G +EE +F EM+ K + D +YG LV+ + V + + ++ +G R ++
Sbjct: 551 HCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVP 610
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
N+L+ +NK +A++L Q + GL P + LL + + + Q M
Sbjct: 611 TCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLM 670
Query: 470 EKLGFPVIDDLARFFSIFVEKKGP---IMALEVFSYL----KEKGYVSVDIYNILMDSLH 522
G P A F + + GP + ++L E + + ++D LH
Sbjct: 671 ASTGHP-----AHMFLLKMPAAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLH 725
Query: 523 KVGEMKKALSLFDEINGANLKPDSF 547
K G+ ++A S+++ N+ PD+
Sbjct: 726 KSGQKEEAGSVWEVAAQKNVFPDAL 750
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 147/353 (41%), Gaps = 37/353 (10%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D YT +V L ++ +EM +D +P+ + Y +I + E +F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
+M+ G DR Y +L++ + D+ + + + G D Y+ +I L
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
AHKLF + +G P+ ++ ++ L+A+A+ +N KL + M+ GF
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF------- 535
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGAN 541
E V+ Y+I+M+ L G +++A ++F E+ N
Sbjct: 536 -----------------------EPDKVT---YSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
PD Y + + G +++A + + ++ P++ L ++ +I EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 602 MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV-IGVLNEMMQQGCPPGNV 653
L+++ L G + + T++ +C ++ K+ +G ++M P ++
Sbjct: 630 ELLQNMLA---LGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHM 679
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 36/274 (13%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G++ D Y ++ L +F +KL +++G +P+ ++ L+ Y A +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE- 417
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSL 521
A+ VF+ ++E G + Y L+D
Sbjct: 418 ---------------------------------AMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
K G + A+ ++ + L PD+F+YS+ I C G + A + ++++ C P++
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLN 641
Y + K A+ L RD + N P + YS+ + E+ V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRD-MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 642 EMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
EM Q+ P V ++ K G +E+A + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/558 (22%), Positives = 257/558 (46%), Gaps = 29/558 (5%)
Query: 137 KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNR-NNHHRAADQLPELMDSQGK-- 193
+++ NP + F+ A KQ+ + ++ +Y + ++R N+ + L EL+
Sbjct: 79 RLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGF 138
Query: 194 -------------PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
S F+++++++++ G HV++ M N +G P + N ++
Sbjct: 139 VVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGN-YGRIPSLLSCNSLL 197
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL-C 299
L+R G +AL VYD + + T ++V C++G +D+ + L
Sbjct: 198 SNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGL 257
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
+V Y L+ G+++G RV M + V +V+ Y ++I G G +EE
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+F+ +K K + D+ +YG L++ + ++ + +++ G R + I N+LI G C
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVID 478
+ +A ++F L+PD + L+ Y A ++ KL QM +K P +
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV- 436
Query: 479 DLARFFSIFVEKKGPIMA----LEVFSYLKEKGYVSVDIY-NILMDSLHKVGEMKKALSL 533
++I ++ I A L ++ + ++G + +I + L+++L K+G+ +A+ L
Sbjct: 437 ---MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
++ + L D+ + ++ I + ++ +A E + + C P++ Y+ L+ G K
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
+G + EA V++ + P MY+ + A K KV ++ E+ +G P
Sbjct: 554 VGNLKEAFA-VKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVA 612
Query: 654 VCSAVISGMCKYGTIEEA 671
A+I+G C G I++A
Sbjct: 613 TYGALITGWCNIGMIDKA 630
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 141/618 (22%), Positives = 256/618 (41%), Gaps = 50/618 (8%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
T S+V N + F E G N +YN+ ++ L
Sbjct: 227 TCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRL 286
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M +G + + LI+ + G HV+E ++ K V + +Y +MD RTG
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ-HMYGVLMDGYCRTG 345
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
+ A+ V+D+ E G+ L+ G C++G++ E ++ RM + +PD Y
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
LV G +D L++ ++M + V P VM Y ++ G S G + L+K M +
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G D +L+E+ + L +++++ G D N +I GLC + K +A
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG-FPVIDDLARFFSI 486
++ +P + + L Y + ++ + + + ME+ G FP I+ S
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 487 FVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI--NGANLK 543
+ + ++ L+ +G +V Y L+ +G + KA + E+ G L
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Query: 544 PDSFSYSIAILCHVDLGEIKQACECHNKIIEM-------------------SC------- 577
+ S L +D +I +AC KI++ +C
Sbjct: 646 VNICSKIANSLFRLD--KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIA 703
Query: 578 ------------IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
+P+ Y GLCK G++++A L D L + P E+ Y++ +I
Sbjct: 704 ESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI-LI 762
Query: 626 HACK-SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
H C + D K + +EM +G P V +A+I G+CK G ++ A+++ L ++ +
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI- 821
Query: 685 TESDTIVYDEFLIDHMKK 702
+ I Y+ LID + K
Sbjct: 822 -TPNAITYNT-LIDGLVK 837
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 230/543 (42%), Gaps = 81/543 (14%)
Query: 151 WAEKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
W+ K HH +YN YC R + A +L + M + P+ + IL++ +S
Sbjct: 395 WSLKPD--HH---TYNTLVDGYC--RAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
G V ++ KM K GV + +++AL + G + A+ ++++ GL +
Sbjct: 448 RIGAFHDVLSLW-KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
+T V++ GLC+ +++E E+L + C+P V Y L GNL V E
Sbjct: 507 ITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEY 566
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M++ + P + Y T+I+G + + L E++++G A YG+L+ + +
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ-EGLEPDFLSVK 447
+ + +++ G ++ I + + L L+K ++A L Q + + L P + S+K
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
L A A K+ + VE P +K
Sbjct: 687 EFL--EASATTCLKTQKIAES-------------------VENSTP-----------KKL 714
Query: 508 YVSVDI-YNILMDSLHKVGEMKKALSLF-DEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
V +I YN+ + L K G+++ A LF D ++ PD ++Y+I I G+I +A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
+++ IP+I Y L KGLCK+G +D A L
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRL---------------------- 812
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
L+++ Q+G P + + +I G+ K G + EA ++ + E+ L+
Sbjct: 813 --------------LHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Query: 686 ESD 688
SD
Sbjct: 859 GSD 861
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 109/254 (42%), Gaps = 23/254 (9%)
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL---GFPVIDDLARFFSIFVEKKG 492
Q+ PD+ + ++ + + A+ + L ++ L GF V +L R F
Sbjct: 97 QQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVF-------- 148
Query: 493 PIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
+ FS+ S ++++++ + G +K AL +FD + P S +
Sbjct: 149 -----KEFSF-------SPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
+ V GE A ++++I P + + C+ G +D+AM+ ++ ++
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
Y+ + D E + VL M ++G V +++I G CK G +EEA
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 673 KVFSNLRERKLLTE 686
VF L+E+KL+ +
Sbjct: 317 HVFELLKEKKLVAD 330
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/578 (23%), Positives = 254/578 (43%), Gaps = 28/578 (4%)
Query: 144 LSFKFFHW--AEKQKGYHHNFASYNAFAYCMNRNN-HHRAADQLPELMDSQGKPPSEKQF 200
+ K F W +EK+ + N + ++F + R + D L L + K E
Sbjct: 79 IGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALS 138
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
+L ++++G + +Y+ + + P V N ++ L+++ L A VYD+
Sbjct: 139 HVL-HAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMC 197
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
+ G + + +LVKG+C G+++ +++ K C P++ Y ++ G+++
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
V++E+K P + + T+I G G L E+K +G + +++
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 381 ESFVAVNKVGAGFDL-----LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
++ K G+ + + ++++ + D+ YN LI LC K E A
Sbjct: 318 DA-----KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPI 494
++GL P+ LS PL+ Y ++K + KLL QM + G P I V
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 495 MALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
A+ + L ++G VS D IYN+LM L K G A LF E+ N+ PD++ Y+
Sbjct: 433 DAVNMKVKLIDRG-VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATL 491
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I + G+ +A + + +E + + + KG C+ G +DEA+ C+ +
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA----CMNRMN 547
Query: 613 SG---PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
P +F YS + K D I + M + C P V +++I+G C G +
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 670 EARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADL 707
A + F ++ R L+ +V LI + K+++ L
Sbjct: 608 MAEETFKEMQLRDLVP---NVVTYTTLIRSLAKESSTL 642
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 182/479 (37%), Gaps = 82/479 (17%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI--- 284
G P + YN I+ + G ++ A V+ + K G TF ++ G C+ G
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 285 DEML--------------------------------EVLGRMREKLCRPDVFAYTVLVRI 312
D +L E +G + C+PDV Y +L+
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 313 LVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID 372
L +G + + +E K + P+ ++YA +I + L +M +G D
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 373 RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
YG L+ V + ++ L+ G D IYN L+ GLC +F A LF
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFS 474
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG 492
+ + PD Y A ++ F + D+ + FS+ VEK
Sbjct: 475 EMLDRNILPD---------AYVYATLIDGFIRSGD---------FDEARKVFSLSVEKG- 515
Query: 493 PIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
V VD+ +N ++ + G + +AL+ + +N +L PD F+YS
Sbjct: 516 ----------------VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 551 IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA-----MMLVR 605
I +V ++ A + + + C P++ Y L G C G+ A M +R
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619
Query: 606 DCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
D + NV + +L A +S+ EK + MM C P V + ++ G K
Sbjct: 620 DLVPNVVT-----YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/448 (19%), Positives = 181/448 (40%), Gaps = 45/448 (10%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ A+YN + + A + +G P+ + LI+ + + + Y +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKS----KEYDIA 399
Query: 221 EKMRNKF---GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
K+ + G KP + Y ++ L+ +GH+D A+++ + G+ + + +L+ G
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC+ GR + M ++ PD + Y L+ + G+ D +V+ + V+ D
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ + +I G G ++E M + + D+ Y ++++ +V + + +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL-VLYAEA 456
+ + + ++ Y +LI G C F+ A + F+ L P+ ++ L+ L E+
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 457 KRMEN---FYKLLQQMEKLGFPVIDDLARFFSIFVEK-KGPIMALEVFSYLKEKGYVSVD 512
+E +++L+ M P FV+K G ++A
Sbjct: 640 STLEKAVYYWELM--MTNKCVPNEVTFNCLLQGFVKKTSGKVLA---------------- 681
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS-----YSIAILCHVDLGEIKQACE 567
G SLF E +K D +S Y+ A++C G +K AC
Sbjct: 682 ---------EPDGSNHGQSSLFSEF-FHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACM 731
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
+K+++ P ++ + G C +G
Sbjct: 732 FQDKMVKKGFSPDPVSFAAILHGFCVVG 759
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 142/639 (22%), Positives = 257/639 (40%), Gaps = 124/639 (19%)
Query: 111 YKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
+KWGP L L+ +V LV +L++ + +FF WA K++ + H+ ++Y
Sbjct: 74 FKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLI 133
Query: 170 YCMN----------------RNNHHRAADQ-LPELMDSQGKP------------------ 194
C+ RN + + L EL+ + G+
Sbjct: 134 RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193
Query: 195 -PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLAL 253
P+ + +I M G+ +V+ VY +M N+ P Y+ ++ + + G D A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 254 SVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRIL 313
++D+ K++ + + L+ + G++++ L++ M+ C P V+ YT L++ L
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 314 VPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK----SKGH 369
G +D +++M +D + PDV+ ++ L GRVEE +F EM +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLK-DLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
+ + +L ES V++V + FD +K D VS Y+ LI+G C N+ EKA
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT----YSILIDGYCKTNRVEKAL 429
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV 488
L + ++G P + L+ +AKR E
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYE---------------------------- 461
Query: 489 EKKGPIMALEVFSYLKEK-GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
A E+F LKE G VS +Y +++ K G++ +A+ LF+E+ PD +
Sbjct: 462 ------AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
+Y+ + V G I +A K+ E C I ++ + G + G A+ +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE-- 573
Query: 608 LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGT 667
T+ H+ G P V + ++ G
Sbjct: 574 ---------------TIKHS-------------------GIKPDGVTYNTLLGCFAHAGM 599
Query: 668 IEEARKVFSNLRERKLLTESDTIVYDEFL-----IDHMK 701
EEA ++ ++++ E D I Y L +DH K
Sbjct: 600 FEEAARMMREMKDKGF--EYDAITYSSILDAVGNVDHEK 636
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 12/235 (5%)
Query: 169 AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFG 228
YC + N A L E MD +G PP + LI A R ++++++ FG
Sbjct: 418 GYC--KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 229 -VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
V RV Y ++ + G L A+ ++++ K G + + L+ G+ +AG I+E
Sbjct: 476 NVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+L +M E CR D+ ++ +++ G + ++E +K ++PD + Y T++
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
++ G EE + +EMK KG D Y S+++ AV V D KD VSS
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSILD---AVGNV----DHEKDDVSS 641
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 191/382 (50%), Gaps = 8/382 (2%)
Query: 227 FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDE 286
G++ ++ +N +++ + LALS+ + G + +RVT LV G C+ R+ +
Sbjct: 114 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD 173
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
+ ++ +M E +PD+ AY ++ L ++ ++E+++ + P+V+ Y ++
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 347 GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA 406
GL N R + L +M K + Y +L+++FV KV +L +++V
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
D+ Y++LI GLC ++ ++A+++F + + +G D +S L+ + +AKR+E+ KL
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 467 QQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSL 521
++M + G ++ + + ++ F + A E FS + G +S DI YNIL+ L
Sbjct: 354 REMSQRG--LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNILLGGL 410
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
GE++KAL +F+++ + D +Y+ I G++++A + P I
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 582 AAYKCLTKGLCKIGEIDEAMML 603
Y + GLC G + E L
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEAL 492
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 16/372 (4%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ G KP + YN I+D+L +T ++ A + + + G+ VT+ LV GLC + R
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ +L M +K P+V Y+ L+ V G + ++EEM + ++PD++ Y+++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL R++E +F M SKG L D Y +L+ F +V G L +++ G
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
++ YN LI+G +KA + F G+ PD + LL + +E +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 466 LQQMEKLGFPVIDDLARFFSIF--VEKKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSL 521
+ M+K + D+ + ++ + K G + A +F L KG + Y +M L
Sbjct: 423 FEDMQKREMDL--DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
G + + +L+ ++ L + C + G+I + E K++ PS+
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKND--------CTLSDGDITLSAELIKKMLSCGYAPSL 532
Query: 582 AAYKCLTKGLCK 593
K + G+CK
Sbjct: 533 --LKDIKSGVCK 542
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 202/465 (43%), Gaps = 44/465 (9%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +NR++ A+++ D+ +S+ + G+ + TF +++ C ++ L +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LG+M + Y EPD + +++ G
Sbjct: 143 LGKMLK-------LGY----------------------------EPDRVTIGSLVNGFCR 167
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
RV + L +M G+ D Y ++++S +V FD K++ G R ++
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
Y L+ GLCN +++ A +L I++ + P+ ++ LL + + ++ +L ++M
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 471 KLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS-VDIYNILMDSLHKVGEMK 528
++ P I + + A ++F + KG ++ V YN L++ K ++
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
+ LF E++ L ++ +Y+ I G++ +A E +++ P I Y L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 589 KGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNEMMQ 645
GLC GE+++A+++ D + M+ Y+ + CK+ E+ + +
Sbjct: 408 GGLCDNGELEKALVIFED----MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+G P V + ++SG+C G + E +++ +++ L+ T+
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 144/633 (22%), Positives = 256/633 (40%), Gaps = 76/633 (12%)
Query: 124 LRRVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYH-----HNFASYNAFAYCMNRNNH 177
L R+ P V EVL + + + TL +F Q G+H H S +A + + R+
Sbjct: 73 LIRLNPLAVVEVLYRCRNDLTLGQRFV----DQLGFHFPNFKHTSLSLSAMIHILVRSGR 128
Query: 178 ------------HRAADQLPELMDSQGKPPS-----EKQFEILIRMHSDAGRGLRVYHVY 220
R+ E+++S S + F++LIR + A + + +
Sbjct: 129 LSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF 188
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+R+K G + N ++ +L+R G ++LA VY + G+ T ++V LC+
Sbjct: 189 TLLRSK-GFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCK 247
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G+++++ L +++EK PD+ Y L+ +G ++ + M P V
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y T+I GL G+ E +F EM G D Y SL+ V + D+
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
S DL +++++ +KA F + GL PD + L+ Y +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDS 520
L +M + G A++V + YN ++
Sbjct: 428 VAMNLRNEMLQQG---------------------CAMDVVT------------YNTILHG 454
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L K + +A LF+E+ L PDS++ +I I H LG ++ A E K+ E
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
+ Y L G K+G+ID A + D + P YS+ V C + V
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL-PTPISYSILVNALCSKGHLAEAFRVW 573
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTES---DTIVYDEFLI 697
+EM+ + P ++C+++I G C+ G + K+++E D I Y+ +
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL-----EKMISEGFVPDCISYNTLIY 628
Query: 698 DHMKKKTADLVMSGLKFFGLESKLKSKGCKLLP 730
++++ K FGL K++ + L+P
Sbjct: 629 GFVREENMS------KAFGLVKKMEEEQGGLVP 655
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/537 (21%), Positives = 236/537 (43%), Gaps = 16/537 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ KG+ + + NA + R A + + + G + I++ G+
Sbjct: 192 RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKM 251
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+V +++ K GV P + YN ++ A G ++ A + + G T+
Sbjct: 252 EKVGTFLSQVQEK-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ GLC+ G+ + EV M PD Y L+ +G++ +V+ +M+
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
V PD++ ++++++ + G +++ + F +K G + D IY L++ + +
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+L +++ G D+ YN ++ GLC +A KLF + L PD ++ L+ +
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 454 AEAKRMENFYKLLQQME----KLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGY 508
+ ++N +L Q+M+ +L + L F K G I A E+++ + K
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG----KVGDIDTAKEIWADMVSKEI 546
Query: 509 VSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ I Y+IL+++L G + +A ++DE+ N+KP + I + G
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGES 606
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG--PMEFMYSLTVI 625
K+I +P +Y L G + + +A LV+ + G P F Y+ +++
Sbjct: 607 FLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK-MEEEQGGLVPDVFTYN-SIL 664
Query: 626 HA-CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
H C+ N ++ VL +M+++G P + +I+G + EA ++ + +R
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 186/459 (40%), Gaps = 67/459 (14%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
KG+ +YN + ++ + A ++ M G P + L+ G +
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVE 358
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL- 274
V+ MR++ V P + ++ +M R+G+LD AL ++ KE GL + V + +L
Sbjct: 359 TEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 275 ----------------------------------VKGLCQAGRIDEMLEVLGRMREKLCR 300
+ GLC+ + E ++ M E+
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
PD + T+L+ GNL + ++++MK+ R+ DV+ Y T++ G G ++ +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
+ +M SK L Y LV + + + F + +++S + + I N++I+G C
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL 480
+ I EG PD +S L+ + + M + L+++ME
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME---------- 647
Query: 481 ARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGA 540
E++G ++ +VF+ YN ++ + +MK+A + ++
Sbjct: 648 --------EEQGGLVP-DVFT------------YNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ PD +Y+ I V + +A H+++++ P
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 3/290 (1%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
Q+G + +YN + + + AD+L M + P ILI H G
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+++KM+ K ++ V YN ++D + G +D A ++ D + +++ +L
Sbjct: 498 NAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
V LC G + E V M K +P V +++ GN E+M +
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK--GHLIDRAIYGSLVESFVAVNKVGAG 392
PD ++Y T+I G + + + L K+M+ + G + D Y S++ F N++
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+L+ ++ G D Y +I G + + +A ++ +Q G PD
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 218/487 (44%), Gaps = 45/487 (9%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFHWAEK-QKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
+R+ P + ++ Q N L+ + F +A K G+ HN+ +Y++ + ++R RA D
Sbjct: 45 QRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSR---ARAFDP 101
Query: 184 LPELMDS--QGKPP---SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNR 238
+ LM PP E F L+R + AGR ++ ++ + FGVK V N
Sbjct: 102 VESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPD-FGVKRSVRSLNT 160
Query: 239 IMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+++ LI+ DL +++ + KE G+ T +LVK LC+ I+ +VL +
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM 220
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
P++ YT ++ V +G+++ RV EEM PD Y ++ G GR E
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+ +M+ + YG ++ + K G ++ +++ + D + +I+
Sbjct: 281 ATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
LC +K ++A L++ ++ PD + L+ + R+ KL + EK P
Sbjct: 341 LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-- 398
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEI 537
S+ YN L+ + + GE+ +A L+D++
Sbjct: 399 --------------------------------SLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
KP++F+Y++ I G +K+ +++E+ C P+ + L +GL K+G+
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486
Query: 598 DEAMMLV 604
++AM +V
Sbjct: 487 EDAMKIV 493
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 172/407 (42%), Gaps = 36/407 (8%)
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
F+ L++ AGR + + + R+ + + V + L+ +L+ D +++ K
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 331 KD-RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+ + P++ ++ L +E Y + E+ S G + + Y +++ +VA +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
+ +L++++ G+ D Y L++G C L +F +A + + +EP+ ++ +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
+ + K+ + +M L R S++ +
Sbjct: 303 IRALCKEKKSGEARNMFDEM----------LER------------------SFMPDSSLC 334
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
I + D HKV E A L+ ++ N PD+ S I G + +A +
Sbjct: 335 CKVIDALCED--HKVDE---ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
++ E IPS+ Y L G+C+ GE+ EA L D + P F Y++ + K
Sbjct: 390 DEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD-MYERKCKPNAFTYNVLIEGLSK 447
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
+ + ++ + VL EM++ GC P + G+ K G E+A K+ S
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVS 494
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 172/383 (44%), Gaps = 13/383 (3%)
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDR--VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
LV ++ Q N+D L+++ K + Y +I+ LS + L ++++
Sbjct: 52 LVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRN 111
Query: 367 KGHLID--RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
I ++ L+ ++ + + + + G + + N L+ L +F
Sbjct: 112 SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 425 EKAHKLFQVTIQE-GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
+ H +F+ + + G+ P+ + L+ + +E+ YK+L ++ +G ++ +L +
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMG--LVPNLVTY 229
Query: 484 FSI---FVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEING 539
+I +V + A V + ++G Y Y +LMD K+G +A ++ D++
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 289
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE 599
++P+ +Y + I + +A ++++E S +P + + LC+ ++DE
Sbjct: 290 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 600 AMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
A L R L N P + S + CK + + +E ++G P + + +I
Sbjct: 350 ACGLWRKMLKN-NCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLI 407
Query: 660 SGMCKYGTIEEARKVFSNLRERK 682
+GMC+ G + EA +++ ++ ERK
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERK 430
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 134/325 (41%), Gaps = 37/325 (11%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
F +++ G N + N + + N +A ++ + + S G P+ + ++ +
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
G V E+M ++ G P Y +MD + G A +V DD +++ ++
Sbjct: 238 ARGDMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNE 296
Query: 269 VTFMVLVKGLCQAGR-------IDEMLE----------------------------VLGR 293
VT+ V+++ LC+ + DEMLE + +
Sbjct: 297 VTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRK 356
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
M + C PD + L+ L +G + ++++E +K + P ++ Y T+I G+ G
Sbjct: 357 MLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGE 415
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
+ E L+ +M + + Y L+E V G +L++++ G + +
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEG 438
L EGL L K E A K+ + + G
Sbjct: 476 LFEGLQKLGKEEDAMKIVSMAVMNG 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 41/256 (16%)
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFP-VIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
LL Y A R E+ ++ ++ G + L ++ ++ + + +F KE
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 508 YVSVDIY--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
++ +I+ N+L+ +L K +++ A + DEI L P+ +Y+ + +V G+++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
++++ P Y L G CK+G EA
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT----------------------- 282
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
V+++M + P V +I +CK EAR +F + ER +
Sbjct: 283 -------------VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 686 ESDTI--VYDEFLIDH 699
+S V D DH
Sbjct: 330 DSSLCCKVIDALCEDH 345
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 222/504 (44%), Gaps = 46/504 (9%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G +P + + +++ + A+++ D E G + +TF L+ GL +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E + ++ RM ++ C+P++ Y V+V L +G++D + +M+ ++E DV+ + TII
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
L V++ LFKEM++KG + Y SL+ + + LL D++
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+L +N LI+ KF +A KL I+ ++PD + L+ + R++ ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 466 LQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHK 523
+ M K FP +D F + K E+F + +G V + Y L+ L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
G+ A +F ++ + PD +YSI + + G++++A E + + + I
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 584 YKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
Y + +G+CK G++D+ + SL++
Sbjct: 433 YTTMIEGMCKAGKVDDG---------------WDLFCSLSL------------------- 458
Query: 644 MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM--- 700
+G P V + +ISG+C ++EA + ++E L +S T Y+ + H+
Sbjct: 459 --KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT--YNTLIRAHLRDG 514
Query: 701 -KKKTADLV--MSGLKFFGLESKL 721
K +A+L+ M +F G S +
Sbjct: 515 DKAASAELIREMRSCRFVGDASTI 538
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 204/454 (44%), Gaps = 9/454 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G HN +YN C R + A L M G PS L+ + R
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ ++M + G +P + ++ L A+++ D + G VT+ V+V
Sbjct: 100 VALVDQMV-EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GLC+ G ID +L +M DV + ++ L ++D L +++EM+ + P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+V+ Y+++I+ L + GR + L +M K + + +L+++FV K L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
D++ D+ YN+LI G C ++ +KA ++F+ + + PD + L+ + ++
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYVSVDI 513
KR+E+ +L ++M G ++ D + ++ A +VF + G V DI
Sbjct: 339 KRVEDGTELFREMSHRG--LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG-VPPDI 395
Query: 514 --YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
Y+IL+D L G+++KAL +FD + + +K D + Y+ I G++ +
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
+ P++ Y + GLC + EA L++
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 203/456 (44%), Gaps = 42/456 (9%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ GY + ++ + + +N A L + M +G P+ + +++ G
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+++ KM ++ V ++N I+D+L + H+D AL+++ + + G+ VT+ L
Sbjct: 168 LAFNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ LC GR + ++L M EK P++ + L+ V +G ++ ++M K +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD+ Y ++I G R+++ +F+ M SK D Y +L++ F +V G +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L +++ G D Y LI+GL + + A K+F+ + +G+ PD ++ LL
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-- 512
++E ALEVF Y+ +K + +D
Sbjct: 407 NNGKLEK----------------------------------ALEVFDYM-QKSEIKLDIY 431
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHN 570
IY +++ + K G++ LF ++ +KP+ +Y+ I LC L +++A
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL--LQEAYALLK 489
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
K+ E +P Y L + + G+ + L+R+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 158/370 (42%), Gaps = 5/370 (1%)
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M K R P + + +++ ++ + + L ++M+ G + Y L+ F ++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ LL ++ GY + ++L+ G C+ + A L ++ G PD ++
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 449 LL-VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK-EK 506
L+ L+ K E + + +++ P + + ++ +A + + ++ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 507 GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
V I+N ++DSL K + AL+LF E+ ++P+ +YS I C G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH 626
+ + +IE P++ + L K G+ EA L D + + P F Y+ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLING 299
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
C + +K + M+ + C P + +I G CK +E+ ++F + R L+
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-- 357
Query: 687 SDTIVYDEFL 696
DT+ Y +
Sbjct: 358 GDTVTYTTLI 367
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
+N L+ ++ K+ + +SL +++ + + ++Y+I I C +I A K++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC-KSND 632
++ PSI L G C I +A+ LV D + + P ++ T+IH N
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFT-TLIHGLFLHNK 130
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
A + + +++ M+Q+GC P V V++G+CK G I+ A + + + K+ E+D +++
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI--EADVVIF 188
Query: 693 DEFLIDHMKK 702
+ +ID + K
Sbjct: 189 NT-IIDSLCK 197
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ +YN ++ +L M +G + LI+ G V+
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
++M + GV P + Y+ ++D L G L+ AL V+D ++ + + + +++G+C+
Sbjct: 384 KQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
AG++D+ ++ + K +P+V Y ++ L + L + ++MK+D PD
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
Y T+I G L +EM+S + D + G
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 539
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+G + +Y + + A ++ + M S G PP + IL+ + G+
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ V++ M+ K +K +++Y +++ + + G +D ++ G+ VT+ +
Sbjct: 413 KALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ GLC + E +L +M+E PD Y L+R + G+ + EM+ R
Sbjct: 472 ISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 531
Query: 335 EPDVMAYATIITGLSNGGRVEEGYV 359
D ++ + + GR+++ ++
Sbjct: 532 VGDASTIG-LVANMLHDGRLDKSFL 555
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 199/471 (42%), Gaps = 74/471 (15%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFH--WAEKQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
+ +TPS V ++++ + + S F AE GY H+ +S+ + N +AA+
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE 71
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGR------GLRVYH------------------ 218
L M + SE +IL+ + GR LRV+H
Sbjct: 72 DLIVRMKIENCVVSE---DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVL 128
Query: 219 --------------VYEKMRNKFGVKPRVFLYNRIMDALIRT-GHLDLALSVYDDFKEDG 263
Y+ MR + G+ P V N ++ AL R G +D L ++ + + G
Sbjct: 129 AILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRG 187
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
D + T+ L+ GLC+ GRIDE ++ M EK C P V YT L+ L N+D +
Sbjct: 188 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAM 247
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
R EEMK +EP+V Y++++ GL GR + LF+ M ++G + Y +L+
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
K+ +LL + G + D G+Y +I G C ++KF +A I G+ P+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNR 367
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL 503
L+ + K V+ L + P A ++ +
Sbjct: 368 LTWNIHV--------------------KTSNEVVRGLCANY--------PSRAFTLYLSM 399
Query: 504 KEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+ +G V V+ L+ L K GE +KA+ L DEI P ++ + I
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 10/299 (3%)
Query: 386 VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
V K A FD ++GY D + ++ L + NKF+ A L ++ +E +S
Sbjct: 29 VEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI---VRMKIENCVVS 85
Query: 446 VKPLLVL---YAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFS 501
LL + Y R + ++ +M+ P +I VE+ +A + +
Sbjct: 86 EDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYK 145
Query: 502 YLKEKGYV-SVDIYNILMDSLHKV-GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
++E G +V N+L+ +L + G + L +F E+ PDS++Y I
Sbjct: 146 NMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRF 205
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
G I +A + +++E C P++ Y L GLC +DEAM + + + + P F
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE-MKSKGIEPNVFT 264
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
YS + CK + + + + MM +GC P V + +I+G+CK I+EA ++ +
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 50/364 (13%)
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQ-------------- 316
+ + +G + R + L V +M++ C P AY ++ ILV +
Sbjct: 89 LLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 317 ----------------------GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
G +D L+++ EM K +PD Y T+I+GL GR+
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
+E LF EM K Y SL+ V L+++ S G ++ Y++L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
++GLC + +A +LF++ + G P+ ++ L+ + ++++ +LL +M G
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 475 -PVIDDLARFFSIFVEKKGPIMALEVFSYLKEK--GYVSVD--IYNILMDSLHKV----- 524
P + S F E ++L E G ++ + +NI + + ++V
Sbjct: 329 KPDAGLYGKVISGFCAISK---FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC 385
Query: 525 -GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
+A +L+ + + + + + C GE ++A + ++I+ CIPS
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 584 YKCL 587
+K L
Sbjct: 446 WKLL 449
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 185/465 (39%), Gaps = 51/465 (10%)
Query: 252 ALSVYDDFKED---GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
+++V+D + G ++ +F +V L A + +++ RM+ + C V + +
Sbjct: 32 SMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENC---VVSEDI 88
Query: 309 LVRILVPQGNLD---GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
L+ I G + LRV+ +MK +P AY T++ L ++ + +K M+
Sbjct: 89 LLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 366 SKGHLIDRAIYGSLVESFVAVN-KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
G A L+++ + V AG + ++ G D Y LI GLC +
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
++A KLF +++ P ++ L+ +K ++ + L++M+ G
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG----------- 257
Query: 485 SIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP 544
+ VF+Y + LMD L K G +A+ LF+ + +P
Sbjct: 258 ----------IEPNVFTY------------SSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 545 DSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+ +Y+ I +I++A E +++ P Y + G C I + EA +
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
Query: 605 RD-CLGNVTSGPMEF----MYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
+ LG +T + + S V+ +N + + M +G +++
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLV 415
Query: 660 SGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKT 704
+CK G ++A ++ + + T + LI H KT
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW---KLLIGHTLDKT 457
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/504 (22%), Positives = 221/504 (43%), Gaps = 46/504 (9%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G +P + + +++ + A+++ D E G + +TF L+ GL +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E + ++ RM ++ C+P++ Y V+V L +G+ D L + +M+ ++E DV+ + TII
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
L V++ LFKEM++KG + Y SL+ + + LL D++
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+L +N LI+ KF +A KL+ I+ ++PD + L+ + R++ ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 466 LQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHK 523
+ M K FP + F + K E+F + +G V + Y L+ L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
G+ A +F ++ + PD +YSI + + G++++A E + + + I
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 584 YKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
Y + +G+CK G++D+ + SL++
Sbjct: 508 YTTMIEGMCKAGKVDDG---------------WDLFCSLSL------------------- 533
Query: 644 MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM--- 700
+G P V + +ISG+C ++EA + ++E L S T Y+ + H+
Sbjct: 534 --KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT--YNTLIRAHLRDG 589
Query: 701 -KKKTADLV--MSGLKFFGLESKL 721
K +A+L+ M +F G S +
Sbjct: 590 DKAASAELIREMRSCRFVGDASTI 613
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 204/456 (44%), Gaps = 42/456 (9%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ GY + ++ + + +N A L + M +G P+ + +++ G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
++ KM ++ V ++N I+D+L + H+D AL+++ + + G+ VT+ L
Sbjct: 243 LALNLLNKMEAA-KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ LC GR + ++L M EK P++ + L+ V +G +++++M K +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD+ Y +++ G R+++ +F+ M SK D Y +L++ F +V G +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L +++ G D Y LI+GL + + A K+F+ + +G+ PD ++ LL
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-- 512
++E ALEVF Y+ +K + +D
Sbjct: 482 NNGKLEK----------------------------------ALEVFDYM-QKSEIKLDIY 506
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHN 570
IY +++ + K G++ LF ++ +KP+ +Y+ I LC L +++A
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL--LQEAYALLK 564
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
K+ E +P+ Y L + + G+ + L+R+
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ KG N +Y++ C+ A QL M + P+ F LI G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +Y+ M K + P +F YN +++ LD A +++ + VT+
Sbjct: 347 VEAEKLYDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+KG C++ R+++ E+ M + D YT L++ L G+ D +V+++M D
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
V PD+M Y+ ++ GL N G++E+ +F M+ +D IY +++E KV G+
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
DL L G + ++ YN +I GLC+ ++A+ L + ++G P+
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 162/414 (39%), Gaps = 36/414 (8%)
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
++D+ + + G M + P + + L+ + D + + E+M++ + + Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+I ++ L +M G+ SL+ + ++ L+ +V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
GYR D + LI GL NK +A L +Q G +P+ ++ ++ + +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
LL +ME K V I+N ++DSL
Sbjct: 245 LNLLNKME---------------------------------AAKIEADVVIFNTIIDSLC 271
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K + AL+LF E+ ++P+ +YS I C G A + + +IE P++
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
+ L K G+ EA L D + + P F Y+ V C + +K +
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
M+ + C P V + +I G CK +E+ ++F + R L+ DT+ Y +
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV--GDTVTYTTLI 442
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ +YN ++ +L M +G + LI+ G V+
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
++M + GV P + Y+ ++D L G L+ AL V+D ++ + + + +++G+C+
Sbjct: 459 KQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
AG++D+ ++ + K +P+V Y ++ L + L + ++MK+D P+
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
Y T+I G L +EM+S + D + G
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 614
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+G + +Y + + A ++ + M S G PP + IL+ + G+
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ V++ M+ K +K +++Y +++ + + G +D ++ G+ VT+ +
Sbjct: 488 KALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ GLC + E +L +M+E P+ Y L+R + G+ + EM+ R
Sbjct: 547 ISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Query: 335 EPDVMAYATIITGLSNGGRVEEGYV 359
D ++ + + GR+++ ++
Sbjct: 607 VGDASTIG-LVANMLHDGRLDKSFL 630
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/490 (21%), Positives = 223/490 (45%), Gaps = 12/490 (2%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS +F ++++ + G R +E+MR + G+ P +Y ++ A +D ALS
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGR---IDEMLEVLGRMREKLCRPDVFAYTVLVR 311
KE+G++ VT+ V+V G +AG D + R+ + L + Y ++
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTL---NASIYGKIIY 422
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
N++ + EM+++ ++ + Y T++ G + ++G V+FK +K G
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
YG L+ + V K+ ++ + + G + +L Y+ +I G L + A +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEK 490
+ ++EG++PD + ++ + M+ + +++M+KL P + +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 491 KGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
+LEVF ++ G V +V +N L++ L + +M+KA+ + DE+ A + + +Y
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG 609
+ + + +G+ +A E ++ I Y+ L K CK G + A+ + ++
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 610 -NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTI 668
N+ F+Y++ + + D + ++ +M ++G P ++ IS K G +
Sbjct: 723 RNIPRN--SFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Query: 669 EEARKVFSNL 678
A + +
Sbjct: 781 NRATQTIEEM 790
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/520 (22%), Positives = 217/520 (41%), Gaps = 33/520 (6%)
Query: 150 HWAEKQKGYHH--NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI--- 204
+W ++ K H N + Y Y + + A+ L M+ +G + ++
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
M +D +GL V+ K + G P V Y +++ + G + AL V KE+G+
Sbjct: 460 TMVADEKKGLVVF----KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV 515
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
T+ +++ G + V M ++ +PDV Y ++ GN+D ++
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQ 575
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
+EM+K R P + II G + G + +F M+ G + + L+ V
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
++ ++L ++ +G A+ Y +++G ++ KA + F EGL+ D
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIF 695
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFP--------VIDDLARFFSIFVEKKGPIMA 496
+ + LL ++ RM++ + ++M P +ID AR ++ A
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW-------EA 748
Query: 497 LEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
++ +K++G V DI Y + + K G+M +A +E+ +KP+ +Y+ I
Sbjct: 749 ADLIQQMKKEG-VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 555 CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM---LVRDCLGNV 611
++A C+ ++ M P A Y CL L I EA + ++ C V
Sbjct: 808 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMV 867
Query: 612 TSGPMEFMYSLTVIHACKS-NDAEKVIGVLNEMMQQGCPP 650
+G + M T +H K E G L E +Q+ PP
Sbjct: 868 EAGLIVDMG--TAVHWSKCLCKIEASGGELTETLQKTFPP 905
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 196/449 (43%), Gaps = 13/449 (2%)
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
R F ++VK + G + E RMR + P YT L+ ++D L
Sbjct: 309 RTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
+MK++ +E ++ Y+ I+ G S G E F E K ++ +IYG ++ +
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
+ L++++ G A + IY+ +++G + +K +F+ + G P ++
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFP-VIDDLARFFSIFVEKKGPIMALEVFS-YLKE 505
L+ LY + ++ ++ + M++ G + + + FV+ K A VF +KE
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 506 KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
V +YN ++ + +G M +A+ E+ +P + ++ I + G+++++
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD-CLGNVTSGPMEFMYSLTV 624
E + + C+P++ + L GL + ++++A+ ++ + L V++ E Y+ +
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN--EHTYTKIM 666
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
D K + +G A++ CK G ++ A V + R +
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI- 725
Query: 685 TESDTIVYDEFLIDHMKKK-----TADLV 708
++ VY+ LID ++ ADL+
Sbjct: 726 -PRNSFVYN-ILIDGWARRGDVWEAADLI 752
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 212/461 (45%), Gaps = 42/461 (9%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR-- 283
K G +P ++ +++ L G + AL + D E G + +T LV GLC +G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 284 -----IDEM----------------------------LEVLGRMREKLCRPDVFAYTVLV 310
ID+M +E+L +M E+ + D Y++++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
L G+LD ++ EM+ + +++ Y +I G N GR ++G L ++M +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ + L++SFV K+ +L K+++ G D Y +LI+G C N +KA+++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQM 390
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---F 487
+ + +G +P+ + L+ Y +A R+++ +L ++M G V+ D + ++ F
Sbjct: 391 VDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG--VVADTVTYNTLIQGF 448
Query: 488 VEKKGPIMALEVFS-YLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
E +A E+F + K ++ Y IL+D L GE +KAL +F++I + ++ D
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
Y+I I + ++ A + + P + Y + GLCK G + EA +L R
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG 647
+ P + Y++ + DA K + ++ E+ + G
Sbjct: 569 -MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 204/458 (44%), Gaps = 9/458 (1%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ ++ + +++ R L LA S + G + +TF L+ GLC GR+ E
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
LE++ RM E +PD+ LV L G + + ++M + +P+ + Y ++
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
+ G+ L ++M+ + +D Y +++ + F+L ++ G +
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ YN LI G CN +++ KL + I+ + P+ ++ L+ + + ++ +L +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357
Query: 468 QMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVG 525
+M G P F ++ A ++ + KG ++ +NIL++ K
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+ L LF +++ + D+ +Y+ I +LG++ A E +++ P+I YK
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYK 477
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNE 642
L GLC GE ++A+ + + ME +Y++ + C ++ + +
Sbjct: 478 ILLDGLCDNGESEKALEIFE----KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ +G PG + +I G+CK G + EA +F + E
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 191/416 (45%), Gaps = 9/416 (2%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G+ + + N + + A L + M G P+ + ++ + +G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ KM + +K Y+ I+D L + G LD A +++++ + G+ +T+ +L
Sbjct: 246 LAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C AGR D+ ++L M ++ P+V ++VL+ V +G L + +EM +
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
PD + Y ++I G +++ + M SKG + + L+ + N++ G +
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L + + G AD YN LI+G C L K A +LFQ + + P+ ++ K LL
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLC 484
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM----ALEVFSYLKEKGYV- 509
+ E ++ +++EK + D+ ++I + A ++F L KG
Sbjct: 485 DNGESEKALEIFEKIEKSKMEL--DIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
V YNI++ L K G + +A LF ++ PD ++Y+I I H+ G+ ++
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 197/464 (42%), Gaps = 38/464 (8%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P V ++R+ A+ +T DL L++ + G+ T +++ C+ ++
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+G++ + P+ ++ L+ L +G + L + + M + +PD++ T++ GL
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G+ E +L +M G + YG ++ + +LL+ + + D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
Y+ +I+GLC + A LF +G+ + ++ L+ + A R ++ KLL+ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM- 324
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKA 530
+K K +V +++L+DS K G++++A
Sbjct: 325 --------------------------------IKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
L E+ + PD+ +Y+ I + +A + + ++ C P+I + L G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 591 LCKIGEIDEAMMLVRD-CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
CK ID+ + L R L V + + Y+ + C+ + EM+ + P
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVT--YNTLIQGFCELGKLNVAKELFQEMVSRKVP 470
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYD 693
P V ++ G+C G E+A ++F + + K+ E D +Y+
Sbjct: 471 PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM--ELDIGIYN 512
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 173/380 (45%), Gaps = 7/380 (1%)
Query: 320 DGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSL 379
D + ++ +M R P V+ ++ + + ++ + + L K+M+ KG + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 380 VESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
+ F K+ F + ++ GY + ++ LI GLC + +A +L ++ G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 440 EPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALE 498
+PD +++ L+ + + L+ +M + G P ++ + +A+E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 499 VFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCH 556
+ ++E+ + +D Y+I++D L K G + A +LF+E+ + + +Y+I I
Sbjct: 250 LLRKMEERN-IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
+ G + +I+ P++ + L K G++ EA L ++ + + P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PD 367
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
Y+ + CK N +K +++ M+ +GC P + +I+G CK I++ ++F
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 677 NLRERKLLTESDTIVYDEFL 696
+ R ++ +DT+ Y+ +
Sbjct: 428 KMSLRGVV--ADTVTYNTLI 445
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/601 (22%), Positives = 269/601 (44%), Gaps = 72/601 (11%)
Query: 130 SLVAEVLKVQTNPTLSFKFFH---WAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPE 186
SLV +LK NP L+++ F + ++ + + + A + R H +L
Sbjct: 4 SLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHN 63
Query: 187 LMDSQGKPPSE-KQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV-KPRVFLYNRIMDALI 244
L+ S ++ ++ + + + + + ++ +R++F KP V+LYN ++++ I
Sbjct: 64 LILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCI 123
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
+ ++ +Y D G+ + TF +L++ LC + +D E+ M EK C+P+ F
Sbjct: 124 KERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEF 183
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+ +LVR G D L + M+ V P+ + Y TI++ GR ++ + ++M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY----RADLGIYNNLIEGLCN 420
+ +G + D + S + + KV + D+ Y R + YN +++G C
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL 480
+ E A LF+ +I+E D S ++++ LQ + + G
Sbjct: 304 VGLLEDAKTLFE-SIRE--NDDLAS-------------LQSYNIWLQGLVRHG------- 340
Query: 481 ARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEING 539
F+E A V + +KG S+ YNILMD L K+G + A ++ +
Sbjct: 341 -----KFIE------AETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC--LTKGLCKIGEI 597
+ PD+ +Y + + +G++ A +++ +C+P+ AY C L L K+G I
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN--AYTCNILLHSLWKMGRI 447
Query: 598 DEAMMLVRDC------LGNVT--------SGPMEFMYSLTVI-------HACKSNDAEKV 636
EA L+R L VT G E ++ ++ A N
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 637 IGVLNE-MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEF 695
IG++++ +++ C P + S +++G+CK G EA+ +F+ + KL + D++ Y+ F
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL--QPDSVAYNIF 565
Query: 696 L 696
+
Sbjct: 566 I 566
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 223/528 (42%), Gaps = 37/528 (7%)
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAG---RGLRVYHVYEKMRNKFGVKPRVFLY 236
AA +L + M +G P+E F IL+R + AG +GL + + E FGV P +Y
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES----FGVLPNKVIY 220
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N I+ + R G D + + + +E+GL + VTF + LC+ G++ + + M
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 297 K----LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
L RP+ Y ++++ G L+ ++E ++++ + +Y + GL G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+ E + K+M KG Y L++ + + ++ + +G D Y
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
L+ G C++ K + A L Q ++ P+ + LL + R+ +LL++M +
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 473 GFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVD------------------- 512
G+ + + G + A+E+ ++ G ++
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 513 -----IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
Y+ L++ L K G +A +LF E+ G L+PDS +Y+I I G+I A
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
+ + C S+ Y L GL +I E L+ D + P Y+ + +
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM-DEMKEKGISPNICTYNTAIQYL 639
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
C+ E +L+EMMQ+ P +I CK + A++VF
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 217/490 (44%), Gaps = 23/490 (4%)
Query: 196 SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSV 255
S + + I ++ G+ + V ++M +K G+ P ++ YN +MD L + G L A ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 256 YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVP 315
K +G+ + VT+ L+ G C G++D +L M C P+ + +L+ L
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 316 QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI 375
G + + +M + D + I+ GL G +++ + K M+ G A
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS----AA 499
Query: 376 YGSLVESFVAVNKVGAGFDLLKD-LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
G+L S++ L+ D L+ + DL Y+ L+ GLC +F +A LF
Sbjct: 500 LGNLGNSYIG---------LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI 494
+ E L+PD ++ + + + ++ + +++L+ MEK G + + + K I
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 495 MALE-VFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
+ + +KEKG +S +I YN + L + +++ A +L DE+ N+ P+ FS+
Sbjct: 611 FEIHGLMDEMKEKG-ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG-N 610
I + + A E + + C Y + L G++ +A L+ L
Sbjct: 670 LIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRG 728
Query: 611 VTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEE 670
G F+Y V CK ++ E G+L++M+ +G VI G+ K G +E
Sbjct: 729 FELGT--FLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 671 ARKVFSNLRE 680
A + E
Sbjct: 787 ANSFADKMME 796
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 157/388 (40%), Gaps = 37/388 (9%)
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRI 239
AA L + M P+ IL+ GR + KM K G N I
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK-GYGLDTVTCNII 472
Query: 240 MDALIRTGHLDLALSV------------------YDDFKEDGLDEER-----VTFMVLVK 276
+D L +G LD A+ + Y +D L E +T+ L+
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GLC+AGR E + M + +PD AY + + QG + RV ++M+K
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+ Y ++I GL ++ E + L EMK KG + Y + ++ KV +LL
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI-----QEGLEPDFLSVKPLLV 451
+++ ++ + LIE C + F+ A ++F+ + +EGL L LL
Sbjct: 653 DEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYS--LMFNELLA 710
Query: 452 LYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSV 511
K E +L + +LG + DL +K +A + + ++GY
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVES---LCKKDELEVASGILHKMIDRGY-GF 766
Query: 512 DIYNIL--MDSLHKVGEMKKALSLFDEI 537
D ++ +D L K+G K+A S D++
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 224/500 (44%), Gaps = 13/500 (2%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS +F L+ + + V + E+M+ G+ ++ Y+ ++ R L LAL+
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQT-LGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
V + G + + VT L+ G C + RI + + ++ +M E +PD F +T L+ L
Sbjct: 140 VLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+ + ++M + +PD++ Y T++ GL G ++ L +M++ +
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV 259
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
I+ ++++S V DL ++ + G R ++ YN+LI LCN ++ A +L
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGP 493
+++ + P+ ++ L+ + + ++ KL ++M + P + F
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 494 IMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
A ++F ++ K + ++ YN L++ K ++ + LF E++ L ++ +Y+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I G+ A +++ I Y L GLC G++D A+++ + +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFK----YLQ 495
Query: 613 SGPME---FMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
ME F+Y+ + CK A KV + P V + +ISG+C ++
Sbjct: 496 KSEMELNIFIYNTMIEGMCK---AGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 670 EARKVFSNLRERKLLTESDT 689
EA +F ++E L S T
Sbjct: 553 EADDLFRKMKEDGTLPNSGT 572
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 189/442 (42%), Gaps = 49/442 (11%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR---MHSDAG 211
+ GY + ++ + + +N A L + M +G P + ++ D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
L + + E R +K V ++N I+D+L + H+++A+ ++ + + G+ VT+
Sbjct: 241 LALNLLNKMEAAR----IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
L+ LC GR + +L M EK P+V + L+ +G L ++ EEM +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
++PD + Y +I G R++E +FK M SK L + Y +L+ F +V
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
G +L +++ G + Y +I+G + A +F+ + + D ++ LL
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 452 LYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVS 510
+++ AL +F YL K + ++
Sbjct: 477 GLCSYGKLDT----------------------------------ALVIFKYLQKSEMELN 502
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACEC 568
+ IYN +++ + K G++ +A LF + ++KPD +Y+ I LC L +++A +
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRL--LQEADDL 557
Query: 569 HNKIIEMSCIPSIAAYKCLTKG 590
K+ E +P+ Y L +
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRA 579
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 204/475 (42%), Gaps = 25/475 (5%)
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
R L NR+ D + +D A+ ++ D + V F L+ + + + + ++ +
Sbjct: 51 REILRNRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLG 106
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
+M+ D++ Y++ + + L L V +M K EPD++ ++++ G +
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
R+ + L +M G+ D + +L+ NK L+ +V G + DL Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
++ GLC + A L ++ + + ++ + + +E L +ME
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 472 LGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKK 529
G P + + A + S + EK +V +N L+D+ K G++ +
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 530 ALSLFDEINGANLKPDSFSYSIAI--LC-HVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
A L +E+ ++ PD+ +Y++ I C H L E KQ ++ C+P+I Y
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM---FKFMVSKDCLPNIQTYNT 403
Query: 587 LTKGLCKIGEIDEAMMLVRD-----CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLN 641
L G CK +++ + L R+ +GN + Y+ + ++ D + V
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVT------YTTIIQGFFQAGDCDSAQMVFK 457
Query: 642 EMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
+M+ P + S ++ G+C YG ++ A +F L++ ++ E + +Y+ +
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM--ELNIFIYNTMI 510
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 118/261 (45%), Gaps = 8/261 (3%)
Query: 149 FHWAEKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRM 206
H Q+ + +YN +CM+ N A Q+ + M S+ P+ + + LI
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMH--NRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 207 HSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
R ++ +M + G+ Y I+ + G D A V+ + +
Sbjct: 408 FCKCKRVEDGVELFREMSQR-GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+ +T+ +L+ GLC G++D L + +++ ++F Y ++ + G + W
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAW 523
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
+ ++PDV+ Y T+I+GL + ++E LF++MK G L + Y +L+ + +
Sbjct: 524 DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 387 NKVGAGFDLLKDLVSSGYRAD 407
A +L+K++ SSG+ D
Sbjct: 584 CDRAASAELIKEMRSSGFVGD 604
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 208/465 (44%), Gaps = 26/465 (5%)
Query: 212 RGLRV---YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
RGL + V++ M + P Y+ ++ L G L+ A + D E G
Sbjct: 242 RGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPST 301
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
T+ VL+K LC G ID+ + M + C+P+V YTVL+ L G ++ V +
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M KDR+ P V+ Y +I G GRV + L M+ + + + L+E V K
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
LLK ++ +G D+ YN LI+GLC A+KL +EPD L+
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481
Query: 449 LLVLYAEAKRMENFYKLLQQM--------EKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
++ + + + + L M E G +ID + + + + + LE
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG----KTRDALFILE-- 535
Query: 501 SYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
+ +K + + N+++D L K ++K+ L++ +IN L P +Y+ + + G
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 561 EIKQACECHNKIIEM----SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
+I + +I+E+ C+P++ Y + GLC+ G ++EA L+ + + P
Sbjct: 596 DITGS----FRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLL-SAMQDSGVSPN 650
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISG 661
Y++ V + ++ + + M+++G + + S+++ G
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 190/434 (43%), Gaps = 43/434 (9%)
Query: 252 ALSVYDDF-KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLV 310
AL V+D KE V++ +L+ GLC+ GR++E + +M EK C+P YTVL+
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
+ L +G +D +++EM +P+V Y +I GL G++EE + ++M
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
Y +L+ + +V F+LL + + ++ +N L+EGLC + K KA L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE- 489
+ + GL PD +S L+ M YKLL M F + D F +I
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN--CFDIEPDCLTFTAIINAF 486
Query: 490 -KKGPIMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
K+G F L + +S+D L+D + KVG+ + AL + + + +
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
S ++ + ++K+ KI ++ +PS+ Y L GL + G+I +
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR---- 602
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
+L M GC P + +I+G+C++G
Sbjct: 603 --------------------------------ILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 667 TIEEARKVFSNLRE 680
+EEA K+ S +++
Sbjct: 631 RVEEAEKLLSAMQD 644
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 100/508 (19%), Positives = 214/508 (42%), Gaps = 36/508 (7%)
Query: 164 SYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYE 221
+YNA YC ++ A +L +M+ + P+ + F L+ G+ + H+ +
Sbjct: 373 TYNALINGYC--KDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
+M + G+ P + YN ++D L R GH++ A + ++ + +TF ++ C+
Sbjct: 431 RMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
G+ D LG M K D T L+ + G L + E + K R+ +
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
I+ LS G +V+E + ++ G + Y +LV+ + + F +L+ +
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
SG ++ Y +I GLC + E+A KL G+ P+ ++ ++ Y +++
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 462 FYKLLQQMEKLGFPVIDDL--------------------ARFFSIFVEKKGPIMALEVFS 501
+ ++ M + G+ + D + + I + + P E+ S
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELIS 729
Query: 502 YLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEI--NGANLKPDSFSYSIAILCHVDL 559
+++ G + L+ L K G ++ L + G L+ + I + +
Sbjct: 730 VVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK---AMDIIMESYCSK 786
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPME-- 617
+ + E +++ +PS ++ + +GL K G+ + A LV + L ++G +E
Sbjct: 787 KKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL--TSNGVVEKS 844
Query: 618 --FMYSLTVIHACKSNDAEKVIGVLNEM 643
Y ++ ++ D +VI +++++
Sbjct: 845 GVLTYVECLMEGDETGDCSEVIDLVDQL 872
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 149/368 (40%), Gaps = 52/368 (14%)
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
YV ++ M++ G ++ Y ++V + A + ++ G+ D I +L+
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 417 GLCNLNKFEKAHKLFQVTIQE-GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
G C A K+F V +E P+ +S L+ E R+E + L QM
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM------ 292
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLF 534
EKG S Y +L+ +L G + KA +LF
Sbjct: 293 ----------------------------GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLF 324
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
DE+ KP+ +Y++ I G+I++A K+++ PS+ Y L G CK
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 595 GEIDEAMMLV-----RDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
G + A L+ R C NV + E M L C+ K + +L M+ G
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFN-ELMEGL-----CRVGKPYKAVHLLKRMLDNGLS 438
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVM 709
P V + +I G+C+ G + A K+ S++ + E D + + + K+ AD+
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI--EPDCLTFTAIINAFCKQGKADVAS 496
Query: 710 SGLKFFGL 717
+ F GL
Sbjct: 497 A---FLGL 501
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 156/373 (41%), Gaps = 24/373 (6%)
Query: 326 WEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF-- 383
+ M+ D ++ Y TI+ L G E + ++ G ++D I SL+ F
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 384 -VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ + FD++ V+ + Y+ LI GLC + + E+A L ++G +P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNS--VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP--------VIDDLARFFSIFVEKKGPI 494
+ L+ + ++ + L +M G +ID L R I E G
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI-EEANGVC 359
Query: 495 MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPD--SFSYSIA 552
+ +K++ + SV YN L++ K G + A L + KP+ +F+ +
Sbjct: 360 RKM-----VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELME 414
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
LC V G+ +A ++++ P I +Y L GLC+ G ++ A L+ +
Sbjct: 415 GLCRV--GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS-MNCFD 471
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P ++ + CK A+ L M+++G V + +I G+CK G +A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 673 KVFSNLRERKLLT 685
+ L + ++LT
Sbjct: 532 FILETLVKMRILT 544
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 136/304 (44%), Gaps = 29/304 (9%)
Query: 395 LLKDLVSSG-YRADLGIYNNLIEGLCNLNK--------FEKAHKLFQVTIQEGLEPDFLS 445
LLK +VSSG YR + LI+ K F++ ++F G ++
Sbjct: 109 LLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVF------GFRLNYPC 162
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF-SYLK 504
LL+ A+ Y ++ME GF V R + K G A E+F S +
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 505 EKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEING-ANLKPDSFSYSIAILCHVDLGEI 562
+ G+V I L+ + ++ AL +FD ++ P+S SYSI I ++G +
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM-----MLVRDCLGNVTSGPME 617
++A +++ E C PS Y L K LC G ID+A M+ R C NV +
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT---- 338
Query: 618 FMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSN 677
Y++ + C+ E+ GV +M++ P + +A+I+G CK G + A ++ +
Sbjct: 339 --YTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 678 LRER 681
+ +R
Sbjct: 397 MEKR 400
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 205/458 (44%), Gaps = 40/458 (8%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G +P ++ +++ L G + AL + D E G +T LV GLC G++
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ + ++ RM E +P+ Y +++++ G + + +M++ +++ D + Y+ II
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL G ++ + LF EM+ KG D IY +L+ F + G LL+D++
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
D+ ++ LI+ K +A +L + IQ G+ PD ++ L+ + + +++ +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 466 LQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVG 525
L M G GP ++ +NIL++ K
Sbjct: 375 LDLMVSKGC-----------------GP----------------NIRTFNILINGYCKAN 401
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+ L LF +++ + D+ +Y+ I +LG+++ A E +++ P I +YK
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEF---MYSLTVIHACKSNDAEKVIGVLNE 642
L GLC GE ++A+ + + ME +Y++ + C ++ + +
Sbjct: 462 ILLDGLCDNGEPEKALEIFE----KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ +G P + +I G+CK G++ EA +F + E
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 193/416 (46%), Gaps = 9/416 (2%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G+ + NA + N A L + M G P+E + ++++ +G+
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ KM + +K Y+ I+D L + G LD A +++++ + G + + + L
Sbjct: 230 LAMELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
++G C AGR D+ ++L M ++ PDV A++ L+ V +G L + +EM + +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
PD + Y ++I G ++++ + M SKG + + L+ + N + G +
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L + + G AD YN LI+G C L K E A +LFQ + + PD +S K LL
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM----ALEVFSYLKEKGYV- 509
+ E ++ +++EK + D+ ++I + A ++F L KG
Sbjct: 469 DNGEPEKALEIFEKIEKSKMEL--DIG-IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
V YNI++ L K G + +A LF ++ P+ +Y+I I H+ G+ ++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 192/459 (41%), Gaps = 79/459 (17%)
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
+PR+ ++R+ + RT DL L + + G+ T +++ C+
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCR--------- 119
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
CR A++ + +I+ K EPD + ++T+I GL
Sbjct: 120 ---------CRKLSLAFSAMGKII-----------------KLGYEPDTVTFSTLINGLC 153
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
GRV E L+DR +V G++ L
Sbjct: 154 LEGRVSEAL----------ELVDR-------------------------MVEMGHKPTLI 178
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
N L+ GLC K A L ++ G +P+ ++ P+L + ++ + +LL++M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 470 EKLGFPVIDDLARFFSIFVE---KKGPI-MALEVFSYLKEKGY-VSVDIYNILMDSLHKV 524
E+ + A +SI ++ K G + A +F+ ++ KG+ + IY L+
Sbjct: 239 EERKIKLD---AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
G L ++ + PD ++S I C V G++++A E H ++I+ P Y
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
L G CK ++D+A ++ D + + GP +++ + CK+N + + + +M
Sbjct: 356 TSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
+G V + +I G C+ G +E A+++F + R++
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 114/274 (41%), Gaps = 36/274 (13%)
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
K + A LFQ + P + L + A K+ + L +QME G
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG--------- 102
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
+A +++ +I+++ + ++ A S +I
Sbjct: 103 ------------IAHNLYT------------LSIMINCCCRCRKLSLAFSAMGKIIKLGY 138
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
+PD+ ++S I G + +A E ++++EM P++ L GLC G++ +A++
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 603 LVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
L+ D + P E Y + CKS + +L +M ++ V S +I G+
Sbjct: 199 LI-DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 663 CKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
CK G+++ A +F+ + + ++D I+Y +
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGF--KADIIIYTTLI 289
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 185/402 (46%), Gaps = 41/402 (10%)
Query: 212 RGLRVYHVYEKM-RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
R V +VY++M R K ++P VF +N +++AL +TG ++ A V +D K G V+
Sbjct: 203 RSADVEYVYKEMIRRK--IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVS 260
Query: 271 FMVLVKGLCQAGRIDEMLE---VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
+ L+ G C+ G +M + VL M E P++ + +L+ NL G ++V++
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
EM V+P+V++Y ++I GL NGG++ E + +M S G + Y +L+ F +
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
+ D+ + G +YN LI+ C L K + L + +EG+ PD +
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
L+ +E KL Q+ G P DL F
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKGLP---DLVTF------------------------ 473
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ILM+ + GE +KA L E++ LKP +Y+I + + G +K A
Sbjct: 474 -------HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 568 CHNKI-IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL 608
++ E ++A+Y L +G + G++++A ML+ + L
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 158/365 (43%), Gaps = 43/365 (11%)
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
V++EM + +++P+V + +I L G++ + + ++MK G + Y +L++ +
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 385 AVNKVGAGFD---LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ G + +LK++V + +L +N LI+G + + K+F+ + + ++P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFS 501
+ +S L+ ++ + +M G
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP------------------------- 364
Query: 502 YLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
++ YN L++ K +K+AL +F + G P + Y++ I + LG+
Sbjct: 365 --------NLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
I ++ +P + Y CL GLC+ G I+ A L +TS + + +
Sbjct: 417 IDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL----FDQLTSKGLPDLVT 472
Query: 622 LTVIHA--CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL- 678
++ C+ ++ K +L EM + G P ++ + V+ G CK G ++ A + + +
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQME 532
Query: 679 RERKL 683
+ER+L
Sbjct: 533 KERRL 537
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 146/349 (41%), Gaps = 44/349 (12%)
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+AYA N R E G+ FK G+ + L+ + + N+ + K
Sbjct: 160 VLAYA-------NNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYK 212
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+++ + ++ +N +I LC K KA + + G P+ +S L+ Y +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNIL 517
YK ++++ V +D++ + F NIL
Sbjct: 273 GNGKMYKADAVLKEM---VENDVSPNLTTF---------------------------NIL 302
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+D K + ++ +F E+ ++KP+ SY+ I + G+I +A +K++
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT---SGPMEFMYSLTVIHACKSNDAE 634
P++ Y L G CK + EA+ D G+V + P MY++ + CK +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEAL----DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
+ EM ++G P + +I+G+C+ G IE A+K+F L + L
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 132/559 (23%), Positives = 240/559 (42%), Gaps = 78/559 (13%)
Query: 108 KNGYKWGPPV----VTELSKLRRVTPSL-VAEVLKVQTNPTLS------FKFFHWAEKQK 156
++ YK PP+ T+ +R+V PSL V V+ + + LS F FF + Q
Sbjct: 54 RDSYK-DPPLEFSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQP 112
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDS-QGKPPSEKQFEILIRM--------- 206
G+ +Y A + + A L EL+ S +GK + F L+ M
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFL 172
Query: 207 -------HSDAG---RGLRVYHVYEKMRNKFGVKPR------------------------ 232
++D G ++ + + K R F V R
Sbjct: 173 VDALMITYTDLGFIPDAIQCFRLSRKHR--FDVPIRGCGNLLDRMMKLNPTGTIWGFYME 230
Query: 233 ---------VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
V+++N +M+ + G++ A V+D+ + L V+F L+ G C+ G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+DE + +M + RPDVF Y+ L+ L + +DG +++EM K + P+ + + T
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
+I G S G ++ +++M SKG D +Y +LV F + A +++ ++ G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY 463
R D Y LI+G C E A ++ + Q G+E D + L+ + R+ +
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 464 KLLQQMEKLGFPVID-DLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSL 521
+ L++M + G D F +K ++ ++ G+V SV YN+L++ L
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
K+G+MK A L D + + PD +Y+ + H + + + + E+ + +
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIVADL 587
Query: 582 AAYKCLTKGLCKIGEIDEA 600
A+YK + + E+D A
Sbjct: 588 ASYKSI------VNELDRA 600
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 163/378 (43%), Gaps = 48/378 (12%)
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEP--DVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
L+ ++V + + V+ + + RV P + A +IT ++ G + + F+ S
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMIT-YTDLGFIPDAIQCFR--LS 196
Query: 367 KGHLIDRAIYG--SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+ H D I G +L++ + +N G + +++ +G+ ++ ++N L+ C
Sbjct: 197 RKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNI 256
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
A K+F + L+P +S L+ Y + ++ ++L QMEK
Sbjct: 257 SDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK------------- 303
Query: 485 SIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP 544
+ P +VF+Y + L+++L K +M A LFDE+ L P
Sbjct: 304 ----SRTRP----DVFTY------------SALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 545 DSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+ ++ I H GEI E + K++ P I Y L G CK G++ A +V
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 605 RDCLGNVTSG--PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
G + G P + Y+ + C+ D E + + EM Q G V SA++ GM
Sbjct: 404 D---GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 663 CKYGTIEEARKVFSNLRE 680
CK G + +A + LRE
Sbjct: 461 CKEGRVIDAERA---LRE 475
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 3/180 (1%)
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
L+D + K+ + EI A + + ++I + G I A + ++I + S
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV 636
P++ ++ L G CK+G +DE L + + + P F YS + CK N +
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 637 IGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
G+ +EM ++G P +V+ + +I G + G I+ ++ + + + L + D ++Y+ +
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGL--QPDIVLYNTLV 387
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 137/571 (23%), Positives = 244/571 (42%), Gaps = 59/571 (10%)
Query: 116 PVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRN 175
P+V LSK +++ V+K + N L F+FF WA +++ S+ ++ +
Sbjct: 53 PLVPFLSK------NIITSVIKDEVNRQLGFRFFIWASRRERLRSR-ESFGLVIDMLSED 105
Query: 176 NHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFL 235
N Q E + S G F +LI ++ G + + +M+ +F +P VF
Sbjct: 106 NGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK-EFDCRPDVFT 164
Query: 236 YNRIMDALIRTG-HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM 294
YN I+ ++R LA +VY++ + TF +L+ GL + GR + ++ M
Sbjct: 165 YNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM 224
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
+ P+ YT+L+ L +G+ D +++ EM+ PD +A+ ++ G GR+
Sbjct: 225 TGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRM 284
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
E + L + + G ++ Y SL++ + F+L +++ + D+ +Y L
Sbjct: 285 VEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTIL 344
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL-LQQMEKLG 473
I+GL K E A KL +G+ PD ++ +E L L+ E
Sbjct: 345 IQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 474 FPVIDDLARFFSIFVEKKGPIM--ALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKA 530
FP D I + ++ A E+F+ +++ G SV +N L+D L K GE+K+A
Sbjct: 405 FP--DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Query: 531 LSLFDEINGANLKPDSF------SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
L ++ +P S S + + V+ G I +A + P I +Y
Sbjct: 463 RLLLHKMEVG--RPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSY 520
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
L G C+ G+ID A+ L LN +
Sbjct: 521 NVLINGFCRAGDIDGALKL------------------------------------LNVLQ 544
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+G P +V + +I+G+ + G EEA K+F
Sbjct: 545 LKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 136/397 (34%), Gaps = 112/397 (28%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+F+ EK G+ Y++ + R + A +L M + P + ILI
Sbjct: 287 AFELLRLFEKD-GFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILI 345
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI-------------------- 244
+ S AG+ + M +K G+ P + YN ++ AL
Sbjct: 346 QGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES 404
Query: 245 ---------------RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
R G + A ++ + ++ G TF L+ GLC++G + E
Sbjct: 405 FPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL 464
Query: 290 VLGRMR---------------------------------------EKLCRPDVFAYTVLV 310
+L +M + PD+ +Y VL+
Sbjct: 465 LLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLI 524
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
G++DG L++ ++ + PD + Y T+I GL GR EE + LF H
Sbjct: 525 NGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH- 583
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDL-------------------------------LKDL 399
A+Y SL+ KV F+L L+ L
Sbjct: 584 -SPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRL 642
Query: 400 VSSGYRAD---LGIYNNLIEGLCNLNKFEKAHKLFQV 433
+ R D LG Y + GLC +F +A +F V
Sbjct: 643 IELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSV 679
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 148/637 (23%), Positives = 265/637 (41%), Gaps = 75/637 (11%)
Query: 116 PVVTELSKL-----RRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAY 170
PV +++S L ++ S++ +L + NP + +F++WA +G + + +
Sbjct: 55 PVTSKVSLLSAKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIH 114
Query: 171 CM--NRNNHHRAADQLPELMDSQGKPP--------------------SEKQFEILIRMHS 208
+ + + RA+D L + + P + + F L+ +S
Sbjct: 115 ILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYS 174
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
+ + +M + V P NR + AL++ L A +Y G+D +
Sbjct: 175 KDRQTDHAVDIVNQML-ELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDN 233
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGR--------------------------------MRE 296
VT +L++ + + E LEVL R +RE
Sbjct: 234 VTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLRE 293
Query: 297 ----KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
KLC P YT ++ V QGN+D +R+ +EM D + +V+A ++ITG
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+ VLF +M+ +G + + L+E F ++ + K + G + +
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH 413
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
+I+G K E+A KLF + + GL F+ +L + + + +LL +ME
Sbjct: 414 TIIQGWLKGQKHEEALKLFDESFETGLANVFV-CNTILSWLCKQGKTDEATELLSKMESR 472
Query: 473 GF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-IYNILMDSLHKVGEMKKA 530
G P + +K +A VFS + EKG + Y+IL+D + + + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 531 LSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMS--CIPSIAAYKC 586
L + + + +N++ + Y I LC V G+ +A E +IE C+ S +Y
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKV--GQTSKARELLANMIEEKRLCV-SCMSYNS 589
Query: 587 LTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ 646
+ G K GE+D A+ + GN S P Y+ + CK+N ++ + + +EM +
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGIS-PNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
G A+I G CK +E A +FS L E L
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 187/413 (45%), Gaps = 39/413 (9%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L M+S+G P+ + ++ H V+ + K G+KP + Y+ ++
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYSILI 520
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE--KL 298
D R AL V + ++ V + ++ GLC+ G+ + E+L M E +L
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
C +Y ++ +G +D + +EEM + + P+V+ Y +++ GL R+++
Sbjct: 581 C-VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+ EMK+KG +D YG+L++ F + + + L +L+ G IYN+LI G
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID 478
NL A L++ +++GL D + L ID
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTL---------------------------ID 732
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEI 537
L + ++ I+A E+++ ++ G V +I Y ++++ L K G+ K + +F+E+
Sbjct: 733 GLLKDGNL-------ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
N+ P+ Y+ I H G + +A H+++++ +P A + L G
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 223/536 (41%), Gaps = 41/536 (7%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N + + +NN +A L + M+ +G P+ F +LI G +
Sbjct: 334 GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKA 393
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
Y+KM G+ P VF + I+ ++ + AL ++D+ E GL V +L
Sbjct: 394 LEFYKKME-VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTIL-S 451
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
LC+ G+ DE E+L +M + P+V +Y ++ Q N+D V+ + + ++P
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+ Y+ +I G + + M S ++ +Y +++ V + +LL
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 397 KDLVSSGYR-ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
+++ YN++I+G + + A ++ G+ P+ ++ L+ +
Sbjct: 572 ANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCK 631
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-- 513
RM+ ALE+ +K KG V +DI
Sbjct: 632 NNRMDQ----------------------------------ALEMRDEMKNKG-VKLDIPA 656
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
Y L+D K M+ A +LF E+ L P Y+ I +LG + A + + K++
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
+ + Y L GL K G + A L + + V P E +Y++ V K
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTE-MQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
KV+ + EM + P ++ +AVI+G + G ++EA ++ + ++ +L + T
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 148/329 (44%), Gaps = 2/329 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+KG N +Y+ RN+ + A ++ M S + ++ +I G+
Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTS 565
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ + M + + YN I+D + G +D A++ Y++ +G+ +T+ L
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ GLC+ R+D+ LE+ M+ K + D+ AY L+ + N++ ++ E+ ++ +
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
P Y ++I+G N G + L+K+M G D Y +L++ + + +
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L ++ + G D IY ++ GL +F K K+F+ + + P+ L ++ +
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARF 483
++ ++L +M G ++ D A F
Sbjct: 806 REGNLDEAFRLHDEMLDKG--ILPDGATF 832
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N +Y + + +NN A ++ + M ++G + LI
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
++ ++ + G+ P +YN ++ G++ AL +Y +DGL + T+ L+
Sbjct: 674 SALFSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GL + G + E+ M+ PD YTV+V L +G ++++EEMKK+ V P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA 385
+V+ Y +I G G ++E + L EM KG L D A + LV V
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVG 841
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Query: 154 KQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG 211
K KG + +Y A +C R+N A+ EL++ +G PS+ + LI + G
Sbjct: 646 KNKGVKLDIPAYGALIDGFC-KRSNMESASALFSELLE-EGLNPSQPIYNSLISGFRNLG 703
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
+ +Y+KM K G++ + Y ++D L++ G+L LA +Y + + GL + + +
Sbjct: 704 NMVAALDLYKKML-KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
V+V GL + G+ +++++ M++ P+V Y ++ +GNLD R+ +EM
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 332 DRVEPDVMAYATIITG 347
+ PD + +++G
Sbjct: 823 KGILPDGATFDILVSG 838
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
SYN+ + +A E M G P+ + L+ R + + ++M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
+NK GVK + Y ++D + +++ A +++ + E+GL+ + + L+ G G
Sbjct: 646 KNK-GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+ L++ +M + R D+ YT L+ L+ GNL ++ EM+ + PD + Y
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
I+ GLS G+ + +F+EMK + IY +++ + F L +++ G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 404 YRADLGIYNNLIEG 417
D ++ L+ G
Sbjct: 825 ILPDGATFDILVSG 838
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/561 (22%), Positives = 230/561 (40%), Gaps = 42/561 (7%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K KG + +YN + + R+N L M + P+E + LI S+ G+
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
L + +M + FG+ P +N ++D I G+ AL ++ + GL V++ V
Sbjct: 355 LIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ GLC+ D RM+ YT ++ L G LD + + EM KD
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++PD++ Y+ +I G GR + + + G + IY +L+ + + +
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+ + ++ G+ D +N L+ LC K +A + + +G+ P+ +S L+ Y
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 454 AEAKRMENFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVF--SYLKEKGYVS 510
+ + + +M K+G P K G + E F S V
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC-KGGHLREAEKFLKSLHAVPAAVD 652
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS-------------IAIL--- 554
+YN L+ ++ K G + KA+SLF E+ ++ PDS++Y+ IAIL
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 555 ----------------CHVD----LGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
C VD G+ K ++ + P I + G ++
Sbjct: 713 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 772
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
G+I++ L+ + +GN GP Y++ + K D + ++ G P +
Sbjct: 773 GKIEKTNDLLPE-MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Query: 655 CSAVISGMCKYGTIEEARKVF 675
C +++ G+C+ +E K+
Sbjct: 832 CHSLVLGICESNMLEIGLKIL 852
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 214/528 (40%), Gaps = 11/528 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++ GY +YN + + +AA +L + M S+G + +LI + R
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ Y + MR + + P YN +++ G + +A + ++ GL VTF
Sbjct: 320 AKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G G E L++ M K P +Y VL+ L D + MK++
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
V + Y +I GL G ++E VL EM G D Y +L+ F V + F
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR----F 494
Query: 394 DLLKDLVSSGYRADLG----IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
K++V YR L IY+ LI C + ++A ++++ I EG D + L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 450 LVLYAEAKRMENFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
+ +A ++ + ++ M G P + + + A VF + + G+
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 509 -VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ Y L+ L K G +++A ++ D+ Y+ + G + +A
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
++++ S +P Y L GLC+ G+ A++ ++ P + MY+ V
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
K+ + I +M G P V +A+I G + G IE+ +
Sbjct: 735 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/559 (21%), Positives = 245/559 (43%), Gaps = 19/559 (3%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
+G+ + ++N + + A++ M S G P+ F+ LI + ++G GL+
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
+ V+++M K G P F Y ++ L + GHL A + V + L+
Sbjct: 602 AFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG-NLDGCLRVWEEMKKDRV 334
+C++G + + + + G M ++ PD + YT L+ L +G + L E + V
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
P+ + Y + G+ G+ + G ++M + GH D ++++ + + K+ D
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
LL ++ + +L YN L+ G + L++ I G+ PD L+ L++
Sbjct: 781 LLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARF-FSIFVEK---KGPI-MALEVFSYLKEKGY- 508
E+ +E K+L+ G V R+ F++ + K G I A ++ + G
Sbjct: 841 ESNMLEIGLKILKAFICRGVEV----DRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQAC 566
+ D + ++ L++ +++ + E++ + P+S Y I LC V G+IK A
Sbjct: 897 LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV--GDIKTAF 954
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH 626
++I P A + + L K G+ DEA +L+R L + P ++ +
Sbjct: 955 VVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML-KMKLVPTIASFTTLMHL 1013
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
CK+ + + + + M G V + +I+G+C G + A +++ ++ L
Sbjct: 1014 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Query: 687 SDTIVYDEFLIDHMKKKTA 705
+ T Y + + ++TA
Sbjct: 1074 ATT--YKALIRGLLARETA 1090
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 135/608 (22%), Positives = 233/608 (38%), Gaps = 94/608 (15%)
Query: 144 LSFKFFHWAEKQKGYH--HNFASYNAFAYCMNRNNHHRAADQ-LPELMDSQGKPP----- 195
L+ KF W KQ G H + + R + A L EL GK
Sbjct: 92 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGA 151
Query: 196 ----------SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
+ ++ILIR++ G ++ M +G P V+ N I+ ++++
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVK 210
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
+G +SV+ KE ++ K+C PDV
Sbjct: 211 SGE---DVSVWSFLKE-------------------------------MLKRKIC-PDVAT 235
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+ +L+ +L +G+ + + ++M+K P ++ Y T++ GR + L MK
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
SKG D Y L+ N++ G+ LL+D+ + YN LI G N K
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP--------VI 477
A +L + GL P+ ++ L+ + + K+ ME G ++
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 478 D--------DLARFFSIFVEKKGPIMALEVFS----------YLKE---------KGYVS 510
D DLAR F + +++ G + ++ +L E K +
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID 475
Query: 511 VDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
DI Y+ L++ KVG K A + I L P+ YS I +G +K+A
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRI 535
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ +I + L LCK G++ EA +R C+ + P + +
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR-CMTSDGILPNTVSFDCLINGYG 594
Query: 629 KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
S + K V +EM + G P +++ G+CK G + EA K +L + D
Sbjct: 595 NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA--VPAAVD 652
Query: 689 TIVYDEFL 696
T++Y+ L
Sbjct: 653 TVMYNTLL 660
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/521 (20%), Positives = 222/521 (42%), Gaps = 39/521 (7%)
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
++ LM G PS ++ +G + V+ ++M + + P V +N +++
Sbjct: 184 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR-KICPDVATFNILINV 242
Query: 243 LIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
L G + + + ++ G VT+ ++ C+ GR +E+L M+ K D
Sbjct: 243 LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDAD 302
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
V Y +L+ L + + +M+K + P+ + Y T+I G SN G+V L
Sbjct: 303 VCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN 362
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKV-------------------------------GA 391
EM S G + + +L++ ++ A
Sbjct: 363 EMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNA 422
Query: 392 GFDLLKDLVSSGYRADLGI----YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
FDL + R + + Y +I+GLC ++A L ++G++PD ++
Sbjct: 423 EFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYS 482
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM-ALEVFSYLKEK 506
L+ + + R + +++ ++ ++G + + G + A+ ++ + +
Sbjct: 483 ALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILE 542
Query: 507 GYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
G+ +N+L+ SL K G++ +A + + P++ S+ I + + GE +A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
+++ ++ P+ Y L KGLCK G + EA ++ L V + MY+ +
Sbjct: 603 FSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS-LHAVPAAVDTVMYNTLLT 661
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
CKS + K + + EM+Q+ P + +++ISG+C+ G
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
+K G+ P Y +++ L R G + A V ++ + V +V+ L + G+
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
DE +L M + P + ++T L+ + GN+ L + M ++ D+++Y +
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD-LLKDLVSSG 403
ITGL G + + L++EMK G L + Y +L+ +A +G D +LKDL++ G
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARG 1105
Query: 404 YRADLGI 410
+ + +
Sbjct: 1106 FITSMSL 1112
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 211/462 (45%), Gaps = 12/462 (2%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
+NA C+ RN + L MD P ILI + R V+EKMR
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 225 NKFG-----VKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVTFMVLVKGL 278
K +K +N ++D L + G L A + K E+ VT+ L+ G
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+AG+++ EV+ RM+E +P+V +V + L+ + + +M+K+ V+ +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
+ Y T+I + VE+ +++M G D IY +L+ V + +++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
L G+ DL YN LI C+ N EK +++ +EG +PD ++ L+ + + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 459 MENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD--IYN 515
E+ ++++QM + G P + + AL++F + V+ + IYN
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
IL+++ K+G +ALSL +E+ ++P+ +Y+ C + + + + ++++E
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPME 617
SC P+ + L + ++ DE + L + G + P E
Sbjct: 717 SCEPNQITMEILME---RLSGSDELVKLRKFMQGYSVASPTE 755
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/531 (23%), Positives = 228/531 (42%), Gaps = 55/531 (10%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAA-DQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL- 214
G N F + +N AA D L +LM ++ P F L+ S GR +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNK-TPLEAPPFNALL---SCLGRNMD 309
Query: 215 --RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK----EDG--LDE 266
R+ + KM ++ ++P V +++ L ++ +D AL V++ + +DG +
Sbjct: 310 ISRMNDLVLKM-DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVLVRILVPQGNLDGCLRV 325
+ + F L+ GLC+ GR+ E E+L RM+ E+ C P+ Y L+ G L+ V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 326 WEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA 385
MK+D ++P+V+ TI+ G+ + V F +M+ +G + Y +L+ + +
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 386 VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
V+ V + ++ +G D IY LI GLC + + A ++ + + G D L+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLK 504
L+ L+ + E Y++L MEK G P S F + K + ++
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 505 EKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEIN-GANLKPDSFSYSIAILCHVDLGEI 562
E G +V Y ++D+ VGE+ +AL LF ++ + + P++ Y+I I LG
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL 622
QA ++ P++ Y L K CL T G
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFK-----------------CLNEKTQG-------- 703
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARK 673
E ++ +++EM++Q C P + ++ + + + RK
Sbjct: 704 -----------ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRK 743
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 188/437 (43%), Gaps = 37/437 (8%)
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
D L +Y+ KE + V +L++ + G +++ + V R+ + V V+
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQV--RNVV 191
Query: 310 VRILVPQGNLDGCLRVWEEM-KKDRVEPDVMAYATIITGLSNGGRV---EEGYVLFKEMK 365
V +L+ G +D +V +EM +K+ V P A I+ GR+ E+ L
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFS 251
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
S G + + S + A +D+L DL+ + + +N L+ L
Sbjct: 252 SHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS 311
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFS 485
+ + L + + PD +++ L+ +++R++ + L+ EK+ DD
Sbjct: 312 RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD---EALEVFEKMRGKRTDD------ 362
Query: 486 IFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEIN-GANLKP 544
G ++ + + N L+D L KVG +K+A L + P
Sbjct: 363 ------GNVIKADSIHF------------NTLIDGLCKVGRLKEAEELLVRMKLEERCAP 404
Query: 545 DSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
++ +Y+ I + G+++ A E +++ E P++ + G+C+ ++ A++
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 605 RDCLGNVTSGPMEFMYSLTVIHACKS-NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMC 663
D G + +T+IHAC S ++ EK + +M++ GC P + A+ISG+C
Sbjct: 465 MDMEKEGVKG--NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 664 KYGTIEEARKVFSNLRE 680
+ +A +V L+E
Sbjct: 523 QVRRDHDAIRVVEKLKE 539
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/574 (18%), Positives = 235/574 (40%), Gaps = 33/574 (5%)
Query: 129 PSLVAEVLKVQTNPTLSFKFFHWAE------KQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
P + +++ + + +L+ FF + + K++ + A + + + +
Sbjct: 78 PLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLL 137
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
+L E+ + P + +LIR G + VYE++ + + N ++D
Sbjct: 138 RLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQ---VRNVVVDV 194
Query: 243 LIRTGHLDLALSVYDDF--KEDGLDEERVTFMVLVKGLCQAGRI---DEMLEVLGRMREK 297
L+R G +D A V D+ KE R+T +++ + + GR+ ++++ ++ R
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWK-GRLLTEEKIIALISRFSSH 253
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
P+ T + L + + ++ K++ + + +++ L +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI------- 410
L +M D G L+ + +V ++ + + G R D G
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKM--RGKRTDDGNVIKADSI 371
Query: 411 -YNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
+N LI+GLC + + ++A +L ++ ++E P+ ++ L+ Y A ++E +++ +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 469 MEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGE 526
M++ P + + G MA+ F ++++G +V Y L+ + V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 527 MKKALSLFDEINGANLKPDSFSYS--IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
++KA+ ++++ A PD+ Y I+ LC V A K+ E + AY
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH--DAIRVVEKLKEGGFSLDLLAY 549
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
L C ++ ++ D + P Y+ + K D E V ++ +M
Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
+ G P AVI C G ++EA K+F ++
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 154 KQKGYHHNFASYNAFA--YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG 211
K+ G+ + +YN +C ++NN + + L + M+ +GK P + LI
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC-DKNNTEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHK 595
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVT 270
V + E+MR G+ P V Y ++DA G LD AL ++ D ++ V
Sbjct: 596 DFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ +L+ + G + L + M+ K+ RP+V Y L + L + + L++ +EM
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 331 KDRVEPDVMAYATIITGLS 349
+ EP+ + ++ LS
Sbjct: 715 EQSCEPNQITMEILMERLS 733
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/615 (20%), Positives = 251/615 (40%), Gaps = 61/615 (9%)
Query: 123 KLRRVTPSLVAEVLK-VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNN----- 176
+L P+L+ VL ++ P ++F+FF+W ++Q + ++ A + N+
Sbjct: 79 RLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEA 138
Query: 177 -----------HHRAADQLP---------------------------------ELMDSQG 192
H D L E M +G
Sbjct: 139 YLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKG 198
Query: 193 KPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
PS + I++++ D+ + VYE M + G+ P V +N ++D+ + G L+
Sbjct: 199 FLPSVRNCNIVLKVLRDSRMMNKASAVYETMI-EHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRI 312
++ + K ++ VT+ +L+ G + G+++E G MR +++ L+
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 313 LVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID 372
QG D V +EM + P Y I L + GR+++ L M + D
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----D 373
Query: 373 RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
Y +L+ ++ + K L DL + + YN LI+GLC E A +L +
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKK- 491
+ + PD ++ L+ + + + ++ +M + G D A E +
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP-DGYAYTTRAVGELRL 492
Query: 492 -GPIMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
A + + + + D IYN+ +D L KVG + KA+ +I L PD +
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL 608
Y+ I +++ G+ K A +++++ PS+ Y L G K G +++A + +
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE-M 611
Query: 609 GNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTI 668
P ++ + CK+ + ++ L +M ++G PP + +IS C +
Sbjct: 612 KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW 671
Query: 669 EEARKVFSNLRERKL 683
EE K++ + ++++
Sbjct: 672 EEVVKLYKEMLDKEI 686
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 187/460 (40%), Gaps = 43/460 (9%)
Query: 149 FHWAEKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRM 206
FH ++ G+ S+N YC + A + + M + G P+ + I I
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYC--KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 207 HSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
D GR + M P V YN +M I+ G A ++DD + +
Sbjct: 353 LCDFGRIDDARELLSSM-----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP 407
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
VT+ L+ GLC++G ++ + M +L PDV YT LV+ V GNL V+
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM-KSKGHLIDRAIYGSLVESFVA 385
+EM + ++PD AY T G G ++ + L +EM + H D IY ++
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 386 VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
V + + + + G D Y +I G +F+ A L+ +++ L P ++
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE 505
L+ +A+A R+E ++ +M+K G
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP----------------------------- 618
Query: 506 KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
+V +N L+ + K G + +A ++ + P+ +SY++ I + D + ++
Sbjct: 619 ----NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEV 674
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
+ + ++++ P ++ L K L K E E L R
Sbjct: 675 VKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLER 714
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/455 (22%), Positives = 205/455 (45%), Gaps = 17/455 (3%)
Query: 111 YKWGPPVVTELSKLR-RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
+KWG L R+ +VLK N + FF+W ++Q G+ H+ +Y
Sbjct: 307 FKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMV 366
Query: 170 YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV 229
+ R ++L + M G P+ + LI + A +V+ +M+ + G
Sbjct: 367 GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ-EAGC 425
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
+P Y ++D + G LD+A+ +Y +E GL + T+ V++ L +AG +
Sbjct: 426 EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHR 485
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+ M + C P++ + +++ + N + L+++ +M+ +PD + Y+ ++ L
Sbjct: 486 LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 545
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
+ G +EE +F EM+ K + D +YG LV+ + V + + ++ +G R ++
Sbjct: 546 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVP 605
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
N+L+ +++ +A+ L Q + GL P + LL +A+ + Q M
Sbjct: 606 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLM 665
Query: 470 EKLGFPVIDDLARFFSIFVEKKGP---IMALEVFSYL----KEKGYVSVDIYNILMDSLH 522
G P A F + + GP + V ++L E + + ++D LH
Sbjct: 666 AVSGHP-----AHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLH 720
Query: 523 KVGEMKKALSLFDEINGANLKPDSF---SYSIAIL 554
K G ++A S+++ G N+ PD+ SYS ++
Sbjct: 721 KSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLI 755
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 133/298 (44%), Gaps = 8/298 (2%)
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
R+ + D YT +V L ++ +EM +D +P+ + Y +I +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
+E +F +M+ G DR Y +L++ + D+ + + +G D Y+ +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
I L AH+LF + +G P+ ++ ++ L+A+A+ E KL + M+ GF
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 475 PVIDDLARFFSIFVEKKGPIMALE----VFSYLKEKGYVSVD-IYNILMDSLHKVGEMKK 529
D + +SI +E G LE VF+ ++ K +V + +Y +L+D K G + K
Sbjct: 531 QP-DKVT--YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDK 587
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
A + + A L+P+ + + + + + + +A ++ + PS+ Y L
Sbjct: 588 AWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 128/323 (39%), Gaps = 37/323 (11%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G++ D Y ++ L +F + +KL +++G +P+ ++ L+ Y A ++
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
+ QM++ G E V+ Y L+D
Sbjct: 414 MNVFNQMQEAGC------------------------------EPDRVT---YCTLIDIHA 440
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K G + A+ ++ + A L PD+F+YS+ I C G + A +++ C P++
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
+ + K + A+ L RD + N P + YS+ + E+ GV E
Sbjct: 501 TFNIMIALHAKARNYETALKLYRD-MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI--VYDEFLIDHM 700
M ++ P V ++ K G +++A + + + + L T + FL H
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 701 KKKTADLVMSGLKFFGLESKLKS 723
+ +L+ S L GL L++
Sbjct: 620 MSEAYNLLQSMLA-LGLHPSLQT 641
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/542 (23%), Positives = 232/542 (42%), Gaps = 25/542 (4%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV 233
R N A L M+ + P + F ILI+ D + + K+ K G +P V
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-TKLGFQPDV 176
Query: 234 FLYN----------RIMDAL------IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
+N RI +AL + TG L+ A++++D E GL +TF L+ G
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLING 235
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC GR+ E ++ +M K DV Y +V + G+ L + +M++ ++PD
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ Y+ II L G + LF EM KG + Y +++ F + + LL+
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
D++ D+ +N LI K +A KL + + PD ++ ++ + +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS-VDIYNI 516
R ++ + M P + ++ K +++ + +G V+ YN
Sbjct: 416 RFDDAKHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
L+ +V + A LF E+ + PD+ + +I + + ++++A E ++I+MS
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMS 531
Query: 577 CIP-SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
I AY + G+CK ++DEA L L P Y++ + C +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEF 695
+ ++M G P N + +I G K G I+++ ++ S +R ++ TI E
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEE 650
Query: 696 LI 697
+I
Sbjct: 651 II 652
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 209/481 (43%), Gaps = 73/481 (15%)
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N+++ +R D+A+S+Y + + +F +L+K C ++ L G++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 297 KLCRPDVFAYTVLV-------RI---------LVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
+PDV + L+ RI +V G L+ + ++++M + + P V+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA-VALFDQMVEIGLTPVVIT 228
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+ T+I GL GRV E L +M KG ID YG++V + + +LL +
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
+ + D+ IY+ +I+ LC A LF +++G+ P+ + ++ + R
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILM 518
+ +LL+ M +E++ ++ D+ +N L+
Sbjct: 349 DAQRLLRDM------------------IERE-----------------INPDVLTFNALI 373
Query: 519 DSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI 578
+ K G++ +A L DE+ + PD+ +Y+ I A + ++
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMAS 429
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDC-----LGNVTSGPMEFMYSLTVIHA-CKSND 632
P + + + C+ +DE M L+R+ + N T+ Y+ T+IH C+ ++
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT------YN-TLIHGFCEVDN 482
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+ EM+ G P + C+ ++ G C+ +EEA ++F ++ K+ + DT+ Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAY 540
Query: 693 D 693
+
Sbjct: 541 N 541
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 110/245 (44%), Gaps = 5/245 (2%)
Query: 163 ASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEK 222
+YN+ Y ++N A + +LM S P F +I ++ A R + +
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAG 282
+ + G+ YN ++ +L+ A ++ + G+ + +T +L+ G C+
Sbjct: 458 ISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 516
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
+++E LE+ ++ D AY +++ + +D ++ + VEPDV Y
Sbjct: 517 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+I+G + + VLF +MK GH D + Y +L+ + ++ +L+ ++ S+
Sbjct: 577 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 403 GYRAD 407
G+ D
Sbjct: 637 GFSGD 641
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/573 (22%), Positives = 249/573 (43%), Gaps = 19/573 (3%)
Query: 132 VAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQ 191
V + L+ ++ L+ FF + H ++ + + + L + M Q
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQ 105
Query: 192 GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
G SE F +I ++ G R ++ +++ +FG P V +YN ++D L+ + +
Sbjct: 106 GFHCSEDLFISVISVYRQVGLAERAVEMFYRIK-EFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
VY D K DG + T+ VL+K LC+ ++D ++L M K C PD +YT ++
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
+ G ++ E+ +R EP V Y +I GL + + L +EM KG
Sbjct: 225 SMCEV----GLVKEGREL-AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL--NKFEKAHK 429
+ Y +L+ ++ F L ++ G ++ ++L++G C L F+
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTTFDALDL 338
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFV 488
Q+ GL+P+ ++ L+ + + + ME++G P I + F
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 489 EKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
++ A+ +++ + G +V +Y ++++L + + K+A SL + ++ N P
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEM-SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+++ I D G + A + ++ + C P+I Y L GL K I+EA L R+
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 607 CLGNVTSGPMEFMYSL--TVIH-ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMC 663
+ +E+ S T++H +C + + ++ +MM G P + + +I C
Sbjct: 519 ----IFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574
Query: 664 KYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
K G E A ++ + + D I Y +
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 216/510 (42%), Gaps = 42/510 (8%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K+ G+ N +YN + +NN A +L M ++G P + +I + G
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ E+ +P V +YN +++ L + A + + E G+ +++
Sbjct: 233 KEGRELAERF------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD- 332
L+ LC +G+I+ L +M ++ C P+++ + LV+ +G L +W +M +
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
++P+V+AY T++ G + G + + +F M+ G + YGSL+ F +
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
+ +++SG ++ +Y N++E LC +KF++A L ++ +E P + +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD 512
+A R++ K+ +QME+ + + P ++
Sbjct: 467 LCDAGRLDWAEKVFRQMEQ-----------------QHRCP---------------PNIV 494
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
YN L+D L K +++A L EI ++ S +Y+ + + G A + K+
Sbjct: 495 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKM 554
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEA--MMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
+ P + CK G+ + A M+ + C G P Y+ + C+S
Sbjct: 555 MVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSC-GRRKWRPDVISYTNVIWGLCRS 613
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVIS 660
N E + +L M+ G P S +I+
Sbjct: 614 NCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 2/226 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N Y + R++ + A+ L E+M + PS F I+ DAGR V+
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+M + P + YN ++D L + ++ A + + G++ T+ L+ G C
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK--KDRVEPDV 338
AG L+++G+M PD +++ QG + ++ + + + + PDV
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++Y +I GL E+G +L + M S G + A + L+ F+
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 235/556 (42%), Gaps = 36/556 (6%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV 233
R N A L M+ + P + F ILI+ D + + K+ K G +P V
Sbjct: 118 RMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-TKLGFQPDV 176
Query: 234 FLYN----------RIMDAL------IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
+N RI +AL + TG L+ A++++D E GL +TF L+ G
Sbjct: 177 VTFNTLLHGLCLEDRISEALALFGYMVETGFLE-AVALFDQMVEIGLTPVVITFNTLING 235
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC GR+ E ++ +M K DV Y +V + G+ L + +M++ ++PD
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ Y+ II L G + LF EM KG + Y +++ F + + LL+
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
D++ D+ +N LI K +A KL + + PD ++ ++ + +
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS-VDIYNI 516
R ++ + M P + ++ K +++ + +G V+ YN
Sbjct: 416 RFDDAKHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
L+ +V + A LF E+ + PD+ + +I + + ++++A E ++I+MS
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMS 531
Query: 577 CIP-SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
I AY + G+CK ++DEA L L P Y++ + C +
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEF 695
+ ++M G P N + +I G K G I+++ ++ S +R ++ TI
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI----- 645
Query: 696 LIDHMKKKTADLVMSG 711
K ADL+ G
Sbjct: 646 ------KMVADLITDG 655
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/481 (21%), Positives = 209/481 (43%), Gaps = 73/481 (15%)
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N+++ +R D+A+S+Y + + +F +L+K C ++ L G++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 297 KLCRPDVFAYTVLV-------RI---------LVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
+PDV + L+ RI +V G L+ + ++++M + + P V+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEA-VALFDQMVEIGLTPVVIT 228
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+ T+I GL GRV E L +M KG ID YG++V + + +LL +
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
+ + D+ IY+ +I+ LC A LF +++G+ P+ + ++ + R
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILM 518
+ +LL+ M +E++ ++ D+ +N L+
Sbjct: 349 DAQRLLRDM------------------IERE-----------------INPDVLTFNALI 373
Query: 519 DSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI 578
+ K G++ +A L DE+ + PD+ +Y+ I A + ++
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMAS 429
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDC-----LGNVTSGPMEFMYSLTVIHA-CKSND 632
P + + + C+ +DE M L+R+ + N T+ Y+ T+IH C+ ++
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT------YN-TLIHGFCEVDN 482
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+ EM+ G P + C+ ++ G C+ +EEA ++F ++ K+ + DT+ Y
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI--DLDTVAY 540
Query: 693 D 693
+
Sbjct: 541 N 541
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 104/250 (41%), Gaps = 5/250 (2%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
H+++ M P V +N I+D R +D + + + GL T+ L+ G
Sbjct: 422 HMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
C+ ++ ++ M PD +L+ L+ L ++E ++ +++ D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+AY II G+ G +V+E + LF + G D Y ++ F + + L
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ +G+ D YN LI G + +K+ +L G D ++K + L + +
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656
Query: 458 RMENFYKLLQ 467
++F +L
Sbjct: 657 LDKSFSDMLS 666
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 211/462 (45%), Gaps = 12/462 (2%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
+NA C+ RN + L MD P ILI + R V+E+MR
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 225 NKFG-----VKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVTFMVLVKGL 278
K +K +N ++D L + G L A + K E+ VT+ L+ G
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+AG+++ EV+ RM+E +P+V +V + L+ + + +M+K+ V+ +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
+ Y T+I + VE+ +++M G D IY +L+ V + +++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
L G+ DL YN LI C+ N EK +++ +EG +PD ++ L+ + + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 459 MENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD--IYN 515
E+ ++++QM + G P + + AL++F + V+ + IYN
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
IL+++ K+G +ALSL +E+ ++P+ +Y+ C + + + + ++++E
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPME 617
SC P+ + L + ++ DE + L + G + P E
Sbjct: 717 SCEPNQITMEILME---RLSGSDELVKLRKFMQGYSVASPTE 755
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 184/437 (42%), Gaps = 17/437 (3%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
GV P R + +L + + A + D ++ E F L+ L + I M
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR------VEPDVMAY 341
+++ +M E RPDV +L+ L +D L V+E+M+ R ++ D + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI-YGSLVESFVAVNKVGAGFDLLKDLV 400
T+I GL GR++E L MK + + A+ Y L++ + K+ +++ +
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
+ ++ N ++ G+C + A F +EG++ + ++ L+ +E
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 461 NFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNIL 517
++M + G P S + + A+ V LKE G+ S+D+ YN+L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDLLAYNML 552
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC---HVDLGEIKQACECHNKIIE 574
+ +K + ++ KPDS +Y+ I H D +++ E ++ E
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME---QMRE 609
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
P++ Y + C +GE+DEA+ L +D + P +Y++ + K +
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 635 KVIGVLNEMMQQGCPPG 651
+ + + EM + P
Sbjct: 670 QALSLKEEMKMKMVRPN 686
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 117/640 (18%), Positives = 247/640 (38%), Gaps = 116/640 (18%)
Query: 129 PSLVAEVLKVQTNPTLSFKFFHWAE------KQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
P + +++ + + +L+ FF + + K++ + A + + + +
Sbjct: 78 PLVFSQITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLL 137
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
+L E+ + P + ++LIR G + VYE++ + + N ++D
Sbjct: 138 RLYEIAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKNSQ---VRNVVVDV 194
Query: 243 LIRTGHLDLALSVYDD----------------------FKEDGLDEERVTFMV------- 273
L+R G +D A V D+ +KE L EE++ ++
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHG 254
Query: 274 ----------LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ LC+ R + ++L + + + + L+ L ++
Sbjct: 255 VSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
+ +M + ++ PDV+ +I L RV+E +F++M+ K R G+++
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK-----RTDDGNVI--- 366
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPD 442
+AD +N LI+GLC + + ++A +L ++ ++E P+
Sbjct: 367 ---------------------KADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSY 502
++ L+ Y A ++E A EV S
Sbjct: 406 AVTYNCLIDGYCRAGKLET----------------------------------AKEVVSR 431
Query: 503 LKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
+KE +V N ++ + + + A+ F ++ +K + +Y I +
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
+++A + K++E C P Y L GLC++ +A+ +V S + Y+
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDL-LAYN 550
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
+ + C N+AEKV +L +M ++G P ++ + +IS K+ E ++ +RE
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 682 KLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFFGLESKL 721
L + Y + + D + K GL SK+
Sbjct: 611 GL--DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 154 KQKGYHHNFASYNAFA--YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG 211
K+ G+ + +YN +C ++NN + + L + M+ +GK P + LI
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC-DKNNAEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHK 595
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVT 270
V + E+MR G+ P V Y ++DA G LD AL ++ D ++ V
Sbjct: 596 DFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ +L+ + G + L + M+ K+ RP+V Y L + L + + L++ +EM
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Query: 331 KDRVEPDVMAYATIITGLS 349
+ EP+ + ++ LS
Sbjct: 715 EQSCEPNQITMEILMERLS 733
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 213/475 (44%), Gaps = 11/475 (2%)
Query: 129 PSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
P L+ VL + L ++FF WA KQ GY H++ + +++ A L E
Sbjct: 97 PGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEE 156
Query: 188 MDSQGKPPSEKQ-FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
M E + F +L+R + A + V ++M K+G++P +++ ++DAL +
Sbjct: 157 MRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEM-PKYGLEPDEYVFGCLLDALCKN 215
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G + A V++D +E R F L+ G C+ G++ E EVL +M+E PD+ +
Sbjct: 216 GSVKEASKVFEDMREKFPPNLRY-FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG-GRVEEGYVLFKEMK 365
T L+ G + + +M+K EP+V Y +I L R++E +F EM+
Sbjct: 275 TNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G D Y +L+ F + G+ +L D+ G Y ++ +FE
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFE 394
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFF 484
+ +L + + G PD L ++ L + ++ +L +ME G P +D
Sbjct: 395 ECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMI 454
Query: 485 SIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI---LMDSLHKVGEMKKALSLFDEING-- 539
+ F + I A F + +G S Y L+++L + +++ A ++ I+
Sbjct: 455 NGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKT 514
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
++ + + +++I I G +K+AC ++EM +P Y L KGL K+
Sbjct: 515 SSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKL 569
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 206/490 (42%), Gaps = 62/490 (12%)
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
PE + + EK + IL HS + E N+ G+ R L R++
Sbjct: 56 PEKHEDEFAGEVEKIYRILRNHHSRVPK-------LELALNESGIDLRPGLIIRVLSRCG 108
Query: 245 RTGHLDLALSVYDDFKEDGLDEERV--TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
G+L ++ + V + ++++ + Q G + ++E + + +L P+
Sbjct: 109 DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE 168
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
+F VL+R + + V +EM K +EPD + ++ L G V+E +F+
Sbjct: 169 LF--VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFE 226
Query: 363 EMKSK------------------GHLI----------------DRAIYGSLVESFVAVNK 388
+M+ K G L+ D ++ +L+ + K
Sbjct: 227 DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK-FEKAHKLFQVTIQEGLEPDFLSVK 447
+ +DL+ D+ G+ ++ Y LI+ LC K ++A ++F + G E D ++
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV--EKKGPI-MALEVFSYLK 504
L+ + + ++ Y +L M K G V+ + I V EKK LE+ +K
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKG--VMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 505 EKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIK 563
+G + + IYN+++ K+GE+K+A+ L++E+ L P ++ I I G +
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLI 464
Query: 564 QACECHNKIIEMSCI--PSIAAYKCLTKGLCKIGEIDEAMMLVRD---CLGNVTSGPMEF 618
+AC +++ P K L L + D+ + + +D C+ N TS
Sbjct: 465 EACNHFKEMVSRGIFSAPQYGTLKSLLNNLVR----DDKLEMAKDVWSCISNKTSSCELN 520
Query: 619 MYSLTV-IHA 627
+ + T+ IHA
Sbjct: 521 VSAWTIWIHA 530
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 158/384 (41%), Gaps = 59/384 (15%)
Query: 358 YVLFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
+ L +EM K+ LI+ ++ L+ F + N V ++L ++ G D ++ L++
Sbjct: 151 WGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLD 210
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA-EAKRMENFYKLLQQMEKLGFP 475
LC ++A K+F+ ++E P+ LL + E K ME
Sbjct: 211 ALCKNGSVKEASKVFE-DMREKFPPNLRYFTSLLYGWCREGKLME--------------- 254
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLF 534
A EV +KE G + ++ L+ G+M A L
Sbjct: 255 --------------------AKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 535 DEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMS---CIPSIAAYKCLTK 589
+++ +P+ Y++ I LC + K+ E +EM C I Y L
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTE----KRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
G CK G ID+ ++ D + P + Y ++ K E+ + ++ +M ++GC
Sbjct: 351 GFCKWGMIDKGYSVLDD-MRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY-------DEFLID---H 699
P ++ + VI CK G ++EA ++++ + L DT V FLI+ H
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 469
Query: 700 MKKKTADLVMSGLKFFGLESKLKS 723
K+ + + S ++ L+S L +
Sbjct: 470 FKEMVSRGIFSAPQYGTLKSLLNN 493
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 140/607 (23%), Positives = 248/607 (40%), Gaps = 89/607 (14%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+KG + + SY+ +++ + A L M +G P+ + +IR G+
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ ++ ++ + G++ FLY ++D + R G+L+ A S+ D ++ G+ +T+ +
Sbjct: 330 EAFVLFNRILS-VGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRV--------- 325
+ GLC AGR+ E EV K DV Y+ L+ + N+D L +
Sbjct: 389 INGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Query: 326 --------------------------WEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
+ M + + PD YAT+I G G++EE
Sbjct: 444 PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALE 503
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD------------ 407
+F E++ K + Y ++++ + ++L +L G D
Sbjct: 504 MFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIH 562
Query: 408 -----------------------LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
LG+ N+ I LC FE A +++ + ++GL F
Sbjct: 563 ANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP 622
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID--DLARFFSIFVEKKGPIMALEVFSY 502
S +L + R + Y L+ + +D D + ++ + AL + S+
Sbjct: 623 S--TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 503 LKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
K +G I YN L++ L + G + +AL LFD + L P +Y I I G
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV-RDCLGNVTSGPMEFMY 620
A + + ++ +P+I Y + G CK+G+ ++AM +V R +G VT P F
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT--PDAFTV 798
Query: 621 SLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
S + CK D E+ + V E + +I G C G +EEAR + LRE
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGL---LRE 855
Query: 681 RKLLTES 687
L++ES
Sbjct: 856 M-LVSES 861
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 132/580 (22%), Positives = 258/580 (44%), Gaps = 82/580 (14%)
Query: 169 AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFG 228
+ + R++ + L + + + G PS F LI + G V E M NK
Sbjct: 106 GFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNV 165
Query: 229 VKP-RVFLYNRIMDALIRTGHLDLALSVYDDFKEDG-LDEERVTFMVLVKGLCQAGRIDE 286
P F+ + ++ + G +LAL ++ + G L VT+ LV LCQ G++DE
Sbjct: 166 NYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDE 225
Query: 287 MLEVLGR-----------------------------------MREKLCRPDVFAYTVLVR 311
+ +++ R M EK DV +Y++L+
Sbjct: 226 VRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILID 285
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
L +GN++ L + +M K+ VEP+++ Y II GL G++EE +VLF + S G +
Sbjct: 286 GLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEV 345
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
D +Y +L++ + F +L D+ G + + YN +I GLC + +A +
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-- 403
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKK 491
+ +G+ D ++ LL Y + + ++ ++ ++ F+E K
Sbjct: 404 ---VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRR------------------FLEAK 442
Query: 492 GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
P+ + + NIL+ + +G +A +L+ + +L PD+ +Y+
Sbjct: 443 IPM---------------DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNV 611
I + G+I++A E N+ + S + + Y + LCK G +D A ++ +
Sbjct: 488 MIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEK- 545
Query: 612 TSGPMEFMYSLTVIHACKSNDAEK-VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEE 670
++ S T++H+ +N +K ++G++ + Q + + I +CK G+ E
Sbjct: 546 -GLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEA 604
Query: 671 ARKVFSNLRERKL-LTESDTIVYDEFLIDHMKKKTADLVM 709
A +V+ +R + L +T TI+ + L+D+++ A L++
Sbjct: 605 AIEVYMIMRRKGLTVTFPSTIL--KTLVDNLRSLDAYLLV 642
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 215/478 (44%), Gaps = 13/478 (2%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ V Y+ ++D L + G+++ AL + ++G++ +T+ +++GLC+ G+++E
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ R+ D F Y L+ + +GNL+ + +M++ ++P ++ Y T+I G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L GRV E + SKG + D Y +L++S++ V + A ++ + + + D
Sbjct: 392 LCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
L + N L++ + + +A L++ + L PD + ++ Y + ++E ++
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 468 QMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGE 526
++ K R +K A EV L EKG Y+ + L+ S+H G
Sbjct: 507 ELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
K L L + N + AIL G + A E + I+ +
Sbjct: 567 DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY-MIMRRKGLTVTFPSTI 625
Query: 587 LTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM-YSLTVIHACKSNDAEKVIGVLNEMMQ 645
L + + +D +++V G T M+ + Y++ + CK K + + +
Sbjct: 626 LKTLVDNLRSLDAYLLVVNA--GETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKK 703
+G + +++I+G+C+ G + EA ++F +L L+ T LID++ K+
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTY---GILIDNLCKE 738
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 245/587 (41%), Gaps = 35/587 (5%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G+ S + F + R Q +DS+ + + + I+ S A L
Sbjct: 19 KSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIV----SWAFLNL 74
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALI------RTGHLDLALSVYDDFKEDGLDEER 268
Y EK N K +F ++D+LI R L + D + G
Sbjct: 75 NRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSS 134
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREK-LCRP-DVFAYTVLVRILVPQGNLDGCLRVW 326
+TF L+ + G +D +EVL M K + P D F + ++ G + L +
Sbjct: 135 LTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFF 194
Query: 327 EEMKKDRV-EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA 385
E V P+++ Y T+++ L G+V+E L + ++ +G D Y + + +
Sbjct: 195 ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF- 253
Query: 386 VNKVGAGFDLL---KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
K GA D L +++V G D+ Y+ LI+GL E+A L I+EG+EP+
Sbjct: 254 --KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFS 501
++ ++ + ++E + L ++ +G V + L + +KG + A +
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 502 YLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
++++G S+ YN +++ L G + +A DE++ + D +YS + ++ +
Sbjct: 372 DMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVS-KGVVGDVITYSTLLDSYIKVQ 426
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMY 620
I E + +E + L K +G EA L R + + P Y
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYR-AMPEMDLTPDTATY 485
Query: 621 SLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVC-SAVISGMCKYGTIEEARKVFSNLR 679
+ + CK+ E+ + + NE+ + VC + +I +CK G ++ A +V L
Sbjct: 486 ATMIKGYCKTGQIEEALEMFNELRKSSVSAA--VCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 680 ERKLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFFGLESKLKSKGC 726
E+ L + T L+ + D + GL +GLE +L S C
Sbjct: 544 EKGLYLDIHT---SRTLLHSIHANGGDKGILGL-VYGLE-QLNSDVC 585
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 119/568 (20%), Positives = 211/568 (37%), Gaps = 125/568 (22%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV 233
+ N +RA L + M+ +G PS + +I AGR V E GV V
Sbjct: 360 KGNLNRAFSMLGD-MEQRGIQPSILTYNTVINGLCMAGR------VSEADEVSKGVVGDV 412
Query: 234 FLYNRIMDALIRTGHLDLALSV-----------------------------------YDD 258
Y+ ++D+ I+ ++D L + Y
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 259 FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN 318
E L + T+ ++KG C+ G+I+E LE+ +R+ V Y ++ L +G
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGM 531
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATI------------ITGLSNG--------------- 351
LD V E+ + + D+ T+ I GL G
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591
Query: 352 --------GRVEEGYVLFKEMKSKGHLID--RAIYGSLVESFVAVNK----VGAGFDLLK 397
G E ++ M+ KG + I +LV++ +++ V AG L
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ D+ Y +I GLC KA L G+ + ++ L+ +
Sbjct: 652 SM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQG 704
Query: 458 RMENFYKLLQQMEKLGFP--------VIDDLARFFSIFVEKKGPIMALE-VFSYLKEKGY 508
+ +L +E +G +ID+L K+G + E + + KG
Sbjct: 705 CLVEALRLFDSLENIGLVPSEVTYGILIDNLC--------KEGLFLDAEKLLDSMVSKGL 756
Query: 509 V-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
V ++ IYN ++D K+G+ + A+ + + PD+F+ S I + G++++A
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
+ + + + L KG C G ++EA L+R E + S +V+
Sbjct: 817 VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLR-----------EMLVSESVVKL 865
Query: 628 CKSNDA-----EKVIGVLNEMMQQGCPP 650
DA E + G L E+ +QG P
Sbjct: 866 INRVDAELAESESIRGFLVELCEQGRVP 893
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 13/260 (5%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
Y I++ L + G L AL++ K G+ +T+ L+ GLCQ G + E L + +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
P Y +L+ L +G ++ + M + P+++ Y +I+ G G+ E
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 356 EGYVLFKEMKSKGHLI-DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
+ + K G + D S+++ + + + + AD + L
Sbjct: 778 DAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFL 836
Query: 415 IEGLCNLNKFEKAHKLF-QVTIQEGLE----------PDFLSVKPLLVLYAEAKRMENFY 463
I+G C + E+A L ++ + E + + S++ LV E R+
Sbjct: 837 IKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAI 896
Query: 464 KLLQQMEKLGFPVIDDLARF 483
K+L ++ +P +L +
Sbjct: 897 KILDEISSTIYPSGKNLGSY 916
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 199/488 (40%), Gaps = 48/488 (9%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
V+++MR+ + F YNR + L+R +LA ++Y D K G T+ + G
Sbjct: 30 QVFDEMRHS-SYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISG 88
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
LC+ + D + +L M PD++A+ V + +L + + ++ + M + EPD
Sbjct: 89 LCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPD 148
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V++Y +I GL G+V + ++ M G D +LV KV ++++
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVA 208
Query: 398 DLVSSGYRADLG--IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
+ + S R L +YN LI G C + EKA L + G EPD ++ LL Y +
Sbjct: 209 EEIKSA-RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 456 ---AKRME-----------------------------------NFYKLLQQMEKLGFPVI 477
KR E NF ++++ME GF +
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF--MVKEMEPRGFCDV 325
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDE 536
+ F A +F +++KG V +V Y L+ + + G A L D+
Sbjct: 326 VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 537 INGANLKPDSFSYSIAILCHV-DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
+ L PD Y+ IL H+ G + +A N +IE P +Y L GLC+ G
Sbjct: 386 MTELGLSPDRIFYT-TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 596 EIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVC 655
+ EA+ L D G P E + + + V ++MM +G V
Sbjct: 445 RVTEAIKLFEDMKGK-ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 656 SAVISGMC 663
+I C
Sbjct: 504 DTLIKASC 511
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 194/457 (42%), Gaps = 47/457 (10%)
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
R+ + + L ++G ID ++V MR R F Y + +LV + + ++
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
+MK Y+ I+GL + + L +M++ G + D + ++ N
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
KVG +V G D+ Y LI GL K A +++ I+ G+ PD +
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 448 PLLVLYAEAKRMENFYKLLQQ-----MEKLGFPVIDDLARFFSIFVEKKGPIMALEVF-S 501
L+V A++++ Y+++ + KL V + L F K G I E S
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC----KAGRIEKAEALKS 244
Query: 502 YLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
Y+ + G + YN+L++ + +K+A + E+ + ++ D++SY+ + H +
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 561 -------------EIKQACEC--HNKIIEMSC--------------------IPSIAAYK 585
E + C+ ++ +IE C + ++ Y
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
L K + G A L+ D + + P Y+ + H CKS + +K GV N+M++
Sbjct: 365 SLIKAFLREGNSSVAKKLL-DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
P + +++ISG+C+ G + EA K+F +++ ++
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 157/392 (40%), Gaps = 42/392 (10%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G+ + ++N + + R N A Q M +G+ P + ILI AG+
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS-VYDDFKEDGLDEERVTFMVLV 275
++ M + GV P ++ L +DLA V ++ K + V + L+
Sbjct: 169 VEIWNAMI-RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALI 227
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV- 334
G C+AGRI++ + M + C PD+ Y VL+ L V EM + +
Sbjct: 228 SGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQ 287
Query: 335 ------------------------------EP----DVMAYATIITGLSNGGRVEEGYVL 360
EP DV++Y+T+I + Y L
Sbjct: 288 LDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F+EM+ KG +++ Y SL+++F+ LL + G D Y +++ LC
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME-KLGFPVIDD 479
+KA+ +F I+ + PD +S L+ + R+ KL + M+ K P D+
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP--DE 465
Query: 480 LARFFSI--FVEKKGPIMALEVFSYLKEKGYV 509
L F I + K A +V+ + +KG+
Sbjct: 466 LTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 9/270 (3%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G + +YN NN + A+ + M G + L++ H +
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 217 YHVYEKMRNKFGVKPRVFL----YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
Y+ K ++PR F Y+ +++ R + A ++++ ++ G+ VT+
Sbjct: 310 YNFMVK-----EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
L+K + G ++L +M E PD YT ++ L GN+D V+ +M +
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ PD ++Y ++I+GL GRV E LF++MK K D + ++ + K+ A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
+ + ++ G+ D + + LI+ C+++
Sbjct: 485 YKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 133/609 (21%), Positives = 244/609 (40%), Gaps = 84/609 (13%)
Query: 170 YCMN--RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKF 227
YC R+ + A D P L + +G PS+ IL+ A + ++ +
Sbjct: 198 YCTQFKRDGCYLALDVFPVLAN-KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-- 254
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
GV P V+L+ ++A + G ++ A+ ++ +E G+ VTF ++ GL GR DE
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+M E+ P + Y++LV+ L + V +EM K P+V+ Y +I
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
G + + + M SKG + + Y +L++ + + LLK+++S G+ +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 408 LGIYNN-----------------------------------LIEGLCNLNKFEKAHKLFQ 432
G + + LI GLC K KA +L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG 492
+ +G D + LL EA +++ +++ Q E LG + D + ++ G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI--QKEILGRGCVMDRVSYNTLISGCCG 552
Query: 493 PIMALEVFSYLKE--------KGYV-------------------------------SVDI 513
E F +L E Y V
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
Y++++D K ++ FDE+ N++P++ Y+ I + G + A E +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
P+ A Y L KG+ I ++EA +L + + P F Y+ + K
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEE-MRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYD 693
KV +L EM + P + + +I G + G + EA ++ + +RE+ ++ D+I Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV--PDSITYK 789
Query: 694 EFLIDHMKK 702
EF+ ++K+
Sbjct: 790 EFIYGYLKQ 798
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 228/529 (43%), Gaps = 18/529 (3%)
Query: 171 CMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY---HVYEKMRNKF 227
C R++ AD + L + K ++LI ++ + Y V+ + NK
Sbjct: 162 CGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANK- 220
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ P N ++ +L+R +D + G+ + F + C+ G+++E
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+++ +M E P+V + ++ L G D E+M + +EP ++ Y+ ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L+ R+ + Y + KEM KG + +Y +L++SF+ + ++ +VS G
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL---EPDFLSVKPLL---VLYAEAKRMEN 461
YN LI+G C + + A +L + + G + F SV LL +++ A R
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDS 520
LL+ M P L S + ALE++ KG+V N L+
Sbjct: 460 -EMLLRNMS----PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L + G++ +A + EI G D SY+ I ++ +A +++++ P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
Y L GL + +++EA+ DC N P + YS+ + CK+ E+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+EMM + P VV + +I C+ G + A ++ +++ + + S T
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/532 (23%), Positives = 213/532 (40%), Gaps = 82/532 (15%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ K F E + G N ++N + + A E M +G P+ + IL+
Sbjct: 279 AVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
+ + A R Y V ++M K G P V +YN ++D+ I G L+ A+ + D GL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 265 DEERVTFMVLVKGLCQAGRID-------EMLEV--------------------------- 290
T+ L+KG C+ G+ D EML +
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 291 -LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+G M + P T L+ L G L +W + D ++ GL
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
G+++E + + KE+ +G ++DR Y +L+ K+ F L ++V G + D
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN----FYKL 465
Y+ LI GL N+NK E+A + + + G+ PD + ++ +A+R E F ++
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 466 LQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKG-------YVS------- 510
+ + + V + L R + + G + MALE+ +K KG Y S
Sbjct: 637 MSKNVQPNTVVYNHLIRAYC----RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 511 ----------------------VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
V Y L+D K+G+M K L E++ N+ P+ +
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
Y++ I + G + +A N++ E +P YK G K G + EA
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 176 NHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFL 235
N A Q + G P + ++I A R +++M +K V+P +
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVV 647
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN ++ A R+G L +AL + +D K G+ T+ L+KG+ R++E + MR
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 296 EKLCRPDVF-----------------------------------AYTVLVRILVPQGNLD 320
+ P+VF YTV++ GN+
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
R+ EM++ + PD + Y I G G V E +
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 133/609 (21%), Positives = 244/609 (40%), Gaps = 84/609 (13%)
Query: 170 YCMN--RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKF 227
YC R+ + A D P L + +G PS+ IL+ A + ++ +
Sbjct: 198 YCTQFKRDGCYLALDVFPVLAN-KGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-- 254
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
GV P V+L+ ++A + G ++ A+ ++ +E G+ VTF ++ GL GR DE
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+M E+ P + Y++LV+ L + V +EM K P+V+ Y +I
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
G + + + M SKG + + Y +L++ + + LLK+++S G+ +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 408 LGIYNN-----------------------------------LIEGLCNLNKFEKAHKLFQ 432
G + + LI GLC K KA +L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG 492
+ +G D + LL EA +++ +++ Q E LG + D + ++ G
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI--QKEILGRGCVMDRVSYNTLISGCCG 552
Query: 493 PIMALEVFSYLKE--------KGYV-------------------------------SVDI 513
E F +L E Y V
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
Y++++D K ++ FDE+ N++P++ Y+ I + G + A E +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
P+ A Y L KG+ I ++EA +L + + P F Y+ + K
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEE-MRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYD 693
KV +L EM + P + + +I G + G + EA ++ + +RE+ ++ D+I Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV--PDSITYK 789
Query: 694 EFLIDHMKK 702
EF+ ++K+
Sbjct: 790 EFIYGYLKQ 798
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 228/529 (43%), Gaps = 18/529 (3%)
Query: 171 CMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY---HVYEKMRNKF 227
C R++ AD + L + K ++LI ++ + Y V+ + NK
Sbjct: 162 CGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANK- 220
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ P N ++ +L+R +D + G+ + F + C+ G+++E
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+++ +M E P+V + ++ L G D E+M + +EP ++ Y+ ++ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L+ R+ + Y + KEM KG + +Y +L++SF+ + ++ +VS G
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL---EPDFLSVKPLL---VLYAEAKRMEN 461
YN LI+G C + + A +L + + G + F SV LL +++ A R
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDS 520
LL+ M P L S + ALE++ KG+V N L+
Sbjct: 460 -EMLLRNMS----PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L + G++ +A + EI G D SY+ I ++ +A +++++ P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
Y L GL + +++EA+ DC N P + YS+ + CK+ E+
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+EMM + P VV + +I C+ G + A ++ +++ + + S T
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 125/532 (23%), Positives = 213/532 (40%), Gaps = 82/532 (15%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ K F E + G N ++N + + A E M +G P+ + IL+
Sbjct: 279 AVKLFSKME-EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
+ + A R Y V ++M K G P V +YN ++D+ I G L+ A+ + D GL
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 265 DEERVTFMVLVKGLCQAGRID-------EMLEV--------------------------- 290
T+ L+KG C+ G+ D EML +
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 291 -LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
+G M + P T L+ L G L +W + D ++ GL
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 516
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
G+++E + + KE+ +G ++DR Y +L+ K+ F L ++V G + D
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN----FYKL 465
Y+ LI GL N+NK E+A + + + G+ PD + ++ +A+R E F ++
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 466 LQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKG-------YVS------- 510
+ + + V + L R + + G + MALE+ +K KG Y S
Sbjct: 637 MSKNVQPNTVVYNHLIRAYC----RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 511 ----------------------VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
V Y L+D K+G+M K L E++ N+ P+ +
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 752
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
Y++ I + G + +A N++ E +P YK G K G + EA
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 84/218 (38%), Gaps = 36/218 (16%)
Query: 176 NHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFL 235
N A Q + G P + ++I A R +++M +K V+P +
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVV 647
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN ++ A R+G L +AL + +D K G+ T+ L+KG+ R++E + MR
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 296 EKLCRPDVF-----------------------------------AYTVLVRILVPQGNLD 320
+ P+VF YTV++ GN+
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
R+ EM++ + PD + Y I G G V E +
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 178/380 (46%), Gaps = 7/380 (1%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G P + N +++ + A+++ D E G + VTF LV GL Q +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E + ++ RM K C+PD+ Y ++ L +G D L + +M+K ++E DV+ Y TII
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL +++ + LF +M++KG D Y L+ + LL D++
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ-EGLEPDFLSVKPLLVLYAEAKRMENFYK 464
DL +N LI+ K +A KL+ ++ + PD ++ L+ + + KR+E +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 465 LLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDS 520
+ ++M + G ++ + + ++ F + + A VF + G + + YNIL+D
Sbjct: 378 VFREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L G ++ AL +F+ + ++K D +Y+ I G+++ + + P+
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 581 IAAYKCLTKGLCKIGEIDEA 600
+ Y + G C+ G +EA
Sbjct: 496 VVTYTTMMSGFCRKGLKEEA 515
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 202/500 (40%), Gaps = 44/500 (8%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS +F L+ + + V + E+M+N G+ ++ Y+ ++ R L LAL+
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN-LGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ + G VT L+ G C RI E + ++ +M E +PD +T LV L
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+ + E M +PD++ Y +I GL G + L +M+ D
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
IY ++++ + FDL + + G + D+ YN LI LCN ++ A +L
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI 494
+++ + PD + L+ + + ++ KL +M K
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK----------------------- 348
Query: 495 MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
+ + V YN L+ K +++ + +F E++ L ++ +Y+ I
Sbjct: 349 ---------SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 555 CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV-----RDCLG 609
+ A +++ P I Y L GLC G ++ A+++ RD
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 610 NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIE 669
++ + Y+ + CK+ E + + +G P V + ++SG C+ G E
Sbjct: 460 DIVT------YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 670 EARKVFSNLRERKLLTESDT 689
EA +F ++E L S T
Sbjct: 514 EADALFVEMKEDGPLPNSGT 533
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 190/451 (42%), Gaps = 49/451 (10%)
Query: 249 LDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
LD A+ ++ D + V F L+ + + + D ++ + +M+ +++ Y++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
+ + L L + +M K P ++ +++ G +G R+ E L +M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
+ D + +LV NK L++ +V G + DL Y +I GLC + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV 488
L + +E D + ++ + K M++ + L +ME G
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK------------- 282
Query: 489 EKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
P +VF+ YN L+ L G A L ++ N+ PD
Sbjct: 283 ----P----DVFT------------YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMS-CIPSIAAYKCLTKGLCKIGEIDEAM-----M 602
++ I V G++ +A + ++++++ C P + AY L KG CK ++E M M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 603 LVRDCLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISG 661
R +GN + Y+ T+IH ++ D + V +M+ G P + + ++ G
Sbjct: 383 SQRGLVGNTVT------YT-TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 662 MCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+C G +E A VF +++R + + D + Y
Sbjct: 436 LCNNGNVETALVVFEYMQKRDM--KLDIVTY 464
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 1/273 (0%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+F F+ E KG + +YN C+ A +L M + P F LI
Sbjct: 269 AFDLFNKME-TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
G+ + +Y++M P V YN ++ + ++ + V+ + + GL
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
VT+ L+ G QA D V +M PD+ Y +L+ L GN++ L
Sbjct: 388 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
V+E M+K ++ D++ Y T+I L G+VE+G+ LF + KG + Y +++ F
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
L ++ G + G YN LI
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 134/306 (43%), Gaps = 25/306 (8%)
Query: 116 PVVTELSKLRRVTPS--LVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMN 173
P+++ L R + + L++++L+ NP L F +NA
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVF------------------FNALIDAFV 331
Query: 174 RNNHHRAADQL-PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPR 232
+ A++L E++ S+ P + LI+ R V+ +M + G+
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGN 390
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
Y ++ + D A V+ DG+ + +T+ +L+ GLC G ++ L V
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
M+++ + D+ YT ++ L G ++ ++ + V+P+V+ Y T+++G G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD---LG 409
EE LF EMK G L + Y +L+ + + A +L+K++ S G+ D G
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFG 570
Query: 410 IYNNLI 415
+ N++
Sbjct: 571 LVTNML 576
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
Q+G N +Y + + A + + M S G P + IL+ + G
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
V+E M+ + +K + Y +++AL + G ++ ++ G+ VT+ +
Sbjct: 444 TALVVFEYMQKR-DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C+ G +E + M+E P+ Y L+R + G+ + +EM+
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 335 EPDVMAYATIITGLSNGGRVEEGYV 359
D + ++T + + GR+++ ++
Sbjct: 563 AGDASTFG-LVTNMLHDGRLDKSFL 586
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 163/356 (45%), Gaps = 37/356 (10%)
Query: 200 FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG-HLDLALSVYDD 258
F LI + +G V+ M+ ++G++P + YN ++DA + G +D+
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 259 FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN 318
+ +G+ +R+TF L+ + G + + M + DVF+Y L+ + G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
+D + +M R+ P+V++Y+T+I G + GR +E LF EM+ G +DR Y +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
L+ + V + D+L+++ S G + D+ YN L+ G K+++ K+F +E
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 439 LEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE 498
+ P+ L+ L+ Y++ YK A+E
Sbjct: 510 VLPNLLTYSTLIDGYSKG----GLYK------------------------------EAME 535
Query: 499 VFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+F K G V +Y+ L+D+L K G + A+SL DE+ + P+ +Y+ I
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 37/301 (12%)
Query: 154 KQKGYHHNFASYNA-FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR 212
K+ G N +YNA C + + + M G P F L+ + S G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
+++++M N+ ++ VF YN ++DA+ + G +DLA + + V++
Sbjct: 355 WEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 273 VLVKGLCQAGRIDEMLEVLGRMR-------------------------EKL--------- 298
++ G +AGR DE L + G MR E L
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 299 -CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
+ DV Y L+ QG D +V+ EMK++ V P+++ Y+T+I G S GG +E
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+F+E KS G D +Y +L+++ VG+ L+ ++ G ++ YN++I+
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 418 L 418
Sbjct: 594 F 594
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 153/370 (41%), Gaps = 35/370 (9%)
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG-RVEEGYVLF 361
V+A++ L+ G + + V+ MK+ + P+++ Y +I GG ++ F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
EM+ G DR + SL+ A +L ++ + D+ YN L++ +C
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
+ + A ++ + + P+ +S ++ +A+A R + L +M LG
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-------- 439
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGAN 541
+AL+ SY N L+ KVG ++AL + E+
Sbjct: 440 -------------IALDRVSY------------NTLLSIYTKVGRSEEALDILREMASVG 474
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
+K D +Y+ + + G+ + + ++ +P++ Y L G K G EAM
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 602 MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISG 661
+ R+ + +YS + CK+ + +++EM ++G P V +++I
Sbjct: 535 EIFREFKSAGLRADV-VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 662 MCKYGTIEEA 671
+ T++ +
Sbjct: 594 FGRSATMDRS 603
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 12/233 (5%)
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKK 529
KL +I L R+ + + K+ +F GY +V ++ L+ + + G ++
Sbjct: 234 KLASAMISTLGRYGKVTIAKR-------IFETAFAGGYGNTVYAFSALISAYGRSGLHEE 286
Query: 530 ALSLFDEINGANLKPDSFSYSIAI-LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
A+S+F+ + L+P+ +Y+ I C E KQ + +++ P + L
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 589 KGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGC 648
+C G + EA + D + N F Y+ + CK + +L +M +
Sbjct: 347 -AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 649 PPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMK 701
P V S VI G K G +EA +F + R L D + Y+ L + K
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEM--RYLGIALDRVSYNTLLSIYTK 456
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 185/407 (45%), Gaps = 34/407 (8%)
Query: 199 QFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDD 258
F ILI+ +AG + + + ++ +FG P V +Y ++D + G ++ A ++ +
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIEL-TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 259 FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN 318
+ GL T+ VL+ GL + G + E+ +M+E P+++ Y ++ L G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
+V++EM++ V +++ Y T+I GL ++ E + +MKS G + Y +
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
L++ F V K+G L +DL S G L YN L+ G C A K+ + + G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 439 LEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE 498
++P ++ L+ +A + ME +L ME+LG ++ D
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG--LVPD------------------- 442
Query: 499 VFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVD 558
V Y++L+ G+M +A LF + N +P+ Y+ IL +
Sbjct: 443 ------------VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 559 LGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
G +A + ++ E P++A+Y+ + + LCK + EA LV
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 213/482 (44%), Gaps = 7/482 (1%)
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAGR-GLRVYHVYEKMRNKFGVKPRVFLYNR 238
++ L L +S+ + +E++I + + L + + E + N G P +N
Sbjct: 77 SSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDN--GFVPGSNCFNY 134
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++ ++ + + S +++ K + + +F +L+KG C+AG I++ ++L + E
Sbjct: 135 LLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFG 193
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
P+V YT L+ +G ++ ++ EM K + + Y +I GL G ++G+
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
++++M+ G + Y ++ + F + ++ G ++ YN LI GL
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVI 477
C K +A+K+ +G+ P+ ++ L+ + ++ L + ++ G P +
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDE 536
S F K A ++ ++E+G + Y IL+D+ + M+KA+ L
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 537 INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGE 596
+ L PD +YS+ I G++ +A ++E +C P+ Y + G CK G
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
A+ L+++ + P Y + CK +++ ++ +M+ G P + S
Sbjct: 494 SYRALKLLKE-MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 657 AV 658
+
Sbjct: 553 LI 554
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K +G + +YN R A ++ + M+ +G PS+ + ILI
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI--------- 415
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
D R+ +++ A+ + +E GL + T+ V
Sbjct: 416 ---------------------------DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G C G+++E + M EK C P+ Y ++ +G+ L++ +EM++
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG--------HLIDRAIYGSLVES 382
+ P+V +Y +I L + +E L ++M G LI RA S V S
Sbjct: 509 LAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVSS 565
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 38/399 (9%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G H+ S+ +C R + A L M G PS L+ R
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ + M + FG P V +YN +++ L + L+ AL V+ ++ G+ + VT+ L+
Sbjct: 169 VSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GL +GR + +L M ++ P+V +T L+ V +GNL +++EM + V P
Sbjct: 228 GLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP 287
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+V Y ++I G G + + +F M SKG D Y +L+ F +V G L
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
++ G D YN LI G C K A K+F + G+ PD ++ LL
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--Y 514
++E K L +E L +K + VDI Y
Sbjct: 408 GKIE---KALVMVEDL--------------------------------QKSEMDVDIITY 432
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
NI++ L + ++K+A LF + +KPD+ +Y I
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 187/417 (44%), Gaps = 47/417 (11%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV--------------- 275
P + + R++ + + D+ + +Y + G+ + +F +L+
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 276 --------------------KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVP 315
G CQ R E + ++ M P+V Y ++ L
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 316 QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI 375
+L+ L V+ M+K + D + Y T+I+GLSN GR + L ++M + +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
+ +L+++FV + +L K+++ ++ YN+LI G C A +F + +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKG 492
+G PD ++ L+ + ++KR+E+ KL +M G ++ D + ++ + +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG--LVGDAFTYNTLIHGYCQAGK 374
Query: 493 PIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
+A +VF+ + + G VS DI YNIL+D L G+++KAL + +++ + + D +Y+
Sbjct: 375 LNVAQKVFNRMVDCG-VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 551 IAI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
I I LC D ++K+A + P AY + GLC+ G EA L R
Sbjct: 434 IIIQGLCRTD--KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 196/447 (43%), Gaps = 15/447 (3%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V F ++ + + + D ++ + +M D++++T+L+ L L + +
Sbjct: 80 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 139
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M K P ++ +++ G G R +E L M G + + IY +++
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ ++ + G RAD YN LI GL N ++ A +L + ++ ++P+ +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 449 LLVLYAEAKRM---ENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE 505
L+ + + + N YK + + + P + + F A +F +
Sbjct: 260 LIDTFVKEGNLLEARNLYK--EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 506 KG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
KG + V YN L+ K ++ + LF E+ L D+F+Y+ I + G++
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 565 ACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPME---FMYS 621
A + N++++ P I Y L LC G+I++A+++V D + M+ Y+
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED----LQKSEMDVDIITYN 433
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
+ + C+++ ++ + + ++G P + +ISG+C+ G EA K+ ++E
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Query: 682 KLLTESDTIVYDEFLIDHMKKKTADLV 708
+ +YDE L DH +A+L+
Sbjct: 494 GFMPSER--IYDETLRDHYTSLSAELI 518
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
++++ M +K G P V YN ++ ++ ++ + ++ + GL + T+ L+ G
Sbjct: 310 YMFDLMVSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
CQAG+++ +V RM + PD+ Y +L+ L G ++ L + E+++K ++ D
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
++ Y II GL +++E + LF+ + KG D Y +++
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 189/451 (41%), Gaps = 35/451 (7%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G H+ + N C +++ A M G P F LI R
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ +M + G+KP V +Y I+D+L + GH++ ALS++D + G+ + V + LV
Sbjct: 162 MSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
GLC +GR + +L M ++ +PDV + L+ V +G ++ EM + + P
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
++ Y ++I G G V+E +F M++KG D Y SL+ F KV +
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
++ G + Y LI+G + K A ++F + G+ P+ + LL
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--Y 514
+++ + + M+K +E V+ +I Y
Sbjct: 401 GKVKKALMIFEDMQK--------------------------------REMDGVAPNIWTY 428
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE 574
N+L+ L G+++KAL +F+++ + +Y+I I G++K A +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
P++ Y + GL + G EA +L R
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 203/455 (44%), Gaps = 6/455 (1%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + + ++++ + + D+ +++ D + G+ + T +L+ CQ+ +
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LG+M + PD+ +T L+ ++ + + +M + ++PDV+ Y TII L
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G V LF +M++ G D +Y SLV + LL+ + + D+
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
+N LI+ KF A +L+ I+ + P+ + L+ + ++ ++ ME
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 471 KLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMK 528
G FP + + F + K A+++F + +KG I Y L+ +VG+
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII--EMSCI-PSIAAYK 585
A +F + + P+ +Y++ + C G++K+A + EM + P+I Y
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
L GLC G++++A+M+ D + Y++ + CK+ + + + +
Sbjct: 430 VLLHGLCYNGKLEKALMVFED-MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+G P V + +ISG+ + G EA +F ++E
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 143/338 (42%), Gaps = 17/338 (5%)
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+ E LF M L + L+ + K +L L G DL N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
L+ C ++ A ++ G EPD ++ L+ + RME ++ QM ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 473 GFPVIDDLARFFSIF--VEKKGPI-MALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMK 528
G + D+ + +I + K G + AL +F ++ G V +Y L++ L G +
Sbjct: 172 G--IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
A SL + +KPD +++ I V G+ A E +N++I MS P+I Y L
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 589 KGLCKIGEIDEA-----MMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
G C G +DEA +M + C +V + Y+ + CK + + + EM
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVA------YTSLINGFCKCKKVDDAMKIFYEM 343
Query: 644 MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
Q+G + + +I G + G A++VFS++ R
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G P V Y +++ + +D A+ ++ + + GL +T+ L++G Q G+ +
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK---DRVEPDVMAYATI 344
EV M + P++ Y VL+ L G + L ++E+M+K D V P++ Y +
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
+ GL G++E+ ++F++M+ + I Y +++ KV +L L S G
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE 440
+ ++ Y +I GL +AH LF+ ++G+
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 91/183 (49%), Gaps = 2/183 (1%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
QKG N +Y + A ++ M S+G PP+ + + +L+ G+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 215 RVYHVYEKM--RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
+ ++E M R GV P ++ YN ++ L G L+ AL V++D ++ +D +T+
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
++++G+C+AG++ + + + K +P+V YT ++ L +G ++ +MK+D
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 333 RVE 335
V
Sbjct: 525 GVS 527
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 195/413 (47%), Gaps = 13/413 (3%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS F L+ + + R V ++E+M+ G+ P + N +M + + A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ G + + VTF L+ G C RI++ + + ++ +P+V YT L+R L
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+L+ + ++ +M + P+V+ Y ++TGL GR + L ++M + +
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
+ +L+++FV V K+ +L ++ D+ Y +LI GLC ++A ++F +
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG-- 492
+ G P+ + L+ + ++KR+E+ K+ +M + G +A + V +G
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-----VANTITYTVLIQGYC 374
Query: 493 ----PIMALEVFSYLKE-KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
P +A EVF+ + + + YN+L+D L G+++KAL +F+ + + +
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
+Y+I I LG+++ A + + P++ Y + G C+ G I EA
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 37/360 (10%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G KP V Y ++ L + HL+ A+ +++ +G VT+ LV GLC+ GR +
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+L M ++ P+V +T L+ V G L ++ M + V PDV Y ++I G
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G ++E +F M+ G + IY +L+ F +V G + ++ G A+
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL-VLYAEAKRMENFYKLL 466
Y LI+G C + + + A ++F PD + LL L K
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK--------- 413
Query: 467 QQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVG 525
VEK AL +F Y++++ +++ Y I++ + K+G
Sbjct: 414 ---------------------VEK-----ALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+++ A LF + +KP+ +Y+ I G I +A K+ E +P+ + YK
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 38/322 (11%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR-GLR 215
G+ N +Y C+ +N H A +L M + G P+ + L+ + GR G
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLD---------LALSVYDDFKEDG--- 263
+ + + M+ + ++P V + ++DA ++ G L + +SVY D G
Sbjct: 243 AWLLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 264 --------LDEER---------------VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
LDE R V + L+ G C++ R+++ +++ M +K
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
+ YTVL++ G D V+ +M R PD+ Y ++ GL G+VE+ ++
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F+ M+ + I+ Y +++ + KV FDL L S G + ++ Y +I G C
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 421 LNKFEKAHKLFQVTIQEGLEPD 442
+A LF+ ++G P+
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPN 502
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 190/459 (41%), Gaps = 44/459 (9%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + + R++ + + D+ +S+++ + G+ T +++ +C + +
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
LG+M + PD+ +T L+ ++ + +++++ +P+V+ Y T+I L
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
+ LF +M + G + Y +LV + + G LL+D++ ++
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
+ LI+ + K +A +L+ V IQ + PD + Y Y LL
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT-------YGSLINGLCMYGLL---- 309
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKA 530
D AR +E+ G Y + IY L+ K ++
Sbjct: 310 --------DEARQMFYLMERNG--------------CYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
+ +F E++ + ++ +Y++ I + +G A E N++ P I Y L G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 591 LCKIGEIDEAMMLV-----RDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
LC G++++A+M+ R+ N+ + Y++ + CK E + +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVT------YTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
+G P + + +ISG C+ G I EA +F ++E L
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 145/326 (44%), Gaps = 5/326 (1%)
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
LF M L + L+ +N+ L + + G L N ++ +C
Sbjct: 70 LFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVC 129
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVID 478
++ +A ++ G EPD ++ LL Y R+E+ L Q+ +GF P +
Sbjct: 130 LSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVV 189
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEI 537
+ + A+E+F+ + G +V YN L+ L ++G A L ++
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
++P+ +++ I V +G++ +A E +N +I+MS P + Y L GLC G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 598 DEAMMLVRDCLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
DEA + N P E +Y+ T+IH CKS E + + EM Q+G + +
Sbjct: 310 DEARQMFYLMERN-GCYPNEVIYT-TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 657 AVISGMCKYGTIEEARKVFSNLRERK 682
+I G C G + A++VF+ + R+
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRR 393
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 9/304 (2%)
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
L GL NL +F A LF + P + LL + A+ R + L +QM+ LG
Sbjct: 55 LRNGLHNL-QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 474 FP-VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKAL 531
P ++ P A + + G+ + + L++ ++ A+
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
+LFD+I G KP+ +Y+ I C + A E N++ P++ Y L GL
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 592 CKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPG 651
C+IG +A L+RD + P ++ + K + + N M+Q P
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIE-PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 652 NVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSG 711
++I+G+C YG ++EAR++F L ER ++ ++Y + K K + G
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFY-LMERNGCYPNE-VIYTTLIHGFCKSKRVE---DG 347
Query: 712 LKFF 715
+K F
Sbjct: 348 MKIF 351
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 209/477 (43%), Gaps = 39/477 (8%)
Query: 210 AGRG--LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEE 267
AGRG R +++ M+ + KP +Y ++ L R G LD L V+D+ G+
Sbjct: 116 AGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRS 175
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG-NLDGCLRVW 326
++ L+ + GR + LE+L RM+ + P + Y ++ G + +G L ++
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLF 235
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
EM+ + ++PD++ Y T+++ + G +E ++F+ M G + D Y LVE+F +
Sbjct: 236 AEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKL 295
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
++ DLL ++ S G D+ YN L+E ++A +F G P+ +
Sbjct: 296 RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEK 506
LL L+ ++ R ++ +L +M+ P A
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKS-----------------SNTDPDAA---------- 388
Query: 507 GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
YNIL++ + G K+ ++LF ++ N++PD +Y I G + A
Sbjct: 389 ------TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP-MEFMYSLTVI 625
+ + +PS AY + + + +EA++ + + V S P +E +SL
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF-NTMHEVGSNPSIETFHSLLYS 501
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
A + ++ +L+ ++ G P +A I + G EEA K + ++ + +
Sbjct: 502 FA-RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/539 (21%), Positives = 222/539 (41%), Gaps = 12/539 (2%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+G + SY A RN + + +L + M ++ PS + +I + G
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDW 228
Query: 215 R-VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ ++ +MR++ G++P + YN ++ A G D A V+ + G+ + T+
Sbjct: 229 EGLLGLFAEMRHE-GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LV+ + R++++ ++LG M PD+ +Y VL+ G++ + V+ +M+
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
P+ Y+ ++ GR ++ LF EMKS D A Y L+E F
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
L D+V D+ Y +I E A K+ Q + P + ++ +
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALE-VFSYLKEKGYV-S 510
+A E M ++G P I+ F + G + E + S L + G +
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA-RGGLVKESEAILSRLVDSGIPRN 526
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
D +N +++ + G+ ++A+ + ++ + PD + A+L + EC
Sbjct: 527 RDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLE-AVLSVYSFARLVD--ECRE 583
Query: 571 KIIEMSC---IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
+ EM +PSI Y + K D+ L+ + L N S + + +
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDY 643
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
++ + V VL+++ +GC G +A++ + G E A +V + +R L E
Sbjct: 644 DDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 161/408 (39%), Gaps = 40/408 (9%)
Query: 178 HRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYN 237
+ D L E M S G P + +L+ ++ +G V+ +M+ G P Y+
Sbjct: 299 EKVCDLLGE-MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYS 356
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+++ ++G D ++ + K D + T+ +L++ + G E++ + M E+
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
PD+ Y ++ G + ++ + M + + P AY +I EE
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
V F M G + SL+ SF V +L LV SG + +N IE
Sbjct: 477 LVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEA 536
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG-FPV 476
KFE+A K + + +PD +++ +L +Y+ A+ ++ + ++M+ P
Sbjct: 537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPS 596
Query: 477 I----------------DDLARFFSIFVEKK--------GPIMA--------LEVFSYL- 503
I DD+ + + G ++ ++ Y+
Sbjct: 597 IMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVL 656
Query: 504 ----KEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
E + + YN L+D+L +G+ ++A + +E L P+ F
Sbjct: 657 DKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELF 704
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 120/300 (40%), Gaps = 3/300 (1%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ +Y + + H A ++ + M + PS K + +I A +
Sbjct: 421 DMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
M ++ G P + ++ ++ + R G + + ++ + G+ R TF ++ Q
Sbjct: 481 NTM-HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQ 539
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G+ +E ++ M + C PD ++ + +D C +EEMK + P +M
Sbjct: 540 GGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC 599
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD-LLKDL 399
Y ++ R ++ L +EM S + G +++ + + +L L
Sbjct: 600 YCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKL 659
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
S G + YN L++ L L + E+A ++ + GL P+ K LV + RM
Sbjct: 660 NSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFR-KNKLVWSVDVHRM 718
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 125/468 (26%), Positives = 209/468 (44%), Gaps = 25/468 (5%)
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM 294
L N +++L + +L+ A ++ D G+ + +T+ L+KG + IDE V RM
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
RE PDV Y L+ L+ L++++EM + PD+ +Y T+++ GR
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 355 EEGY-VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
E + +L +++ G + Y L+++ +L K L S + +L YN
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNI 193
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
LI GLC + + + + G P+ ++ +L +Y + KR+E +L +M+K G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 474 FPVIDDLAR--FFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKK 529
+ D A S ++ A E L G S DI YN L++ K G +
Sbjct: 254 Y-TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
L +EI LKPD ++++I + +++G A + I EM PS+ CL
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLID 372
Query: 590 GLCKIGEIDEAMML-----VRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
GLCK G +D AM L VRD EF Y+ V + CK +L
Sbjct: 373 GLCKAGHVDRAMRLFASMEVRD----------EFTYTSVVHNLCKDGRLVCASKLLLSCY 422
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+G + AV+SG+ + + + ARK + K E +T++Y
Sbjct: 423 NKGMKIPSSARRAVLSGIRETVSYQAARKTHIKI---KAAIECNTLMY 467
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 145/318 (45%), Gaps = 2/318 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++ G + +YN+ +N QL + M G P + L+ + GR
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ + + + G+ P + YN ++DAL ++GH D A+ ++ K + E +T+ +
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNI 193
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ GLC++ R+ + ++ +++ P+ YT ++++ ++ L+++ +MKK+
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAG 392
D A +++ L GR EE Y E+ +S D Y +L+ + + A
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
DLL+++ G + D + ++ GL N+ A K + G++P ++ L+
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDG 373
Query: 453 YAEAKRMENFYKLLQQME 470
+A ++ +L ME
Sbjct: 374 LCKAGHVDRAMRLFASME 391
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 162/374 (43%), Gaps = 17/374 (4%)
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
Y V +MR + G++P V YN ++ + L+ L ++D+ GL + ++ L+
Sbjct: 68 YAVTRRMR-EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMS 126
Query: 277 GLCQAGRIDEMLEVLGR-MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
+ GR E ++L + P + Y +L+ L G+ D + +++ + K RV+
Sbjct: 127 CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVK 185
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P++M Y +I GL RV + +E+K G+ + Y ++++ + ++ G L
Sbjct: 186 PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQL 245
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP-DFLSVKPLLVLYA 454
+ GY D ++ L + E+A++ ++ G D +S LL LY
Sbjct: 246 FLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYF 305
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEV-FSYLKEKGYV-SVD 512
+ ++ LL+++E G D + G E + + E G SV
Sbjct: 306 KDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVV 365
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI----KQACEC 568
N L+D L K G + +A+ LF + D F+Y+ + G + K C
Sbjct: 366 TCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSC 421
Query: 569 HNKIIEMSCIPSIA 582
+NK ++ IPS A
Sbjct: 422 YNKGMK---IPSSA 432
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 133/586 (22%), Positives = 247/586 (42%), Gaps = 58/586 (9%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFA-SYNAFAYCMNRNNHHRAADQLPE 186
TP +E+LK +P L+ +FF Y N YN ++R+N D++
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRS 157
Query: 187 LMDSQGKPPSE---KQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
++DS K ILI + + ++ K+ +K F Y ++ A
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGNT----EDLQMCLRLVKKWDLKMNSFTYKCLLQAY 213
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
+R+ A VY + + G + + +L+ L + ++ +V M+++ CR D
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDE 270
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
+ YT+++R + G D + ++ EM + + +V+ Y T++ L+ G V++ +F
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
M G + Y L+ VA ++ +++ +S Y GIY+ L+ L L
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE--ISKRYMTQ-GIYSYLVRTLSKLGH 387
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
+AH+LF + FPV + +
Sbjct: 388 VSEAHRLF-------------------------------------CDMWSFPVKGERDSY 410
Query: 484 FSIFVEKKGP---IMALEVFSYLKEKGYVS-VDIYNILMDSLHKVGEMKKALSLFDEING 539
S+ G I A+E+ S + EKG V+ +YN + +L K+ ++ LF+++
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE 599
PD F+Y+I I +GE+ +A ++ C P I +Y L L K G++DE
Sbjct: 471 DGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDE 530
Query: 600 AMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
A + ++ + P YS + K+ E + EM+ +GC P V + ++
Sbjct: 531 AHVRFKE-MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 660 SGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL--IDHMKKK 703
+ K G EA ++S ++++ L +S T E L + H K +
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 190/445 (42%), Gaps = 16/445 (3%)
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
R D + +L M + ++ +L+ +L CLR+ +KK ++ + Y
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYK 207
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
++ + + ++ E++ GH +D Y L+++ K F+ D+
Sbjct: 208 CLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFE---DMKKR 264
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
R D Y +I + + K ++A LF I EGL + + L+ + A+ K ++
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
++ +M + G + + +G ++ L+ + ++ Y++ IY+ L+ +L
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR-YMTQGIYSYLVRTLS 383
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K+G + +A LF ++ +K + SY + G+ +A E +KI E +
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
Y + L K+ +I L + S P F Y++ + + + ++ I + E
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPS-PDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
+ + C P + +++I+ + K G ++EA F ++E+ L D + Y + K
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL--NPDVVTYSTLMECFGKT 560
Query: 703 KTADLVMSGLKFFGLESKLKSKGCK 727
+ ++ + L ++ KGC+
Sbjct: 561 ERVEMA------YSLFEEMLVKGCQ 579
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 193/463 (41%), Gaps = 51/463 (11%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L M+ G P + IL + G + V M +K G+ P V Y ++
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK-GLSPDVITYTILL 334
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVT-FMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+ G++D+ L + D G + + V++ GLC+ GRIDE L + +M+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
PD+ AY++++ L G D L +++EM R+ P+ + ++ GL G + E
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L + S G +D +Y +++ + + +L K ++ +G + +N+LI G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP---- 475
+A K+ V GL P +S L+ YA ++ +L ++M+ G P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 476 ----VIDDLARFFS-----------IFVEKKGPIMALE-------------VFSYL---- 503
+ L R + IF + K + +E + YL
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 504 -KEKGYVSVDI------------YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
+V ++I YNIL+DSL G ++KA S + N+ F+Y+
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 551 IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
I H G+ + A + ++++ SI Y + LC+
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 202/472 (42%), Gaps = 20/472 (4%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+ P V +N IM + G +D+A S + + GL + +L+ GLC G I E L
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
E+ M + PD Y +L + G + G V +M + PDV+ Y ++ G
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES-FVAVNKVGAGFDLLKDLVSSGYRAD 407
G ++ G VL K+M S+G ++ I S++ S ++ L + + G D
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
L Y+ +I GLC L KF+ A L+ + + P+ + LL+ + + LL
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 468 QMEKLGFPVIDDLARFFSIFVE---KKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLH 522
+ G + D+ ++I ++ K G I ALE+F + E G SV +N L+
Sbjct: 458 SLISSGETL--DIV-LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K + +A + D I L P SY+ + + + G K E ++ P+
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRD-----C---LGNVTSG---PMEFMYSLTVIHACKSN 631
Y + KGLC+ + + ++R+ C L ++ S P + Y+ + + C+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
L M + + + +I +C YG I +A +L+E+ +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 198/504 (39%), Gaps = 82/504 (16%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G+ P V+ +N +++ L G + AL + D + G++ + VT+ +L KG G I
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 286 EMLEVLGRMREKLCRPDVFAYTVL--------------------------VRILVP---- 315
EV+ M +K PDV YT+L + ++P
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 316 ------QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
G +D L ++ +MK D + PD++AY+ +I GL G+ + L+ EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
L + +G+L+ + LL L+SSG D+ +YN +I+G E+A +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
LF+V I+ G+ P + L+ Y + + + K+L ++ G
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--------------- 534
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
P SV Y LMD+ G K L E+ + P + +Y
Sbjct: 535 --AP----------------SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576
Query: 550 SIAI--LC---------HVDLGEIKQACECHNKIIEMSCI-PSIAAYKCLTKGLCKIGEI 597
S+ LC HV I + C+ + +E I P Y + + LC++ +
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 598 DEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSA 657
A + + + + + Y++ + C K + + +Q +
Sbjct: 637 SGAFVFL-EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 658 VISGMCKYGTIEEARKVFSNLRER 681
+I C G E A K+F L R
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 188/435 (43%), Gaps = 18/435 (4%)
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
++D +KE D+ T+ +V GLC+ ++++ + L K P V ++ ++
Sbjct: 175 MWDVYKEIK-DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
G +D + + K + P V ++ +I GL G + E L +M G D
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
Y L + F + + +++++D++ G D+ Y L+ G C L + L +
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Query: 435 IQEGLEPDFLSVKPLLVLYA---EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE-- 489
+ G E + S+ P V+ + + R++ L QM+ G DL +SI +
Sbjct: 354 LSRGFELN--SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS--PDLVA-YSIVIHGL 408
Query: 490 -KKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
K G MAL ++ + +K + + + L+ L + G + +A SL D + + D
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
Y+I I + G I++A E +IE PS+A + L G CK I EA ++ D
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-D 527
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
+ P Y+ + + + + + EM +G PP NV S + G+C+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 667 TIEEARKVFSNLRER 681
E V LRER
Sbjct: 588 KHENCNHV---LRER 599
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 40/336 (11%)
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
V++ + K+MK + + Y S++ F +K+ + +KD + Y+
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYST 192
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+++GLC K E A + + + + P +S ++ Y KLG
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC----------------KLG 236
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSL 533
F D+A+ F V K G + SV +NIL++ L VG + +AL L
Sbjct: 237 FV---DMAKSFFCTVLKCGLV--------------PSVYSHNILINGLCLVGSIAEALEL 279
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
++N ++PDS +Y+I LG I A E +++ P + Y L G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
+G ID ++L++D L S+ + CK+ ++ + + N+M G P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
S VI G+CK G + A ++ + ++++L S T
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 166 NAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR------MHSDAGRGLRVYHV 219
+A+A C N ++ D+L M ++G PP+ + ++ + H + LR +
Sbjct: 546 DAYANCGNT----KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR-ERI 600
Query: 220 YEKMRNKF------GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+EK + G+ P YN I+ L R HL A + K LD T+ +
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ LC G I + + ++E+ FAYT L++ +G+ + ++++ ++
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 334 VEPDVMAYATIITGL 348
+ Y+ +I L
Sbjct: 721 FNVSIRDYSAVINRL 735
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 193/463 (41%), Gaps = 51/463 (11%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A +L M+ G P + IL + G + V M +K G+ P V Y ++
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK-GLSPDVITYTILL 334
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVT-FMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+ G++D+ L + D G + + V++ GLC+ GRIDE L + +M+
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
PD+ AY++++ L G D L +++EM R+ P+ + ++ GL G + E
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L + S G +D +Y +++ + + +L K ++ +G + +N+LI G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP---- 475
+A K+ V GL P +S L+ YA ++ +L ++M+ G P
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 476 ----VIDDLARFFS-----------IFVEKKGPIMALE-------------VFSYL---- 503
+ L R + IF + K + +E + YL
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 504 -KEKGYVSVDI------------YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
+V ++I YNIL+DSL G ++KA S + N+ F+Y+
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 551 IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
I H G+ + A + ++++ SI Y + LC+
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 202/472 (42%), Gaps = 20/472 (4%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+ P V +N IM + G +D+A S + + GL + +L+ GLC G I E L
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
E+ M + PD Y +L + G + G V +M + PDV+ Y ++ G
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES-FVAVNKVGAGFDLLKDLVSSGYRAD 407
G ++ G VL K+M S+G ++ I S++ S ++ L + + G D
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
L Y+ +I GLC L KF+ A L+ + + P+ + LL+ + + LL
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 468 QMEKLGFPVIDDLARFFSIFVE---KKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLH 522
+ G + D+ ++I ++ K G I ALE+F + E G SV +N L+
Sbjct: 458 SLISSGETL--DIV-LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K + +A + D I L P SY+ + + + G K E ++ P+
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRD-----C---LGNVTSG---PMEFMYSLTVIHACKSN 631
Y + KGLC+ + + ++R+ C L ++ S P + Y+ + + C+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
L M + + + +I +C YG I +A +L+E+ +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNV 686
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 198/504 (39%), Gaps = 82/504 (16%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G+ P V+ +N +++ L G + AL + D + G++ + VT+ +L KG G I
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 286 EMLEVLGRMREKLCRPDVFAYTVL--------------------------VRILVP---- 315
EV+ M +K PDV YT+L + ++P
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 316 ------QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
G +D L ++ +MK D + PD++AY+ +I GL G+ + L+ EM K
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
L + +G+L+ + LL L+SSG D+ +YN +I+G E+A +
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
LF+V I+ G+ P + L+ Y + + + K+L ++ G
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL--------------- 534
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
P SV Y LMD+ G K L E+ + P + +Y
Sbjct: 535 --AP----------------SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576
Query: 550 SIAI--LC---------HVDLGEIKQACECHNKIIEMSCI-PSIAAYKCLTKGLCKIGEI 597
S+ LC HV I + C+ + +E I P Y + + LC++ +
Sbjct: 577 SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL 636
Query: 598 DEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSA 657
A + + + + + Y++ + C K + + +Q +
Sbjct: 637 SGAFVFL-EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 658 VISGMCKYGTIEEARKVFSNLRER 681
+I C G E A K+F L R
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHR 719
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 188/435 (43%), Gaps = 18/435 (4%)
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
++D +KE D+ T+ +V GLC+ ++++ + L K P V ++ ++
Sbjct: 175 MWDVYKEIK-DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
G +D + + K + P V ++ +I GL G + E L +M G D
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
Y L + F + + +++++D++ G D+ Y L+ G C L + L +
Sbjct: 294 TYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM 353
Query: 435 IQEGLEPDFLSVKPLLVLYA---EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE-- 489
+ G E + S+ P V+ + + R++ L QM+ G DL +SI +
Sbjct: 354 LSRGFELN--SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLS--PDLVA-YSIVIHGL 408
Query: 490 -KKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
K G MAL ++ + +K + + + L+ L + G + +A SL D + + D
Sbjct: 409 CKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
Y+I I + G I++A E +IE PS+A + L G CK I EA ++ D
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-D 527
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
+ P Y+ + + + + + EM +G PP NV S + G+C+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 667 TIEEARKVFSNLRER 681
E V LRER
Sbjct: 588 KHENCNHV---LRER 599
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 40/336 (11%)
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
V++ + K+MK + + Y S++ F +K+ + +KD + Y+
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYST 192
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+++GLC K E A + + + + P +S ++ Y KLG
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC----------------KLG 236
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSL 533
F D+A+ F V K G + SV +NIL++ L VG + +AL L
Sbjct: 237 FV---DMAKSFFCTVLKCGLV--------------PSVYSHNILINGLCLVGSIAEALEL 279
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
++N ++PDS +Y+I LG I A E +++ P + Y L G C+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
+G ID ++L++D L S+ + CK+ ++ + + N+M G P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
S VI G+CK G + A ++ + ++++L S T
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 17/195 (8%)
Query: 166 NAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR------MHSDAGRGLRVYHV 219
+A+A C N ++ D+L M ++G PP+ + ++ + H + LR +
Sbjct: 546 DAYANCGNT----KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR-ERI 600
Query: 220 YEKMRNKF------GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+EK + G+ P YN I+ L R HL A + K LD T+ +
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ LC G I + + ++E+ FAYT L++ +G+ + ++++ ++
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Query: 334 VEPDVMAYATIITGL 348
+ Y+ +I L
Sbjct: 721 FNVSIRDYSAVINRL 735
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 9/400 (2%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
+NA C+ RN + L MD P ILI + R V+E+MR
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 225 NKFG-----VKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVTFMVLVKGL 278
K +K +N ++D L + G L A + K E+ VT+ L+ G
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+AG+++ EV+ RM+E +P+V +V + L+ + + +M+K+ V+ +V
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
+ Y T+I + VE+ +++M G D IY +L+ V + +++
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
L G+ DL YN LI C+ N EK +++ +EG +PD ++ L+ + + K
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 459 MENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD--IYN 515
E+ ++++QM + G P + + AL++F + V+ + IYN
Sbjct: 597 FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN 656
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
IL+++ K+G +ALSL +E+ ++P+ +Y+ C
Sbjct: 657 ILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKC 696
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 184/437 (42%), Gaps = 17/437 (3%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
GV P R + +L + + A + D ++ E F L+ L + I M
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR------VEPDVMAY 341
+++ +M E RPDV +L+ L +D L V+E+M+ R ++ D + +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI-YGSLVESFVAVNKVGAGFDLLKDLV 400
T+I GL GR++E L MK + + A+ Y L++ + K+ +++ +
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
+ ++ N ++ G+C + A F +EG++ + ++ L+ +E
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 461 NFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNIL 517
++M + G P S + + A+ V LKE G+ S+D+ YN+L
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGF-SLDLLAYNML 552
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC---HVDLGEIKQACECHNKIIE 574
+ +K + ++ KPDS +Y+ I H D +++ E ++ E
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME---QMRE 609
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
P++ Y + C +GE+DEA+ L +D + P +Y++ + K +
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 635 KVIGVLNEMMQQGCPPG 651
+ + + EM + P
Sbjct: 670 QALSLKEEMKMKMVRPN 686
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 6/179 (3%)
Query: 154 KQKGYHHNFASYNAFA--YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG 211
K+ G+ + +YN +C ++NN + + L + M+ +GK P + LI
Sbjct: 538 KEGGFSLDLLAYNMLIGLFC-DKNNAEKVYEMLTD-MEKEGKKPDSITYNTLISFFGKHK 595
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVT 270
V + E+MR G+ P V Y ++DA G LD AL ++ D ++ V
Sbjct: 596 DFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
+ +L+ + G + L + M+ K+ RP+V Y L + L + + L++ +EM
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 141/604 (23%), Positives = 246/604 (40%), Gaps = 72/604 (11%)
Query: 112 KWGPPVVTELSK--LRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
K+ TEL + + R+ L E L + ++ FF W+E G H+ S +
Sbjct: 98 KYESGFSTELDQYTVIRILDDLFEETL----DASIVLYFFRWSELWIGVEHSSRSISRMI 153
Query: 170 YCMNRNN-HHRAADQLPELMD-SQGKPPS------------------EKQFEILIRMHSD 209
+ + N ++RA D L L+ G+ S E F ILI D
Sbjct: 154 HILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILI----D 209
Query: 210 AGRGLRVYHVYEKMR---NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
R ++ K+ ++FG+ P + ++ ++R L+LA + G
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+ ++ C G D+ E+L M+ RPD+ A+TV + L G L V
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
++K + D ++ +++I G G+ EE L + + ++ +Y S + + +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIF---VYSSFLSNICST 386
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
+ + +++ G D Y +I+G CNL + +KA + F ++ G P S+
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP---SL 443
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEK 506
+L R F I D A VF +K +
Sbjct: 444 TTSTILIGACSR---------------FGSISD----------------AESVFRNMKTE 472
Query: 507 GY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
G + V YN LM K ++ K L DE+ A + PD +Y+I I V G I +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
E +++I +PS A+ + G K G+ EA +L + ++ P S +
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF-YMADLRMKPDVVTCSALLH 591
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
CK+ EK I + N+++ G P V+ + +I G C G IE+A ++ + +R +L
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 686 ESDT 689
T
Sbjct: 652 NEST 655
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 190/417 (45%), Gaps = 14/417 (3%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A + E M S+G+ + + IR + G + + + M++ +G++P + + +
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH-YGIRPDIVAFTVFI 313
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
D L + G L A SV K G+ ++ V+ ++ G C+ G+ +E ++++ R R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LR 370
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
P++F Y+ + + G++ +++E+ + + PD + Y T+I G N GR ++ +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F + G+ L+ + + + +++ + G + D+ YNNL+ G
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP----V 476
++ K +L G+ PD + L+ ++ +++ ++ + GF
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY--NILMDSLHKVGEMKKALSLF 534
D+ FS K+G + + + D+ + L+ K M+KA+ LF
Sbjct: 551 FTDVIGGFS----KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
+++ A LKPD Y+ I + +G+I++ACE +++ +P+ + + L GL
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 179 RAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNR 238
RA+ E+ + G P + +I + + GR + + + + K G P +
Sbjct: 391 RASTIFQEIFE-LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL-KSGNPPSLTTSTI 448
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++ A R G + A SV+ + K +GL + VT+ L+ G + +++++ E++ MR
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
PDV Y +L+ +V +G +D + E+ + P +A+ +I G S G +E +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+L+ M D +L+ + ++ L L+ +G + D+ +YN LI G
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
C++ EKA +L + +Q G+ P+ S LVL E KR N
Sbjct: 629 CSVGDIEKACELIGLMVQRGMLPN-ESTHHALVLGLEGKRFVN 670
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 141/604 (23%), Positives = 246/604 (40%), Gaps = 72/604 (11%)
Query: 112 KWGPPVVTELSK--LRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFA 169
K+ TEL + + R+ L E L + ++ FF W+E G H+ S +
Sbjct: 98 KYESGFSTELDQYTVIRILDDLFEETL----DASIVLYFFRWSELWIGVEHSSRSISRMI 153
Query: 170 YCMNRNN-HHRAADQLPELMD-SQGKPPS------------------EKQFEILIRMHSD 209
+ + N ++RA D L L+ G+ S E F ILI D
Sbjct: 154 HILVSGNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILI----D 209
Query: 210 AGRGLRVYHVYEKMR---NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
R ++ K+ ++FG+ P + ++ ++R L+LA + G
Sbjct: 210 CCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHL 269
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+ ++ C G D+ E+L M+ RPD+ A+TV + L G L V
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
++K + D ++ +++I G G+ EE L + + ++ +Y S + + +
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIF---VYSSFLSNICST 386
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
+ + +++ G D Y +I+G CNL + +KA + F ++ G P S+
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP---SL 443
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEK 506
+L R F I D A VF +K +
Sbjct: 444 TTSTILIGACSR---------------FGSISD----------------AESVFRNMKTE 472
Query: 507 GY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
G + V YN LM K ++ K L DE+ A + PD +Y+I I V G I +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVI 625
E +++I +PS A+ + G K G+ EA +L + ++ P S +
Sbjct: 533 NEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF-YMADLRMKPDVVTCSALLH 591
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
CK+ EK I + N+++ G P V+ + +I G C G IE+A ++ + +R +L
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 686 ESDT 689
T
Sbjct: 652 NEST 655
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 190/417 (45%), Gaps = 14/417 (3%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
A + E M S+G+ + + IR + G + + + M++ +G++P + + +
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKH-YGIRPDIVAFTVFI 313
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
D L + G L A SV K G+ ++ V+ ++ G C+ G+ +E ++++ R R
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LR 370
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
P++F Y+ + + G++ +++E+ + + PD + Y T+I G N GR ++ +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F + G+ L+ + + + +++ + G + D+ YNNL+ G
Sbjct: 431 FGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGK 490
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP----V 476
++ K +L G+ PD + L+ ++ +++ ++ + GF
Sbjct: 491 THQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY--NILMDSLHKVGEMKKALSLF 534
D+ FS K+G + + + D+ + L+ K M+KA+ LF
Sbjct: 551 FTDVIGGFS----KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
+++ A LKPD Y+ I + +G+I++ACE +++ +P+ + + L GL
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 179 RAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNR 238
RA+ E+ + G P + +I + + GR + + + + K G P +
Sbjct: 391 RASTIFQEIFE-LGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL-KSGNPPSLTTSTI 448
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++ A R G + A SV+ + K +GL + VT+ L+ G + +++++ E++ MR
Sbjct: 449 LIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG 508
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
PDV Y +L+ +V +G +D + E+ + P +A+ +I G S G +E +
Sbjct: 509 ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAF 568
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+L+ M D +L+ + ++ L L+ +G + D+ +YN LI G
Sbjct: 569 ILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGY 628
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
C++ EKA +L + +Q G+ P+ S LVL E KR N
Sbjct: 629 CSVGDIEKACELIGLMVQRGMLPN-ESTHHALVLGLEGKRFVN 670
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 176/377 (46%), Gaps = 12/377 (3%)
Query: 128 TPSLVAEVLK-VQTNPTLSFKFFHWAEKQ-KGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
TP+LV VLK + + + +FFH+ + + Y H+ +S++ R + H L
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
M S PS K F I+ ++ AG+ + ++ M ++ G + +N I+D L +
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM-HEHGCFQDLASFNTILDVLCK 173
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
+ ++ A ++ + + VT+ V++ G C R + LEVL M E+ P++
Sbjct: 174 SKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y +++ G + + EMKK E DV+ Y T++ G G ++ +F EM
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
+G L A Y ++++ + V + +++V GY ++ YN LI GL + +F
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG----FPVIDDLA 481
+ +L Q EG EP+F + ++ Y+E +E K L EK+G P +D
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE---KALGLFEKMGSGDCLPNLDTYN 409
Query: 482 RFFS-IFVEKKGPIMAL 497
S +FV K+ M +
Sbjct: 410 ILISGMFVRKRSEDMVV 426
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 35/332 (10%)
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
E + K +KA KLF + G D S +L + ++KR+E Y+L + + G
Sbjct: 134 ERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALR--GRF 191
Query: 476 VIDDLARFFSIFVE-----KKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKK 529
+D + +++ + K+ P ALEV + E+G ++ YN ++ + G+++
Sbjct: 192 SVDTVT--YNVILNGWCLIKRTP-KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
A F E+ + + D +Y+ + GEIK+A +++I +PS+A Y + +
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 590 GLCKIGEIDEAM-----MLVRDCLGNVTSGPMEFMYSLTV---IHACKSNDAEKVIGVLN 641
LCK ++ A+ M+ R NVT+ Y++ + HA + + E+ ++
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTT------YNVLIRGLFHAGEFSRGEE---LMQ 359
Query: 642 EMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM- 700
M +GC P + +I + +E+A +F + L DT LI M
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY---NILISGMF 416
Query: 701 -KKKTADLVMSGLKFFGLES-KLKSK-GCKLL 729
+K++ D+V++G + F E +L+SK G +LL
Sbjct: 417 VRKRSEDMVVAGNQAFAKEILRLQSKSGSRLL 448
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 166/348 (47%), Gaps = 22/348 (6%)
Query: 117 VVTELSKLRRV-TPSLVAEVLKVQTNP-TLSFKFFHWAEKQKGYHHNFASYNAFAYCMNR 174
VV ELSK V T SLV +VL+ +N ++ FF WA Q GY H+ +YNA + +
Sbjct: 119 VVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGK 178
Query: 175 NNHHRAADQLPELMDSQGKPPSEKQFEI-----LIRMHSDAGRGLRVYHVYEKMRNKFGV 229
R D + EL++ K K + ++R + +G+ + + +M +GV
Sbjct: 179 C---RNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGV 235
Query: 230 KPRVFLYNRIMDALIRTGHLDLA----LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K N +MDAL++ ++ A L ++D K D TF +L+ G C+A + D
Sbjct: 236 KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDAR-----TFNILIHGFCKARKFD 290
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ ++ M+ PDV YT V +G+ + EEM+++ P+V+ Y ++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
L +V E ++++MK G + D Y SL+ + ++ +D+ + G R
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQ-VTIQEG--LEPDFLSVKPLL 450
D+ +YN +I + ++ E A +L + + +EG P+ + PLL
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 156/390 (40%), Gaps = 14/390 (3%)
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDR----VEPDVMAYATIITGLSNGGRVEEGYVL 360
Y +V +L N D + EM K+ V D M+ ++ L+ G+ +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMS--KVMRRLAKSGKYNKAVDA 225
Query: 361 FKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
F EM KS G D SL+++ V N + ++ L + + D +N LI G C
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFC 284
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVID 478
KF+ A + + PD ++ + Y + ++L++M + G P +
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI 537
+ K AL V+ +KE G V Y+ L+ L K G K A +F+++
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE---MSCIPSIAAYKCLTKGLCKI 594
++ D Y+ I + + A ++ + SC P++ Y L K C
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
++ +L+ + N S + Y L + C S E+ E +++G P +
Sbjct: 465 KKMKLLGILLHHMVKNDVSIDVS-TYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
Query: 655 CSAVISGMCKYGTIEEARKVFSNLRERKLL 684
C ++ + K E K+ S ++ + ++
Sbjct: 524 CKMLVDELEKKNMAEAKLKIQSLVQSKTMI 553
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 9/252 (3%)
Query: 161 NFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYH 218
+ +Y +F AYC + R +++ E M G P+ + I++ + +
Sbjct: 307 DVVTYTSFVEAYC--KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG 364
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
VYEKM+ G P Y+ ++ L +TG A +++D G+ + + + ++
Sbjct: 365 VYEKMKED-GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAA 423
Query: 279 CQAGRIDEMLEVLGRMREK---LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
R + L +L RM ++ C P+V Y L+++ + + + M K+ V
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVS 483
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
DV Y +I GL G+VEE + F+E KG + + LV+ N A
Sbjct: 484 IDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLK- 542
Query: 396 LKDLVSSGYRAD 407
++ LV S D
Sbjct: 543 IQSLVQSKTMID 554
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 505 EKGY-VSVDI--YNILMDSLHKVGEMKKA----LSLFDEINGANLKPDSFSYSIAI--LC 555
EK Y V D N LMD+L K ++ A L LFD I KPD+ +++I I C
Sbjct: 230 EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTI-----KPDARTFNILIHGFC 284
Query: 556 HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGE---IDEAMMLVRD--CLGN 610
+ +A K+ E + P + Y + CK G+ ++E + +R+ C N
Sbjct: 285 KARKFDDARAMMDLMKVTEFT--PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPN 342
Query: 611 VTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEE 670
V + Y++ + KS + +GV +M + GC P S++I + K G ++
Sbjct: 343 VVT------YTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 671 ARKVFSNLRERKLLTESDTIVYDEFL 696
A ++F ++ + + D +VY+ +
Sbjct: 397 AAEIFEDMTNQGV--RRDVLVYNTMI 420
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/569 (21%), Positives = 238/569 (41%), Gaps = 42/569 (7%)
Query: 131 LVAEVLKVQTNPTLSFK--FFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELM 188
+++ +L+ + P S K F ++ H+F SY + +N + A L +
Sbjct: 77 VLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFAL 135
Query: 189 DSQGKPPSEKQFEILIRMHSDAGRGLRV-YHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
++G PS +L+ H + RV +V+ + +P F+Y + + A ++
Sbjct: 136 RNEGIYPSSDSLTLLLD-HLVKTKQFRVTINVFLNILES-DFRPSKFMYGKAIQAAVKLS 193
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
+ L +++ K D + + VL+ GLC+ R+++ ++ M + P + Y
Sbjct: 194 DVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYN 253
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L+ GN + +V E MK D +EP ++ + T++ GL G VE+ + KEMK
Sbjct: 254 TLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDL 313
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G + D + L + + + K A + + V SG + + + L+ LC K EKA
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF 487
++ + +GL P+ + ++ Y + ++ MEK G D LA
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP-DHLA------ 426
Query: 488 VEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
YN L+ ++GEM+ A +++ + P
Sbjct: 427 --------------------------YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
+Y+I I + E + + ++ + +P++ +Y L LCK ++ EA ++ RD
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD- 519
Query: 608 LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGT 667
+ + P +Y++ + C E EM+++G V + +I G+ G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 668 IEEARKVFSNLRERKLLTESDTIVYDEFL 696
+ EA + + + L + D Y+ +
Sbjct: 580 LSEAEDLLLEISRKGL--KPDVFTYNSLI 606
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 199/432 (46%), Gaps = 30/432 (6%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ P +YN ++D R G L A + ++ G+ + + + L++ C+ G ++
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ + +M+ K P V Y +L+ + D C + +EM+ + P+V++Y T+I
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G ++ E ++ ++M+ +G IY L++ + K+ F K+++ G +
Sbjct: 504 LCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELN 563
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
L YN LI+GL K +A L ++GL+PD + L+ Y A ++ L +
Sbjct: 564 LVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 468 QMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGE 526
+M++ G P + S+ K+G + +F + K + +YN ++ G+
Sbjct: 624 EMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGEMSLKP--DLLVYNGVLHCYAVHGD 680
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI---PSIAA 583
M+KA +L ++ ++ D +Y+ IL + +G++ CE + I EM+ P
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL---CEVRSLIDEMNAREMEPEADT 737
Query: 584 YKCLTKGLCKIG----------EIDEAMMLVRDCLGN-VTSGPMEFMYSLTVIHACKSND 632
Y + KG C++ E+ E L+ C+GN + SG E +S +
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE---------EWRSKE 788
Query: 633 AEKVIGVLNEMM 644
AE VI +N M
Sbjct: 789 AEIVISEMNGRM 800
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 191/430 (44%), Gaps = 13/430 (3%)
Query: 190 SQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
++G P+E + +I + G + E M K G+KP YN ++ G +
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAME-KQGMKPDHLAYNCLIRRFCELGEM 440
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
+ A + K G+ T+ +L+ G + D+ ++L M + P+V +Y L
Sbjct: 441 ENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
+ L L V +M+ V P V Y +I G + G++E+ + KEM KG
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGI 560
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
++ Y +L++ K+ DLL ++ G + D+ YN+LI G ++
Sbjct: 561 ELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME-KLGFPVIDDLARFFSIFV 488
L++ + G++P L LL+ + +E +L +M K V + + +++
Sbjct: 621 LYEEMKRSGIKPT-LKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 489 EKKGPIMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
+ + A + + EK + +D YN L+ KVG++ + SL DE+N ++P++
Sbjct: 680 DMEK---AFNLQKQMIEKS-IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+Y+I + H ++ + A + ++ E + + L GL + EA +++ +
Sbjct: 736 DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISE 795
Query: 607 ----CLGNVT 612
LG+VT
Sbjct: 796 MNGRMLGDVT 805
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 219/494 (44%), Gaps = 44/494 (8%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G V+ +N ++ L R A+S+ + + + L + ++ +++G C+ ++
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ LE+ M+ C + + +L+ G +D + +EMK +E D++ Y ++I
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
G + G ++ G LF E+ +G Y +L+ F + ++ ++ + ++ G R
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV------LYAEAKRM 459
++ Y LI+GLC + K ++A +L + I++ EP+ ++ ++ L A+A +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 460 ENFYKL----------------------LQQMEKLGFPVIDDLARFFSIFVEKKGPI--- 494
K L + KL + ++ D + + I
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 495 -------MALEVFSYLKEK-GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
AL+++ L EK G NIL++S K G++ KA+ L+ +I+ + + +S
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 547 FSYSIAI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+Y+ I C + + + C ++ E+ PS+ Y CL LCK G +D+A L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ--PSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 605 RDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
+ + + P +++ + + K+ D + +L M + G P S +I+ K
Sbjct: 553 EE-MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 665 YGTIEEARKVFSNL 678
G ++EA F +
Sbjct: 612 LGYLDEAISFFDKM 625
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/644 (21%), Positives = 267/644 (41%), Gaps = 50/644 (7%)
Query: 108 KNGYKWGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNA 167
KN V S L +L+A++++ + N L+F F+ + + NF S +
Sbjct: 55 KNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSR-NHELAFSFYRKMLETDTFI-NFVSLSG 112
Query: 168 FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR-MHSDAGRGLRVYHVYEKMRNK 226
C + A + LM +G + IL++ + + G V + E RN
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN- 171
Query: 227 FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDE 286
+ P VF YN ++ L+ AL + ++ K G VT+ +L+ C+AG++DE
Sbjct: 172 -SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
+ L M+ D+ YT L+R G LD +++E+ + P + Y T+I
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 347 GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA 406
G G+++E +F+ M +G + Y L++ V K LL ++
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
+ YN +I LC A ++ ++ + PD ++ LL ++ KLL
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 467 QQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEK-GYVSVDIYNILMDSLH 522
M K D+ + ++ ++ AL+++ L EK G NIL++S
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL 470
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMSCIPS 580
K G++ KA+ L+ +I+ + + +S +Y+ I C + + + C ++ E+ PS
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ--PS 528
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDC---------------------LGNVTSG----- 614
+ Y CL LCK G +D+A L + G++ S
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 615 --------PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
P F YS + K ++ I ++M+ G P +C +V+ G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 667 TIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVMS 710
++ ++ L ++ ++ + + ++D+M +A++ ++
Sbjct: 649 ETDKLTELVKKLVDKDIVLDKELTCT---VMDYMCNSSANMDLA 689
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 144/342 (42%), Gaps = 10/342 (2%)
Query: 101 FILDAFRKNGYKWGPPVVTELSKLRRVTP-----SLVAEVLKVQTNPTLSFKFFHWAEKQ 155
I++ K+G + EL K RR P +++ L + + + K + K
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 156 KGYHH-NFASYNAFAYCMNRNNH-HRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
Y + SYNA + + + N H+A D L++ G IL+ AG
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGDRVTTNILLNSTLKAGDV 475
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +++++ + V+ Y ++D +TG L++A + + L +
Sbjct: 476 NKAMELWKQISDSKIVRNSD-TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ LC+ G +D+ + M+ PDV ++ +++ + G++ + M +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ PD+ Y+ +I G ++E F +M G D I S+++ ++ +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLN-KFEKAHKLFQVT 434
+L+K LV D + +++ +CN + + A +L +VT
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVT 696
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 135/583 (23%), Positives = 236/583 (40%), Gaps = 43/583 (7%)
Query: 115 PPVVTE--LSKLR------------RVTPSLVAE-VLKVQTNPTLSFKFFHWAEKQKGYH 159
PP+ +E L +R ++TPSLV+ +L + P L+F F + + Y
Sbjct: 43 PPITSEILLESIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDL---YR 99
Query: 160 HNFASYNAFAYCMNRNNHHRAADQL-PELMDSQG-----------------KPPSEKQFE 201
+F + +++ + + QL E++ S+ + S F+
Sbjct: 100 LDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFD 159
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
+L+R + M+ K G P+ N I+ L R ++ A Y D
Sbjct: 160 LLVRCCCQLRMVDEAIECFYLMKEK-GFYPKTETCNHILTLLSRLNRIENAWVFYADMYR 218
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
+ TF +++ LC+ G++ + LG M +P + Y LV+ +G ++G
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEG 278
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
+ EMK +PD+ Y I++ + N GR E + +EMK G + D Y L+
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIR 335
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ F ++V G YN LI GL NK E A L + ++G+
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVF 500
D ++ L+ Y + + + L +M G P + K A E+F
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 501 SYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
+ KG + + N LMD +G M +A SL E++ ++ PD +Y+ +
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
G+ ++A E ++ P +Y L G K G+ A M VRD + ++ P
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFM-VRDEMLSLGFNPTLLT 574
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
Y+ + K+ + E +L EM +G P + +VI M
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 191/411 (46%), Gaps = 18/411 (4%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
+ F +LV+ CQ +DE +E M+EK P ++ +L ++ + +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M + ++ +V + +I L G++++ M+ G Y +LV+ F +
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ ++ ++ S G++ D+ YN ++ +CN +A ++ + + GL PD +S
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNI 332
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLG----FPVIDDLARFFSIFVEKKGPIMALEVF-SYL 503
L+ + +E + +M K G F + L +F+E K I A E+ +
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL--IHGLFMENK--IEAAEILIREI 388
Query: 504 KEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS--IAILCHVDLG 560
+EKG V + YNIL++ + G+ KKA +L DE+ ++P F+Y+ I +LC +
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN-- 446
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMY 620
+ ++A E K++ P + L G C IG +D A L+++ + ++ P + Y
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE-MDMMSINPDDVTY 505
Query: 621 SLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
+ + C E+ ++ EM ++G P ++ + +ISG K G + A
Sbjct: 506 NCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 21/344 (6%)
Query: 99 ARFILDAFRKNGYK-----------W------GPPVVTELSKLRRVTPSLVAEVL--KVQ 139
AR I+ + G++ W V+ E+ ++ V S+ +L
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCS 338
Query: 140 TNPTLSFKFFHWAEK-QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEK 198
N L F + E ++G F +YN + + N AA+ L + +G
Sbjct: 339 NNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV 398
Query: 199 QFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDD 258
+ ILI + G + + ++++M G++P F Y ++ L R A +++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTD-GIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 259 FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN 318
G+ + V L+ G C G +D +L M PD Y L+R L +G
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
+ + EMK+ ++PD ++Y T+I+G S G + +++ EM S G Y +
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
L++ + +LL+++ S G + + ++IE + NL+
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 181/367 (49%), Gaps = 41/367 (11%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G +P + N +++ + A+++ D E G + VTF L+ GL +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E + ++ RM ++ C+PD+ Y +V L +G+ D L + +M+ ++E +V+ Y+T+I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 346 TGLSNGGRVEEGYVLFKEMKSKG-----------------------------HLIDRAI- 375
L ++ LF EM++KG +I+R I
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 376 -----YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ +L+++FV K+ L ++++ ++ Y++LI G C L++ +A ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---F 487
++ I++ P+ ++ L+ + +AKR++ +L ++M + G ++ + + ++ F
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG--LVGNTVTYTTLIHGF 438
Query: 488 VEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
+ + A VF + G + ++ YNIL+D L K G++ KA+ +F+ + + ++PD
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 547 FSYSIAI 553
++Y+I I
Sbjct: 499 YTYNIMI 505
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 199/444 (44%), Gaps = 5/444 (1%)
Query: 190 SQGKP-PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGH 248
+Q +P PS +F L+ + + V EKM G+ ++ YN +++ R
Sbjct: 70 AQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME-ILGISHNLYTYNILINCFCRCSR 128
Query: 249 LDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
L LAL++ + G + + VT L+ G C RI + + ++ +M E +PD +T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
L+ L + + + M + +PD++ Y ++ GL G + L +M++
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
+ IY ++++S +L ++ + G R ++ Y++LI LCN ++ A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIF 487
+L I+ + P+ ++ L+ + + ++ KL ++M K P I + + F
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 488 VEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
A ++ + K + +V YN L++ K + K + LF E++ L ++
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+Y+ I + A +++ + P+I Y L GLCK G++ +A M+V +
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA-MVVFE 487
Query: 607 CLGNVTSGPMEFMYSLTVIHACKS 630
L T P + Y++ + CK+
Sbjct: 488 YLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 211/487 (43%), Gaps = 29/487 (5%)
Query: 243 LIRTG----HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++RTG LD A+ ++ + + F L+ + + + D ++ +M
Sbjct: 49 VLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG 108
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
+++ Y +L+ L L + +M K EPD++ +++ G +G R+ +
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
L +M G+ D + +L+ NK L+ +V G + DL Y ++ GL
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVI 477
C + A L +E + + ++ + + ++ L +ME G P +
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDE 536
+ S A + S + E+ ++ ++ L+D+ K G++ KA L++E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 537 INGANLKPDSFSYSIAI--LCHVD-LGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
+ ++ P+ F+YS I C +D LGE KQ E +I C+P++ Y L G CK
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL---MIRKDCLPNVVTYNTLINGFCK 405
Query: 594 IGEIDEAMMLVRD-----CLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVLNEMMQQG 647
+D+ M L R+ +GN + Y+ T+IH ++ D + V +M+ G
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVT------YT-TLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 648 CPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADL 707
P + + ++ G+CK G + +A VF L+ + E D Y+ +I+ M K
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM--EPDIYTYN-IMIEGM-CKAGKW 514
Query: 708 VMSGLKF 714
M G+ F
Sbjct: 515 KMGGIYF 521
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 185/417 (44%), Gaps = 11/417 (2%)
Query: 298 LCRPDVFA------YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
CR F+ Y ++R + LD + ++ M + R P ++ ++ +++ ++
Sbjct: 32 FCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKM 91
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+ + ++M+ G + Y L+ F +++ LL ++ GY D+
Sbjct: 92 NKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTL 151
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL-VLYAEAKRMENFYKLLQQME 470
N+L+ G C+ N+ A L ++ G +PD ++ L+ L+ K E + + ++
Sbjct: 152 NSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ 211
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK-EKGYVSVDIYNILMDSLHKVGEMKK 529
+ P + + ++ +AL + + ++ K +V IY+ ++DSL K
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
AL+LF E+ ++P+ +YS I C + G A + +IE P++ + L
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
K G++ +A L + + + P F YS + C + + +L M+++ C
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
P V + +I+G CK +++ ++F + +R L+ +T+ Y + + + D
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV--GNTVTYTTLIHGFFQARDCD 445
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 2/299 (0%)
Query: 127 VTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPE 186
VT V L + + L+ + E K N Y+ + + H A L
Sbjct: 219 VTYGAVVNGLCKRGDTDLALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFT 277
Query: 187 LMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
M+++G P+ + LI + GR + M + + P + ++ ++DA ++
Sbjct: 278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDAFVKK 336
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G L A +Y++ + +D T+ L+ G C R+ E ++L M K C P+V Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
L+ +D + ++ EM + + + + Y T+I G + ++FK+M S
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G + Y L++ K+ + + L S D+ YN +IEG+C K++
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 94/242 (38%), Gaps = 34/242 (14%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ KG N +Y++ C+ A +L M + P+ F LI G+
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 214 LRVYHVYEKM---------------------RNKFG-------------VKPRVFLYNRI 239
++ +YE+M ++ G P V YN +
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 240 MDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
++ + +D + ++ + + GL VT+ L+ G QA D V +M
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
P++ Y +L+ L G L + V+E +++ +EPD+ Y +I G+ G+ + G +
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGI 519
Query: 360 LF 361
F
Sbjct: 520 YF 521
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 137/658 (20%), Positives = 262/658 (39%), Gaps = 99/658 (15%)
Query: 116 PVVTELSKLRRVTPSLVAEVLKVQTNP----TLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
P + +L ++P L +V++ N L++ FF+WA KQ+GY ++ +YNA A
Sbjct: 56 PFSPDDPELLILSPELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASI 115
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
++R + + L + + S F IR +AG V++++R P
Sbjct: 116 LSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVP 175
Query: 232 RVFLYNRIMDALIR-------------------------------------TGHLDLALS 254
+ YN +++A+ + TG + ALS
Sbjct: 176 NAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
V+++ G +E ++ +LV C+ G++D+ E++ + E+ R + Y VL+ V
Sbjct: 236 VFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFV 294
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+ +D +++E+M++ + D+ Y +I GL +E L+ E+K G DR
Sbjct: 295 KESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRG 354
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
I G L+ SF +++ +++ + ++ + +Y +L EG + +A+ Q
Sbjct: 355 ILGKLLCSFSEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHEAYSFIQ-N 411
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI 494
+ E D +S KLL+ K P D L+ + V+
Sbjct: 412 LMGNYESDGVS---------------EIVKLLKDHNKAILPDSDSLSIVINCLVKANKVD 456
Query: 495 MALEVFSYLKEKGYVSVD-IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
MA+ + + + G + +YN +++ + K G +++L L E+ A ++P F+ +
Sbjct: 457 MAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 554 LC---------HVDL--------------------------GEIKQACECHNKIIEMSCI 578
C +DL G AC+ + + +
Sbjct: 517 GCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFL 576
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG 638
+ A GL K +D + L RD N P Y + + CK+ +
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICAN-GHCPDVIAYHVLIKALCKACRTMEADI 635
Query: 639 VLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
+ NEM+ +G P +++I G CK G I+ + E + D I Y +
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE--KNPDVITYTSLI 691
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 126/593 (21%), Positives = 234/593 (39%), Gaps = 72/593 (12%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEI-------LIRMHSDAGRG 213
N +YN ++++N EL++++ K + F +++++ + G+
Sbjct: 176 NAYTYNCLLEAISKSNSSSV-----ELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKS 230
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
R V+ ++ ++ + + ++ + + G +D A + + +E + T+ V
Sbjct: 231 ERALSVFNEILSRGWLDEHI--STILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCV 288
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G + RID+ ++ +MR D+ Y VL+ L +L+ L ++ E+K+
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 334 VEPD---------------------------------VMAYATIITGLSNGGRVEEGYVL 360
+ PD ++ Y ++ G V E Y
Sbjct: 349 IPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSF 408
Query: 361 FKEM------------------KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+ + +K L D ++ V NKV LL D+V +
Sbjct: 409 IQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQN 468
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G +YNN+IEG+C + E++ KL G+EP ++ + AE
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGA 528
Query: 463 YKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNIL-MDS 520
LL++M GF P I E + A + + +G++ + + +D
Sbjct: 529 LDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG 588
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L K + + L LF +I PD +Y + I +A N+++ P+
Sbjct: 589 LIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 581 IAAYKCLTKGLCKIGEIDEAM-MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
+A Y + G CK GEID + +VR + P Y+ + C S + I
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVR--MYEDEKNPDVITYTSLIHGLCASGRPSEAIFR 706
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
NEM + C P + A+I G+CK G EA F + E+++ E D+ VY
Sbjct: 707 WNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEM--EPDSAVY 757
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G P V Y+ ++ AL + A ++++ GL T+ ++ G C+ G ID
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
L + RM E PDV YT L+ L G + W EMK P+ + + +I G
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
L G E V F+EM+ K D A+Y SLV SF++ + AGF + +++V G
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 121/309 (39%), Gaps = 1/309 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K G + + N C+ A L + M G P K L++ + GR
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 560
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ + + + G + +D LI+ +D L ++ D +G + + + V
Sbjct: 561 VDACKYLDDVAGE-GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+K LC+A R E + M K +P V Y ++ +G +D L M +D
Sbjct: 620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE 679
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
PDV+ Y ++I GL GR E + EMK K +R + +L++ G
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+++ D +Y +L+ + +F+ + +G P + +L +
Sbjct: 740 VYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVN 799
Query: 454 AEAKRMENF 462
+K +E+
Sbjct: 800 VTSKFVEDL 808
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 199/436 (45%), Gaps = 31/436 (7%)
Query: 126 RVTPSLVAEVLK-VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
R P +V VLK P L+ +FF+W +++ G+ H YN + D+L
Sbjct: 152 RFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDEL 211
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDA---GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMD 241
M+ G + + ILI ++ A G+GL V+EKMR K G + YN ++
Sbjct: 212 VSEMEKNGCDKDIRTWTILISVYGKAKKIGKGL---LVFEKMR-KSGFELDATAYNIMIR 267
Query: 242 ALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE--KLC 299
+L G DLAL Y + E G+ T+ +L+ + ++ ++D + + M ++
Sbjct: 268 SLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEIS 327
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
D F Y L++ G + L + E+K + D + ++ GL R+ +
Sbjct: 328 EHDAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE 385
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+ MK + L D +YG ++ ++ N V + + + SG + Y +++ L
Sbjct: 386 IVDIMKRR-KLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLF 444
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDD 479
L +FEK LF I+ G+EPD +++ ++ + R+ +K+ ME+ G I
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG---IKP 501
Query: 480 LARFFSIFVEK----KGPIMALEVFSYL-KEKGYVSVDIYNILMDSLHKVGE-------- 526
+ +SIFV++ +++F+ + K + DI++ ++ S+ K GE
Sbjct: 502 TWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIK 561
Query: 527 --MKKALSLFDEINGA 540
K++ S DE+NG+
Sbjct: 562 EIQKRSNSYCDELNGS 577
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 174/397 (43%), Gaps = 40/397 (10%)
Query: 212 RGLRVYHV----YEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEE 267
R +V H+ + ++ K G RV +YN ++ +LD+ + + +++G D++
Sbjct: 164 RCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKD 223
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
T+ +L+ +A +I + L V +MR+ D AY +++R L G D L ++
Sbjct: 224 IRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYK 283
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
EM + + + Y ++ ++ +V+ + +M + + +G L++SF
Sbjct: 284 EMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSG 343
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
K+ +L+++L + D + L++GLC N+ A ++ + + L+
Sbjct: 344 KIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS----- 398
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
N Y ++ G+ +D+++ ALE F +K+ G
Sbjct: 399 -------------NVYGIIIS----GYLRQNDVSK-------------ALEQFEVIKKSG 428
Query: 508 Y-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
V Y +M L K+ + +K +LF+E+ ++PDS + + + H+ + +A
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAW 488
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMML 603
+ + + E P+ +Y K LC+ DE + +
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/582 (19%), Positives = 228/582 (39%), Gaps = 118/582 (20%)
Query: 207 HSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
+D + L + V +K G PRV Y IM L + + +++++ E+G++
Sbjct: 411 QNDVSKALEQFEVIKKS----GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+ V +V G R+ E +V M EK +P +Y++ V+ L D ++++
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
+M ++ ++ +I+ + G E+ + L KE++ + + + GS F
Sbjct: 527 NQMHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQKRSNSYCDELNGSGKAEFSQE 585
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNL-IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
++ ++ + + S L + + ++ +C + + + ++ T QE LE +
Sbjct: 586 EELVDDYNCPQLVQQSALPPALSAVDKMDVQEIC---RVLSSSRDWERT-QEALEKSTVQ 641
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-------MALE 498
P LV+ ++L+ + G V+ RFFS ++ G M+++
Sbjct: 642 FTPELVV-----------EVLRHAKIQGNAVL----RFFSWVGKRNGYKHNSEAYNMSIK 686
Query: 499 V-------------FSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP 544
V F ++ +G ++ D + I++ + G A+ F E+ L P
Sbjct: 687 VAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIP 746
Query: 545 DSFSYS--IAILCHVDLGEIKQA--------------------------CECHNKIIEMS 576
S ++ I +LC +++A CE N S
Sbjct: 747 SSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKS 806
Query: 577 CI--------PSIAAYKCLTKGLCKIGEIDEAM-----------MLVRDCLGNVTSG--- 614
C+ P AY + LC+IG+++EA+ +L + G++ G
Sbjct: 807 CLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ 866
Query: 615 --------------------PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
P +Y+ +++ K EKV+ +M + C P V
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 655 CSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
+A+I G G +EEA F N+ ER T D Y +F+
Sbjct: 927 YTAMICGYMSLGKVEEAWNAFRNMEERG--TSPDFKTYSKFI 966
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 9/347 (2%)
Query: 128 TPSLVAEVL---KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
TP LV EVL K+Q N L +FF W K+ GY HN +YN + L
Sbjct: 643 TPELVVEVLRHAKIQGNAVL--RFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSL 700
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
M QG ++ + I+I + G +++M++ G+ P + ++ L
Sbjct: 701 FYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKD-MGLIPSSSTFKCLITVLC 759
Query: 245 --RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+ +++ A + + G +R + LC+ G + L + K+ P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLG-KIGFPV 818
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
AY++ +R L G L+ L + +R D Y +I+ GL G +++
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
MK G +Y SL+ F ++ + + + + Y +I G +L
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
K E+A F+ + G PDF + + +A + E+ KLL +M
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 142/340 (41%), Gaps = 12/340 (3%)
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
AY I G ++ LF EM+ +G LI + + ++ + K++
Sbjct: 680 AYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEM 739
Query: 400 VSSGYRADLGIYNNLIEGLCNLN--KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
G + LI LC E+A + F+ I+ G PD V+ L E
Sbjct: 740 KDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVG 799
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE-----VFSYLKEKGYVSVD 512
++ L + K+GFPV +SI++ I LE + S+ E+ +
Sbjct: 800 NTKDAKSCLDSLGKIGFPV----TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY 855
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
Y ++ L + G+++KAL + + KP Y+ I+ ++++ E K+
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
SC PS+ Y + G +G+++EA R+ TS P YS + C++
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS-PDFKTYSKFINCLCQACK 974
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
+E + +L+EM+ +G P + V G+ + G + AR
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 4/207 (1%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P Y+ + AL R G L+ ALS F+ + ++ T+ +V GL Q G + + L+
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+ M+E +P V YT L+ + L+ L ++M+ + EP V+ Y +I G +
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G+VEE + F+ M+ +G D Y + K LL +++ G
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQE 437
+ + G LN+ E H L ++ +Q+
Sbjct: 997 FRTVFYG---LNR-EGKHDLARIALQK 1019
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 161/372 (43%), Gaps = 14/372 (3%)
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y ++ I NLD + EM+K+ + D+ + +I+ ++ +G ++F++M+
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G +D Y ++ S + + K+++ G L Y L++ + K +
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 426 KAHKLFQ--VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
+ V I E E D LL + + +++ +L+++++ +D A++
Sbjct: 312 VVQSIADDMVRICEISEHDAFGY--LLKSFCVSGKIKEALELIRELKNKEM-CLD--AKY 366
Query: 484 FSIFVE----KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEING 539
F I V+ + ALE+ +K + ++Y I++ + ++ KAL F+ I
Sbjct: 367 FEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKK 426
Query: 540 ANLKPDSFSYSIAILCHV-DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
+ P +Y+ I+ H+ L + ++ C N++IE P A + G +
Sbjct: 427 SGRPPRVSTYT-EIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 599 EAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
EA V + P YS+ V C+S+ +++I + N+M + + S V
Sbjct: 486 EAWK-VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWV 544
Query: 659 ISGMCKYGTIEE 670
IS M K G E+
Sbjct: 545 ISSMEKNGEKEK 556
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 151/375 (40%), Gaps = 7/375 (1%)
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+KD V Y T+++ ++ L EM+ G D + L+ + K+
Sbjct: 181 QKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKI 240
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
G G + + + SG+ D YN +I LC + + A + ++ +++G+ + K L
Sbjct: 241 GKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML 300
Query: 450 LVLYAEAKRMENFYKLLQQMEKL-GFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
L A++++++ + M ++ D F ALE+ LK K
Sbjct: 301 LDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEM 360
Query: 509 -VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ + IL+ L + M AL + D + L DS Y I I ++ ++ +A E
Sbjct: 361 CLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYLRQNDVSKALE 419
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
I + P ++ Y + + L K+ + ++ L + + N P + V
Sbjct: 420 QFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE-PDSVAITAVVAGH 478
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTES 687
N + V + M ++G P S + +C+ +E K+F+ + K++
Sbjct: 479 LGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRD 538
Query: 688 DTIVYDEFLIDHMKK 702
D + +I M+K
Sbjct: 539 DIFSW---VISSMEK 550
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 159/325 (48%), Gaps = 3/325 (0%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
+P+ V +++ Q++P L+ + F +A +Q + H+ +S+ + R + D +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAK 109
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI-RT 246
S G P + + F LI+++++A +V + KM +F P+ NRI+D L+
Sbjct: 110 HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKML-EFNFTPQPKHLNRILDVLVSHR 168
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G+L A ++ + G+ ++ +L++ C + ++ G+M E+ PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
+L++ +G ++G + + ++M PD ++Y T++ L ++ E Y L MK
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK 426
KG D Y +++ F ++ +L D++S+G + Y LI GLC+ F++
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDE 348
Query: 427 AHKLFQVTIQEGLEPDFLSVKPLLV 451
K + I +G P F SV LV
Sbjct: 349 GKKYLEEMISKGFSPHF-SVSNCLV 372
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 1/252 (0%)
Query: 191 QGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLD 250
G P+ + + +L++ Y ++ KM + V P V Y ++ R G ++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER-DVVPDVDSYKILIQGFCRKGQVN 242
Query: 251 LALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLV 310
A+ + DD G +R+++ L+ LC+ ++ E ++L RM+ K C PD+ Y ++
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
+ +V ++M + P+ ++Y T+I GL + G +EG +EM SKG
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
++ LV+ F + KV D+++ ++ +G + +I +CN ++ EK
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 422
Query: 431 FQVTIQEGLEPD 442
+ ++E + D
Sbjct: 423 LEDAVKEEITGD 434
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 465 LLQQMEKLGFPVIDDLARFF-SIFVEKKGPIMALEVFSYLKEKGYVSVDIY-NILMDSL- 521
+L + G+P+ ++ + ++ E K P L F + E + + N ++D L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 522 -HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
H+ G ++KA LF + P++ SY++ + ++ A + K++E +P
Sbjct: 166 SHR-GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPD 224
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
+ +YK L +G C+ G+++ AM L+ D L N P Y+ + C+ + +L
Sbjct: 225 VDSYKILIQGFCRKGQVNGAMELLDDML-NKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 283
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
M +GC P V + +I G C+ +ARKV ++
Sbjct: 284 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 129/316 (40%), Gaps = 10/316 (3%)
Query: 383 FVAVNKVGAG--FDLLKDLV----SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
+ + K+G G F+L+ D++ SSGY I+ LI+ EK F ++
Sbjct: 88 LILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLE 147
Query: 437 EGLEPDFLSVKPLL-VLYAEAKRMENFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPI 494
P + +L VL + ++ ++L + G P F
Sbjct: 148 FNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLS 207
Query: 495 MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+A ++F + E+ V VD Y IL+ + G++ A+ L D++ PD SY+ +
Sbjct: 208 IAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLL 267
Query: 554 LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTS 613
++++A + ++ C P + Y + G C+ +A ++ D L N S
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCS 327
Query: 614 GPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARK 673
P Y + C ++ L EM+ +G P V + ++ G C +G +EEA
Sbjct: 328 -PNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACD 386
Query: 674 VFSNLRERKLLTESDT 689
V + + SDT
Sbjct: 387 VVEVVMKNGETLHSDT 402
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 169/436 (38%), Gaps = 42/436 (9%)
Query: 251 LALSVYD-DFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
LA ++D ++ R + ++L+ L + + + +VL + R +T L
Sbjct: 66 LAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYL 125
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL-SNGGRVEEGYVLFKEMKSKG 368
+++ + L + +M + P I+ L S+ G +++ + LFK + G
Sbjct: 126 IKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHG 185
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
+ + Y L+++F + + + L ++ D+ Y LI+G C + A
Sbjct: 186 VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM 245
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV 488
+L + +G PD LS LL ++ YKLL +M+ G DL
Sbjct: 246 ELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG--CNPDLVH------ 297
Query: 489 EKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
YN ++ + A + D++ P+S S
Sbjct: 298 -------------------------YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL 608
Y I D G + + ++I P + CL KG C G+++EA +V +
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 392
Query: 609 GNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKY--G 666
N + + + + + C +++EK+ L + +++ G+ V G+ Y
Sbjct: 393 KNGETLHSD-TWEMVIPLICNEDESEKIKLFLEDAVKEEI-TGDTRIVDVGIGLGSYLSS 450
Query: 667 TIEEARKVFSNLRERK 682
++ RK N RER+
Sbjct: 451 KLQMKRK---NARERR 463
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 140/336 (41%), Gaps = 21/336 (6%)
Query: 245 RTGHLDLALSV----YDDFKEDGLDEERVT--------FMVLVKGLCQAGRIDEMLEVLG 292
R+ HL L L + Y + +D L + R + F L+K +A +++L
Sbjct: 84 RSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFY 143
Query: 293 RMREKLCRPDVFAYTVLVRILVP-QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
+M E P ++ +LV +G L +++ + V P+ +Y ++
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+ Y LF +M + + D Y L++ F +V +LL D+++ G+ D Y
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY 263
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
L+ LC + +A+KL +G PD + +++ + R + K+L M
Sbjct: 264 TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLS 323
Query: 472 LGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE---KGYVS-VDIYNILMDSLHKVGEM 527
G R + +G M E YL+E KG+ + N L+ G++
Sbjct: 324 NGCSPNSVSYRTLIGGLCDQG--MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 528 KKALSLFDEI--NGANLKPDSFSYSIAILCHVDLGE 561
++A + + + NG L D++ I ++C+ D E
Sbjct: 382 EEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 192/435 (44%), Gaps = 34/435 (7%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
GVK V+ +++ L R G ++ + + +F G+ E T+ ++ + +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
VL M++ + YT+L+ + V G + ++++EM++ +E DV Y ++I+
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
G ++ ++LF E+ KG YG+L++ V ++GA L+ ++ S G
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
++N LI+G C ++A ++ V Q+G + D + + + KR + + L
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 468 QMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEM 527
+M + G + L SY L+D K G +
Sbjct: 459 RMMEGG---------------------VKLSTVSYTN------------LIDVYCKEGNV 485
Query: 528 KKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
++A LF E++ ++P++ +Y++ I + G+IK+A + + P Y L
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 588 TKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG 647
G C +DEAM L + +G Y++ + K+ +++ G+ +EM ++G
Sbjct: 546 IHGECIADNVDEAMRLFSE-MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 648 CPPGNVVCSAVISGM 662
N V +A+I M
Sbjct: 605 YTIDNKVYTALIGSM 619
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 144/337 (42%), Gaps = 8/337 (2%)
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
K+ K GV Y +M+ ++ G + A ++D+ +E G++ + + L+ C+
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
G + + + EK P + Y L+ + G + + EM+ V + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
T+I G G V+E +++ M+ KG D ++ F + + L ++
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
G + Y NLI+ C E+A +LF +G++P+ ++ ++ Y + +++
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKK----GPIMALEVFSYLKEKGYVSVDI-YNI 516
KL ME G +D + ++ + + A+ +FS + KG + Y +
Sbjct: 523 ARKLRANMEANG---MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
++ L K G+ +A L+DE+ D+ Y+ I
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 182/446 (40%), Gaps = 11/446 (2%)
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
G +E L V M +K D + V + + +D CL ++ M V+ V +
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
++ GL G VE+ L KE KG + Y +++ ++V +LK +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
G + Y L+E K A KLF + G+E D L+ M+
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF-SYLKEKGY-VSVDIYNILMD 519
+ L ++ + G V K G + A E+ + ++ KG ++ ++N L+D
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ G + +A ++D + + D F+ + C L +A + +++E
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
S +Y L CK G ++EA L + + + P Y++ + CK ++ +
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVE-MSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDH 699
M G P + +++I G C ++EA ++FS + + L + +++ Y +
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL--DQNSVTYTVMISGL 584
Query: 700 MKKKTADLVMSGLKFFGLESKLKSKG 725
K +D + FGL ++K KG
Sbjct: 585 SKAGKSD------EAFGLYDEMKRKG 604
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+QKG+ + + N A C NR + A Q M G S + LI ++ G
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
++ +M +K GV+P YN ++ A + G + A + + + +G+D + T+
Sbjct: 486 EEAKRLFVEMSSK-GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ G C A +DE + + M K + YTV++ L G D +++EMK+
Sbjct: 545 LIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Query: 334 VEPDVMAYATIITGL 348
D Y +I +
Sbjct: 605 YTIDNKVYTALIGSM 619
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 153/334 (45%), Gaps = 3/334 (0%)
Query: 144 LSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEIL 203
L+++FF W+ +Q+ + H SY+ ++A +L + M G P + + F +L
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL 190
Query: 204 IRMHSDAGRGLRVYHVYEKMRNK-FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
I +AG L V + M++K F +P YN I+++L+ L VY ED
Sbjct: 191 ICSCGEAG--LAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED 248
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
G + +T+ +L+ + G++D + M PD + Y +L+ IL
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
L MK+ ++P V+ Y T+I GLS G +E EM G D Y ++
Sbjct: 309 LTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+V ++ ++ +++ G ++ YN++I GLC +F +A L + G P+
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
F+ L+ +A ++ K++++M K G V
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYV 462
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 150/382 (39%), Gaps = 74/382 (19%)
Query: 296 EKLC-RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
E+ C R V +Y +L++I G R+ +EM +D + +I G
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLA 200
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
++ V F MKSK + YR YN +
Sbjct: 201 KQAVVQF--MKSK---------------------------------TFNYRPFKHSYNAI 225
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
+ L + +++ +++ +++G PD L+ LL +M+ F +L +M + GF
Sbjct: 226 LNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 475 -PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALS 532
P I + P+ AL +++KE G SV Y L+D L + G ++
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
DE+ A +PD Y++ I +V GE+ +A E ++ +P++ Y + +GLC
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Query: 593 KIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGN 652
GE EA L L EM +GC P
Sbjct: 406 MAGEFREACWL------------------------------------LKEMESRGCNPNF 429
Query: 653 VVCSAVISGMCKYGTIEEARKV 674
VV S ++S + K G + EARKV
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKV 451
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 1/245 (0%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
SYNA + ++ + + + M G P + IL+ + G+ R ++++M
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
G P + YN ++ L + AL+ + KE G+D + + L+ GL +AG
Sbjct: 281 ARD-GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGN 339
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
++ L M + CRPDV YTV++ V G LD ++ EM P+V Y +
Sbjct: 340 LEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
+I GL G E L KEM+S+G + +Y +LV K+ +++++V G
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 404 YRADL 408
+ L
Sbjct: 460 HYVHL 464
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/580 (21%), Positives = 217/580 (37%), Gaps = 115/580 (19%)
Query: 144 LSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEIL 203
LS KF + +GY + +S+N+ + + + A+ + M G P + L
Sbjct: 39 LSLKFLAYL-VSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSL 97
Query: 204 IRMHSDAGRGLRVYHVYEKMRNKFG----------------------------------- 228
I H G V E +R G
Sbjct: 98 IDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK 157
Query: 229 -VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
P V Y+ +D ++G L LAL + K D L VTF L+ G C+AG ++
Sbjct: 158 CCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ + MR +V YT L+ +G + ++ M +DRVEP+ + Y TII G
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
G + +M ++G +D YG ++ K+ ++++D+ S D
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ I+ ++ + + A ++ I+ G EPD +++ +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM------------------ 379
Query: 468 QMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEM 527
ID +A K G + V+ +++ V +Y +L+D+L K G+
Sbjct: 380 ---------IDGIA--------KNGQLHEAIVYFCIEKANDV---MYTVLIDALCKEGDF 419
Query: 528 KKALSLFDEINGANLKPDSFSYS--IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+ LF +I+ A L PD F Y+ IA LC G + A + ++++ + + AY
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCK--QGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
L GL G + EA V +EM+
Sbjct: 478 TLIYGLASKGLMVEARQ------------------------------------VFDEMLN 501
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
G P + V +I K G + A + +++ R L+T
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVT 541
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 209/500 (41%), Gaps = 79/500 (15%)
Query: 190 SQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
S+G P F ++ G+ + M +FG +P V YN ++D R G +
Sbjct: 49 SRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMP-RFGCEPDVISYNSLIDGHCRNGDI 107
Query: 250 DLALSVYDDFKEDG---LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
A V + + + V+F L G + +DE+ +G M K C P+V Y
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTY 166
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
+ + G L L+ + MK+D + P+V+ + +I G G +E L+KEM
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-- 224
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK 426
R + SL ++ Y LI+G C + ++
Sbjct: 225 ------RRVRMSL---------------------------NVVTYTALIDGFCKKGEMQR 251
Query: 427 AHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI 486
A +++ +++ +EP+ L ++ + + +N K L +M G
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG------------- 298
Query: 487 FVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
M L++ +Y +++ L G++K+A + +++ ++L PD
Sbjct: 299 --------MRLDITAY------------GVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
++ + + G +K A ++K+IE P + A + G+ K G++ EA +V
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYF 396
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
C+ + MY++ + CK D +V + +++ + G P + ++ I+G+CK G
Sbjct: 397 CIEKAN----DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 667 TIEEARKVFSNLRERKLLTE 686
+ +A K+ + + + LL +
Sbjct: 453 NLVDAFKLKTRMVQEGLLLD 472
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 147/353 (41%), Gaps = 7/353 (1%)
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
V E ++ +L D + + N L LVS GY +N+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL- 472
++ +C L + + A + + G EPD +S L+ + + + +L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 473 GFPVIDDLARFFSIFVEKKGPIMALEVFSYLK---EKGYVSVDIYNILMDSLHKVGEMKK 529
GF D+ F S+F M EVF Y+ + +V Y+ +D+ K GE++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
AL F + L P+ +++ I + G+++ A + ++ + ++ Y L
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
G CK GE+ A + + + P +Y+ + + D++ + L +M+ QG
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVE-PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
+ISG+C G ++EA ++ ++ + L+ D +++ + + K
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV--PDMVIFTTMMNAYFKS 351
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 206/498 (41%), Gaps = 26/498 (5%)
Query: 127 VTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPE 186
++ + V + L++ P +FF W KG+ H S+ + R + A
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 187 LMDSQGK---PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
++ + ++ F LIR + +AG +++ M+ + G+ P V +N ++ L
Sbjct: 125 SIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK-QMGISPSVLTFNSLLSIL 183
Query: 244 IRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
++ G +A ++D+ + G+ + TF L+ G C+ +DE + M C PD
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEM--KKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
V Y ++ L G + V M K V P+V++Y T++ G ++E ++
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG------YRADLGIYNNL 414
F +M S+G + Y +L++ ++ +D +KD++ G + D +N L
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHR----YDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL---LVLYAEAKRMENFYKLLQQMEK 471
I+ C+ + A K+FQ + L PD S L L + E R E + L + E
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEV 419
Query: 472 L-----GFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGE 526
L P+ F A +VF L ++G Y L+ + G+
Sbjct: 420 LLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK 479
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
K A L + PD +Y + I + +GE A + +++ S +P +
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS 539
Query: 587 LTKGLCKIGEIDEAMMLV 604
+ L K +E+ LV
Sbjct: 540 VLAELAKRKFANESFCLV 557
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 184/448 (41%), Gaps = 74/448 (16%)
Query: 287 MLEVLGRMRE-KLCRPDVFA---------------YTVLVRILVPQGNLDGCLRVWEEMK 330
MLE LGR R + R +F+ + L+R G +++++ MK
Sbjct: 106 MLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK-SKGHLIDRAIYGSLVESFVAVNKV 389
+ + P V+ + ++++ L GR + LF EM+ + G D + +L+ F + V
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMV 225
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
F + KD+ D+ YN +I+GLC K + AH + +++ + V P
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATD-----VHPN 280
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
+V Y R Y + Q++++ D L+R LK
Sbjct: 281 VVSYTTLVRG---YCMKQEIDEAVLVFHDMLSR-------------------GLKPNAVT 318
Query: 510 SVDIYNILMDSL---HKVGEMKKALSLFDEING----ANLKPDSFSYSIAILCHVDLGEI 562
YN L+ L H+ E+K L I G PD+ +++I I H D G +
Sbjct: 319 ----YNTLIKGLSEAHRYDEIKDIL-----IGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD------CLGNVTSGPM 616
A + +++ M P A+Y L + LC E D A L + LG P+
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGC--PPGNVVCSAVISGMCKYGTIEEARKV 674
Y+ + C + ++ V ++M++G PP +I+G C+ G + A ++
Sbjct: 430 AAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSY---KTLITGHCREGKFKPAYEL 486
Query: 675 FSNLRERKLLTESDTIVYDEFLIDHMKK 702
+ R+ + + +T E LID + K
Sbjct: 487 LVLMLRREFVPDLETY---ELLIDGLLK 511
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 168/397 (42%), Gaps = 18/397 (4%)
Query: 153 EKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDA 210
+K H N SY YCM + A + M S+G P+ + LI+ S+A
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDE--AVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 211 GRGLRVYHVYEKMRNKFGV-KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
R + + + F P +N ++ A GHLD A+ V+ + L +
Sbjct: 330 HRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSA 389
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKL-------CRPDVFAYTVLVRILVPQGNLDGC 322
++ VL++ LC D + + EK C+P AY + L G
Sbjct: 390 SYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQA 449
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
+V+ ++ K V+ D +Y T+ITG G+ + Y L M + + D Y L++
Sbjct: 450 EKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDG 508
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ + + D L+ ++ S Y +++++ L ++ L + +++ + +
Sbjct: 509 LLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQN 568
Query: 443 F-LSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFS 501
LS + + +L++ A++ E + +++ + G+ V + E + + A +
Sbjct: 569 IDLSTQVVRLLFSSAQK-EKAFLIVRLLYDNGYLV--KMEELLGYLCENRKLLDAHTLVL 625
Query: 502 YLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEI 537
+ EK V +D N +++ L K +A SL++E+
Sbjct: 626 FCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNEL 662
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 198/453 (43%), Gaps = 9/453 (1%)
Query: 111 YKWGPPVVTELSKLRRVTPSLV--AEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAF 168
+KWGP + T+L KL+ V P++V + LK+ + F WA+KQ Y + Y
Sbjct: 153 WKWGPELETQLDKLQFV-PNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVL 211
Query: 169 AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEI---LIRMHSDAGRGLRVYHVYEKMRN 225
+N+ L E M + F +I+ + A + L V K
Sbjct: 212 FDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEK-LEVAFCCFKKAQ 270
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ G K YN +M + G A +Y+ ++ + T+ +++ L ++GR+D
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLD 330
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
++ +M+E+ RP ++ LV + G LD ++V+ EM+ P + ++I
Sbjct: 331 AAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
+ G+++ L+ EMK G + +Y ++ES K+ + KD+ +G+
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
Y+ L+E + + A K++ GL P S LL L A + ++ K+
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKI 510
Query: 466 LQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-IYNILMDSLHKV 524
L +M+ +G+ V + I+++ +AL+ ++ G + + I L +S K
Sbjct: 511 LLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKN 570
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHV 557
G A L + + + K D Y+ +IL H+
Sbjct: 571 GLYDSARPLLETLVHSAGKVDLVLYT-SILAHL 602
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 157/388 (40%), Gaps = 17/388 (4%)
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV---EPDVMAYATIITGLSNGGRVEEG 357
P Y VL L + G ++EEM +D + AY +I L+ ++E
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+ FK+ + G ID Y +L+ F+ F++ + + + D Y +I
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PV 476
L + + A KLFQ + L P F L+ +A R++ K+ +M+ G P
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFD 535
+ + AL ++ +K+ G+ + +Y ++++S K G+++ A+++F
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 536 EINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
++ A P +YS + H G++ A + +N + P +++Y L L
Sbjct: 443 DMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Query: 596 EIDEA--MMLVRDCLG---NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
+D A ++L +G +V + + +Y K + + L M G
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLMIY-------IKDASVDLALKWLRFMGSSGIKT 555
Query: 651 GNVVCSAVISGMCKYGTIEEARKVFSNL 678
N + + K G + AR + L
Sbjct: 556 NNFIIRQLFESCMKNGLYDSARPLLETL 583
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/564 (20%), Positives = 237/564 (42%), Gaps = 9/564 (1%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
R+ P L+ E L + L F W + QK Y YN R+N A L
Sbjct: 107 RKNFPVLIRE-LSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGL 165
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
M P + ++ LI H AG+ ++ + M + + P YN +++A
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML-RAAIAPSRSTYNNLINACG 224
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
+G+ AL V ++G+ + VT +++ + + L M+ RPD
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 284
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVE--PDVMAYATIITGLSNGGRVEEGYVLFK 362
+ +++ L G L ++ M++ R E PDV+ + +I+ S G +E +F+
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
M ++G + Y +L+ ++ G +L D+ +G D+ Y L+
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLA 481
+ KA ++F + +E +P+ ++ L+ Y + ++ +QME+ G P + +
Sbjct: 405 QPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVC 464
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGA 540
+ K + V S + +G ++ YN + S E++KA++L+ +
Sbjct: 465 TLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
+K DS +++I I + + +A ++ ++S + Y + K G++ EA
Sbjct: 525 KVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Query: 601 MMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE-KVIGVLNEMMQQGCPPGNVVCSAVI 659
+ + P Y+ +++HA +++ K + EM G P ++ CSA++
Sbjct: 585 ESIFNQ-MKMAGCEPDVIAYT-SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 660 SGMCKYGTIEEARKVFSNLRERKL 683
K G + +RE+++
Sbjct: 643 RAFNKGGQPSNVFVLMDLMREKEI 666
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 201/487 (41%), Gaps = 56/487 (11%)
Query: 130 SLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCM---NRNNHHRAAD-QLP 185
SLV VL + +FF W E+ H+ ++ + ++ NH R +P
Sbjct: 118 SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMP 177
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E +G P E F +LI + AG +++KM++ GV+ + YN + ++R
Sbjct: 178 E----KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD-LGVERTIKSYNSLFKVILR 232
Query: 246 TGH-----------------------------------LDLALSVYDDFKEDGLDEERVT 270
G L+ AL ++D K G+ + T
Sbjct: 233 RGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
F ++ G C+ ++DE ++ M+ P V +YT +++ + +D LR++EEM+
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMR 352
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI--DRAIYGSLVESFVAVNK 388
+EP+ Y+T++ GL + G++ E + K M +K H+ D +I+ L+ S
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK-HIAPKDNSIFLKLLVSQSKAGD 411
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI--------QEGLE 440
+ A ++LK + + A+ G Y LIE C + + +A KL I Q+ LE
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 441 PDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
+ + P++ + L +Q+ K G D L ++ P + E+
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEIL 531
Query: 501 SYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
+ +G + Y +L+ S GE A + D + PDS + I +
Sbjct: 532 KIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Query: 560 GEIKQAC 566
G ++ A
Sbjct: 592 GRVQTAS 598
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 194/463 (41%), Gaps = 41/463 (8%)
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+++ L L+ A + D E G+ + F+VL++ +AG + E +++ +M++
Sbjct: 155 KMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDL 214
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
+ +Y L ++++ +G R + +M + VEP Y ++ G R+E
Sbjct: 215 GVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETA 274
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
F++MK++G D A + +++ F K+ L ++ + + Y +I+G
Sbjct: 275 LRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
+++ + ++F+ G+EP+ + LL +A +M +L+ M
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPK 394
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI----YNILMDSLHKVGEMKKALSL 533
D+ + F + V + LK ++V Y +L+++ K +A+ L
Sbjct: 395 DN-SIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKL 453
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP-SIAAYKCLTKGLC 592
D + + IL H D E++ + +N IIE C A + L + L
Sbjct: 454 LDTLIEKEI----------ILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLM 501
Query: 593 KIGEIDEAMM--LVRDCLGNVTSGPMEFMYSLTVIHACK-----SNDAEKVI-------- 637
K G D+ + L+R G+ G + Y + I + + SN E +I
Sbjct: 502 KRGVQDQDALNNLIR---GHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGE 558
Query: 638 -----GVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
L+ M++ G P + + +VI + + G ++ A +V
Sbjct: 559 PGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVM 601
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 158/391 (40%), Gaps = 14/391 (3%)
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E M S G P+ + L+ DAG+ + ++ + M K ++ +++ + +
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSK 408
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK---LCRPD 302
G + A V + E + VL++ C+A + +++L + EK L D
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQD 468
Query: 303 VF-----AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
AY ++ L G ++ ++ K V+ D A +I G + G +
Sbjct: 469 TLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSS 527
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
Y + K M +G + Y L++S+++ + G L +V G+ D ++ ++IE
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIES 587
Query: 418 LCNLNKFEKAHKLFQVTIQE--GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
L + + A ++ + I + G+E + + +L +E + + + G
Sbjct: 588 LFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHT 647
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSY-LKEKGYVSVDIYNILMDSLHKVGEMKKALSLF 534
DL S+ EK I AL++ + L+ + Y+ ++D+L G+ A S+
Sbjct: 648 A--DLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVL 705
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
+I D S I G KQA
Sbjct: 706 CKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/501 (22%), Positives = 211/501 (42%), Gaps = 54/501 (10%)
Query: 138 VQTNPTLSFKFFH-----WAEKQKGYHHNF---ASYNAFAYCMNRNNHHRAADQLPELMD 189
++ P++S H W QK Y A +N Y + + D+L L +
Sbjct: 53 IERPPSISGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKS-----SLDRLASLRE 107
Query: 190 SQGKPPSEKQFEILIRMHS------------DAGRGLRVYHVYEKMRNKFGVKPRVFLYN 237
S + S ++ + +HS DA LR +Y GV P + +N
Sbjct: 108 SVCQTKSF-DYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYS------GVIPGLITHN 160
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+++ L + G+++ A + + +E G V++ L+KGLC +D+ L + M +
Sbjct: 161 HLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKY 220
Query: 298 LCRPDVFAYTVLVRILVPQGNL-DGCLRVWEEM---KKDRVEPDVMAYATIITGLSNGGR 353
RP+ ++V L +G + + ++ EE+ + D++ ++ G
Sbjct: 221 GIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGN 280
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
V + ++KEM K D +Y ++ + + A + + D+V G D+ YN
Sbjct: 281 VVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNT 340
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL---LVLYAEAKRMENFYKLLQQME 470
LI LC KF++A L G+ PD +S K + L ++ + R F + +
Sbjct: 341 LISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSS 400
Query: 471 K-----LGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY--NILMDSLHK 523
L VID R+ AL V + + G V ++Y N L+ K
Sbjct: 401 LLPEVLLWNVVIDGYGRY-------GDTSSALSVLNLMLSYG-VKPNVYTNNALIHGYVK 452
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
G + A + +E+ + PD+ +Y++ + LG ++ A + +++++ C P I
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 584 YKCLTKGLCKIGEIDEAMMLV 604
Y L +GLC G + +A L+
Sbjct: 513 YTELVRGLCWKGRLKKAESLL 533
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 5/290 (1%)
Query: 171 CMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVK 230
C N +A + E M + P + ++IR +G + Y M K GV
Sbjct: 275 CFKNGNVVQALEVWKE-MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV-KRGVN 332
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P VF YN ++ AL + G D A ++ + G+ +++++ V+++GLC G ++ E
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
L M + P+V + V++ G+ L V M V+P+V +I G
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
GGR+ + + + EM+S D Y L+ + + + F L +++ G + D+
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
Y L+ GLC + +KA L G+ D + P L+L + R++
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGITIDHV---PFLILAKKYTRLQ 559
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 129/295 (43%), Gaps = 3/295 (1%)
Query: 184 LPELMDS-QGKPPSEKQF-EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMD 241
L E++DS Q P + IL+ G ++ V+++M K V +YN I+
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQK-NVPADSVVYNVIIR 308
Query: 242 ALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
L +G++ A D + G++ + T+ L+ LC+ G+ DE ++ G M+ P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D +Y V+++ L G+++ M K + P+V+ + +I G G +
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVL 428
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
M S G + +L+ +V ++ + + ++ S+ D YN L+ C L
Sbjct: 429 NLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTL 488
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
A +L+ ++ G +PD ++ L+ R++ LL +++ G +
Sbjct: 489 GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR---MHSDAG 211
++G + + +YN + + A L M + G P + ++++I+ +H D
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
R + + K + P V L+N ++D R G ALSV + G+ T
Sbjct: 388 RA----NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTN 443
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
L+ G + GR+ + V MR PD Y +L+ G+L ++++EM +
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
+PD++ Y ++ GL GR+++ L +++ G ID + L + + + + G
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Query: 392 GFDLLKDLVSSGYRA 406
+ + K +++ R
Sbjct: 564 AYLVYKKWLATRNRG 578
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 114/306 (37%), Gaps = 42/306 (13%)
Query: 374 AIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
+I+ S++ K+ A L K ++ SG L +N+L+ GLC EKA L +
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGP 493
+ G P+ +S L+ ++ L M K G + +KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 494 I------MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
I + E+ + + + I ILMDS K G + +AL ++ E++ N+ DS
Sbjct: 242 IGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
Y++ I +GLC G + A + D
Sbjct: 302 VYNVII-----------------------------------RGLCSSGNMVAAYGFMCDM 326
Query: 608 LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGT 667
+ + P F Y+ + CK ++ + M G P + +I G+C +G
Sbjct: 327 VKRGVN-PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 668 IEEARK 673
+ A +
Sbjct: 386 VNRANE 391
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDL-------GEIKQACECHNKIIEMSCIP 579
+K +L + + + SF Y + H + G++ A K+I IP
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
+ + L GLCK G I++A LVR+ + + P Y+ + C N+ +K + +
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVRE-MREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARK 673
N M + G P V C+ ++ +C+ G I K
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK 247
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 220/538 (40%), Gaps = 13/538 (2%)
Query: 102 ILDAFRKNGYKWGP--PVVTEL-SKLRRVTPSLVAEVLKVQTNPTL--SFKFFHWAEKQK 156
ILD F K G W V+ E+ SK + + VL L K F K
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
GY +YNA + + A + + M+ P + L+ + AG
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
V E M K GV P Y ++DA + G D AL ++ KE G T+ ++
Sbjct: 371 AGVIEMMTKK-GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
L + R +EM+++L M+ C P+ + ++ + +G RV+ EMK EP
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
D + T+I+ G + ++ EM G Y +L+ + +G +++
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG-LEPDFLSVKPLLVLYAE 455
D+ S G++ Y+ +++ + ++ + I+EG + P ++ ++ LL+ +
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI-ENRIKEGQIFPSWMLLRTLLLANFK 608
Query: 456 AKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI- 513
+ + + +K G+ P + SIF A + ++E G +S D+
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDG-LSPDLV 667
Query: 514 -YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
YN LMD + GE KA + + + LKPD SY+ I G +++A +++
Sbjct: 668 TYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
E P I Y G +G E ++ +C+ P E + + V C++
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI-ECMAKNDCRPNELTFKMVVDGYCRA 784
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/562 (21%), Positives = 216/562 (38%), Gaps = 71/562 (12%)
Query: 158 YHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR-V 216
Y + +Y + +R + A L E M G P+ + +++ + GR R +
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI 265
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
V ++MR+K G+K F + ++ A R G L A + + K G + VT+ L++
Sbjct: 266 LGVLDEMRSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
+AG E L VL M E C D Y LV V G V E M K V P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+ + Y T+I G+ +E LF MK G + + Y +++ ++ +L
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEK-AHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
D+ S+G + +N ++ LC +K +++F+ G EPD + L+ Y
Sbjct: 445 CDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
+ K+ +M + GF V YN
Sbjct: 504 CGSEVDASKMYGEMTRAGFNAC---------------------------------VTTYN 530
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
L+++L + G+ + ++ ++ KP SYS+ + C+ G N+I E
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590
Query: 576 SCIPS--------IAAYKCLT-------------KGLCKIGEIDEAMM--LVRDCLGNVT 612
PS +A +KC G I +M+ R+ + +
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 613 SGPMEFM-----------YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISG 661
G +E + Y+ + + + K +L + + P V + VI G
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 662 MCKYGTIEEARKVFSNLRERKL 683
C+ G ++EA ++ S + ER +
Sbjct: 711 FCRRGLMQEAVRMLSEMTERGI 732
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 16/399 (4%)
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
LC+ +V VLV +V Q L G R ++ +K + + D++ +++ GL + G E
Sbjct: 104 LCKKEV----VLVNSIVEQP-LTGLSRFFDSVKSELLRTDLV---SLVKGLDDSGHWERA 155
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAV----NKVGAGFDLLKDLVSSGYRADLGIYNN 413
LF+ + + + ++E FV + ++ LL + Y D+ Y
Sbjct: 156 VFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTT 215
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR-MENFYKLLQQMEKL 472
++ K+EKA LF+ + G P ++ +L ++ + R +L +M
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 473 GFPVIDDLARFFSIFVEKKGPIM-ALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKA 530
G + ++G + A E F+ LK GY + YN L+ K G +A
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
LS+ E+ + DS +Y+ + +V G K+A + + +P+ Y +
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 591 LCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
K G+ DEA+ L + P Y+ + K + + ++I +L +M GC P
Sbjct: 396 YGKAGKEDEALKLFYS-MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 651 GNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ +++ G + +VF ++ + DT
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/362 (17%), Positives = 133/362 (36%), Gaps = 39/362 (10%)
Query: 154 KQKGYHHNFASYNA-FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR 212
K G N A++N A C N+ + +++ M S G P F LI + G
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
+ +Y +M + G V YN +++AL R G +V D K G ++
Sbjct: 507 EVDASKMYGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKL-----------------CR--------------- 300
++++ + G + + R++E CR
Sbjct: 566 LMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 301 ---PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
PD+ + ++ I D + E +++D + PD++ Y +++ G +
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+ K ++ D Y ++++ F + +L ++ G R + YN + G
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
+ F + + + + P+ L+ K ++ Y A + + +++ P
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD-PCF 804
Query: 478 DD 479
DD
Sbjct: 805 DD 806
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 168/432 (38%), Gaps = 50/432 (11%)
Query: 256 YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM----REKLCRPDVFAYTVLVR 311
+D K + L R + LVKGL +G + + + + + D + VR
Sbjct: 127 FDSVKSELL---RTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVR 183
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
IL + ++ +++ DV AY TI+ S G+ E+ LF+ MK G
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 372 DRAIYGSLVESFVAVNKVGAGF----DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
Y +++ F K+G + +L ++ S G + D + ++ +A
Sbjct: 244 TLVTYNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA 300
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF 487
+ F G EP ++ LL ++ +A +L++ME+ P D +
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA-DSVT------ 353
Query: 488 VEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
YN L+ + + G K+A + + + + P++
Sbjct: 354 --------------------------YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
+Y+ I + G+ +A + + E C+P+ Y + L K +E + ++ D
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 608 LGNVTSGPMEFMYSLTVIHACKSNDAEKVIG-VLNEMMQQGCPPGNVVCSAVISGMCKYG 666
N S P ++ T++ C + +K + V EM G P + +IS + G
Sbjct: 448 KSNGCS-PNRATWN-TMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 667 TIEEARKVFSNL 678
+ +A K++ +
Sbjct: 506 SEVDASKMYGEM 517
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 208/510 (40%), Gaps = 20/510 (3%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS-----DAGRGLRVYH 218
+YNA RNN A L M G + ++I+ + D+ LR+Y
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
E+ + + V+ L N I+ ++G AL + + GL + T + ++ L
Sbjct: 259 EIERDKLELDVQ----LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
+GR E + +R+ +P AY L++ V G L + EM+K V PD
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
Y+ +I N GR E ++ KEM++ + ++ L+ F + F +LK+
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
+ S G + D YN +I+ N + A F + EG+EPD ++ L+ + + R
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 459 MENFYKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIMALE----VFSYLKEKGYV-SVD 512
++ + ME+ G P A ++I + G + + +K +G + +V
Sbjct: 495 HIVAEEMFEAMERRGCLPC----ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
+ L+D K G A+ +E+ LKP S Y+ I + G +QA +
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM 610
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
PS+ A L + EA +++ N P Y+ + + +
Sbjct: 611 TSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK-PDVVTYTTLMKALIRVDK 669
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
+KV V EM+ GC P S + S +
Sbjct: 670 FQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 188/471 (39%), Gaps = 47/471 (9%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
GR ++Y + + K + P YN ++ A R ++ AL++ ++DG + V
Sbjct: 178 GRSEKLYEAF-LLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVN 234
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ ++++ L ++ +ID ++ LR+++E++
Sbjct: 235 YSLVIQSLTRSNKIDSVM---------------------------------LLRLYKEIE 261
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
+D++E DV II G + G + L ++ G A S++ + +
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
L ++L SG + YN L++G + A + + G+ PD + L+
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 451 VLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
Y A R E+ +L++ME P +R + F ++ +V +K G V
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG-V 440
Query: 510 SVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
D YN+++D+ K + A++ FD + ++PD +++ I CH G A E
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG---PMEFMYSLTV 624
+ C+P Y + D+ ++ LG + S P ++ V
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDD----MKRLLGKMKSQGILPNVVTHTTLV 556
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
KS I L EM G P + + +A+I+ + G E+A F
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLR 215
+G + ++N C ++ H A+++ E M+ +G P + I+I + D R
Sbjct: 473 EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
+ + KM+++ G+ P V + ++D ++G + A+ ++ K GL + L+
Sbjct: 533 MKRLLGKMKSQ-GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
Q G ++ + M +P + A L+ V + MK++ V+
Sbjct: 592 NAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVK 651
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDR 373
PDV+ Y T++ L + ++ V+++EM G DR
Sbjct: 652 PDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 134/618 (21%), Positives = 241/618 (38%), Gaps = 74/618 (11%)
Query: 135 VLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKP 194
+LK Q + + + F W + + Y N YN + + R L + M +G
Sbjct: 160 ILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIK 219
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP----------------------- 231
P + LI ++S G + KM +K G++P
Sbjct: 220 PINSTYGTLIDVYSKGGLKVHALCWLGKM-SKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 232 ------------------RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ YN ++D ++G + A + E+G+ VTF
Sbjct: 279 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ G++ E+ ++ M+ C PD Y +L+ + +++ ++EMK D
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++PD ++Y T++ S VEE L EM ID +L +V + +
Sbjct: 398 LKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW 457
Query: 394 DLLK------DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
K ++ S GY A++ Y +A ++F + QE + +
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYG-------ERGYLSEAERVF-ICCQEVNKRTVIEYN 509
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF---FSIFVEKKGPIMALEVFSYLK 504
++ Y +K E +L + M + + V D + I P ++
Sbjct: 510 VMIKAYGISKSCEKACELFESM--MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 505 EKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIK 563
E GYVS I Y ++ S K+G++ A ++ E+ N++PD Y + I D G ++
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 564 QACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG--NVTSGPMEFMYS 621
QA + E + Y L K K+G +DEA + R L N T P + +
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSN 687
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKY---GTIEEARKVFSNL 678
+ + + K + + M Q+G N A++ +C Y G EEA ++ +
Sbjct: 688 CMINLYSERSMVRKAEAIFDSMKQRG--EANEFTFAMM--LCMYKKNGRFEEATQIAKQM 743
Query: 679 RERKLLTESDTIVYDEFL 696
RE K+LT D + Y+ L
Sbjct: 744 REMKILT--DPLSYNSVL 759
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/442 (18%), Positives = 179/442 (40%), Gaps = 46/442 (10%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P + + ILI +H+ R +++M++ G+KP Y ++ A ++ A
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDD-GLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE----------VLGRMR--------- 295
+ + +D ++ + T L + +A EMLE V G M
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEA----EMLEKSWSWFKRFHVAGNMSSEGYSANID 479
Query: 296 ------------------EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
+++ + V Y V+++ + + ++E M V PD
Sbjct: 480 AYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPD 539
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
Y T++ L++ +G ++M+ G++ D Y +++ SFV + ++ ++ K
Sbjct: 540 KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYK 599
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
++V D+ +Y LI + ++A + + G+ + + L+ LY +
Sbjct: 600 EMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVG 659
Query: 458 RMEN----FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
++ + KLLQ K +P + +++ E+ A +F +K++G +
Sbjct: 660 YLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFT 719
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
+ +++ K G ++A + ++ + D SY+ + G K+A E +++
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Query: 574 EMSCIPSIAAYKCLTKGLCKIG 595
P + +K L L K+G
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLG 801
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 8/320 (2%)
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
K V YN ++ A + + A +++ G+ ++ T+ LV+ L A +
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
L +MRE D Y ++ V G L+ V++EM + +EPDV+ Y +I +
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA--- 406
+ G V++ + MK G + IY SL++ + V + + + L+ S +
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
D+ N +I + KA +F Q G E + + +L +Y + R E ++
Sbjct: 682 DVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIA 740
Query: 467 QQMEKLGFPVIDDLA--RFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-IYNILMDSLHK 523
+QM ++ + D L+ +F A+E F + G D + L L K
Sbjct: 741 KQMREMKI-LTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 524 VGEMKKALSLFDEINGANLK 543
+G KKA+ +EI +K
Sbjct: 800 LGMSKKAVRKIEEIRKKEIK 819
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/547 (21%), Positives = 224/547 (40%), Gaps = 55/547 (10%)
Query: 132 VAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQ 191
V L ++ ++ FF+WA + + H Y A + N + + A ++ M
Sbjct: 97 VVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCM--- 153
Query: 192 GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
+R S+ GR + M+N+ G+ P N +++ + G ++
Sbjct: 154 ------------LRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELGLIEY 200
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
A +V+D+ G+ + ++ ++V G + G+I E L M ++ PD T+++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
L G ++ + + +M +P+++ + ++I GL G +++ + + +EM G
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLV-SSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ + +L++ F L LV S Y+ ++ Y ++I G C +K +A L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF--------PVIDDLA- 481
F ++GL P+ + L+ + +A Y+L+ M GF ID L
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 482 ------------RFFSIFVEKKGPI---------------MALEVFSYLKEKGY-VSVDI 513
+ FS +E G AL F + + G+ + +
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
NIL+ + + +MK++ LF + L P +Y+ I C+ G+I A + + +
Sbjct: 501 NNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
C+P Y L GLCK +DEA L + S P E CK ND+
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP-EVTRVTLAYEYCKRNDS 619
Query: 634 EKVIGVL 640
+ +L
Sbjct: 620 ANAMILL 626
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/550 (18%), Positives = 216/550 (39%), Gaps = 59/550 (10%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR-NKFGVKPR 232
R NH ++ L E+ ++ + S++G + + Y + KF R
Sbjct: 69 RQNHVVSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMR 128
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
++L D+L+ G+L A V +++ + GR++E + ++
Sbjct: 129 LYLVT--ADSLLANGNLQKAHEV---------------MRCMLRNFSEIGRLNEAVGMVM 171
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
M+ + P ++ I V G ++ V++EM V PD +Y ++ G G
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+++E M +G + D A ++ + V + ++ G++ +L +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
+LI+GLC ++A ++ + ++ G +P+ + L+ + E ++L ++ +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 473 GF--PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKK 529
P + + ++ A +FS +KE+G + +V+ Y L++ K G +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
A L + + P+ ++Y+ AI +A E NK Y L +
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSG----------------------------------- 614
CK +I++A+ C N T
Sbjct: 472 EQCKQNDINQALAFF--CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 615 -PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARK 673
P + Y+ + CK D + + + M + GC P + ++ISG+CK ++EA K
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 674 VFSNLRERKL 683
++ + +R L
Sbjct: 590 LYEAMIDRGL 599
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 140/365 (38%), Gaps = 44/365 (12%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEI 202
+F+ F + Y N +Y + YC + + A+ L M QG P+ +
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYC--KEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
LI H AG R Y + M ++ G P ++ YN +D+L
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDE-GFMPNIYTYNAAIDSL------------------- 438
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
C+ R E E+L + D YT+L++ Q +++
Sbjct: 439 ----------------CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
L + M K E D+ +I +++E LF+ + S G + + Y S++
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ + ++ G D Y +LI GLC + ++A KL++ I GL P
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQME-KLGFPVIDDLARFFSIFVEKKGPIMALEVFS 501
++ L Y + N LL+ ++ KL + L R + EKK + AL F
Sbjct: 603 EVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVR--KLCSEKKVGVAAL-FFQ 659
Query: 502 YLKEK 506
L EK
Sbjct: 660 KLLEK 664
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 159/389 (40%), Gaps = 61/389 (15%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
TPS V+ + + +P + F W + + HN SY + L L
Sbjct: 26 TPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYAS----------------LVTL 69
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGR-GLRVYHVYEKMRN------KFGVKPRVFLYNRIM 240
+ SQ P + IL+ ++ R L V MR K+ + P+ YN ++
Sbjct: 70 LCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKC--YNNLL 127
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCR 300
+L R G ++ +Y + ED + + TF LV G C+ G + E + + + + C
Sbjct: 128 SSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCD 187
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEE-------------------------------- 328
PD F YT + + +D +V++E
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 329 ---MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA 385
MK D P+V Y +I L G+ E LFK+M G D +Y L++SF +
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 386 VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
+ + LL+ ++ +G ++ YN LI+G C N KA L +++ L PD ++
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLIT 366
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
L+ + +++ Y+LL ME+ G
Sbjct: 367 YNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 131/300 (43%), Gaps = 45/300 (15%)
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
++L+DLVS D+ +N L+ G C L +A + IQ G +PD+ + + +
Sbjct: 145 EMLEDLVS----PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 454 AEAKRMENFYKLLQQMEKLGF--PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-S 510
K ++ +K+ ++M + G + + +F E K AL + +K+ +
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF-EAKKIDEALSLLVKMKDDNCCPN 259
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
V Y +L+D+L G+ +A++LF +++ + +KPD Y++ I + +A
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
++E +P++ Y L KG CK
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK------------------------------------- 342
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+ K +G+L++M++Q P + + +I+G C G ++ A ++ S + E L+ T+
Sbjct: 343 KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
YN L+ SL + G +++ L+ E+ + PD ++++ + + LG + +A + +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
+ C P Y G C+ E+D A + ++ N E Y+ + ++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAKKI 241
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
++ + +L +M C P + +I +C G EA +F + E
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 189/427 (44%), Gaps = 41/427 (9%)
Query: 126 RVTPSLVAEVLKVQTNP-TLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL 184
+++P+L+ EVLK +N L+ F WAE QKG+ H ++YNA + + + L
Sbjct: 91 KLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
+ M ++ K S++ F ++ R ++ A + + KM +FG K +NR++D L
Sbjct: 151 VDDMKAK-KLLSKETFALISRRYARARKVKEAIGAFHKME-EFGFKMESSDFNRMLDTLS 208
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
++ ++ A V+D +M++K PD+
Sbjct: 209 KSRNVGDAQKVFD-----------------------------------KMKKKRFEPDIK 233
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+YT+L+ + NL V EMK + EPDV+AY II + EE F EM
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEM 293
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+ + I+ SL+ + K+ + + SSG+ + YN L+ C +
Sbjct: 294 EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRM 353
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
E A+K +G+ P+ + +L +R + Y++ Q M P +
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--CEPTVSTYEIMV 411
Query: 485 SIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLK 543
+F K+ MA++++ +K KG + + +++ L+ +L ++ +A F+E+ ++
Sbjct: 412 RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIR 471
Query: 544 PDSFSYS 550
P +S
Sbjct: 472 PPGHMFS 478
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 178/401 (44%), Gaps = 20/401 (4%)
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
G+ V++ N+ G K YN ++++L + L S+ DD K L + TF
Sbjct: 108 GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFA 166
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
++ + +A ++ E + +M E + + + ++ L N+ +V+++MKK
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 333 RVEPDVMAYATIITGLS---NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
R EPD+ +Y ++ G N RV+E + +EMK +G D YG ++ + K
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDE---VNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
++ + I+ +LI GL + K A + F+ + G + + L
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI----FVEKKGPIMALEVFSYLKE 505
+ Y ++RME+ YK + +M G + AR + I + + A EV+ +
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKG---VGPNARTYDIILHHLIRMQRSKEAYEVYQTMSC 400
Query: 506 KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP--DSFSYSIAILCHVDLGEIK 563
+ VS Y I++ + A+ ++DE+ G + P FS I LCH + ++
Sbjct: 401 EPTVST--YEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN--KLD 456
Query: 564 QACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+ACE N+++++ P + L + L G D+ LV
Sbjct: 457 EACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 133/317 (41%), Gaps = 7/317 (2%)
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
+A I + +V+E F +M+ G ++ + + ++++ VG + +
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
+ D+ Y L+EG + ++ + EG EPD ++ ++ + +AK+
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 460 ENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNIL 517
E + +ME+ P + +K ALE F K G+ + YN L
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+ + M+ A DE+ + P++ +Y I + + + K+A E + MSC
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT---MSC 400
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVI 637
P+++ Y+ + + C +D A+ + + G P M+S + C N ++
Sbjct: 401 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL-PGMHMFSSLITALCHENKLDEAC 459
Query: 638 GVLNEMMQQGC-PPGNV 653
NEM+ G PPG++
Sbjct: 460 EYFNEMLDVGIRPPGHM 476
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K+K + + SY + + D++ M +G P + I+I H A +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +M + KP ++ +++ L L+ AL ++ K G E T+
Sbjct: 284 EEAIRFFNEMEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LV C + R+++ + + MR K P+ Y +++ L+ V++ M
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--- 399
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
EP V Y ++ N R++ ++ EMK KG L ++ SL+ + NK+
Sbjct: 400 CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEAC 459
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ +++ G R +++ L + L + + +K L
Sbjct: 460 EYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAF--AYCMNR--NNHHRAADQLPELMDSQGKPPSEKQF 200
+ +FF + K G+ +YNA AYC ++ + ++ D+ M +G P+ + +
Sbjct: 321 ALEFFERS-KSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDE----MRLKGVGPNARTY 375
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
+I++ R Y VY+ M +P V Y ++ LD+A+ ++D+ K
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTM----SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMK 431
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
G+ F L+ LC ++DE E M + RP ++ L + L+ +G D
Sbjct: 432 GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKD 491
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 187/423 (44%), Gaps = 43/423 (10%)
Query: 126 RVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASY------------------- 165
RV+ +V +VL + + L+++FF W+EKQ+ Y H+ +Y
Sbjct: 97 RVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDL 156
Query: 166 ----------NAFAYCMNRNNHHRA-----ADQLPELMDSQGKPPSEKQFEILIRMHSDA 210
N +C+ + RA A +M+ PP+ F L+ +
Sbjct: 157 INAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKS 216
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
+ V+E MR++F P Y+ +++ + +L A V+ + + G + VT
Sbjct: 217 KNVRKAQEVFENMRDRFT--PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVT 274
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ ++V LC+AGR+DE L ++ M +C+P F Y+VLV + L+ + + EM+
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEME 334
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
+ ++ DV + ++I R++ Y + KEMKSKG + ++ + +
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
FD+ + ++ D Y +I+ C + E A K+++ ++G+ P + L+
Sbjct: 395 EAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI 453
Query: 451 VLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
E + + LL++M ++G P R + ++++ +V +L EK V
Sbjct: 454 NGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERE----DVLKFLNEKMNV 509
Query: 510 SVD 512
V+
Sbjct: 510 LVN 512
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/425 (20%), Positives = 177/425 (41%), Gaps = 42/425 (9%)
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
L +D G S++ E ++ +AG L Y ++ + + V Y+ ++++
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAG--LLTYRFFQWSEKQRHYEHSVRAYHMMIEST 144
Query: 244 IRTGHLDLALSVYDDF-KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+ L + + K+ L+ E TF ++++ +A ++DE + M + P+
Sbjct: 145 AKIRQYKLMWDLINAMRKKKMLNVE--TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPN 202
Query: 303 VFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
+ A+ L+ L N+ V+E M+ DR PD Y+ ++ G + + +F+
Sbjct: 203 LVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFR 261
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EM G D Y +V+ +V +++ + S + IY+ L+ N
Sbjct: 262 EMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTEN 321
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
+ E+A F + G++ D L+ + +A RM+N Y++L++M
Sbjct: 322 RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM------------- 368
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGAN 541
K KG + NI++ L + GE +A +F ++
Sbjct: 369 ---------------------KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV- 406
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
+PD+ +Y++ I + E++ A + + + PS+ + L GLC+ +A
Sbjct: 407 CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKAC 466
Query: 602 MLVRD 606
+L+ +
Sbjct: 467 VLLEE 471
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 19/284 (6%)
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL---YAEAKRME 460
Y + Y+ +IE + ++ KL I + L+V+ ++ YA A++++
Sbjct: 130 YEHSVRAYHMMIESTAKIRQY----KLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVD 185
Query: 461 NFYKLLQQMEKLGFPVIDDLARF---FSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNIL 517
MEK P +L F S + K A EVF ++++ Y+IL
Sbjct: 186 EAIYAFNVMEKYDLP--PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSIL 243
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
++ K + KA +F E+ A PD +YSI + G + +A + C
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL--TVIHA-CKSNDAE 634
P+ Y L ++EA+ D + M+ ++ ++I A CK+N +
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAV----DTFLEMERSGMKADVAVFNSLIGAFCKANRMK 359
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
V VL EM +G P + C+ ++ + + G +EA VF +
Sbjct: 360 NVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 148/391 (37%), Gaps = 84/391 (21%)
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
M +++ MR+K +V + +++R +D + + M+K + P+++A+ +++
Sbjct: 153 MWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLS 211
Query: 347 GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA 406
L V + +F+ M+ + +
Sbjct: 212 ALCKSKNVRKAQEVFENMRDR------------------------------------FTP 235
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
D Y+ L+EG KA ++F+ I G PD ++ ++ + +A R++ ++
Sbjct: 236 DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV 295
Query: 467 QQMEKLGFPVIDDLARF-FSIFVEKKGPIMALE----VFSYLKEKGY-VSVDIYNILMDS 520
+ M+ P I F +S+ V G LE F ++ G V ++N L+ +
Sbjct: 296 RSMD----PSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
K MK + E+ + P+S S +I + ++ GE +A + K+I++ C P
Sbjct: 352 FCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPD 410
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
Y + K C+ + E V
Sbjct: 411 ADTYTMVIKMF------------------------------------CEKKEMETADKVW 434
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
M ++G P S +I+G+C+ T ++A
Sbjct: 435 KYMRKKGVFPSMHTFSVLINGLCEERTTQKA 465
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 211/486 (43%), Gaps = 15/486 (3%)
Query: 127 VTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
+ P L+ VL + L ++FF WA KQ Y H+ Y + +++ A L
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 170
Query: 186 ELMDSQGKPPSEKQ-FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
E M + E + F +L++ + A + V ++M KFG +P +++ ++DAL
Sbjct: 171 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEM-PKFGFEPDEYVFGCLLDALC 229
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
+ G + A +++D + R F L+ G C+ G++ E VL +M E PD+
Sbjct: 230 KHGSVKDAAKLFEDMRMRFPVNLRY-FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIV 288
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
YT L+ G + + +M++ EP+ Y +I L R+EE +F EM
Sbjct: 289 DYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+ D Y +LV F K+ + +L D++ G Y +++ F
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARF 483
E+ +L + Q PD ++ L + ++ +L +ME+ G P +D
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 484 FSIFVEKKGPIMALEVFSYLKEKGYVSVDIY---NILMDSLHKVGEMKKALSLFDEING- 539
+ + + A + F + +G SV Y +L++++ K +++ A ++ I
Sbjct: 469 INGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSK 528
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI----- 594
+ + S++I I G K+AC ++IEM +P + L KGL K+
Sbjct: 529 GACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREF 588
Query: 595 -GEIDE 599
GEI E
Sbjct: 589 AGEITE 594
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 161/385 (41%), Gaps = 40/385 (10%)
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDR---VEPDVMAYATIITGLSNGGRVEEGYVLFK 362
Y +V+IL + EEM+K+ +EP++ + ++ ++ V++ +
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLD 207
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EM G D ++G L+++ V L +D+ + +L + +L+ G C +
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVG 266
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR 482
K +A + + G EPD + LL YA A +M + Y LL+ M + GF
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP------ 320
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
+ + Y +L+ +L KV M++A+ +F E+
Sbjct: 321 ---------------------------NANCYTVLIQALCKVDRMEEAMKVFVEMERYEC 353
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
+ D +Y+ + G+I + + +I+ +PS Y + K +E +
Sbjct: 354 EADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 603 LVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
L+ + + P +Y++ + ACK + ++ + + NEM + G PG +I+G+
Sbjct: 414 LMEK-MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 663 CKYGTIEEARKVFSNLRERKLLTES 687
G + EA F + R L + S
Sbjct: 473 ASQGCLLEASDHFKEMVTRGLFSVS 497
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 156/379 (41%), Gaps = 43/379 (11%)
Query: 317 GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG-HLIDRAI 375
GNL VW K+ R + Y +++ LS + + L +EM+ + LI+ +
Sbjct: 127 GNLGYRFFVWA-AKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL 185
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
+ LV+ F + + V ++L ++ G+ D ++ L++ LC + A KLF+ +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE-DM 244
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPI 494
+ + LL + +M +L QM + GF P I D
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD--------------- 289
Query: 495 MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI- 553
Y L+ G+M A L ++ +P++ Y++ I
Sbjct: 290 -------------------YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQ 330
Query: 554 -LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
LC VD +++A + ++ C + Y L G CK G+ID+ +++ D +
Sbjct: 331 ALCKVD--RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGL 388
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P E Y ++ K E+ + ++ +M Q P + + VI CK G ++EA
Sbjct: 389 M-PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAV 447
Query: 673 KVFSNLRERKLLTESDTIV 691
++++ + E L DT V
Sbjct: 448 RLWNEMEENGLSPGVDTFV 466
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 128/268 (47%), Gaps = 21/268 (7%)
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDD------LARFFSIFVEKKGPIMALEVF 500
K ++ + ++ ++ + L+++M K +I+ + RF S + KK A+EV
Sbjct: 151 KSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKK----AIEVL 206
Query: 501 SYLKEKGYVSVD-IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL---CH 556
+ + G+ + ++ L+D+L K G +K A LF+++ P + Y ++L C
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF--PVNLRYFTSLLYGWCR 264
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
V G++ +A ++ E P I Y L G G++ +A L+RD + P
Sbjct: 265 V--GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRD-MRRRGFEPN 321
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
Y++ + CK + E+ + V EM + C V +A++SG CK+G I++ V
Sbjct: 322 ANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLD 381
Query: 677 NLRERKLLTESDTIVYDEFLIDHMKKKT 704
++ ++ L+ + Y ++ H KK++
Sbjct: 382 DMIKKGLMPSE--LTYMHIMVAHEKKES 407
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 173/374 (46%), Gaps = 8/374 (2%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN ++D + DLA + D K ++ TF +L++ +AG E + RM
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
+ C PD A+++++ L + ++ + KDR EPDV+ Y ++ G G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
E +FKEMK G + Y ++++ ++ D+ D++ SG + +NNL+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
+ EK +++ + G EPD ++ L+ + + +EN K+L M K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 476 VIDDLARFFSIF--VEKKGPIM-ALEVFSYLKE-KGYVSVDIYNILMDSLHKVGEMKKAL 531
V + + F +IF +EKK + A ++S + E K + YNILM L
Sbjct: 393 V--NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI-PSIAAYKCLTKG 590
+ E++ ++P+ +Y + + +G A + +++E C+ PS++ Y+ +
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 591 LCKIGEIDEAMMLV 604
L + G++ + LV
Sbjct: 511 LRRAGQLKKHEELV 524
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 173/397 (43%), Gaps = 6/397 (1%)
Query: 145 SFKFFHWAEKQKGYHHNFA-SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEIL 203
S FF+WA + Y H YN + A L +LM S+ S + F IL
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTIL 192
Query: 204 IRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG 263
IR + AG H + +M + +G P ++ ++ L R A S +D K D
Sbjct: 193 IRRYVRAGLASEAVHCFNRMED-YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DR 250
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ + + + LV+G C+AG I E +V M+ P+V+ Y++++ L G +
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAH 310
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
V+ +M P+ + + ++ GR E+ ++ +MK G D Y L+E+
Sbjct: 311 DVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
+ +L ++ + +N + + AH+++ ++ EP+
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSY 502
++ L+ ++ +K + K+ ++M +K P ++ ++F A ++F
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKE 490
Query: 503 LKEKGYV--SVDIYNILMDSLHKVGEMKKALSLFDEI 537
+ E+ + S+ +Y +++ L + G++KK L +++
Sbjct: 491 MVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 4/311 (1%)
Query: 167 AFAYCMNRNNHHRAADQLPELMDSQGK--PPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
AF+ ++ + R A + DS P + L+R AG V+++M+
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
G++P V+ Y+ ++DAL R G + A V+ D + G +TF L++ +AGR
Sbjct: 283 LA-GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
+++L+V +M++ C PD Y L+ NL+ ++V M K + E + + TI
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTI 401
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
+ V + ++ +M + Y L+ FV + K++
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG-LEPDFLSVKPLLVLYAEAKRMENFY 463
++ Y L+ C + + A+KLF+ ++E L P + +L A +++
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHE 521
Query: 464 KLLQQMEKLGF 474
+L+++M + G
Sbjct: 522 ELVEKMIQKGL 532
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
YN +I+ + +F+ A L + +E + L+ Y A +ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 471 KLGFPVIDDLARFFSIFVE----KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGE 526
G V D +A FSI + K+ A F LK++ V +Y L+ + GE
Sbjct: 214 DYGC-VPDKIA--FSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGE 270
Query: 527 MKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC 586
+ +A +F E+ A ++P+ ++YSI I G+I +A + +++ C P+ +
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 587 LTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ 646
L + K G E ++ V + + + P Y+ + C+ + E + VLN M+++
Sbjct: 331 LMRVHVKAGRT-EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
C + + + K + A +++S + E K E +T+ Y+ + + K+ D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK--CEPNTVTYNILMRMFVGSKSTD 447
Query: 707 LVM 709
+V+
Sbjct: 448 MVL 450
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/495 (21%), Positives = 196/495 (39%), Gaps = 46/495 (9%)
Query: 190 SQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
S+G P F + ++ + + +MR K GV Y ++ A ++ G++
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 250 DLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVL 309
+ A+ V D+ G+ + LV G C+ + + L++ RM E+ PD ++V+
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
V ++ + + MK R+ P + T+I G E +F + +
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESW 445
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
+ + + F KV A LK + G ++ YNN++ C + + A
Sbjct: 446 IAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
+F +++GLEP+ + L+ + + K +N + ++ QM F
Sbjct: 506 IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE-------------- 551
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDE-INGANLKPDSFS 548
A EV IYN +++ L KVG+ KA + I S
Sbjct: 552 ------ANEV-------------IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 549 YSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL 608
Y+ I V +G+ A E + ++ E P++ + L G CK +D A+ + +
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM- 651
Query: 609 GNVTSGPMEFMYSLTVIHA-----CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMC 663
ME L A CK ND + + +E+ + G P V +++ISG
Sbjct: 652 -----KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 664 KYGTIEEARKVFSNL 678
G ++ A ++ +
Sbjct: 707 NLGKMDAAIDLYKKM 721
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/498 (18%), Positives = 221/498 (44%), Gaps = 12/498 (2%)
Query: 169 AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFG 228
YC + N A L M+ +G P + F +++ + Y +M++
Sbjct: 354 GYC--KGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS-VR 410
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+ P L + ++ ++ + AL +++D E + + + + C+ G++D
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL-FCKQGKVDAAT 469
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
L M +K P+V Y ++ N+D ++ EM + +EP+ Y+ +I G
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG-YRAD 407
+ + + +M + + IY +++ V + ++L++L+ Y
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
YN++I+G + + A + ++ + G P+ ++ L+ + ++ RM+ ++
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 468 QMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHK 523
+M+ + + DL + ++ F +K A +FS L E G + +V +YN L+
Sbjct: 650 EMKSMELKL--DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAA 583
+G+M A+ L+ ++ + D F+Y+ I + G I A + +++++++ +P
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 584 YKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
+ L GL K G+ +A ++ + + P +YS + + + + + +EM
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEE-MKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 644 MQQGCPPGNVVCSAVISG 661
+++G + V + ++SG
Sbjct: 827 LEKGIVHDDTVFNLLVSG 844
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 215/498 (43%), Gaps = 15/498 (3%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
V P V N ++ +L+R+ +D A +Y+ G+ + VT +L++ + + +E +
Sbjct: 200 VVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAV 259
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK-KDRVEPDVMAYATIITG 347
++ R+ + PD +++ V+ +L L + EM+ K V Y ++I
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
G +EE + EM G + SLV + N++G DL + G D
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL--VLYAEAKR--MENFY 463
+++ ++E C + EKA + + + P + V ++ L AE+ +E F
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFN 439
Query: 464 KLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLH 522
+ GF + F +F ++ A +++KG +V YN +M +
Sbjct: 440 DSFESWIAHGFMC----NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
++ M A S+F E+ L+P++F+YSI I + + A + N++ + +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEV 555
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
Y + GLCK+G+ +A ++++ + Y+ + K D + + E
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
M + G P V +++I+G CK ++ A ++ ++ +L + D Y + KK
Sbjct: 616 MSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMEL--KLDLPAYGALIDGFCKK 673
Query: 703 ---KTADLVMSGLKFFGL 717
KTA + S L GL
Sbjct: 674 NDMKTAYTLFSELPELGL 691
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 2/319 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+QKG N YN R + A + M +G P+ + ILI
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDF-KEDGLDEERVTFM 272
+ V +M N + +YN I++ L + G A + + KE ++
Sbjct: 536 QNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYN 594
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
++ G + G D +E M E P+V +T L+ +D L + EMK
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
++ D+ AY +I G ++ Y LF E+ G + + ++Y SL+ F + K+ A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
DL K +V+ G DL Y +I+GL A L+ + G+ PD + L+
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 453 YAEAKRMENFYKLLQQMEK 471
++ + K+L++M+K
Sbjct: 775 LSKKGQFLKASKMLEEMKK 793
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 145/325 (44%), Gaps = 1/325 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+KG N +Y+ +N + A + M++ +E + +I G+
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ + + + + YN I+D ++ G D A+ Y + E+G VTF L
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C++ R+D LE+ M+ + D+ AY L+ + ++ ++ E+ + +
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
P+V Y ++I+G N G+++ L+K+M + G D Y ++++ + + D
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L +L+ G D ++ L+ GL +F KA K+ + ++ + P+ L ++ +
Sbjct: 752 LYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHH 811
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDD 479
+ ++L +M + G V DD
Sbjct: 812 REGNLNEAFRLHDEMLEKGI-VHDD 835
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ G+ P V +YN ++ G +D A+ +Y DG+ + T+ ++ GL + G I+
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNIN 747
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
++ + + PD + VLV L +G ++ EEMKK V P+V+ Y+T+I
Sbjct: 748 LASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVI 807
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
G G + E + L EM KG + D ++ LV V
Sbjct: 808 AGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRV 846
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 7/267 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR- 212
K+K Y + SYN+ + +A + M GK P+ F LI + R
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 213 --GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
L + H + M K + Y ++D + + A +++ + E GL
Sbjct: 642 DLALEMTHEMKSMELKLDLPA----YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSV 697
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ L+ G G++D +++ +M D+F YT ++ L+ GN++ ++ E+
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
+ PD + + ++ GLS G+ + + +EMK K + +Y +++ +
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLN 817
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEG 417
F L +++ G D ++N L+ G
Sbjct: 818 EAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 149/333 (44%), Gaps = 1/333 (0%)
Query: 144 LSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEIL 203
L++KFF W Q+ + H Y+ ++A +L + M G P + F +L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 204 IRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG 263
I +AG V + K + F +P YN I+ +L+ L VY+ EDG
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKT-FNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDG 252
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ +T+ +++ + G+ D + +L M + PD++ Y +L+ L L
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
+ M++ VEP V+ + T+I GLS G++E E G D Y ++ +
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGY 372
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
++ ++ ++ K++ G ++ YN++I G C KF++A L + G P+F
Sbjct: 373 ISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNF 432
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
+ L+ A ++ +++++ M + G V
Sbjct: 433 VVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYV 465
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
SYNA + + ++ D + E M G P + I++ + G+ R+Y + ++M
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
K G P ++ YN ++ L AL++ + +E G++ + F L+ GL +AG+
Sbjct: 284 V-KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGK 342
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
++ + + C PDV YTV++ + G L+ +++EM + P+V Y +
Sbjct: 343 LEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNS 402
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
+I G G+ +E L KEM+S+G + +Y +LV + KV +++KD+V G
Sbjct: 403 MIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Query: 404 YRADL 408
+ L
Sbjct: 463 HYVHL 467
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 44/327 (13%)
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS---GYRADLGIYNNLIE 416
L EM G+ + L+ + G D+++ + S YR YN ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-P 475
L + +++ +++ +++G PD L+ ++ + + Y+LL +M K GF P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLF 534
+ P+ AL + ++++E G V + L+D L + G+++
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
DE PD Y++ I ++ GE+++A E ++ E +P++ Y + +G C
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
G+ EA L L EM +GC P VV
Sbjct: 411 GKFKEACAL------------------------------------LKEMESRGCNPNFVV 434
Query: 655 CSAVISGMCKYGTIEEARKVFSNLRER 681
S +++ + G + EA +V ++ E+
Sbjct: 435 YSTLVNNLKNAGKVLEAHEVVKDMVEK 461
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 165/356 (46%), Gaps = 17/356 (4%)
Query: 135 VLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ-LPELMDSQGK 193
+LK+Q + LS +FF+WA+ + H+ ++ + + +N ++A+ L +++ + G
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 194 PPSEKQFEILIRMHSDAGRGLRVYHVY-------EKMRNK---------FGVKPRVFLYN 237
K F+ L+ + + RV+ +K RN +G P V N
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCN 207
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
M +L+ G +D+AL Y + + + T +++ G C++G++D+ +E+L M
Sbjct: 208 AYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
R +Y L+ +G L L++ M K ++P+V+ + T+I G +++E
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+F EMK+ + Y +L+ + F +D+V +G + D+ YN LI G
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
LC K KA + + +E L P+ + L++ K + ++L + M + G
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ G + YN ++ G L AL + + + GL VTF L+ G C+A ++
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E +V G M+ P+ Y L+ QG+ + R +E+M + ++ D++ Y +I
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL + + KE+ + + + + + +L+ GF+L K ++ SG
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+ +N L+ C F+ A ++ + ++ + D +V + + + KL
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 466 LQQMEKLGF 474
LQ+ME F
Sbjct: 506 LQEMEGKKF 514
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 139/318 (43%), Gaps = 3/318 (0%)
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
++ SL ++F + K D + G+ + N + L + + A + ++
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID-DLARFFSIFVEKKGP 493
+ + P+ ++ ++ Y + +++ +LLQ ME+LGF D + EK
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 494 IMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
AL++ + + + G +V +N L+ + ++++A +F E+ N+ P++ +Y+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I + G+ + A + ++ I Y L GLCK + +A V++ L
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-LDKEN 408
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P +S ++ C +A++ + M++ GC P + ++S C+ + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 673 KVFSNLRERKLLTESDTI 690
+V + R + +S T+
Sbjct: 469 QVLREMVRRSIPLDSRTV 486
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 1/216 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G N ++N + R + A ++ M + P+ + LI +S G
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ YE M G++ + YN ++ L + A + ++ L TF L
Sbjct: 361 MAFRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C D E+ M C P+ + +LV + DG +V EM + +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
D + GL + G+ + L +EM+ K L
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 165/356 (46%), Gaps = 17/356 (4%)
Query: 135 VLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ-LPELMDSQGK 193
+LK+Q + LS +FF+WA+ + H+ ++ + + +N ++A+ L +++ + G
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGV 147
Query: 194 PPSEKQFEILIRMHSDAGRGLRVYHVY-------EKMRNK---------FGVKPRVFLYN 237
K F+ L+ + + RV+ +K RN +G P V N
Sbjct: 148 DLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCN 207
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
M +L+ G +D+AL Y + + + T +++ G C++G++D+ +E+L M
Sbjct: 208 AYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERL 267
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
R +Y L+ +G L L++ M K ++P+V+ + T+I G +++E
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEA 327
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+F EMK+ + Y +L+ + F +D+V +G + D+ YN LI G
Sbjct: 328 SKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFG 387
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
LC K KA + + +E L P+ + L++ K + ++L + M + G
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ G + YN ++ G L AL + + + GL VTF L+ G C+A ++
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E +V G M+ P+ Y L+ QG+ + R +E+M + ++ D++ Y +I
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL + + KE+ + + + + + +L+ GF+L K ++ SG
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+ +N L+ C F+ A ++ + ++ + D +V + + + KL
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 466 LQQMEKLGF 474
LQ+ME F
Sbjct: 506 LQEMEGKKF 514
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/318 (19%), Positives = 139/318 (43%), Gaps = 3/318 (0%)
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
++ SL ++F + K D + G+ + N + L + + A + ++
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID-DLARFFSIFVEKKGP 493
+ + P+ ++ ++ Y + +++ +LLQ ME+LGF D + EK
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 494 IMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
AL++ + + + G +V +N L+ + ++++A +F E+ N+ P++ +Y+
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I + G+ + A + ++ I Y L GLCK + +A V++ L
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE-LDKEN 408
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P +S ++ C +A++ + M++ GC P + ++S C+ + A
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGAS 468
Query: 673 KVFSNLRERKLLTESDTI 690
+V + R + +S T+
Sbjct: 469 QVLREMVRRSIPLDSRTV 486
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 1/216 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G N ++N + R + A ++ M + P+ + LI +S G
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ YE M G++ + YN ++ L + A + ++ L TF L
Sbjct: 361 MAFRFYEDMVCN-GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C D E+ M C P+ + +LV + DG +V EM + +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
D + GL + G+ + L +EM+ K L
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 236/572 (41%), Gaps = 82/572 (14%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGL---RVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
M + G P + + LI H GL +V +Y KM GV P VF N ++ +
Sbjct: 84 MCTFGVVPDSRLWNSLI--HQFNVNGLVHDQVSLIYSKMI-ACGVSPDVFALNVLIHSFC 140
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
+ G L A+S+ + + + VT+ ++ GLC+ G DE + L M + PD
Sbjct: 141 KVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197
Query: 305 AYTVLVRILVPQGNLDGC------------------------LRVWEEMKKDRV----EP 336
+Y L+ GN L EE +D V +P
Sbjct: 198 SYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDP 257
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
DV+ +++II L GG+V EG +L +EM+ + Y +LV+S N L
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+V G DL +Y L++GL +A K F++ +++ P+ ++ L+ +A
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
+ + ++ QM L VI ++ + S+ GYV
Sbjct: 378 GDLSSAEFIITQM--LEKSVIPNVVTYSSMI------------------NGYV------- 410
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
K G +++A+SL ++ N+ P+ F+Y I G+ + A E ++ +
Sbjct: 411 ------KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIG 464
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG-NVTSGPMEFMYSLTVIHACKSNDAEK 635
+ L L +IG I E LV+D + VT + + + V K D E
Sbjct: 465 VEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF--KGGDEEA 522
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEF 695
+ EM ++G P V + +ISGM K+G + A + +RE+ + E D ++
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGI--EPDIATFNIM 579
Query: 696 LIDHMKKKTADLVMSGLKFFGLESKLKSKGCK 727
+ K+ ++ ++ L K+KS G K
Sbjct: 580 MNSQRKQGDSEGILK------LWDKMKSCGIK 605
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/559 (21%), Positives = 233/559 (41%), Gaps = 58/559 (10%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M G P F +I G+ L + +M + V P Y ++D+L +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREME-EMSVYPNHVTYTTLVDSLFKAN 308
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
AL++Y G+ + V + VL+ GL +AG + E + + E P+V YT
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
LV L G+L + +M + V P+V+ Y+++I G G +EE L ++M+ +
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
+ + YG++++ K +L K++ G + I + L+ L + + ++
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF 487
L + + +G+ D ++ L+ ++ + E ++M++ G P D+ + +
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW--DVVSYNVLI 546
Query: 488 --VEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLK 543
+ K G + A + ++EKG + DI +NI+M+S K G+ + L L+D++ +K
Sbjct: 547 SGMLKFGKVGADWAYKGMREKG-IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Query: 544 PDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK------------------ 585
P S +I + + G++++A N+++ M P++ Y+
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665
Query: 586 -----------------CLTKGLCKIGEIDEAMMLVRDCLG------NVTSGPMEFMYSL 622
L LCK+G +A M++ D VT + Y +
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ K + + MM+ G P + +I G+ G I+E K S ++ R
Sbjct: 726 -------GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 683 LLTESDTIVYDEFLIDHMK 701
+ D Y+ + K
Sbjct: 779 M--RPDDFTYNALISGQAK 795
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 183/388 (47%), Gaps = 8/388 (2%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
GR V + + M +K GV Y ++D + G + AL+ ++ +E G+ + V+
Sbjct: 483 GRIKEVKGLVKDMVSK-GVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ VL+ G+ + G++ G MREK PD+ + +++ QG+ +G L++W++MK
Sbjct: 542 YNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
++P +M+ ++ L G++EE + +M + Y +++ +
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
A F + L+S G + +YN LI LC L +KA + G PD ++ L+
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720
Query: 451 VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF--VEKKGPIMALEVF-SYLKEKG 507
Y + M + G + ++A + +I + G I ++ + S +K +G
Sbjct: 721 HGYFVGSHVRKALSTYSVMMEAG--ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 508 YVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
D YN L+ K+G MK +++++ E+ L P + +Y++ I ++G++ QA
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
E ++ + P+ + Y + GLCK+
Sbjct: 839 ELLKEMGKRGVSPNTSTYCTMISGLCKL 866
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 120/295 (40%), Gaps = 4/295 (1%)
Query: 151 WAEK---QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMH 207
WA K +KG + A++N + +L + M S G PS I++ M
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGML 618
Query: 208 SDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEE 267
+ G+ H+ +M + P + Y +D + D ++ G+
Sbjct: 619 CENGKMEEAIHILNQMM-LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
R + L+ LC+ G + V+G M + PD + L+ ++ L +
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
M + + P+V Y TII GLS+ G ++E EMKS+G D Y +L+ +
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ + ++++ G YN LI N+ K +A +L + + G+ P+
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPN 852
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 149/371 (40%), Gaps = 39/371 (10%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M +G P + +LI G+ + Y+ MR K G++P + +N +M++ + G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREK-GIEPDIATFNIMMNSQRKQG 587
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
+ L ++D K G+ ++ ++V LC+ G+++E + +L +M P++ Y
Sbjct: 588 DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 647
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
+ + D + E + ++ Y T+I L G ++ ++ +M+++
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G + D + SL+ + + V ++ +G ++ YN +I GL + ++
Sbjct: 708 GFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF 487
K G+ PD + L+ A+ M+
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKG-------------------------- 801
Query: 488 VEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
++ ++ + G V YN+L+ VG+M +A L E+ + P++
Sbjct: 802 --------SMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853
Query: 547 FSYSIAI--LC 555
+Y I LC
Sbjct: 854 STYCTMISGLC 864
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 1/227 (0%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P+ + I + S R ++ +E + + +G+K +YN ++ L + G A
Sbjct: 641 PNLTTYRIFLDTSSKHKRADAIFKTHETLLS-YGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
V D + G + VTF L+ G + + L M E P+V Y ++R L
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
G + + EMK + PD Y +I+G + G ++ ++ EM + G + +
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
Y L+ F V K+ +LLK++ G + Y +I GLC L
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKL 866
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 131/571 (22%), Positives = 235/571 (41%), Gaps = 76/571 (13%)
Query: 113 WGPPVVTELSKL---RRVTPSLVAEVLK--VQTNPTLSFKFFHWAEKQKGYHHNFASYNA 167
W P + L L ++PSLVA V+ + + +L+ FF+WA +Q GY H+ SY++
Sbjct: 28 WSPLIEQSLHGLGFRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHS 87
Query: 168 FAYCMNRNNHHRAADQLPE-------LMDSQ-----------GKPPS------EKQFEIL 203
++ + A D L + L+DS G+ E+ F
Sbjct: 88 IFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTG 147
Query: 204 IRMHSDAGR----GLRVYHVYE-------KMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
+H D GL Y+ KMR+K GV + + R+ +
Sbjct: 148 QEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHK-GVSLNTLGFGVYIGWFCRSSETNQL 206
Query: 253 LSVYDDFKEDGLD-EERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
L + D+ K+ L+ + ++++ LC+ R + +L +R C+PD AY V+
Sbjct: 207 LRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAE 266
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
V GNL V ++ +K V P Y I L + R+ E + + + S +
Sbjct: 267 AFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPM 326
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
D I +L+ S AV+ A + L +VS+G + + L + LC +K + K +
Sbjct: 327 DNDILDALIGSVSAVDPDSA-VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAY 385
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKK 491
++ +G + S ++ +A R+ Y LQ+M+K G
Sbjct: 386 ELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGL----------------- 428
Query: 492 GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
P V +YN L+++ K ++ A L+DE+ K + +Y++
Sbjct: 429 AP----------------DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNV 611
I + GE +++ +K++E P Y L +GLCK +I+ AM + R C+
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 612 TSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
+ S V++ C + + + +L E
Sbjct: 533 HKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G P + +++ L R D + Y+ G E ++ +++ LC+AGR+ E
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
L M+++ PDV Y L+ + ++W+EM + + ++ Y +I
Sbjct: 417 YTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK 476
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA- 406
LS G EE LF +M +G D IY SL+E K+ A ++ + + ++
Sbjct: 477 LSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTV 536
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
+ + + LC+ +A +L + +E LE V LL A+AK +E + +
Sbjct: 537 TRRVLSEFVLNLCSNGHSGEASQLLRE--REHLEHTGAHV-VLLKCVADAKEVEIGIRHM 593
Query: 467 QQMEKLGFPVI-----DDLARFFS 485
Q ++++ ++ D LA F S
Sbjct: 594 QWIKEVSPSLVHTISSDLLASFCS 617
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 138/352 (39%), Gaps = 38/352 (10%)
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
D ++Y +I LS + LFK++KS L+D ++Y SL+++ V K + F +L
Sbjct: 81 DSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVL 140
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
++ S+G + N L+ GL + ++ A KLF +G+ + L + + +
Sbjct: 141 EEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRS 200
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
+L+ +++K + G I+AL +
Sbjct: 201 SETNQLLRLVDEVKKANLNI--------------NGSIIAL------------------L 228
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
++ SL K A + +E+ + KPD +Y + V G + + K ++
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 577 CIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG--PMEFMYSLTVIHACKSNDAE 634
P + Y+ L + EA ++ + SG PM+ +I + + D +
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEA----KEVAEVIVSGKFPMDNDILDALIGSVSAVDPD 344
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
+ L M+ G P S + +C++ + K + L + +E
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 162/345 (46%), Gaps = 2/345 (0%)
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
G++ + VT LV G C + I + + V G+M + + DV T+L+ L +
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
L V + MK + P+V+ Y+++ITGL GR+ + EM SK + + +L+++
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ K+ + K ++ ++ Y++LI GLC N+ ++A K+ + I +G P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFS 501
++ L + ++ R+++ KLL M + G + G I +AL VF
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 502 YLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
Y+ G + ++ YNI++ L GE++KALS F+ + D +Y+I I
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
+K+A + K+ P AY + L + G EA L R
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 144/330 (43%), Gaps = 37/330 (11%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
K G+K V + ++D L + + AL V K+ G+ VT+ L+ GLC++GR+
Sbjct: 41 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 100
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+ L M K P+V ++ L+ +G L V++ M + ++P+V Y+++I
Sbjct: 101 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
GL RV+E + M SKG + Y +L F ++V G LL D+ G
Sbjct: 161 YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA 220
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV-LYAEAKRMENFYK 464
A+ N LI+G K + A +F GL P+ S +L L+A +
Sbjct: 221 ANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE------- 273
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDIYNILMDSLHK 523
VEK AL F ++ K + + + Y I++ + K
Sbjct: 274 -----------------------VEK-----ALSRFEHMQKTRNDLDIITYTIMIHGMCK 305
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+K+A LF ++ ++PD +Y+I I
Sbjct: 306 ACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 4/271 (1%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M +G P+ + LI +GR +M +K + P V ++ ++DA + G
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFSALIDAYAKRG 132
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
L SVY + +D T+ L+ GLC R+DE +++L M K C P+V Y+
Sbjct: 133 KLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYS 192
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L +D +++ ++M + V + ++ T+I G G+++ +F M S
Sbjct: 193 TLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSN 252
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
G + + Y ++ A +V + + + D+ Y +I G+C ++A
Sbjct: 253 GLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEA 312
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
+ LF + +EPDF K ++ AE R
Sbjct: 313 YDLFYKLKFKRVEPDF---KAYTIMIAELNR 340
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 52/286 (18%)
Query: 117 VVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNN 176
++ L K R V P+L EVLK K +G N +Y++ + ++
Sbjct: 54 LIDTLCKNRLVVPAL--EVLKRM--------------KDRGISPNVVTYSSLITGLCKSG 97
Query: 177 HHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLY 236
A++ MDS+ P+ F LI ++ G+ +V VY KM + + P VF Y
Sbjct: 98 RLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVY-KMMIQMSIDPNVFTY 156
Query: 237 ----------NRIMDAL-------------------------IRTGHLDLALSVYDDFKE 261
NR+ +A+ ++ +D + + DD +
Sbjct: 157 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 216
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
G+ V+ L+KG QAG+ID L V G M P++ +Y +++ L G ++
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 276
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L +E M+K R + D++ Y +I G+ V+E Y LF ++K K
Sbjct: 277 ALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 322
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
V ++M+++ G+ P V Y+ ++ L ++G L A + ++ +TF L+
Sbjct: 69 EVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
+ G++ ++ V M + P+VF Y+ L+ L +D +++ + M P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V+ Y+T+ G RV++G L +M +G + +L++ + K+ +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
+ S+G ++ YN ++ GL + EKA F+
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFE 282
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 124/284 (43%), Gaps = 18/284 (6%)
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
+M K +EPD++ ++++ G +++ + +M+ G D + L+++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
V ++LK + G ++ Y++LI GLC + A + + + P+ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 448 PLLVLYA---EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM------ALE 498
L+ YA + ++++ YK++ QM ID +S + G M A++
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMS------IDPNVFTYSSLIY--GLCMHNRVDEAIK 174
Query: 499 VFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHV 557
+ + KG +V Y+ L + K + + L D++ + ++ S + I +
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 558 DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
G+I A + IP+I +Y + GL GE+++A+
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 121/302 (40%), Gaps = 60/302 (19%)
Query: 438 GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP---VIDDLARFFSIFVEKKGPI 494
G+EPD ++ L+ + + +++ + QMEK+G V+D + + + +
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTI--LIDTLCKNRLVV 65
Query: 495 MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
ALEV +K++G +V Y+ L+ L K G + A E++ + P+ ++S I
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 554 LCHVDLGEIKQACECHNKIIEMS-----------------------------------CI 578
+ G++ + + +I+MS C
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC--------KS 630
P++ Y L G K +D+ + L+ D P + + TV +C ++
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDM-------PQRGVAANTV--SCNTLIKGYFQA 236
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
+ +GV M G P + V++G+ G +E+A F ++++ + + D I
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR--NDLDII 294
Query: 691 VY 692
Y
Sbjct: 295 TY 296
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/523 (20%), Positives = 219/523 (41%), Gaps = 39/523 (7%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
+Y+A R R A L + M PS + LI +G V +KM
Sbjct: 48 TYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM 107
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
+ GV P + +N ++ A ALS ++ K + + TF +++ L + G+
Sbjct: 108 TDN-GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 166
Query: 284 IDEMLEVLGRMREKL--CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
+ L++ MREK CRPDV +T ++ + +G ++ C V+E M + ++P++++Y
Sbjct: 167 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
++ + G + ++K G + D Y L+ S+ + G ++ +
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 286
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
+ ++ YN LI+ + +A ++F+ Q+G++P+ +SV LL + +K+ N
Sbjct: 287 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSL 521
+L + G + + YN + S
Sbjct: 347 VDTVLSAAQSRGINL---------------------------------NTAAYNSAIGSY 373
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
E++KA++L+ + +K DS +++I I + + +A ++ ++S +
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE-KVIGVL 640
Y + K G++ EA + + P Y+ +++HA +++ K +
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQ-MKMAGCEPDVIAYT-SMLHAYNASEKWGKACELF 491
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
EM G P ++ CSA++ K G + +RE+++
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 183/428 (42%), Gaps = 41/428 (9%)
Query: 127 VTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNR-NNHHRAADQLP 185
VT ++V K + + +F + K + ++N YC+++ +A D
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 186 ELMDSQGK-PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
+ + + + P F ++ ++S G V+E M + G+KP + YN +M A
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGAYA 234
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
G ALSV D K++G+ + V++ L+ ++ + + EV MR++ +P+V
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
Y L+ G L + ++ +M++D ++P+V++ T++ S + +
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+S+G ++ A Y S + S++ ++ L + + +AD + LI G C ++K+
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
P+ +S L++ME L P+ ++
Sbjct: 415 ----------------PEAIS-------------------YLKEMEDLSIPLTKEVYSSV 439
Query: 485 SIFVEKKGPIMALE-VFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
K+G + E +F+ +K G V Y ++ + + + KA LF E+ +
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Query: 543 KPDSFSYS 550
+PDS + S
Sbjct: 500 EPDSIACS 507
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/476 (18%), Positives = 187/476 (39%), Gaps = 27/476 (5%)
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM 294
+YN ++ R +D A ++ + ++ + T+ L+ +AG+ + ++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
P Y L+ GN L V ++M + V PD++ + +++ +G +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS--SGYRADLGIYN 412
+ F+ MK D + ++ + + DL + + R D+ +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
+++ + E +F+ + EGL+P+ +S L+ YA +L +++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 473 G-FPVIDDLARFFSIFVEKKGPIMALEVFSYL-KEKGYVSVDIYNILMDSLHKVGEMKKA 530
G P + + + + P A EVF + KE+ +V YN L+D+ G + +A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS---------- 580
+ +F ++ +KP+ V + + AC K + + + S
Sbjct: 313 VEIFRQMEQDGIKPNV----------VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLN 362
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
AAY E+++A+ L + +++ + +C+ + + I L
Sbjct: 363 TAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD-SVTFTILISGSCRMSKYPEAISYL 421
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
EM P V S+V+ K G + EA +F+ ++ E D I Y L
Sbjct: 422 KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG--CEPDVIAYTSML 475
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 191/439 (43%), Gaps = 14/439 (3%)
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
++M+ LI G A S+++ E+G +T+ LV L + +L ++ ++ +
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
+PD + ++ GNLD ++++E+MK+ +P + T+I G G++EE
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 357 GYVLFKEMKSKGHLI--DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
L M L DR LV+++ K+ ++++ + S G + D+ +N L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTC-NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 415 IEGLCNLNKFEKAHKL-FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+ + A + + ++P+ + ++ Y E +ME + +M++LG
Sbjct: 502 AKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG 561
Query: 474 FP----VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEM 527
V + L + F + G EV ++E G V D+ ++ LM++ VG+M
Sbjct: 562 VHPNLFVFNSLIKGFLNINDMDG---VGEVVDLMEEFG-VKPDVVTFSTLMNAWSSVGDM 617
Query: 528 KKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
K+ ++ ++ + PD ++SI + GE ++A + N++ + P++ Y +
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 588 TKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG 647
G C GE+ +AM + + G V P Y + ++ K +L +M +
Sbjct: 678 ISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKN 737
Query: 648 CPPGNVVCSAVISGMCKYG 666
P + G G
Sbjct: 738 VVPTRKTMQLIADGWKSIG 756
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 189/452 (41%), Gaps = 53/452 (11%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
++G+ + +Y + R H + L ++ G P F +I S++G
Sbjct: 347 EEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 406
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYD-DFKEDGLDEERVTFMV 273
+ ++EKM+ G KP +N ++ + G L+ + + D +++ L T +
Sbjct: 407 QAMKIFEKMKES-GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR---VWEEMK 330
LV+ C +I+E ++ +M+ +PDV + L + G+ C + M
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST--CTAEDMIIPRML 523
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK-- 388
++V+P+V TI+ G G++EE F MK G + ++ SL++ F+ +N
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 389 -VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
VG DL+++ G + D+ ++ L+ ++ ++ +++ ++ G++PD +
Sbjct: 584 GVGEVVDLMEEF---GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
L YA A E ++L QM K G
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGV--------------------------------- 667
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEING-ANLKPDSFSYSIAILCHVDLGEIKQAC 566
+V IY ++ GEMKKA+ ++ ++ G L P+ +Y I GE KQ
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIW---GFGEAKQPW 724
Query: 567 ECHNKIIEM---SCIPSIAAYKCLTKGLCKIG 595
+ + +M + +P+ + + G IG
Sbjct: 725 KAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 159/384 (41%), Gaps = 46/384 (11%)
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV------------ 384
DV + ++ GL GR +E + +F + +GH Y +LV +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 385 -AVNKVGAGFD----------------------LLKDLVSSGYRADLGIYNNLIEGLCNL 421
V K G D + + + SG + +N LI+G +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 422 NKFEKAHKLFQVTIQ-EGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL 480
K E++ +L + ++ E L+P+ + L+ + +++E + ++ +M+ G V D+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYG--VKPDV 495
Query: 481 ARFFSI--FVEKKGPIMALE---VFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFD 535
F ++ + G E + L K +V +++ + G+M++AL F
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 536 EINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
+ + P+ F ++ I +++ ++ E + + E P + + L +G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 596 EIDEAMMLVRDCL-GNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
++ + D L G + P +S+ ++ + EK +LN+M + G P V+
Sbjct: 616 DMKRCEEIYTDMLEGGID--PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVI 673
Query: 655 CSAVISGMCKYGTIEEARKVFSNL 678
+ +ISG C G +++A +V+ +
Sbjct: 674 YTQIISGWCSAGEMKKAMQVYKKM 697
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 198/461 (42%), Gaps = 25/461 (5%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P VF YN ++ ++R D+A ++D+ ++ L +R T+ L+ + G D L
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
L +M + D+ Y+ L+ + + + ++ +K+ + PD++AY ++I
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 272
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
E +L KEM G L + Y +L+ +V +K + ++ DL
Sbjct: 273 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
N +I+ L+ ++A +LF + +EP+ +S +L +Y EA+ L + M+
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIM----ALEVFSYLKEKGYVSVDI-YNILMDSLHKVG 525
+ I+ ++ ++ G M A + ++ +G I Y+ ++ K G
Sbjct: 393 RKD---IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
++ +A +LF ++ + ++ D Y I+ + +G + A +++ IP A
Sbjct: 450 KLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 586 CLTKGLCKIGEIDEAMMLVRDCL--GNVTS----GPMEFMYSLTVIHACKSNDAEKVIGV 639
L K G +EA + R G V G M +YS ++ VI V
Sbjct: 510 ILAKA----GRTEEATWVFRQAFESGEVKDISVFGCMINLYS-------RNQRYVNVIEV 558
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+M G P + V + V++ K E+A V+ ++E
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 599
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
N+ GV P Y+ ++ + ALSV+ + KE + T +++ Q +
Sbjct: 287 NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMV 346
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
E + +R+ P+V +Y ++R+ + ++ M++ +E +V+ Y T+
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
I E+ L +EM+S+G + Y +++ + K+ L + L SSG
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
D +Y +I + A +L + E PD + + + + A+A R E
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRL----LHELKLPDNIPRETAITILAKAGRTEEATW 522
Query: 465 LLQQMEKLGFPVIDDLARF---FSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDS 520
+ +Q + G + D++ F +++ + + +EVF ++ GY ++ +++++
Sbjct: 523 VFRQAFESG--EVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNA 580
Query: 521 LHKVGEMKKALSLFDEI 537
K E +KA +++ E+
Sbjct: 581 YGKQREFEKADTVYREM 597
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 141/344 (40%), Gaps = 58/344 (16%)
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
+ Y + YN ++ + +F+ AH LF Q L PD + L+ + + ++
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI----MALEVFSYLKEKGYVSVDI--YN 515
LQ+ME+ V DL +S +E + A+ +FS LK G ++ D+ YN
Sbjct: 209 ALSWLQKMEQ--DRVSGDLV-LYSNLIELSRRLCDYSKAISIFSRLKRSG-ITPDLVAYN 264
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
+++ K ++A L E+N A + P++ SYS + +V+ + +A ++ E+
Sbjct: 265 SMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEV 324
Query: 576 SCI-----------------------------------PSIAAYKCLTKGLCKIGEIDEA 600
+C P++ +Y + + + EA
Sbjct: 325 NCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEA 384
Query: 601 MMLVR-----DCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVC 655
+ L R D NV + Y+ + K+ + EK ++ EM +G P +
Sbjct: 385 IHLFRLMQRKDIEQNVVT------YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 656 SAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDH 699
S +IS K G ++ A +F LR + E D ++Y ++ +
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGV--EIDQVLYQTMIVAY 480
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 90/216 (41%), Gaps = 7/216 (3%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++K N +YN + H A L + M S+G P+ + +I + AG+
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK-EDGLDEERVTFM 272
R +++K+R+ GV+ LY ++ A R G + A + + K D + E
Sbjct: 452 DRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRE----- 505
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
+ L +AGR +E V + E D+ + ++ + + V+E+M+
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
PD A ++ E+ +++EM+ +G
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 155/393 (39%), Gaps = 34/393 (8%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G H+ S+ C R A M G PS F L+ R
Sbjct: 109 GISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEA 168
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+ +++ G +P V +YN I+D+L G ++ AL V K+ G+ + VT+ L+
Sbjct: 169 MSLVDQIVG-LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
L +G +L M PDV ++ L+ + +G L + + EM + V P
Sbjct: 228 RLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+++ Y ++I GL G ++E + + SKG + Y +L+ + +V G +L
Sbjct: 288 NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+ G D YN L +G C KF A K+ + G+ PD + LL +
Sbjct: 348 CVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
++ K L ++E L K K V + YNI
Sbjct: 408 GKIG---KALVRLEDLQ------------------------------KSKTVVGIITYNI 434
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
++ L K +++ A LF + + PD +Y
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 3/316 (0%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI-RMHSDAGRGLR 215
GY N YN + A + + M G P + LI R+ G+
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
+ + MR G+ P V ++ ++D + G L A Y++ + ++ VT+ L+
Sbjct: 239 ARILSDMMR--MGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
GLC G +DE +VL + K P+ Y L+ +D +++ M +D V+
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
D Y T+ G G+ + M S G D + L++ K+G
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
L+DL S + YN +I+GLC +K E A LF +G+ PD ++ +++
Sbjct: 417 LEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRR 476
Query: 456 AKRMENFYKLLQQMEK 471
+ ++L ++M+K
Sbjct: 477 KRLWREAHELYRKMQK 492
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 188/437 (43%), Gaps = 15/437 (3%)
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
AL+++ D E V F L+ + + + + ++ + + D++++T L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
L L +M K EP ++ + +++ G + R E L ++ G+
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
+ IY ++++S +V D+LK + G R D+ YN+LI L + + + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 432 QVTIQEGLEPDFLSVKPLLVLYA------EAKRMENFYKLLQQMEKLGFPVIDDLARFFS 485
++ G+ PD ++ L+ +Y EAK+ N +++Q+ + L
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN--EMIQRSVNPNIVTYNSLINGLC 300
Query: 486 IFVEKKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLK 543
I G + A +V + L KG+ + YN L++ K + + + ++ +
Sbjct: 301 I----HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 544 PDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMML 603
D+F+Y+ + G+ A + +++ P + + L GLC G+I +A++
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVR 416
Query: 604 VRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMC 663
+ D + T + Y++ + CK++ E + + +G P + ++ G+
Sbjct: 417 LEDLQKSKTVVGI-ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 664 KYGTIEEARKVFSNLRE 680
+ EA +++ +++
Sbjct: 476 RKRLWREAHELYRKMQK 492
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/404 (18%), Positives = 159/404 (39%), Gaps = 42/404 (10%)
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
+ ++ L + M E P + ++ L+ + + + ++ ++ + D+ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
T+I R+ +M G +GSLV F VN+ L+ +V
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
GY ++ IYN +I+ LC + A + + + G+ PD ++ L+ +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
++L M ++G D+ F ++ +D+Y
Sbjct: 239 ARILSDMMRMGIS--PDVITFSAL------------------------IDVYG------- 265
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K G++ +A ++E+ ++ P+ +Y+ I G + +A + N ++ P+
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 583 AYKCLTKGLCKIGEIDEAM----MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG 638
Y L G CK +D+ M ++ RD + T F Y+ C++
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT-----FTYNTLYQGYCQAGKFSAAEK 380
Query: 639 VLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
VL M+ G P + ++ G+C +G I +A +L++ K
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGR-- 212
Q+ + N +YN+ + + A ++ ++ S+G P+ + LI + A R
Sbjct: 282 QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVD 341
Query: 213 -GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
G+++ V ++ GV F YN + + G A V G+ + TF
Sbjct: 342 DGMKILCVM----SRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
+L+ GLC G+I + L L +++ + Y ++++ L ++ ++ +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
V PDV+ Y T++ GL E + L+++M+ + L+
Sbjct: 458 KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 117/243 (48%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+K V +YN I+D L + GH A +++ + + G+ + +T+ ++ C++GR +
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
++L M E+ PDV ++ L+ LV +G + ++ +M + + P + Y ++I G
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
R+ + + M SK D + +L+ + +V G ++ ++ G A+
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
Y LI G C + + A L V I G+ P++++ + +L K + + +L+
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Query: 469 MEK 471
++K
Sbjct: 312 LQK 314
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
I+ R+ D G + +++ +M +K G+ P V Y+ ++D+ R+G A + D E
Sbjct: 82 IIDRLCKD-GHHIHAQNLFTEMHDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIE 139
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
++ + VTF L+ L + G++ E E+ G M + P Y ++ Q L+
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
R+ + M PDV+ ++T+I G RV+ G +F EM +G + + Y +L+
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
F V + A DLL ++SSG + + +++ LC+ + KA + +
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 138/331 (41%), Gaps = 41/331 (12%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G +P V + +M+ L G + AL++ D E+G + ++ GLC+ G +
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGDTESA 60
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
L +L +M E + V Y ++ L G+ ++ EM + PDV+ Y+ +I
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
GR + L ++M + D + +L+ + V KV ++ D++ G
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
YN++I+G C ++ A ++ + PD ++ L+ Y +AKR++N
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN------ 234
Query: 468 QMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGE 526
+E+F + +G V+ + Y L+ +VG+
Sbjct: 235 ----------------------------GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 527 MKKALSLFDEINGANLKPD--SFSYSIAILC 555
+ A L + + + + P+ +F +A LC
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 138/318 (43%), Gaps = 17/318 (5%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
PDV+ + T++ GL GRV + L M +GH YG+++ + + +L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTESALNL 63
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
L + + +A + IYN +I+ LC A LF +G+ PD ++ ++ +
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 456 AKRMENFYKLLQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI- 513
+ R + +LL+ M E+ P + + + V++ A E++ + +G I
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LC---HVDLGEIKQACEC 568
YN ++D K + A + D + + PD ++S I C VD G ++ CE
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG-MEIFCEM 242
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
H + I + + Y L G C++G++D A L+ + + + P + + C
Sbjct: 243 HRRGI----VANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA-PNYITFQSMLASLC 297
Query: 629 KSNDAEKVIGVLNEMMQQ 646
+ K +L ++ +
Sbjct: 298 SKKELRKAFAILEDLQKS 315
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
YNA + ++ HH A L M +G P + +I +GR + M
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
+ + P V ++ +++AL++ G + A +Y D G+ +T+ ++ G C+ R+
Sbjct: 139 ER-QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
++ +L M K C PDV ++ L+ +D + ++ EM + + + + Y T+
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
I G G ++ L M S G + + S++ S + ++ F +L+DL S
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 21/287 (7%)
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
+V +G R D+ + L+ GLC + +A L ++EG +P + L +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGL----CKMGD 56
Query: 459 MENFYKLLQQMEKLGF--------PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YV 509
E+ LL +ME+ +ID L + I A +F+ + +KG +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCK-------DGHHIHAQNLFTEMHDKGIFP 109
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
V Y+ ++DS + G A L ++ + PD ++S I V G++ +A E +
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIY 169
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
++ P+ Y + G CK +++A ++ D + + + P +S + CK
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML-DSMASKSCSPDVVTFSTLINGYCK 228
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
+ + + + EM ++G V + +I G C+ G ++ A+ + +
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 156/332 (46%), Gaps = 12/332 (3%)
Query: 121 LSKLRRVTPSLVAEVLKVQTN---PTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNH 177
L++LR EVLK+ N P+ + K+K Y + + +A +N+
Sbjct: 51 LARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQ---PTESLYALMINKFGQ 107
Query: 178 HRAADQLPELMDSQGKPP----SEKQFEILIRMHSD-AGRGLRVYHVYEKMRNKFGVKPR 232
+ D++ E+M + SE+ F L+R++ + AGR R + M + FG P
Sbjct: 108 AKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPD-FGCWPS 166
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
+N I++ L+ D ++ + G++ + +L+KGLC++G ++ L++L
Sbjct: 167 SKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLD 226
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
++ RP+V ++ L+R +G + ++ E M+K+R+EPD + + +I+GL G
Sbjct: 227 EFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKG 286
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
RVEEG L + MK KG + Y ++ + + +++ ++S G R Y
Sbjct: 287 RVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYK 346
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
++ GLC + + + + G P L
Sbjct: 347 KMVLGLCETKSVVEMDWVLRQMVNHGFVPKTL 378
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 33/203 (16%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G D N LI+GLC E A +L Q+ P+ ++ PL+ + + E
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
+KLL++MEK E+ +NIL+ L
Sbjct: 257 FKLLERMEK---------------------------------ERIEPDTITFNILISGLR 283
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
K G +++ + L + + +P+ +Y + +D +A E +++I PS
Sbjct: 284 KKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFL 343
Query: 583 AYKCLTKGLCKIGEIDEAMMLVR 605
+YK + GLC+ + E ++R
Sbjct: 344 SYKKMVLGLCETKSVVEMDWVLR 366
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/568 (21%), Positives = 215/568 (37%), Gaps = 109/568 (19%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV--FLYNRIMDALIR 245
M+ G P + +I H + V+ KM K + R+ + + I+ +
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK---RKRINCVIVSSILQCYCQ 373
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
G+ A ++ +F+E + +RV + V L + G+++E +E+ M K PDV
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
YT L+ QG + EM PD++ Y + GL+ G +E + K M+
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 366 SKG-------------HLID-------RAIY-----------GSLVESFVAVNKVGAGF- 393
++G LID A Y S+V+ F A + F
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFE 553
Query: 394 --------------------------------DLLKDLVSSGYRADLGIYNNLIEGLCNL 421
DLL + G + +Y LI C +
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM------------ 469
N KA + F++ + + + PD + ++ Y + Y L + M
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Query: 470 --------------EKLGFPVIDDLARFFSIFVEKKGPIMALE----VFSYLKEKGYV-S 510
E F VI D+ +++I + + + L+ +F +K + V
Sbjct: 674 SVLLNSDPELDMKREMEAFDVIPDVV-YYTIMINRYCHLNDLKKVYALFKDMKRREIVPD 732
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
V Y +L+ + K +L E+ ++KPD F Y++ I +G++ +A +
Sbjct: 733 VVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
++IE P A Y L CK+G + EA M+ D + P Y+ + C++
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF-DRMIESGVKPDVVPYTALIAGCCRN 844
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
K + ++ EM+++G P SAV
Sbjct: 845 GFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 193/442 (43%), Gaps = 22/442 (4%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
MD GK P + +L + G + + M N+ GVKP +N +++ LI G
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENR-GVKPTYVTHNMVIEGLIDAG 515
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
LD A + Y+ + + R +VKG C AG +D E R+ L P +T
Sbjct: 516 ELDKAEAFYESLEH----KSRENDASMVKGFCAAGCLDHAFERFIRLEFPL--PKSVYFT 569
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
+ + + + + + M K VEP+ Y +I V + F+ + +K
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 368 GHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKA 427
+ D Y ++ ++ +N+ + L +D+ + D+ Y+ L+ L+ ++
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD-MKRE 688
Query: 428 HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF 487
+ F V PD + ++ Y ++ Y L + M++ ++ D+ + +
Sbjct: 689 MEAFDVI------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRR--EIVPDVVTYTVLL 740
Query: 488 VEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
K ++ E+ ++ + V Y +L+D K+G++ +A +FD++ + + PD+
Sbjct: 741 KNKPERNLSREMKAFDVKP---DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAA 797
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC 607
Y+ I C +G +K+A +++IE P + Y L G C+ G + +A+ LV++
Sbjct: 798 PYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM 857
Query: 608 LGNVTSGPMEFMYSLTVIHACK 629
L G SL+ +H K
Sbjct: 858 L---EKGIKPTKASLSAVHYAK 876
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/542 (19%), Positives = 220/542 (40%), Gaps = 55/542 (10%)
Query: 178 HRAADQLPELMDSQGKPPSEKQ------FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
HR +P+ +D K +++ +++ + G Y ++++ R
Sbjct: 336 HRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLD 395
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
RV YN DAL + G ++ A+ ++ + G+ + + + L+ G C G+ + +++
Sbjct: 396 RV-CYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
M PD+ Y VL L G + M+ V+P + + +I GL +
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 352 GRVEEGYVLFKEMKSKG------------------HLIDR----------AIYGSLVESF 383
G +++ ++ ++ K H +R ++Y +L S
Sbjct: 515 GELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSL 574
Query: 384 VA-VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
A + + DLL + G + +Y LI C +N KA + F++ + + + PD
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 443 FLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI---MALEV 499
+ ++ Y + Y L + M++ V D+ + S+ + + +E
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRD--VKPDVVTY-SVLLNSDPELDMKREMEA 691
Query: 500 FSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDL 559
F + + Y Y I+++ + ++KK +LF ++ + PD +Y++ L
Sbjct: 692 FDVIPDVVY-----YTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTV-------L 739
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
+ K ++ P + Y L CKIG++ EA + D + P
Sbjct: 740 LKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIF-DQMIESGVDPDAAP 798
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
Y+ + CK ++ + + M++ G P V +A+I+G C+ G + +A K+ +
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 680 ER 681
E+
Sbjct: 859 EK 860
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 213/531 (40%), Gaps = 86/531 (16%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
Y +++ L ++ A SV D ++ G+D + + +++G + I + ++V +M
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
+K R + + +++ GN +++E ++ + D + Y L G+VE
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
E LF+EM KG D Y +L+ K FDL+ ++ +G D+ IYN L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLS---VKPLLVLYAEAKRMENFYKLLQQMEK- 471
GL ++A + ++ G++P +++ V L+ E + E FY+ L+ +
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 472 ------LGFPVIDDLARFFSIFVEKKGPI---MALEVFSYL-KEKGYVS----------- 510
GF L F F+ + P+ + +F+ L EK Y+S
Sbjct: 534 NDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 511 ------VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
+Y L+ + +V ++KA F+ + + PD F+Y+I I + L E KQ
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQ 653
Query: 565 A----------------------------CECHNKIIEMSCIPSIAAYKCLTKGLCKIGE 596
A + ++ IP + Y + C + +
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Query: 597 IDEAMMLVRD-----CLGNVTS----------------------GPMEFMYSLTVIHACK 629
+ + L +D + +V + P F Y++ + CK
Sbjct: 714 LKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCK 773
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
D + + ++M++ G P +A+I+ CK G ++EA+ +F + E
Sbjct: 774 IGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIE 824
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 165/445 (37%), Gaps = 45/445 (10%)
Query: 112 KWGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
+W +V++ P E+LK Q N S FF W Y S N
Sbjct: 63 RWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGA 122
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG---RGLRVYHVYEKMRNKFG 228
+ +AA +D+ G P E ++ S+ G + VY+V + M G
Sbjct: 123 LLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDM----G 175
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+ V N ++ ++ LD ++ + E D ER+ L++ LC G + E
Sbjct: 176 ISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIR--CLIRALCDGGDVSEGY 233
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
E+L + ++ P + Y L+ GN V M P + Y II GL
Sbjct: 234 ELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGL 293
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
+ E Y +FK +K KG+ DR +Y +++ F +G+ L +++ G R +
Sbjct: 294 CMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNE 353
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
YN +I G + + ++ G LS ++ + + + +++ +
Sbjct: 354 FAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 469 MEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMK 528
M + G + YN L+ K +++
Sbjct: 414 MSETGVT---------------------------------PNAITYNALIKGFCKENKVE 440
Query: 529 KALSLFDEINGANLKPDSFSYSIAI 553
K L L+ E+ LKP +Y+ +
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALV 465
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 5/230 (2%)
Query: 191 QGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM--RNKFGVKPRVFLYNRIMDALIRTGH 248
QG P + + LI + G + V M N F P +++Y +I+ L
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF---PSMYIYQKIIKGLCMNKK 298
Query: 249 LDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
A ++ + K+ G +RV + +++G C+ G + ++ M +K RP+ FAY V
Sbjct: 299 QLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNV 358
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
++ +G + + EM ++ +++ T+I G + G+ +E + +FK M G
Sbjct: 359 MIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG 418
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+ Y +L++ F NKV G L K+L + G + Y L+ L
Sbjct: 419 VTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 142/335 (42%), Gaps = 21/335 (6%)
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
L ++G++ + + ++ L E+A +++ V G+ ++ +L+ +A++
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 459 MENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD----IY 514
++ F++L ++M + F D R + E + LK+ +D +Y
Sbjct: 196 LDRFWELHKEMVESEF----DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVY 251
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIKQACECHNKI 572
L+ ++G + + N P + Y I LC ++ +++ C N +
Sbjct: 252 AKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC-MNKKQLEAYCIFKN-L 309
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
+ P Y + +G C+ G + A L + + P EF Y++ + K +
Sbjct: 310 KDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMR-PNEFAYNVMIHGHFKRGE 368
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
V NEM++ G + C+ +I G C +G +EA ++F N+ E + + I Y
Sbjct: 369 ISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV--TPNAITY 426
Query: 693 DEFLIDHMKKKTADLVMSGLKFFGLESKLKSKGCK 727
+ + K+ + V GLK + +LK+ G K
Sbjct: 427 NALIKGFCKE---NKVEKGLKLY---KELKALGLK 455
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 211/505 (41%), Gaps = 39/505 (7%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + YN ++ L G AL V+D+ K G + + T+ +L++G C++ R+D+ + +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
G M+ PD Y L+ + + +++E+M ++ V Y +I GL
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
GR E G+ LF ++K KG +D + + K+ L++++ + G+ DL
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK------ 464
++L+ G +++ KL + + L P+ L + A KR ++ K
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA--GVEASLKRPQSKDKDYTPMF 524
Query: 465 -----LLQQMEKLG-----------FPVIDD---LARFFSIFVEKKG---PIMALEVFSY 502
L M +G P+ DD + + ++ P+ L
Sbjct: 525 PSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQR 584
Query: 503 LKEK-GYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP-DSFSYSIAILCHVDLG 560
++ K VD+ N + G++ A LF+ NG + S++Y+ + V G
Sbjct: 585 VEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKG 644
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT--SGPMEF 618
+ A +++ E C IA Y + +GL K+G D L L +T G ++
Sbjct: 645 YFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRAD----LASAVLDRLTKQGGYLDI 700
Query: 619 MYSLTVIHAC-KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSN 677
+ T+I+A K+ ++ + + M G P V + +I K G ++EA K
Sbjct: 701 VMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKA 760
Query: 678 LRERKLLTESDTIVYDEFLIDHMKK 702
+ + L T ++L M+K
Sbjct: 761 MLDAGCLPNHVTDTILDYLGKEMEK 785
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 177/433 (40%), Gaps = 53/433 (12%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M G P + L+ A + ++EKM + GV+ + YN ++D L R G
Sbjct: 350 MQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE-GVRASCWTYNILIDGLFRNG 408
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
+ +++ D K+ G + +TF ++ LC+ G+++ ++++ M + D+ +
Sbjct: 409 RAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY-ATIITGLSNGGRVEEGYVLFKEMKS 366
L+ QG D ++ + +++ + P+V+ + A + L ++ Y S
Sbjct: 469 SLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPM--FPS 526
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL-----VSSGYRADLGIYNNL---IEGL 418
KG +D + S V GA + + + SS Y L N + GL
Sbjct: 527 KGSFLD-------IMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGL 579
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL-----------------LVLYAEAKRMEN 461
+ E F V + +LS L L Y M +
Sbjct: 580 ARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSS 639
Query: 462 FYK---------LLQQMEKLGFPVIDDLARFFSIFVEKKGPI----MALEVFSYL-KEKG 507
F K +L QM + F D +++ ++ G + +A V L K+ G
Sbjct: 640 FVKKGYFQTARGVLDQMFE-NFCAAD--IATYNVIIQGLGKMGRADLASAVLDRLTKQGG 696
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
Y+ + +YN L+++L K + +A LFD + + PD SY+ I + G++K+A +
Sbjct: 697 YLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYK 756
Query: 568 CHNKIIEMSCIPS 580
+++ C+P+
Sbjct: 757 YLKAMLDAGCLPN 769
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 181/460 (39%), Gaps = 68/460 (14%)
Query: 188 MDSQGKPPSEKQ-FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
+D+ P SE +IL R D + L + +R G K Y++I + RT
Sbjct: 48 LDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRP--GYKHSATAYSQIFRTVCRT 105
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE--KLCRPDVF 304
G L + KEDG++ ++ +L+ L ++G+ + L VL M E P V+
Sbjct: 106 GLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVY 165
Query: 305 ---------------AYTVLVRILVPQGN--------------LDGCL------------ 323
A ++L ++L N L G +
Sbjct: 166 DSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRA 225
Query: 324 -------RVWEEMKK-DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI---- 371
RV+E++K R + D +Y I G G ++ LFKEMK + +
Sbjct: 226 DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 372 --DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
D Y SL+ K + +L SG+ D Y LI+G C + + A +
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMR 345
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
++ G PD + LL +A+++ +L ++M + G + ++I ++
Sbjct: 346 IYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG---VRASCWTYNILID 402
Query: 490 ---KKGPIMA-LEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKP 544
+ G A +F LK+KG +V ++I+ L + G+++ A+ L +E+
Sbjct: 403 GLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV 462
Query: 545 DSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
D + S ++ G + I E + +P++ +
Sbjct: 463 DLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 150/359 (41%), Gaps = 30/359 (8%)
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
AY+ I + G + E L MK G +D+ + L++S + K + +L +
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHK-LFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
G + +Y++++ L ++ A LF++ D + + ++V Y
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 459 MENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILM 518
N +LL +G D + F +F + KG ++ F + YNI +
Sbjct: 214 AVN--ELL-----VGLRRADMRSEFKRVFEKLKG----MKRFKF-------DTWSYNICI 255
Query: 519 DSLHKVGEMKKALSLFDEIN------GANLKPDSFSYS--IAILCHVDLGEIKQACECHN 570
G++ ALSLF E+ G++ PD +Y+ I +LC G+ K A +
Sbjct: 256 HGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCL--FGKAKDALIVWD 313
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
++ P + Y+ L +G CK +D+AM + + N P +Y+ + K+
Sbjct: 314 ELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFV-PDTIVYNCLLDGTLKA 372
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ + +M+Q+G + +I G+ + G E +F +L+++ ++ T
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAIT 431
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 191/472 (40%), Gaps = 37/472 (7%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
I++ L+R D Y GL + + VL + + G + ++L M
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
+P+V+ YT+ + L ++ +++E MKK V P++ Y+ +I G G V + Y
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
L+KE+ L + ++G+LV+ F ++ L +V G +L +YN LI G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID 478
C +A L L PD + L+ G + D
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN---------------------GLCIED 388
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEIN 538
+A +F + K E+ + S YN L+ K M++AL L E+
Sbjct: 389 QVAEANRLFQKMKN------------ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
+ ++P+ ++S I + ++ +IK A + ++ +P + Y L K +
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 599 EAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
EA+ L D L P + ++ V K I E QQ +V + +
Sbjct: 497 EALRLYSDML-EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 659 ISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMK-KKTADLVM 709
I G+C+ G I A + FS++R + D Y L H++ K+ D +M
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGI--TPDICSYVSMLKGHLQEKRITDTMM 605
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 187/462 (40%), Gaps = 42/462 (9%)
Query: 151 WAEKQ----KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRM 206
W + Q +G + Y C + + ++L + M S G P+ + I I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 207 HSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE 266
+ ++E M+ K GV P ++ Y+ ++D +TG++ A +Y + L
Sbjct: 244 LCRDNKMEEAEKMFELMK-KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
V F LV G C+A + + M + P+++ Y L+ GN+ + +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
EM+ + PDV Y +I GL +V E LF++MK++ A Y SL+ +
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL-FQVTIQEGLEPDFLS 445
+ DL ++ +SG ++ ++ LI+G CN+ + A L F++TI+ G+ PD ++
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-GIVPDVVT 481
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE 505
L+ + + M+ AL ++S + E
Sbjct: 482 YTALIDAHFKEANMKE----------------------------------ALRLYSDMLE 507
Query: 506 KGYVSVD-IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
G D + L+D K G + A+ + E N + ++ I G I +
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILR 567
Query: 565 ACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
A + + P I +Y + KG + I + MML D
Sbjct: 568 ASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 182/419 (43%), Gaps = 53/419 (12%)
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
F +L+ + G +E L V RE C PD A CL
Sbjct: 134 VFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKA----------------CL------ 168
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+I+ GL R + +V ++ M S+G + D IY L +
Sbjct: 169 -------------SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
LL ++ S G + ++ IY I LC NK E+A K+F++ + G+ P+ + +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEK 506
+ Y + + Y L +++ L ++ ++ F ++ F + + + A +F ++ +
Sbjct: 276 IDGYCKTGNVRQAYGLYKEI--LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF 333
Query: 507 GY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVDLGEIK 563
G ++ +YN L+ K G M +A+ L E+ NL PD F+Y+I I LC D ++
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED--QVA 391
Query: 564 QACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG--PMEFMYS 621
+A K+ PS A Y L G CK +++A+ L C SG P +S
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL---CSEMTASGVEPNIITFS 448
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ C D + +G+ EM +G P V +A+I K ++EA +++S++ E
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 171/404 (42%), Gaps = 51/404 (12%)
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+++L+ + G + L V EMK PD A +I+ GL R + +V ++ M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
S+G + D IY L + LL ++ S G + ++ IY I LC NK
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
E+A K+F++ + G+ P+ + ++ Y + + Y L +++ L ++ ++ F
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI--LVAELLPNVVVFG 308
Query: 485 SI---FVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGA 540
++ F + + + A +F ++ + G ++ +YN L+ K G M +A+ L E+
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 541 NLKPDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
NL PD F+Y+I I LC D ++ +A K+ PS A Y L G CK
Sbjct: 369 NLSPDVFTYTILINGLCIED--QVAEANRLFQKMKNERIFPSSATYNSLIHGYCK----- 421
Query: 599 EAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
+ E+ + + +EM G P + S +
Sbjct: 422 -------------------------------EYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 659 ISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
I G C I+ A ++ + + ++ D + Y + H K+
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIV--PDVVTYTALIDAHFKE 492
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 121/300 (40%), Gaps = 2/300 (0%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N YN + ++ + A L M+S P + ILI +
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
+++KM+N+ + P YN ++ + +++ AL + + G++ +TF L+
Sbjct: 394 NRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
G C I + + M K PDV YT L+ + N+ LR++ +M + + P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
+ +A ++ G GR+ ++E + + + L+E +
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFF 572
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
D+ S G D+ Y ++++G + L I+ G+ P+ L V LL + +A
Sbjct: 573 SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL-VNQLLARFYQA 631
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 138/301 (45%), Gaps = 12/301 (3%)
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
F+ L+D+ S + +G+++ LI + FE+A V+ + PD + +L
Sbjct: 119 FNALEDIQSPKF--SIGVFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNG 173
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF--VEKKGPIMALE-VFSYLKEKGYV 509
+R ++ + Q M G ++ D+ +F +F K+G E + + G
Sbjct: 174 LVRRRRFDSVWVDYQLMISRG--LVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 510 -SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
+V IY I + L + +M++A +F+ + + P+ ++YS I + G ++QA
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ +I+ +P++ + L G CK E+ A L + P ++Y+ + C
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH-MVKFGVDPNLYVYNCLIHGHC 350
Query: 629 KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
KS + + +G+L+EM P + +I+G+C + EA ++F ++ ++ S
Sbjct: 351 KSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Query: 689 T 689
T
Sbjct: 411 T 411
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 174/400 (43%), Gaps = 3/400 (0%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LV+GL + ++D+ + +L M PD Y +++ L +G++ L + E+M
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
PDV+ Y T+I + + G E+ +K+ G Y LVE
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
++L+D+ G D+ YN+L+ C E+ + Q + GLE + ++ LL
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVF-SYLKEKGYVSV 511
+ + ++L M + + P + + + + A++ F L++K +
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
YN ++ ++ K G + A+ L + P +Y+ I G +K+A E +++
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN 631
+++ P + L G C+ ++EA ++++ N +G Y L + CK
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE-TSNRGNGIRGSTYRLVIQGLCKKK 503
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
+ E I V+ M+ GC P + +A++ G+ + G EA
Sbjct: 504 EIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 36/314 (11%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
+YN CM + A + + G PP + +L+ + R V E M
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM 270
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM----------- 272
+ G P + YN +++ R G+L+ SV GL+ VT+
Sbjct: 271 AVE-GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 273 ------------------------VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
+L+ GLC+A + ++ +M E+ C PD+ Y
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
++ + +G +D + + +K P ++ Y ++I GL+ G +++ L+ +M G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
D SL+ F N V +LK+ + G Y +I+GLC + E A
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 429 KLFQVTIQEGLEPD 442
++ ++ + G +PD
Sbjct: 510 EVVEIMLTGGCKPD 523
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 155/371 (41%), Gaps = 5/371 (1%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY-EK 222
+YN + + H R A L E M G PP + +IR D G + + ++
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAG 282
++N G P + Y +++ + R A+ V +D +G + VT+ LV C+ G
Sbjct: 236 LQN--GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRG 293
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
++E+ V+ + + Y L+ L D + M + P V+ Y
Sbjct: 294 NLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYN 353
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+I GL + F +M + L D Y +++ + V +LL L ++
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNT 413
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
L YN++I+GL +KA +L+ + G+ PD ++ + L+ + A +E
Sbjct: 414 CCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEA 473
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVD-IYNILMDS 520
++L++ G + R + KK I MA+EV + G + IY ++
Sbjct: 474 GQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Query: 521 LHKVGEMKKAL 531
+ ++G +A+
Sbjct: 534 VEEMGMGSEAV 544
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 1/284 (0%)
Query: 192 GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
G P+ F IL++ H G + V E+M+ P Y+ +MD L
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 252 ALSVYDD-FKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLV 310
A+ +++D ++G+ + VTF V++ G C+AG ++ ++L M++ C P+V+ Y+ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
G + + ++E+KK ++ D + Y T++ G +E L EMK+
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
D Y ++ + + +L S G + G Y ++ LC + EKA K
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
V + G+ P + L+V E+ E ++L ++G
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 144/352 (40%), Gaps = 6/352 (1%)
Query: 124 LRRVTPSLVA-----EVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHH 178
+ RV PSL A +L LS K +A+ G N +N +N
Sbjct: 153 IARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDI 212
Query: 179 RAADQLPELMDSQG-KPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYN 237
A + E M G P+ + L+ R ++E M +K G+ P +N
Sbjct: 213 NFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFN 272
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+++ R G ++ A + D K++G + + L+ G C+ G+I E + +++
Sbjct: 273 VMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKT 332
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
+ D YT L+ G D +++ EMK R D + Y I+ GLS+ GR EE
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+ + S+G +++ Y ++ + ++ L + G +N L+
Sbjct: 393 LQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVR 452
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
LC E ++ ++ GL P S ++ + +++ + ++LL +
Sbjct: 453 LCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 189/474 (39%), Gaps = 36/474 (7%)
Query: 123 KLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
K + ++ ++K + +P F+ A +QKG++HN A+Y+ + R+ A D
Sbjct: 50 KTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVD 109
Query: 183 QLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDA 242
+ M + E F L+R S + +V ++ ++ VKP + + ++
Sbjct: 110 AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169
Query: 243 LIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM-REKLCR 300
LI +G ++L+ + K + GL F +LVK C+ G I+ V+ M R +
Sbjct: 170 LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISY 229
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEM-KKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
P+ Y+ L+ L + ++E+M K+ + PD + + +I G G VE
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+ MK G + Y +L+ F V K+ ++ +G + D Y L+ C
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDD 479
+ ++A KL D L+ +L + R E ++L Q G +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL--- 406
Query: 480 LARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEING 539
KG Y I++++L GE++KA+ ++
Sbjct: 407 ----------NKGS--------------------YRIILNALCCNGELEKAVKFLSVMSE 436
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
+ P +++ ++ + G + + + IP ++ + + +CK
Sbjct: 437 RGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 39/299 (13%)
Query: 141 NPTLSFKFFHWAE-KQKGYHH-NFASYNAFAYCMNRNNHHRAADQLPELMDS-QGKPPSE 197
N ++F F E K+ G + N +Y+ C+ ++ + A +L E M S +G P
Sbjct: 209 NGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDP 268
Query: 198 KQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYD 257
F ++I AG R + + M+ K G P V+ Y+ +M+ + G + A +D
Sbjct: 269 VTFNVMINGFCRAGEVERAKKILDFMK-KNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 258 DFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG 317
+ K+ GL + V + L+ C+ G DE +++LG M+ CR D Y V++R L +G
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEG 387
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG--------- 368
+ L++ ++ + V + +Y I+ L G +E+ M +G
Sbjct: 388 RSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWN 447
Query: 369 HLIDRAI--------------------------YGSLVESFVAVNKVGAGFDLLKDLVS 401
L+ R +G++VES K+ F+LL LVS
Sbjct: 448 ELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/453 (17%), Positives = 187/453 (41%), Gaps = 38/453 (8%)
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
V ++ K + G Y+ ++D L+R ++ K + + F+ L+
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 276 KGLCQAGRIDEMLEVLGRMRE-KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR- 333
+ ++ D+++E+ ++ +P + A + + +L+ G ++ ++ K +
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI-YGSLVESFVAVNKVGAG 392
++P+ + ++ G + +++ +EMK G +I Y +L++ A ++
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 393 FDLLKDLVS-SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
+L +D++S G D +N +I G C + E+A K+ + G P+ + L+
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 452 LYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSV 511
+ + +++ + +++K G L GY +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLK---------------------------LDTVGYTT- 343
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
LM+ + GE +A+ L E+ + + D+ +Y++ + G ++A + ++
Sbjct: 344 -----LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN 631
+ +Y+ + LC GE+++A+ + + P ++ V+ C+S
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFL-SVMSERGIWPHHATWNELVVRLCESG 457
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
E + VL ++ G PG AV+ +CK
Sbjct: 458 YTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 179/420 (42%), Gaps = 38/420 (9%)
Query: 260 KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNL 319
++ G + T+ VL+ L + + + +L +M+ + CR + L+R
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 320 DGCLRVWEEMKK-DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK-GHLIDRAIYG 377
D + ++ ++ RV+P + A +T + L + G V L K G + I+
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI-YNNLIEGLCNLNKFEKAHKLFQVTI- 435
LV+ + F +++++ SG I Y+ L++ L ++ ++A +LF+ I
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM 495
+EG+ PD ++ ++ + A +E K+L M+K G P
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC-----------------NP-- 301
Query: 496 ALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
+V Y+ LM+ KVG++++A FDE+ LK D+ Y+ + C
Sbjct: 302 --------------NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 556 HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
GE +A + ++ C Y + +GL G +EA+ ++ D G+
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML-DQWGSEGVHL 406
Query: 616 MEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+ Y + + C + + EK + L+ M ++G P + + ++ +C+ G E +V
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 150/376 (39%), Gaps = 50/376 (13%)
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+ K + KG + A Y L+++ V K A +L + R ++ NL+
Sbjct: 75 IFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHF 134
Query: 419 CNLNKFEKAHKLFQ-VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL-QQMEKLGFPV 476
+ +K ++F + + ++P ++ L L ++ + KLL LG
Sbjct: 135 SRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG--- 191
Query: 477 IDDLARFFSIFVE---KKGPI-MALEVFSYLKEKG--YVSVDIYNILMDSLHKVGEMKKA 530
+ F+I V+ K G I A V +K G Y + Y+ LMD L K+A
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 531 LSLF-DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
+ LF D I+ + PD ++++ I GE+++A + + + + C P++ Y L
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
G CK+G+I EA +E+ + G
Sbjct: 312 GFCKVGKIQEAKQ------------------------------------TFDEVKKTGLK 335
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTADLVM 709
V + +++ C+ G +EA K+ ++ + +DT+ Y+ L + ++ +
Sbjct: 336 LDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR--CRADTLTYNVILRGLSSEGRSEEAL 393
Query: 710 SGLKFFGLESKLKSKG 725
L +G E +KG
Sbjct: 394 QMLDQWGSEGVHLNKG 409
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 3/312 (0%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
++FG KP YN ++ ++G D AL ++D+ + + VTF L+ GLC+ R+
Sbjct: 145 DEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 285 DEMLEVLGRMREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
E L++ M + RP V Y L++ L G L ++ +E + +++ D Y+T
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYST 263
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
+I+ L GR E ++ +EM KG D Y L+ F N + +L ++V G
Sbjct: 264 LISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY 463
+ D+ YN ++ + K+E+A LF+ + G PD LS + + E + E
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 464 KLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
+L +M G+ P D L F E + +V S L D++++++ ++
Sbjct: 384 VILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMC 443
Query: 523 KVGEMKKALSLF 534
K + ++ L
Sbjct: 444 KEPVISDSIDLL 455
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 1/280 (0%)
Query: 163 ASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEK 222
+YN + +++ A +L + M + P+ F LI R +
Sbjct: 153 CTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHD 212
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAG 282
M +GV+P V +Y ++ AL + G L A + D+ E + + + L+ L +AG
Sbjct: 213 MLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
R +E+ +L M EK C+PD Y VL+ + + + RV +EM + ++PDV++Y
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYN 332
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
I+ + EE LF++M +G D Y + + + +L +++
Sbjct: 333 MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
GY+ ++ LC K E K+ ++ G+ D
Sbjct: 393 GYKPRRDRLEGFLQKLCESGKLEILSKVIS-SLHRGIAGD 431
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 6/201 (2%)
Query: 498 EVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHV 557
E S + E G YNIL+ + G AL LFDE+ +KP ++ I
Sbjct: 139 ERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 558 DLGEIKQACECHNKIIEMSCI-PSIAAYKCLTKGLCKIGEIDEAMMLVRDCL-GNVTSGP 615
+K+A + + ++++ + P++ Y L K LC+IGE+ A L + G +
Sbjct: 199 KDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 616 MEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+YS + K+ + +V +L EM ++GC P V + +I+G C E A +V
Sbjct: 259 A--IYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 676 SNLRERKLLTESDTIVYDEFL 696
+ E+ L + D I Y+ L
Sbjct: 317 DEMVEKGL--KPDVISYNMIL 335
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 152/399 (38%), Gaps = 72/399 (18%)
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVM 339
+ G +++M E L + E +PD Y +L+ G D L++++EM K +V+P +
Sbjct: 130 KCGELEKMKERLSSIDE-FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
+ T+I GL RV+E + +M L
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDM----------------------------------L 214
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
G R + IY +LI+ LC + + A KL + ++ D L+ +A R
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 460 ENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILM 518
+L++M EKG + YN+L+
Sbjct: 275 NEVSMILEEMS----------------------------------EKGCKPDTVTYNVLI 300
Query: 519 DSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI 578
+ + + A + DE+ LKPD SY++ + + + ++A + C
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG 638
P +Y+ + GLC+ + +EA +++ + L P + C+S E +
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK-GYKPRRDRLEGFLQKLCESGKLEILSK 419
Query: 639 VLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSN 677
V++ + +G V S +I MCK I ++ + N
Sbjct: 420 VISS-LHRGIAGDADVWSVMIPTMCKEPVISDSIDLLLN 457
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 8/279 (2%)
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
+ D YN LI G F+ A KLF +++ ++P ++ L+ + R++ K
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-----VSVDIYNILMD 519
+ M K+ + ++ ++ I L LK++ Y V IY+ L+
Sbjct: 209 MKHDMLKVYG--VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
SL K G + + +E++ KPD+ +Y++ I + + A ++++E P
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
+ +Y + +I + +EA L D + P Y + C+ E+ +
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFED-MPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVI 385
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
L+EM+ +G P + +C+ G +E KV S+L
Sbjct: 386 LDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL 424
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 159/348 (45%), Gaps = 4/348 (1%)
Query: 127 VTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
++ L+ EVL + + +F+FF WA +++G+ H+ +YN+ + + +
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 218
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E M ++G E F I ++ + A + ++E M+ K+ K V N ++D+L R
Sbjct: 219 EEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGR 276
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A ++D KE +T+ VL+ G C+ + E + M ++ +PD+ A
Sbjct: 277 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVA 335
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+ V++ L+ ++++ MK P+V +Y +I +E F +M
Sbjct: 336 HNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G D A+Y L+ F K+ ++LLK++ G+ D YN LI+ + N E
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
A +++ IQ +EP + ++ Y A+ E + ++M K G
Sbjct: 456 HATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 153/368 (41%), Gaps = 7/368 (1%)
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
E+L R R + + R F R YN +M L +T + +SV ++
Sbjct: 166 EVLERFRHARKPAFRFF-CWAAERQGFAHDSRT--YNSMMSILAKTRQFETMVSVLEEMG 222
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
GL TF + +K A + + + M++ + V L+ L + L
Sbjct: 223 TKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLG 280
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
+V + K+R P++M Y ++ G + E ++ +M +G D + ++
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 381 ESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE 440
E + K L + S G ++ Y +I C + E A + F + GL+
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 441 PDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLAR-FFSIFVEKKGPIMALEV 499
PD L+ + K+++ Y+LL++M++ G P + +K P A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 500 FS-YLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVD 558
++ ++ + S+ +N++M S + ++++E+ + PD SY++ I +
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 559 LGEIKQAC 566
G+ ++AC
Sbjct: 521 EGKSREAC 528
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
R SDA ++++HV M++K G P V Y ++ + ++ A+ +DD + GL
Sbjct: 347 RKKSDA---IKLFHV---MKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGL 399
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ + L+ G ++D + E+L M+EK PD Y L++++ Q + R
Sbjct: 400 QPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATR 459
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++ +M ++ +EP + + I+ E G +++EM KG D Y L+ +
Sbjct: 460 IYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLI 519
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
K L++++ G + L YN
Sbjct: 520 GEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM 495
++G D + ++ + A+ ++ E +L++M G ++ F K
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 496 ALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
A+ +F +K+ + + V+ N L+DSL + K+A LFD++ P+ +Y++ +
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 306
Query: 555 CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG 614
+ + +A N +I+ P I A+ + +GL + + +A+ L + +
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-VMKSKGPC 365
Query: 615 PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKV 674
P Y++ + CK + E I ++M+ G P V + +I+G +GT ++ V
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG---FGTQKKLDTV 422
Query: 675 FSNLRE 680
+ L+E
Sbjct: 423 YELLKE 428
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 113/291 (38%), Gaps = 4/291 (1%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D Y ++ IL + + V EEM + + + + + ++ +F
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
+ MK I L++S + K+G +L D + + ++ Y L+ G C +
Sbjct: 253 ELMKKYKFKIGVETINCLLDS-LGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG-FPVIDDL 480
+A +++ I +GL+PD ++ +L +++ + KL M+ G P +
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 481 ARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEING 539
F ++ A+E F + + G +Y L+ ++ L E+
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
PD +Y+ I + + A +NK+I+ PSI + + K
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKS 482
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 162/372 (43%), Gaps = 4/372 (1%)
Query: 126 RVTPSLVAEVLKVQTNPTL-SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRA-ADQ 183
RV+ +LV +VLK N + +FF WA + + H+ SY+ + + D
Sbjct: 65 RVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDF 124
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
L E + S K F I+ R +S A + +M +FG+KP V ++++ +L
Sbjct: 125 LIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMV-EFGIKPCVDDLDQLLHSL 183
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
H++ A + K G+ T+ +LV+G + +V M E+ C D+
Sbjct: 184 CDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDL 243
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
AY L+ L G++DG ++++EM ++PD ++A I + G V Y +
Sbjct: 244 LAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
MK + + + ++++ KV + LL +++ G D YN+++ C+ +
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCE 363
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVIDDLAR 482
+A KL + PD + +L L R + ++ + M E+ +P +
Sbjct: 364 VNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTV 423
Query: 483 FFSIFVEKKGPI 494
V KKG +
Sbjct: 424 MIHGLVRKKGKL 435
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 130/264 (49%), Gaps = 11/264 (4%)
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFS 485
+A + F ++ G++P + LL + K + + + + + GF ++ A+ +S
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK--GFGIVPS-AKTYS 212
Query: 486 IFVEKKGPIM----ALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEING 539
I V I A +VF + E+ V VD+ YN L+D+L K G++ +F E+
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCV-VDLLAYNALLDALCKSGDVDGGYKMFQEMGN 271
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE 599
LKPD++S++I I + D G++ A + +++ +P++ + + K LCK ++D+
Sbjct: 272 LGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDD 331
Query: 600 AMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
A +L+ D + + P + Y+ + + C + + +L+ M + C P + V+
Sbjct: 332 AYLLL-DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 660 SGMCKYGTIEEARKVFSNLRERKL 683
+ + G + A +++ + ERK
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKF 414
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 113/280 (40%), Gaps = 3/280 (1%)
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
R + M + ++P V ++ L + V F + K G + Y LV +
Sbjct: 159 RAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
+ + +++ DL YN L++ LC + +K+FQ GL+PD
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSY 502
S + Y +A + + YK+L +M++ P + + + A +
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 503 LKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
+ +KG YN +M E+ +A L ++ PD +Y++ + + +G
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLC-KIGEIDEA 600
+A E + E P++A Y + GL K G+++EA
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 208/486 (42%), Gaps = 65/486 (13%)
Query: 142 PTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL------PELMDSQ---- 191
P+LS+ FF W + H+ S + ++ H + A QL EL+ S
Sbjct: 60 PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119
Query: 192 ------GKPPSEKQ--FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
+ P + F L+ ++ AG V+E++R+ G+KP + ++++L
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS-CGLKPHLQACTVLLNSL 178
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
++ D ++ + G+ + VLV ++G ++ ++L M EK PD+
Sbjct: 179 VKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDI 238
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
F Y L+ + + L V + M++ V P+++ Y + I G S GR+ E LF+E
Sbjct: 239 FTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE 298
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
+K + Y +L++ + +N + L + + S G+ + YN+++ LC +
Sbjct: 299 IKDDV-TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGR 357
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
+A++L + +EPD ++ L+ Y + + M + K+ ++M + G + D+ +
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL--DMYSY 415
Query: 484 FSIFVEKKGPIMAL-----EVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI 537
++ + ++ L E+FS + EKG+ Y+ L+D + + + L +E
Sbjct: 416 KAL-IHGFCKVLELENAKEELFSMI-EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
L D +A Y+ L + +CK+ ++
Sbjct: 474 EKRGLCAD-----------------------------------VALYRGLIRRICKLEQV 498
Query: 598 DEAMML 603
D A +L
Sbjct: 499 DYAKVL 504
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 2/289 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++KG + +YN + + H A + + M+ G P+ + I S GR
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
++ ++++ V Y ++D R +D AL + + + G VT+
Sbjct: 290 REATRLFREIKDD--VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
+++ LC+ GRI E +L M K PD L+ ++ ++V ++M +
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
++ D+ +Y +I G +E M KG A Y LV+ F NK
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEIT 467
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
LL++ G AD+ +Y LI +C L + + A LF+ ++GL D
Sbjct: 468 KLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGD 516
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 170/426 (39%), Gaps = 71/426 (16%)
Query: 261 EDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLD 320
ED D V F L+ +AG I++ + V ++R +P + A TVL+ LV Q D
Sbjct: 127 EDPEDVSHV-FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTD 185
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
+++++M K V ++ Y ++ S G E+ L EM+ KG D Y +L+
Sbjct: 186 TVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLI 245
Query: 381 ESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE 440
+ + + + SG ++ YN+ I G + +A +LF+ I++ +
Sbjct: 246 SVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVT 304
Query: 441 PDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
+ ++ L+ Y ++ +L + ME GF
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS------------------------- 339
Query: 501 SYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
G V+ YN ++ L + G +++A L E++G ++PD+ + + I + +
Sbjct: 340 -----PGVVT---YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIE 391
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMY 620
++ A + K+IE + +YK L G CK+ E++ A E ++
Sbjct: 392 DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK---------------EELF 436
Query: 621 SLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
S M+++G PG S ++ G +E K+ +
Sbjct: 437 S---------------------MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 681 RKLLTE 686
R L +
Sbjct: 476 RGLCAD 481
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 127/276 (46%), Gaps = 14/276 (5%)
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
L++ YA+A + + + +Q+ G P + + V+++ ++F + + G
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 508 YVS-VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
V+ + +YN+L+ + K G+ +KA L E+ + PD F+Y+ I + +A
Sbjct: 199 VVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL 258
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH 626
+++ P+I Y G + G + EA L R+ +VT+ + Y+ +
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV--TYTTLIDG 316
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
C+ ND ++ + + M +G PG V ++++ +C+ G I EA ++ + + +K+ E
Sbjct: 317 YCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI--E 374
Query: 687 SDTIVYDEFLIDHMK--------KKTADLVMSGLKF 714
D I + + + K K ++ SGLK
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
Query: 161 NFASYNAF--AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYH 218
N +Y YC R N A +L E+M+S+G P + ++R + GR
Sbjct: 306 NHVTYTTLIDGYC--RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
+ +M K ++P N +++A + + A+ V E GL + ++ L+ G
Sbjct: 364 LLTEMSGK-KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
C+ ++ E L M EK P Y+ LV Q D ++ EE +K + DV
Sbjct: 423 CKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADV 482
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
Y +I + +V+ VLF+ M+ KG + D I+ ++ ++ KV L
Sbjct: 483 ALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDV 542
Query: 399 LVSSGYRADLGIYNNL 414
+ + +L +Y ++
Sbjct: 543 MYNRRLMVNLKLYKSI 558
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 95/236 (40%), Gaps = 1/236 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
+ +G+ +YN+ + + R A++L M + P LI +
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ V +KM G+K ++ Y ++ + L+ A E G T+
Sbjct: 394 VSAVKVKKKMIES-GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LV G + DE+ ++L ++ DV Y L+R + +D ++E M+K
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+ D + + T+ G+V E LF M ++ +++ +Y S+ S+ N V
Sbjct: 513 LVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 6/267 (2%)
Query: 175 NNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVF 234
+N HR + LM + G P + +I +R + GR + +++ K P +
Sbjct: 141 SNVHRVLN----LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTY 195
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
YN ++ L + L + D+ ++D + + V+F +L+ +C + + E + ++ +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
+ +PD F Y +++ + V+++MK++ VEPD + Y T+I GLS GR
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
VEE + K M G+ D A Y SL+ + LL+++ + G + YN
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNT 375
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLE 440
L+ GLC +K +L+++ G++
Sbjct: 376 LLHGLCKARLMDKGMELYEMMKSSGVK 402
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 1/229 (0%)
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E+ D P F ILI ++ ++ K+ N G KP FLYN IM
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA-GFKPDCFLYNTIMKGFCT 277
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A+ VY KE+G++ +++T+ L+ GL +AGR++E L M + PD
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
YT L+ + +G G L + EEM+ P+ Y T++ GL +++G L++ MK
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
S G ++ Y +LV S V KV +++ V S +D Y+ L
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 9/331 (2%)
Query: 268 RVTFMVLVKGLCQA--GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRV 325
R TF++L+ C+A I + VL M PD + VR L G +D +
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 326 WEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL-IDRAIYGSLVESFV 384
+E+ + PD Y ++ L + Y EM+ + D + L+++
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
+ L+ L ++G++ D +YN +++G C L+K +A +++ +EG+EPD +
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFS 501
+ L+ ++A R+E L+ M G+ D A + S+ K + AL +
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYE--PDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 502 YLKEKGYVSVD-IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
++ +G D YN L+ L K M K + L++ + + +K +S Y+ + V G
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
++ +A E + ++ + +AY L L
Sbjct: 420 KVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 4/317 (1%)
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
V+ V M N G++P + + +L TG +D A + + E + T+ L+
Sbjct: 143 VHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 276 KGLCQAGRIDEMLEVLGRMREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
K LC+ + + E + MR+ +PD+ ++T+L+ + NL + + ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD Y TI+ G + E ++K+MK +G D+ Y +L+ +V
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
LK +V +GY D Y +L+ G+C + A L + G P+ + LL
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDD-LARFFSIFVEKKGPIMALEVFSY-LKEKGYVSVD 512
+A+ M+ +L + M+ G + + A V+ A EVF Y + K
Sbjct: 382 KARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDAS 441
Query: 513 IYNILMDSLHKVGEMKK 529
Y+ L +L + + K+
Sbjct: 442 AYSTLETTLKWLKKAKE 458
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 148/337 (43%), Gaps = 9/337 (2%)
Query: 360 LFKEMKSKGHL-IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS--GYRADLGIYNNLIE 416
LF + + + +D + S+++S+ ++ V L + ++ S +R + L+
Sbjct: 71 LFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLS 130
Query: 417 GLCNL--NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLG 473
C + H++ + + GLEPD ++ + E R++ L++++ EK
Sbjct: 131 HACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS 190
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKAL 531
P + K + E +++ V D+ + IL+D++ +++A+
Sbjct: 191 PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM 250
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
L ++ A KPD F Y+ + L + +A + K+ E P Y L GL
Sbjct: 251 YLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 592 CKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPG 651
K G ++EA M ++ + + P Y+ + C+ ++ + +L EM +GC P
Sbjct: 311 SKAGRVEEARMYLK-TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN 369
Query: 652 NVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
+ + ++ G+CK +++ +++ ++ + ES+
Sbjct: 370 DCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 86/221 (38%), Gaps = 45/221 (20%)
Query: 542 LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID--- 598
L+PD + IA+ + G + +A + ++ E P Y L K LCK ++
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 599 ---------------------------------EAMMLVRDCLGNVTSGPMEFMYSLTVI 625
EAM LV LGN P F+Y+ +
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK-LGNAGFKPDCFLYNTIMK 273
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
C + + +GV +M ++G P + + +I G+ K G +EEAR + +
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY-- 331
Query: 686 ESDTIVYDEFLIDHMKKKTADLVMSGLKFFGLESKLKSKGC 726
E DT Y L++ M +K L L +++++GC
Sbjct: 332 EPDTATYTS-LMNGMCRKG-----ESLGALSLLEEMEARGC 366
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 20/410 (4%)
Query: 137 KVQTNPTLS---FKFFHWAEKQKGYHHNFASY----NAFAYCMNRNNHHR-----AADQL 184
K++ +P + F F+WA + H+ S+ + A ++ +R AA+
Sbjct: 85 KIRNHPLYAHYDFAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPC 144
Query: 185 PELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
P P E F I + A + ++ M+ KP V +YN +++ +
Sbjct: 145 PCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYV 204
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVF 304
++G +D AL Y ++ + TF +L+ G C++ + D L++ M+EK C P+V
Sbjct: 205 KSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVV 264
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
++ L+R + G ++ +++ EM + ++ GL GRV++ L ++
Sbjct: 265 SFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDL 324
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+K L YGSLVE NK +++++L G L+EGL +
Sbjct: 325 LNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRT 384
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARF 483
EKA + + G+ PD ++ LL + + +L G+ P
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 484 FSIFVE----KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKK 529
S F + K+G ++ E+ L + + YN LMD L G+ +
Sbjct: 445 VSGFTKEGRRKEGEVLVNEM---LDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 9/322 (2%)
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKE--DGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
++ +DA R +D AL +D K DG V + +V G ++G +D+ L
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGV-YNTVVNGYVKSGDMDKALRFYQ 217
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
RM ++ +PDV + +L+ D L ++ EMK+ EP+V+++ T+I G + G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
++EEG + EM G A LV+ +V L+ DL++ Y
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYG 337
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
+L+E LC NK +A ++ + ++G P F++ L+ ++ R E +++M
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 473 GFPVIDDLARF---FSIFVEKKGPIMALEVFSYLKEKGYVSVD-IYNILMDSLHKVGEMK 528
G ++ D F A + KGY + Y++L+ K G K
Sbjct: 398 G--ILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRK 455
Query: 529 KALSLFDEINGANLKPDSFSYS 550
+ L +E+ ++ PD F+Y+
Sbjct: 456 EGEVLVNEMLDKDMLPDIFTYN 477
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 7/255 (2%)
Query: 439 LEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL--GFPVIDDLARFFSIFVEKKGPIMA 496
LEP F S + Y A++M+ M++L G P + + +V+ A
Sbjct: 156 LEPIFRSA---IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKA 212
Query: 497 LEVFSYL-KEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
L + + KE+ V +NIL++ + + AL LF E+ +P+ S++ I
Sbjct: 213 LRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 556 HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
+ G+I++ + ++IE+ C S A + L GLC+ G +D+A LV D L N P
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL-NKRVLP 331
Query: 616 MEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
EF Y V C N A + + ++ E+ ++G P + C+ ++ G+ K G E+A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 676 SNLRERKLLTESDTI 690
+ +L +S T
Sbjct: 392 EKMMNAGILPDSVTF 406
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 154/316 (48%), Gaps = 6/316 (1%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
+P+ V +++ Q++P L+ + F +A +Q + H+ +S+ + R + D +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAK 109
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALI-RT 246
S G P + + F LI+++++A +V + KM +F P+ NRI+D L+
Sbjct: 110 HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKML-EFNFTPQPKHLNRILDVLVSHR 168
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G+L A ++ + G+ ++ +L++ C + ++ G+M E+ PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
+L++ +G ++G + + ++M PD T+I GL + G +EG +EM S
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK 426
KG ++ LV+ F + KV D+++ ++ +G + +I +CN ++ EK
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Query: 427 AHKLFQVTIQEGLEPD 442
+ ++E + D
Sbjct: 345 IKLFLEDAVKEEITGD 360
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 473 GFPVIDDLARFF-SIFVEKKGPIMALEVFSYLKEKGYVSVDIY-NILMDSL--HKVGEMK 528
G+P+ ++ + ++ E K P L F + E + + N ++D L H+ G ++
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR-GYLQ 172
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
KA LF + P++ SY++ + ++ A + K++E +P + +YK L
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 589 KGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA-CKSNDAEKVIGVLNEMMQQG 647
+G C+ G+++ AM L+ D L F+ T+I C ++ L EM+ +G
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNK------GFVPDRTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 648 CPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
P V + ++ G C +G +EEA V + + SDT
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 328
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 245 RTGHLDLALSV----YDDFKEDGLDEERVT--------FMVLVKGLCQAGRIDEMLEVLG 292
R+ HL L L + Y + +D L + R + F L+K +A +++L
Sbjct: 84 RSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFY 143
Query: 293 RMREKLCRPDVFAYTVLVRILVP-QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
+M E P ++ +LV +G L +++ + V P+ +Y ++
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+ Y LF +M + + D Y L++ F +V +LL D+++ G+ D
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---- 259
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
LI GLC+ F++ K + I +G P F SV LV
Sbjct: 260 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF-SVSNCLV 298
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 112/243 (46%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+K V + I+D L + G+ A +++ + E G+ +T+ ++ C +GR +
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
++L M EK PD+ ++ L+ V + + +++EM + + P + Y ++I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
RV++ + M SKG D + +L+ + +V G ++ ++ G A+
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
Y LI G C + + A L I G+ PD+++ +L K + + +L+
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 469 MEK 471
++K
Sbjct: 246 LQK 248
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
I+ R+ D G + +++ +M K G+ P V YN ++D+ +G A + E
Sbjct: 16 IVDRLCKD-GNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
++ + VTF L+ + ++ E E+ M P Y ++ Q +D
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
R+ + M PDV+ ++T+I G RV+ G +F EM +G + + Y +L+
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
F V + A DLL +++S G D ++ ++ GLC+ + KA + +
Sbjct: 194 GFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 37/259 (14%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
+ DV T +V L GN ++ EM + + P+V+ Y +I + GR +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L + M K D + +L+ +FV KV ++ K+++ YN++I+G C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDD 479
++ + A ++ +G PD ++ L+ Y +AKR++N
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN------------------ 168
Query: 480 LARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEIN 538
+E+F + +G V+ + Y L+ +VG++ A L +E+
Sbjct: 169 ----------------GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Query: 539 GANLKPD--SFSYSIAILC 555
+ PD +F +A LC
Sbjct: 213 SCGVAPDYITFHCMLAGLC 231
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 2/216 (0%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+KG N +YN + ADQL M + P F LI +
Sbjct: 38 EKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVS 97
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+Y++M ++ + P YN ++D + +D A + D G + VTF L
Sbjct: 98 EAEEIYKEML-RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ G C+A R+D +E+ M + + YT L+ G+LD + EM V
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEM-KSKGH 369
PD + + ++ GL + + + + + +++ KS+ H
Sbjct: 217 APDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDH 252
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 99/229 (43%), Gaps = 1/229 (0%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV 233
++ +H A L M +G P+ + +I +GR + M K + P +
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK-QINPDI 80
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
++ +++A ++ + A +Y + + +T+ ++ G C+ R+D+ +L
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 140
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
M K C PDV ++ L+ +D + ++ EM + + + + Y T+I G G
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
++ L EM S G D + ++ + ++ F +L+DL S
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 494 IMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
I A +F+ + EKG + +V YN ++DS G A L + + PD ++S
Sbjct: 27 INAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 86
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I V ++ +A E + +++ S P+ Y + G CK +D+A ++ D + +
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML-DSMASKG 145
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P +S + CK+ + + + EM ++G V + +I G C+ G ++ A+
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 673 KVFSNL 678
+ + +
Sbjct: 206 DLLNEM 211
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 117/286 (40%), Gaps = 51/286 (17%)
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
S +AD+ I +++ LC A LF ++G+ P+ L+ ++ + + R +
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 462 FYKLLQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVF-SYLKEKGYVSVDIYNILMD 519
+LL+ M EK P I + + FV+++ A E++ L+ + + YN ++D
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LC---HVDLGEIKQACECHNKIIE 574
K + A + D + PD ++S I C VD G ++ CE H + I
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG-MEIFCEMHRRGI- 181
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
+ + Y L G C++G++D A L
Sbjct: 182 ---VANTVTYTTLIHGFCQVGDLDAAQDL------------------------------- 207
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
LNEM+ G P + +++G+C + +E RK F+ L +
Sbjct: 208 -----LNEMISCGVAPDYITFHCMLAGLC---SKKELRKAFAILED 245
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/280 (17%), Positives = 107/280 (38%), Gaps = 37/280 (13%)
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M + ++ DV+ I+ L G LF EM KG + Y +++SF +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
LL+ ++ D+ ++ LI K +A ++++ ++ + P ++
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
++ + + R+++ ++L M G P + + + + + K +E+F + +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 508 YVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
V+ + Y L+ +VG++ A L
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLL-------------------------------- 208
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
N++I P + C+ GLC E+ +A ++ D
Sbjct: 209 ---NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 4/348 (1%)
Query: 127 VTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
++ L+ EVL + + +F+FF WA +++G+ H+ +YN+ + + +
Sbjct: 158 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVL 217
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E M ++G E F I ++ + A + ++E M+ K+ K V N ++D+L R
Sbjct: 218 EEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGR 275
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A ++D KE +T+ VL+ G C+ + E + M + +PD+ A
Sbjct: 276 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 334
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+ V++ L+ ++++ MK P+V +Y +I +E F +M
Sbjct: 335 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 394
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G D A+Y L+ F K+ ++LLK++ G+ D YN LI+ + N E
Sbjct: 395 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 454
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+++ IQ +EP + ++ Y A+ E + +M K G
Sbjct: 455 HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
++++HV M++K G P V Y ++ + ++ A+ +DD + GL + +
Sbjct: 351 AIKLFHV---MKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 406
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
L+ G ++D + E+L M+EK PD Y L++++ Q + R++ +M ++
Sbjct: 407 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 466
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+EP + + I+ E G ++ EM KG D Y L+ ++ K
Sbjct: 467 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 393 FDLLKDLVSSGYRADLGIYNNL 414
L++++ G + L YN
Sbjct: 527 CRYLEEMLDKGMKTPLIDYNKF 548
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM 495
++G D + ++ + A+ ++ E +L++M G ++ F K
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 496 ALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
A+ +F +K+ + + V+ N L+DSL + K+A LFD++ P+ +Y++ +
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLN 305
Query: 555 CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG 614
+ + +A N +I+ P I A+ + +GL + + +A+ L + +
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-VMKSKGPC 364
Query: 615 PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKV 674
P Y++ + CK + E I ++M+ G P V + +I+G +GT ++ V
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG---FGTQKKLDTV 421
Query: 675 FSNLRE 680
+ L+E
Sbjct: 422 YELLKE 427
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 195/483 (40%), Gaps = 43/483 (8%)
Query: 150 HWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL-PELMDSQGKPPSEKQFEILIRMHS 208
W ++ + + +N + ++ A+ L +L++S+ P+E + +LI+ +
Sbjct: 143 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESR-YVPTEDTYALLIKAYC 201
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPR---VFLYNRIMDALI-RTGHLDLALSVYDDFKEDGL 264
AG R V +M+N V P+ V +YN ++ L+ R G+ + A+ V+ K D
Sbjct: 202 MAGLIERAEVVLVEMQNHH-VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
T+ +++ +A + ++ MR C+P++ YT LV +G +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++E++++D +EPDV Y ++ S G +F M+ G DRA Y +V+++
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
+ +++ G + + L+ K + + + G+EPD
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK 504
+ +L LY + K+L +ME GP A
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEME--------------------NGPCTA-------- 472
Query: 505 EKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
+ YNIL++ K G +++ LF E+ N +PD +++ I + +
Sbjct: 473 -----DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 527
Query: 565 ACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG---PMEFMYS 621
E ++I+ C P K L ++++ ++R VT P S
Sbjct: 528 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKS 587
Query: 622 LTV 624
LTV
Sbjct: 588 LTV 590
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 175/467 (37%), Gaps = 44/467 (9%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
V E + K +P V +N ++DA + A S+Y E T+ +L+K
Sbjct: 141 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 200
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTV----LVRILVPQGNLDGCLRVWEEMKKDRV 334
C AG I+ VL M+ P TV + ++ +GN + + V++ MK+DR
Sbjct: 201 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+P Y +I + + L+ EM+S + Y +LV +F +
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 320
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+ + L G D+ +YN L+E A ++F + G EPD S ++ Y
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 455 EAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
A + + ++M++LG P + S + + + + + E G V D
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDT 439
Query: 514 Y--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
+ N +++ ++G+ K + E+ D +Y+I I + G +++ E +
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 499
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN 631
+ E + P + + +IG + V
Sbjct: 500 LKEKNFRPDVVTWTS------RIGAYSRKKLYV--------------------------- 526
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
K + V EM+ GC P ++S +E+ V +
Sbjct: 527 ---KCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/381 (19%), Positives = 156/381 (40%), Gaps = 9/381 (2%)
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
++K +PDV+ + +I + +E L+ ++ ++ Y L++++
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 389 VGAGFDLLKDLVS---SGYRADLGIYNNLIEGLCNL-NKFEKAHKLFQVTIQEGLEPDFL 444
+ +L ++ + S + +YN IEGL E+A +FQ ++ +P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYL 503
+ ++ LY +A + +KL +M P I + F + A E+F L
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 504 KEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
+E G V +YN LM+S + G A +F + +PD SY+I + + G
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL 622
A ++ + P++ ++ L K ++ + +V++ N P F+ +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVE-PDTFVLNS 444
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ + K+ +L EM C + +I+ K G +E ++F L+E+
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 683 LLTESDTIVYDEFLIDHMKKK 703
D + + + + +KK
Sbjct: 505 F--RPDVVTWTSRIGAYSRKK 523
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 195/483 (40%), Gaps = 43/483 (8%)
Query: 150 HWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQL-PELMDSQGKPPSEKQFEILIRMHS 208
W ++ + + +N + ++ A+ L +L++S+ P+E + +LI+ +
Sbjct: 165 EWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESR-YVPTEDTYALLIKAYC 223
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPR---VFLYNRIMDALI-RTGHLDLALSVYDDFKEDGL 264
AG R V +M+N V P+ V +YN ++ L+ R G+ + A+ V+ K D
Sbjct: 224 MAGLIERAEVVLVEMQNHH-VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
T+ +++ +A + ++ MR C+P++ YT LV +G +
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++E++++D +EPDV Y ++ S G +F M+ G DRA Y +V+++
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
+ +++ G + + L+ K + + + G+EPD
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK 504
+ +L LY + K+L +ME GP A
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEME--------------------NGPCTA-------- 494
Query: 505 EKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
+ YNIL++ K G +++ LF E+ N +PD +++ I + +
Sbjct: 495 -----DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVK 549
Query: 565 ACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSG---PMEFMYS 621
E ++I+ C P K L ++++ ++R VT P S
Sbjct: 550 CLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKS 609
Query: 622 LTV 624
LTV
Sbjct: 610 LTV 612
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 175/467 (37%), Gaps = 44/467 (9%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
V E + K +P V +N ++DA + A S+Y E T+ +L+K
Sbjct: 163 VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAY 222
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTV----LVRILVPQGNLDGCLRVWEEMKKDRV 334
C AG I+ VL M+ P TV + ++ +GN + + V++ MK+DR
Sbjct: 223 CMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+P Y +I + + L+ EM+S + Y +LV +F +
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEE 342
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+ + L G D+ +YN L+E A ++F + G EPD S ++ Y
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 455 EAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
A + + ++M++LG P + S + + + + + E G V D
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG-VEPDT 461
Query: 514 Y--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
+ N +++ ++G+ K + E+ D +Y+I I + G +++ E +
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 521
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN 631
+ E + P + + +IG + V
Sbjct: 522 LKEKNFRPDVVTWTS------RIGAYSRKKLYV--------------------------- 548
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
K + V EM+ GC P ++S +E+ V +
Sbjct: 549 ---KCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/381 (19%), Positives = 156/381 (40%), Gaps = 9/381 (2%)
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
++K +PDV+ + +I + +E L+ ++ ++ Y L++++
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 389 VGAGFDLLKDLVS---SGYRADLGIYNNLIEGLCNL-NKFEKAHKLFQVTIQEGLEPDFL 444
+ +L ++ + S + +YN IEGL E+A +FQ ++ +P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYL 503
+ ++ LY +A + +KL +M P I + F + A E+F L
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 504 KEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
+E G V +YN LM+S + G A +F + +PD SY+I + + G
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL 622
A ++ + P++ ++ L K ++ + +V++ N + S+
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
++ + K+ +L EM C + +I+ K G +E ++F L+E+
Sbjct: 468 LNLYG-RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 526
Query: 683 LLTESDTIVYDEFLIDHMKKK 703
D + + + + +KK
Sbjct: 527 F--RPDVVTWTSRIGAYSRKK 545
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/541 (20%), Positives = 224/541 (41%), Gaps = 35/541 (6%)
Query: 129 PSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELM 188
P + +L+ Q++ + + FF W + G N +Y C+ L ++
Sbjct: 80 PEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNY-----CL-----------LLHIL 123
Query: 189 DSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGH 248
S K P QF + + + V+ V ++ P VF + ++ ++ G
Sbjct: 124 VSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVF--DMLVKGYLKLGL 181
Query: 249 LDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTV 308
++ V+ + + G VT L+ GL + +++ +V M P+ + + +
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 309 LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
L + N E+M+++ EPD++ Y T+++ GR++E + L+K M +
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 369 HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
+ D Y SL++ +V +V G + D YN LI C +++
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV 488
KL + + PD + K ++ + R+ + + ++ +L + ++ F + +
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSL 421
Query: 489 EKKG-PIMALEVFS-YLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPD 545
++G P A + ++E+G+ + YN L++SL + +++AL L ++ N D
Sbjct: 422 CQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLD 481
Query: 546 SFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
+ +Y I C +G ++A ++ + P L G CK + D+A L
Sbjct: 482 AKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERL-- 539
Query: 606 DCLGNVTSGPMEF------MYSLTVIHACKSNDAEKVIGVLNEMMQQ-GCPPGNVVCSAV 658
++ MEF Y+ V C++ K L E MQ+ G P + C +
Sbjct: 540 -----LSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYL 594
Query: 659 I 659
I
Sbjct: 595 I 595
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
+NIL + ++ +++ +PD +Y+ + + G +K+A + +
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
+P + Y L KGLCK G + EA + + P Y+ + CK
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR-MVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKL 683
++ +L+EM+ P C ++ G + G + A LR K+
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKV 407
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 121/249 (48%), Gaps = 3/249 (1%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+KP + I+ + G A+ ++ G + + VT ++ +AG +D
Sbjct: 205 GIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMA 264
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
L + R R + R D ++ L+RI GN DGCL ++EEMK V+P+++ Y +I
Sbjct: 265 LSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDS 324
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
+ R + +++K++ + G + + Y +LV ++ + +++ G
Sbjct: 325 MGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLT 384
Query: 408 LGIYNNLIEGLCNLNKF-EKAHKLFQ-VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+ +YN L+ +C N++ ++A ++FQ + E +PD + L+ +YA + R+
Sbjct: 385 VILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 466 LQQMEKLGF 474
L QM + GF
Sbjct: 444 LLQMREAGF 452
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 4/312 (1%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
YN ++ +++L + M +G P F +I G R +EKM
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
+ FG +P ++DA R G++D+ALS+YD + + + VTF L++ +G
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
D L + M+ +P++ Y L+ + +++++ + P+ YA +
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK-VGAGFDLLKDLVS-S 402
+ ++ +++EMK KG + +Y +L+ S A N+ V F++ +D+ +
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCE 415
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
D +++LI + +A + G EP + ++ Y +AK++++
Sbjct: 416 TCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDV 475
Query: 463 YKLLQQMEKLGF 474
+ Q+ +LG
Sbjct: 476 VRTFDQVLELGI 487
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 106/238 (44%)
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
V LYN M ++ L+ + ++D+ E G+ + TF ++ Q G +E
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
+M C PD ++ GN+D L +++ + ++ D + ++T+I G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+ +++EMK+ G + IY L++S + + KDL+++G+ + Y
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
L+ + A +++ ++GL + LL + A+ + ++ +++ Q M+
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/324 (17%), Positives = 137/324 (42%), Gaps = 3/324 (0%)
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
E + + V +K ++ +++ ++ M E+ +PD +T ++ G + +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
E+M EPD + A +I G V+ L+ +++ ID + +L+ +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVS 293
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
++ +++ + G + +L IYN LI+ + + +A +++ I G P++ +
Sbjct: 294 GNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL-ARFFSIFVEKKGPIMALEVFSYLKE 505
L+ Y A+ ++ + ++M++ G + L S+ + + A E+F +K
Sbjct: 354 AALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 506 KGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIK 563
D ++ L+ G + +A + ++ A +P F + I C+ ++
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 564 QACECHNKIIEMSCIPSIAAYKCL 587
++++E+ P CL
Sbjct: 474 DVVRTFDQVLELGITPDDRFCGCL 497
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 138/334 (41%), Gaps = 22/334 (6%)
Query: 119 TELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHH 178
TE ++ VT S + + V N + K G N YN M R
Sbjct: 273 TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYE-EMKALGVKPNLVIYNRLIDSMGRAKRP 331
Query: 179 RAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNR 238
A + + + + G P+ + L+R + A G +Y +M+ K G+ V LYN
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK-GLSLTVILYNT 390
Query: 239 IMDALIRTGHLDLALSVYDDFKE-DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
++ ++D A ++ D K + D + TF L+ +GR+ E L +MRE
Sbjct: 391 LLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREA 450
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
P +F T +++ +D +R ++++ + + PD ++ ++ E G
Sbjct: 451 GFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIG 510
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF------DLLKDLVSSGYRADLGIY 411
++ K+K L G +V+ V G +L+ + S +A L
Sbjct: 511 KLIGCVEKAKPKL------GQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYL--- 561
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
N LI+ NLNK E+A ++ Q+ GLE D +
Sbjct: 562 NCLIDLCVNLNKLERACEILQL----GLEYDIYT 591
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 1/168 (0%)
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
V +YN+ M K +++K+ LFDE+ +KPD+ +++ I C G K+A E
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
K+ C P + + G +D A+ L +L I+
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
N + + + EM G P V+ + +I M + +A+ ++ +L
Sbjct: 295 N-YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 4/348 (1%)
Query: 127 VTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
++ L+ EVL + + +F+FF WA +++G+ H +YN+ + + +
Sbjct: 159 LSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVL 218
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E M ++G E F I ++ + A + ++E M+ K+ K V N ++D+L R
Sbjct: 219 EEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMK-KYKFKIGVETINCLLDSLGR 276
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A ++D KE +T+ VL+ G C+ + E + M + +PD+ A
Sbjct: 277 AKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 335
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+ V++ L+ ++++ MK P+V +Y +I +E F +M
Sbjct: 336 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMV 395
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G D A+Y L+ F K+ ++LLK++ G+ D YN LI+ + N E
Sbjct: 396 DSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPE 455
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+++ IQ +EP + ++ Y A+ E + +M K G
Sbjct: 456 HGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 4/202 (1%)
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
++++HV M++K G P V Y ++ + ++ A+ +DD + GL + +
Sbjct: 352 AIKLFHV---MKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
L+ G ++D + E+L M+EK PD Y L++++ Q + R++ +M ++
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQN 467
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+EP + + I+ E G ++ EM KG D Y L+ ++ K
Sbjct: 468 EIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 393 FDLLKDLVSSGYRADLGIYNNL 414
L++++ G + L YN
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKF 549
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE-KG 507
++ + A+ ++ E +L++M G ++ F K A+ +F +K+ K
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKF 260
Query: 508 YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ V+ N L+DSL + K+A LFD++ P+ +Y++ + + + +A
Sbjct: 261 KIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAAR 319
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
N +I+ P I A+ + +GL + + +A+ L + + P Y++ +
Sbjct: 320 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-VMKSKGPCPNVRSYTIMIRDF 378
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
CK + E I ++M+ G P V + +I+G +GT ++ V+ L+E
Sbjct: 379 CKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG---FGTQKKLDTVYELLKE 428
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 193/477 (40%), Gaps = 46/477 (9%)
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
R + V RV +YN +M R+G A + D ++ G + ++F L+ ++G
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 284 IDEML--EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
+ L E+L +R RPD Y L+ NLDG ++V+E+M+ R +PD+ Y
Sbjct: 276 LTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTY 335
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
+I+ G E LF E++ KG D Y SL+ +F ++ + +
Sbjct: 336 NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ-VTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G+ D YN +I + + A +L++ + G PD ++ L+ +A R
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDS 520
L+ +M +G ++ Y+ L+
Sbjct: 456 EAAALMSEMLDVGIK---------------------------------PTLQTYSALICG 482
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
K G+ ++A F + + KPD+ +YS+ + + E ++A + +I PS
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVL 640
Y+ + GL K D+ +RD P+E + S+ V C A + L
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLE-ISSVLVKGECFDLAARQ----L 597
Query: 641 NEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE-----RKLLTESDTIVY 692
+ G N +++ G EA ++ L+E ++L+TE+ +++
Sbjct: 598 KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLH 654
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 181/424 (42%), Gaps = 12/424 (2%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
Y +C N H+ A Q+ + G SE + ++ ++ G + V +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 225 NK---FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
K F P +Y I++A + A SV + ++ G + T+ L+ Q
Sbjct: 744 TKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
G + + M P V + +L+ L G L+ V EE++ + +
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
++ + G + E ++ MK+ G+L +Y ++E +V ++ ++
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
+ ++ +L I+N++++ + ++K +++Q + GLEPD + L+++Y +R E
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 462 FYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMD 519
Y L+QQM LG P +D S F ++K A ++F L KG + Y+ +M
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI----IEM 575
G KA L + A ++P + + ++ + G ++A + + + +E+
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVEL 1100
Query: 576 SCIP 579
+ +P
Sbjct: 1101 TTLP 1104
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 144/622 (23%), Positives = 257/622 (41%), Gaps = 54/622 (8%)
Query: 131 LVAEVLKV---QTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPEL 187
+VA +L V +L+ + F AE G YNA +R+ A +L +
Sbjct: 193 MVAAILGVLGRWNQESLAVEIFTRAEPTVG--DRVQVYNAMMGVYSRSGKFSKAQELVDA 250
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLR---VYHVYEKMRNKFGVKPRVFLYNRIMDALI 244
M +G P F LI +G GL + + +RN G++P YN ++ A
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSG-GLTPNLAVELLDMVRNS-GLRPDAITYNTLLSACS 308
Query: 245 RTGHLDLALSVYDDFKEDGLDEERVTF--MVLVKGLC----QAGRIDEMLEVLGRMREKL 298
R +LD A+ V++D + + T+ M+ V G C +A R+ LE+ G
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF---- 364
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
PD Y L+ + N + V+++M+K D M Y TII G+++
Sbjct: 365 --PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 359 VLFKEMKS-KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
L+K+MK G D Y L++S N+ L+ +++ G + L Y+ LI G
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
K E+A F ++ G +PD L+ +L + + L + M G
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 478 DDLARF--FSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSL---HKVGEMKKALS 532
L + E + + + + G ++I ++L+ ++K A++
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT 602
Query: 533 LFDEINGANLKPDSFSYSIAIL-CHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
NG L+ D+ ++IL + G +A E ++E + + + +T+ L
Sbjct: 603 -----NGYELENDTL---LSILGSYSSSGRHSEAFE----LLEFLKEHASGSKRLITEAL 650
Query: 592 ----CKIGEIDEAM--MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA-EKVIGVLNEMM 644
CK+ + A+ C+ G MY T++H C +N+ + V +++
Sbjct: 651 IVLHCKVNNLSAALDEYFADPCVHGWCFGS-STMYE-TLLHCCVANEHYAEASQVFSDLR 708
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKK- 703
GC VC +++ CK G E A +V N E K + + +Y + + + K+K
Sbjct: 709 LSGCEASESVCKSMVVVYCKLGFPETAHQVV-NQAETKGFHFACSPMYTDIIEAYGKQKL 767
Query: 704 --TADLVMSGLKFFGLESKLKS 723
A+ V+ L+ G LK+
Sbjct: 768 WQKAESVVGNLRQSGRTPDLKT 789
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 192/457 (42%), Gaps = 48/457 (10%)
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
R V+E + + P + I+ L R LA+ ++ + D +V + +
Sbjct: 173 RALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQV-YNAM 231
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRV--WEEMKKD 332
+ ++G+ + E++ MR++ C PD+ ++ L+ + G L L V + ++
Sbjct: 232 MGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS 291
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ PD + Y T+++ S ++ +F++M++
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR------------------------ 327
Query: 393 FDLLKDLVSSGYRADLGIYNNLIE--GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
+ DL YN +I G C L +A +LF +G PD ++ LL
Sbjct: 328 -----------CQPDLWTYNAMISVYGRCGLAA--EAERLFMELELKGFFPDAVTYNSLL 374
Query: 451 VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYV 509
+A + E ++ QQM+K+GF + K+G + +AL+++ +K
Sbjct: 375 YAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGR 434
Query: 510 SVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACE 567
+ D Y +L+DSL K +A +L E+ +KP +YS I + G+ ++A +
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 568 CHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
+ ++ P AY + L + E +A L RD + + + P +Y L ++
Sbjct: 495 TFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT-PSYTLYELMILGL 553
Query: 628 CKSNDAEKVIGVLNEMMQQ-GCPPGNVVCSAVISGMC 663
K N ++ + + +M + G P + S ++ G C
Sbjct: 554 MKENRSDDIQKTIRDMEELCGMNPLE-ISSVLVKGEC 589
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 128/688 (18%), Positives = 245/688 (35%), Gaps = 116/688 (16%)
Query: 117 VVTELSKLRRV--TPSLVAEVLKVQTNPTLSFKF-----FHWAEKQKGYHHNFA------ 163
++ L K R +L++E+L V PTL + A K++ F+
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 164 ------SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY 217
+Y+ + R N R A L M S G PS +E++I R +
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
M G+ P I L++ DLA +G + E T + ++
Sbjct: 564 KTIRDMEELCGMNPL-----EISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGS 618
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNL---------DGCLRVW-- 326
+GR E E+L ++E L+ + NL D C+ W
Sbjct: 619 YSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCF 678
Query: 327 --------------------------EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
+++ E +++ G E + +
Sbjct: 679 GSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQV 738
Query: 361 FKEMKSKG-HLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+ ++KG H +Y ++E++ ++ +L SG DL +N+L+
Sbjct: 739 VNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYA 798
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV--- 476
+E+A +F +++G P S+ LL R+E Y ++++++ +GF +
Sbjct: 799 QCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKS 858
Query: 477 -----IDDLARFFSIFVEKKGPIMALEVFSYLKEKGY----------------------- 508
+D AR +IF KK ++S +K GY
Sbjct: 859 SILLMLDAFARAGNIFEVKK-------IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 509 -------------VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
V + I+N ++ + + KK + ++ I L+PD +Y+ I+
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 556 HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
+ ++ ++ + P + YK L K +++A L + L
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 616 MEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
F +++ I +D+ K +L M G P ++ G +EA KV
Sbjct: 1032 RSFYHTMMKISRDSGSDS-KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVL 1090
Query: 676 SNLRERKLLTESDTIVYDEFLIDHMKKK 703
SNL++ ++ E T+ Y + +++ K
Sbjct: 1091 SNLKDTEV--ELTTLPYSSVIDAYLRSK 1116
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/383 (19%), Positives = 159/383 (41%), Gaps = 8/383 (2%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G P + +N +M A + G + A ++++ DG + +L+ LC GR++E+
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEEL 841
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
V+ +++ + + +++ GN+ +++ MK P + Y +I
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G RV + ++ EM+ ++ AI+ S+++ + A+ + + + +G D
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
YN LI C + E+ + L Q GL+P + K L+ + + K +E +L +
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 468 QMEKLGFPVIDDLAR-FFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVG 525
++ G + I + A ++ +K G ++ ++LM S G
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM---SCIPSIA 582
++A + + ++ + YS I ++ + E +++EM P
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE---RLLEMKKEGLEPDHR 1138
Query: 583 AYKCLTKGLCKIGEIDEAMMLVR 605
+ C + E E M+L++
Sbjct: 1139 IWTCFVRAASFSKEKIEVMLLLK 1161
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 127/676 (18%), Positives = 258/676 (38%), Gaps = 120/676 (17%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ +YNA R A++L ++ +G P + L+ + +V VY
Sbjct: 331 DLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVY 390
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE-DGLDEERVTFMVLVKGLC 279
++M+ K G YN I+ + G LDLAL +Y D K G + + +T+ VL+ L
Sbjct: 391 QQMQ-KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVM 339
+A R E ++ M + +P + Y+ L+ G + + M + +PD +
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV---------- 389
AY+ ++ L G + + L+++M S GH +Y ++ + N+
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 390 -----------------GAGFDL----LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAH 428
G FDL LK +++GY + +++ + + +A
Sbjct: 570 EELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAF 629
Query: 429 KLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM----------------------------- 459
+L + + L + L+VL+ + +
Sbjct: 630 ELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLH 689
Query: 460 -----ENFYKLLQQMEKL---GFPVIDDLARFFSIFVEKKG-PIMALEVFSYLKEKGY-- 508
E++ + Q L G + + + + K G P A +V + + KG+
Sbjct: 690 CCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 749
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
+Y ++++ K +KA S+ + + PD +++ + + G ++A
Sbjct: 750 ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAI 809
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE------------------AMMLVRDCL-- 608
N ++ P++ + L LC G ++E +++L+ D
Sbjct: 810 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 869
Query: 609 -GNV-----------TSG--PMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
GN+ +G P +Y + + CK +++EM + V
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK----V 925
Query: 655 CSAVISGMCK-YGTIEEARK---VFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD---L 707
A+ + M K Y IE+ +K V+ ++E L E D Y+ +I + + + + L
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL--EPDETTYNTLIIMYCRDRRPEEGYL 983
Query: 708 VMSGLKFFGLESKLKS 723
+M ++ GL+ KL +
Sbjct: 984 LMQQMRNLGLDPKLDT 999
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 1/229 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
++ + A +N+ ++ Q+ + + G P E + LI M+ R
Sbjct: 919 EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRP 978
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
Y + ++MRN G+ P++ Y ++ A + L+ A ++++ GL +R +
Sbjct: 979 EEGYLLMQQMRN-LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++K +G + ++L M+ P + +L+ GN +V +K
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTE 1097
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
VE + Y+++I G EMK +G D I+ V +
Sbjct: 1098 VELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 199/470 (42%), Gaps = 21/470 (4%)
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E + + G P+ L+ A R + V E M + G+ P Y +++ L +
Sbjct: 95 ESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCK 153
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
G++ A+ + + ++ G VT+ LV+GLC G +++ L+ + R+ +K P+ F
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y+ L+ + D +++ +E+ EP++++Y ++TG GR ++ LF+E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
+KG + Y L+ + LL ++ + YN LI L + E
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 426 KAHKLFQVTIQEG---LEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-------EKLGFP 475
+A ++ + + +G S P++ + +++ K L +M + +
Sbjct: 334 QALQVLK-EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFD 535
I L S E I +L ++ + D Y ++ SL + G A L
Sbjct: 393 AIGSLCEHNSKVQEAFYIIQSLS-----NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLY 447
Query: 536 EINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS--CIPSIAAYKCLTKGLCK 593
E+ PD+ +YS I G A E + I+E S C P++ + + GLCK
Sbjct: 448 EMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLS-IMEESENCKPTVDNFNAMILGLCK 506
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEM 643
I D AM V + + P E Y++ V ++ E VL+E+
Sbjct: 507 IRRTDLAME-VFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 165/394 (41%), Gaps = 19/394 (4%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
+P+V T L+ L L +RV E M + PD AY ++ L G V
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L ++M+ G+ + Y +LV + + ++ L+ G + Y+ L+E
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP--VI 477
++A KL I +G EP+ +S LL + + R ++ L +++ GF V+
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKG----YVSVDIYNILMDSLHKVGEMKKALSL 533
+ + + E S L E SV YNIL++SL G ++AL +
Sbjct: 283 SYNILLRCLCCDGRWE----EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 534 FDEINGAN----LKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
E++ N + S++ IA LC G++ +C +++I C P+ Y +
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKE--GKVDLVVKCLDEMIYRRCKPNEGTYNAI-G 395
Query: 590 GLCK-IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGC 648
LC+ ++ EA +++ L N Y + C+ + +L EM + G
Sbjct: 396 SLCEHNSKVQEAFYIIQS-LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 454
Query: 649 PPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
P SA+I G+C G A +V S + E +
Sbjct: 455 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE 488
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 174/424 (41%), Gaps = 12/424 (2%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ LC+A R+ + + V+ M PD AYT LV L +GN+ +++ E+M+
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ + Y ++ GL G + + + + KG + Y L+E+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
LL +++ G +L YN L+ G C + + A LF+ +G + + +S LL
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 454 AEAKRMENFYKLLQQME----KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
R E LL +M+ + L + + + L+ S + V
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY-SIAILCHVDLGEIKQACEC 568
+ YN ++ L K G++ + DE+ KP+ +Y +I LC + ++++A
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHN-SKVQEAFYI 410
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ + YK + LC+ G A L+ + + P YS + C
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYE-MTRCGFDPDAHTYSALIRGLC 469
Query: 629 KS---NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
A +V+ ++ E + C P +A+I G+CK + A +VF + E+K +
Sbjct: 470 LEGMFTGAMEVLSIMEE--SENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMP 527
Query: 686 ESDT 689
T
Sbjct: 528 NETT 531
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 144/333 (43%), Gaps = 48/333 (14%)
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
F L+ LV+ G++ ++ L+ LC N+ +KA ++ ++ + G+ PD + L+
Sbjct: 91 FSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQ 150
Query: 453 YAEAKRMENFYKLLQQMEKLGFP--------VIDDLARFFSI-----FVEK---KGPIMA 496
+ + +L+++ME G+P ++ L S+ FVE+ KG
Sbjct: 151 LCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Query: 497 LEVFSYLKEKGY---------------------VSVDIYNILMDSLHKVGEMKKALSLFD 535
+S+L E Y ++ YN+L+ K G A++LF
Sbjct: 211 AFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFR 270
Query: 536 EINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
E+ K + SY+I + C G ++A ++ PS+ Y L L G
Sbjct: 271 ELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHG 330
Query: 596 EIDEAMMLVRDCLGNVTSGPMEF-----MYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
++A+ ++++ ++ G +F Y+ + CK + V+ L+EM+ + C P
Sbjct: 331 RTEQALQVLKE----MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 651 GNVVCSAVISGMCKYGT-IEEARKVFSNLRERK 682
+A I +C++ + ++EA + +L ++
Sbjct: 387 NEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQ 418
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 16/285 (5%)
Query: 156 KGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR---MHSDAGR 212
KG+ N SYN C+ + A+ L MD + PS + ILI H +
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
L+V K ++F V YN ++ L + G +DL + D+ T+
Sbjct: 335 ALQVLKEMSKGNHQFRVTATS--YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 273 VLVKGLCQ-AGRIDEMLEVLGRM--REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
+ LC+ ++ E ++ + ++K C D Y ++ L +GN ++ EM
Sbjct: 393 A-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEM 449
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVE---EGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
+ +PD Y+ +I GL G E + +E ++ +D + +++ +
Sbjct: 450 TRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN--FNAMILGLCKI 507
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
+ ++ + +V + Y L+EG+ + ++ E A ++
Sbjct: 508 RRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVL 552
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/523 (19%), Positives = 220/523 (42%), Gaps = 21/523 (4%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N +++A +R N R +L LM G P + F +++ ++ G + V
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG-DVEAGKVI 203
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+ K G+ + + N I+ + G LD A + +E + + + ++ CQ
Sbjct: 204 HSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE----RDVIAWNSVLLAYCQ 259
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G+ +E +E++ M ++ P + + +L+ G D + + ++M+ + DV
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+ +I+GL + G + +F++M G + + S V + + + G ++ V
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G+ D+ + N+L++ K E A K+F + D + ++ Y +A
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCG 435
Query: 461 NFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV--SVDIYNIL 517
Y+L +M+ P I S +++ A+++F +++ G V + +N++
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+ + G+ +AL LF ++ + P+S + + +L K E H ++ +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEF--MYSLTVIHACKSNDAEK 635
A LT K G+I+ + + LG T + + + V+H
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIF---LGMETKDIITWNSLIGGYVLHGSYG----P 608
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
+ + N+M QG P S++I G ++E +KVF ++
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 113/563 (20%), Positives = 239/563 (42%), Gaps = 69/563 (12%)
Query: 174 RNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV--KP 231
RN A++ + + QG + L+ D+G H+ + +FG+ +P
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGS----IHLGRILHARFGLFTEP 113
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
VF+ +++ + G + A V+D +E L T+ ++ + R E+ ++
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSRENRWREVAKLF 169
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDG---------------CLRVWEEM------- 329
M + PD F + +++ G+++ CLRV +
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 330 ----------KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSL 379
++ R E DV+A+ +++ G+ EE L KEM+ +G + L
Sbjct: 230 GELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 380 VESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
+ + + K A DL++ + + G AD+ + +I GL + +A +F+ G+
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 440 EPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI--FVEKKGPIM-A 496
P+ +++ + + K + ++ K+GF IDD+ S+ K G + A
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF--IDDVLVGNSLVDMYSKCGKLEDA 406
Query: 497 LEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCH 556
+VF +K K V +N ++ + G KA LF + ANL+P+ +++ I +
Sbjct: 407 RKVFDSVKNK---DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 557 VDLGEIKQACECHNKIIEMSCIP-SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
+ G+ +A + ++ + + + A + + G + G+ DEA+ L R
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFR---------K 514
Query: 616 MEF-------MYSLTVIHACKSNDAEKVIGVLNE-MMQQGCPPGNVVCSAVISGMCKYGT 667
M+F + L+++ AC + K++ ++ ++++ + V +A+ K G
Sbjct: 515 MQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGD 574
Query: 668 IEEARKVFSNLRERKLLTESDTI 690
IE +R +F + + ++T + I
Sbjct: 575 IEYSRTIFLGMETKDIITWNSLI 597
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 197/473 (41%), Gaps = 27/473 (5%)
Query: 241 DALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK--- 297
D L R G L A D + G +R T++ L++ +G I LGR+
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH-----LGRILHARFG 108
Query: 298 -LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
PDVF T L+ + G + +V++ M+ E ++ ++ +I S R E
Sbjct: 109 LFTEPDVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWRE 164
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
LF+ M G L D ++ +++ V AG + ++ G + L + N+++
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-P 475
+ + A K F+ E D ++ +L+ Y + + E +L+++MEK G P
Sbjct: 225 VYAKCGELDFATKFFR----RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSL 533
+ + + A+++ ++ G ++ D+ + ++ L G +AL +
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFG-ITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 534 FDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCK 593
F ++ A + P++ + A+ L I Q E H+ ++M I + L K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 594 IGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNV 653
G++++A R +V + + + ++ + C++ K + M P +
Sbjct: 400 CGKLEDA----RKVFDSVKNKDV-YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 654 VCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKKTAD 706
+ +ISG K G EA +F + E+ + +T ++ + +++ D
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRM-EKDGKVQRNTATWNLIIAGYIQNGKKD 506
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
+I + AG + Y ++ +M++ ++P + +N ++ I+ G A+ ++ ++D
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDA-NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Query: 263 G-LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQ-GNLD 320
G + T+ +++ G Q G+ DE LE+ +M+ P+ +V + L+P NL
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN----SVTILSLLPACANLL 538
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSN----GGRVEEGYVLFKEMKSKGHLIDRAIY 376
G V E+ + ++ A + L++ G +E +F M++K D +
Sbjct: 539 GAKMV-REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITW 593
Query: 377 GSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-QVTI 435
SL+ +V G L + + G + G +++I + ++ K+F +
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
+ P ++ LY A R+E + +Q+M
Sbjct: 654 DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G H+ SY++ C ++ +L + M + P K + ++ + A
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVK 276
++ + M + G++P V YN ++ L + + A V+D+ E GL T+ ++
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 277 GLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
L + G +E+ E+L +MR+ C P V Y +L+R L + D L +W+EMK+ V P
Sbjct: 417 IL-RTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKG 368
D+ +Y +I GL G++EE Y +KEMK KG
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 191/439 (43%), Gaps = 72/439 (16%)
Query: 127 VTPS--LVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
V PS LV E+L +V+ + +F FF WA KQ+GY + Y++ + + R D
Sbjct: 123 VKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGK---MRKFDT 179
Query: 184 LPELMDSQGK-PPS---EKQFEILIRMHS---DAGRGLRVYHVYEKMRNKFGVKPRVFLY 236
L+D K PS + I+IR + D G+ + +H Y++ + + G+ +
Sbjct: 180 AWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDD----F 235
Query: 237 NRIMDALIR------TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
++ AL R GHL +D + +F +++ G C V
Sbjct: 236 QSLLSALCRYKNVSDAGHLIFC-------NKDKYPFDAKSFNIVLNGWCN---------V 279
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+G RE RVW EM V+ DV++Y+++I+ S
Sbjct: 280 IGSPRE-------------------------AERVWMEMGNVGVKHDVVSYSSMISCYSK 314
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS-GYRADLG 409
GG + + LF MK + DR +Y ++V + + V +L+K + G ++
Sbjct: 315 GGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVV 374
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
YN+LI+ LC K E+A ++F +++GL P + + + E ++LL +M
Sbjct: 375 TYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG---EEVFELLAKM 431
Query: 470 EKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGE 526
K+G P ++ + L ++ +KEK V D+ Y +++ L G+
Sbjct: 432 RKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT-VGPDLSSYIVMIHGLFLNGK 490
Query: 527 MKKALSLFDEINGANLKPD 545
+++A + E+ ++P+
Sbjct: 491 IEEAYGYYKEMKDKGMRPN 509
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 57/363 (15%)
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGA----- 391
V Y ++I+ L + + + L EM K L++ ++ + AV+ VG
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTF 220
Query: 392 ----------GFDLLKDLVSS-------------------GYRADLGIYNNLIEGLCN-L 421
G D + L+S+ Y D +N ++ G CN +
Sbjct: 221 HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK--------LG 473
+A +++ G++ D +S ++ Y++ + KL +M+K +
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 474 FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALS 532
V+ LA+ S E + + +E +EKG +V YN L+ L K + ++A
Sbjct: 341 NAVVHALAKA-SFVSEARNLMKTME-----EEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
+FDE+ L P +Y A + + GE + E K+ +M C P++ Y L + LC
Sbjct: 395 VFDEMLEKGLFPTIRTYH-AFMRILRTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLC 451
Query: 593 KIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN-DAEKVIGVLNEMMQQGCPPG 651
+ + D ++L D + T GP + + +IH N E+ G EM +G P
Sbjct: 452 RWRDFDNVLLLW-DEMKEKTVGP-DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Query: 652 NVV 654
V
Sbjct: 510 ENV 512
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 13/256 (5%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE------- 455
GY + Y+++I L + KF+ A L + P ++ + LL++ +
Sbjct: 156 GYVRSVREYHSMISILGKMRKFDTAWTL--IDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
K + F+ + ++G IDD S K A + K+K +N
Sbjct: 214 GKAINTFHAYKRFKLEMG---IDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270
Query: 516 ILMDSL-HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE 574
I+++ + +G ++A ++ E+ +K D SYS I C+ G + + + +++ +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
P Y + L K + EA L++ P Y+ + CK+ E
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 635 KVIGVLNEMMQQGCPP 650
+ V +EM+++G P
Sbjct: 391 EAKQVFDEMLEKGLFP 406
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/593 (19%), Positives = 234/593 (39%), Gaps = 70/593 (11%)
Query: 155 QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGL 214
+ G + ++N + + H A+ L + M+ +G P K + IL+ +H+DAG
Sbjct: 333 KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIE 392
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL--DEERVT-- 270
Y K+R K G+ P + ++ L + + +V + + + DE V
Sbjct: 393 AALEYYRKIR-KVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVI 451
Query: 271 --------FMVLVKGLCQAGRIDEMLE-----------------------VLGRMREKLC 299
+V K L + ++D +L G+
Sbjct: 452 MQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQ 511
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
R DV Y V+++ + L +++ MK PD Y ++ L+ V+E
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+ EM G Y +++ S+V + + DL + + +G + + +Y +LI G
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFPVID 478
E+A + F++ + G++ + + + L+ Y++ +E ++ +M + G P +
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 479 DLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEIN 538
S+ + A +F+ L+EKG V + +M +G + +A+ + +E+
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMR 751
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACEC-HNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
+ L D S++ + C+ G++ + CE H ++E + +K L L K G
Sbjct: 752 ESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVP 811
Query: 598 DEAMMLVR-----------------------------DCLGNVTSG--PME-FMYSLTVI 625
EA+ ++ + +TSG P E F Y+ +
Sbjct: 812 SEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIY 871
Query: 626 HACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
S D + + M ++G P V + ++ K G +E ++V S L
Sbjct: 872 TYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/450 (18%), Positives = 187/450 (41%), Gaps = 23/450 (5%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
F+ G ++ YN + H A L + M +QG P E + L +M +
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
+ +M + G KP Y ++ + +R G L A+ +Y+ ++ G+
Sbjct: 562 GVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNE 620
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V + L+ G ++G ++E ++ M E + + T L++ G L+ RV+++
Sbjct: 621 VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
MK PDV A ++++ ++ G V E +F ++ KG D + +++ + +
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGM 739
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVK 447
+ ++ +++ SG +D +N ++ + + +LF ++ ++ L D+ + K
Sbjct: 740 LDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFK 799
Query: 448 PLLVLYAE----AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL 503
L L + ++ + + + L P I A FS M L ++
Sbjct: 800 TLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAIT--ATLFS--------AMGLYAYALE 849
Query: 504 KEKGYVSVDI------YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHV 557
+ S +I YN ++ + G++ AL + + L+PD + + + +
Sbjct: 850 SCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYG 909
Query: 558 DLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
G ++ H+++ PS + +K +
Sbjct: 910 KAGMVEGVKRVHSRLTFGELEPSQSLFKAV 939
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 199/474 (41%), Gaps = 33/474 (6%)
Query: 230 KPRVF-LYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
KPR+ +N ++D + G L+ A +++ + + G+ + VTF ++ G + E
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
+L +M EK PD Y +L+ + G+++ L + +++K + PD + + ++ L
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG------FDLLKDLVSS 402
V E + EM ID +++ +V V F L L S+
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
A + +Y +GL E + G D L ++ Y +AK E
Sbjct: 481 TLAAVIDVYAE--KGLW----VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA 534
Query: 463 YKLLQQMEKLG-FPVIDDLARFFSIFVEKKGPIM---ALEVFSYLKEKG-YVSVDIYNIL 517
L + M+ G +P D + S+F G + A + + + + G Y +
Sbjct: 535 LSLFKGMKNQGTWP---DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+ S ++G + A+ L++ + +KP+ Y I + G +++A + + E
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS----NDA 633
+ L K K+G ++EA V D + + GP + S +++ C ++A
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARR-VYDKMKDSEGGP-DVAASNSMLSLCADLGIVSEA 709
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCK-YGTIEEARKVFSNLRERKLLTE 686
E + L E + C +V+ A + + K G ++EA +V +RE LL++
Sbjct: 710 ESIFNALRE--KGTC---DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 147/401 (36%), Gaps = 59/401 (14%)
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
P+V Y +++R L G D W EM + V P Y ++ G V+E +
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY-----NNLI 415
K M + H D ++V F + K + DL N
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSA 262
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLE--------PDFLSVKP--------LLVLYAEAKRM 459
+ NL +F + +LF+V + +E D KP L+ LY +A R+
Sbjct: 263 QSPVNLKQF-LSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 460 ENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMD 519
+ L +M K G P ID + +N ++
Sbjct: 322 NDAANLFSEMLKSGVP-IDTVT--------------------------------FNTMIH 348
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ G + +A SL ++ + PD+ +Y+I + H D G+I+ A E + KI ++ P
Sbjct: 349 TCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFP 408
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG- 638
++ + LC+ + E ++ + N +S+ VI N+ V
Sbjct: 409 DTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRID---EHSVPVIMQMYVNEGLVVQAK 465
Query: 639 VLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
L E Q C + +AVI + G EA VF R
Sbjct: 466 ALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKR 506
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 166/393 (42%), Gaps = 53/393 (13%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN DAL + G ++ A + + K+ G+ + + + L+ G C G++ + L+++ M
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
PD+ Y VLV L G+ + L ++E MK + +P+ + + II GL +V+
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 356 EGYVLFKEMKSKG----------------------------HLIDRAIYGSLVESFVAVN 387
E F ++ K + + +++Y L S
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 388 KVGAGFDLLKDLVSSGYRADLG--IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
+ D+LK + S YR + G + +I C LN +A LF ++ GL PD +
Sbjct: 571 YLEKAHDVLKKM--SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 446 VKPLLVLYAEAKRMENFYKLLQQMEKLG-------FPVIDDLARFFSIFVE--------- 489
++ Y ++ L + M++ G + V+ D R+ + E
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD--RYLKLDPEHHETCSVQG 686
Query: 490 KKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
+ G A EV G + +D+ Y +L+D K+ +++A LFD + + L+PD
Sbjct: 687 EVGKRKASEVLREFSAAG-IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
+Y+ I + G I A ++ + IPS
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 206/479 (43%), Gaps = 65/479 (13%)
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+KM K G+K + + I+ + AL + +F++ + +RV + V L +
Sbjct: 342 DKMLGK-GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
GR++E E+L M+++ PDV YT L+ QG + L + +EM + + PD++
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y +++GL+ G EE +++ MK++G + A+ S++
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPN-AVTNSVI-------------------- 499
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
IEGLC K ++A F Q+ E VK Y EA +
Sbjct: 500 --------------IEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG----YCEAGLSK 541
Query: 461 NFYKLLQQMEKLGFPVIDD--LARFFSIFVE---KKGPIMALEVFSYLKEKGYVSVDIYN 515
YK ++E +P+ + FFS+ +E +K + ++ +Y E G +
Sbjct: 542 KAYKAFVRLE---YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGR---SMCG 595
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
++ + K+ +++A LFD + L PD F+Y+I I + L E+++A + +
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 576 SCIPSIAAYKCLTKGLCKI-----------GEID--EAMMLVRDCLGNVTSGPMEFMYSL 622
P + Y L K+ GE+ +A ++R+ G Y++
Sbjct: 656 GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLRE-FSAAGIGLDVVCYTV 714
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
+ CK N+ E+ + + M+ G P V + +IS + G I+ A + + L ++
Sbjct: 715 LIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 215/533 (40%), Gaps = 70/533 (13%)
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
+L+ + + RG V + E + + K R F+ R+ AL++ ++L ++D+ +
Sbjct: 111 VLVELIKNEERGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAY---VSLGMFDEATD 167
Query: 262 DGLDEERVTFMVLVKG-------LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+R+ +V +K + + G+I ++ + ++++ + + Y ++V+ L
Sbjct: 168 VLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALC 227
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID-- 372
+GNL+ + E V Y T I GL G E+ L E+ + +L
Sbjct: 228 RKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDD 281
Query: 373 -RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
RA+ G +V F K+ A ++ ++ G+ D+ +I+ C +A
Sbjct: 282 LRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFL 341
Query: 432 QVTIQEGLEPDFLSVKPLLVLYAEA----KRMENFYKLLQQME--------KLGFPVIDD 479
+ +GL+ + + V +L Y + + +E F K + M + F +
Sbjct: 342 DKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF-KEFRDMNIFLDRVCYNVAFDALSK 400
Query: 480 LARFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEIN 538
L R VE+ A E+ +K++G V V Y L+D G++ AL L DE+
Sbjct: 401 LGR-----VEE-----AFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
G + PD +Y++ + G ++ E + ++ P+ + +GLC ++
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 599 EA----MMLVRDCLGNVTS---GPMEFMYSLTVIHA--------------------CKSN 631
EA L + C N S G E S A C
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 632 DAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
EK VL +M PG +C +I CK + EA+ +F + ER L+
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI 623
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 182/453 (40%), Gaps = 63/453 (13%)
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQG---NLDGCL-----------------RVWE 327
L L +++E P+V AY LVRIL G LD L V
Sbjct: 74 LSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIG 133
Query: 328 EMKKDRVEPDVM--AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA 385
E +++ V+ ++ + G +E + + K ++D L+
Sbjct: 134 EQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTE 193
Query: 386 VNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-------------- 431
K+G L K L G A+ Y +++ LC E+A L
Sbjct: 194 FGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFIN 253
Query: 432 -----------QVTIQEGLEPDFLSVKPLLVL-------YAEAKRMENFYKLLQQMEKLG 473
I E ++ +L+ L + + +M+ ++ +ME++G
Sbjct: 254 GLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIG 313
Query: 474 FPVIDDLARFFSIFVEKKGPIMAL-EVFSYLKE---KGY-VSVDIYNILMDSLHKVGEMK 528
F + D+ ++ +++ M L E +L + KG V+ I ++++ K+
Sbjct: 314 FGL--DVYACLAV-IDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCL 370
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
+AL F E N+ D Y++A LG +++A E ++ + +P + Y L
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 589 KGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGC 648
G C G++ +A+ L+ + +GN S P Y++ V ++ E+V+ + M +G
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMS-PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP 489
Query: 649 PPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
P V S +I G+C ++EA FS+L ++
Sbjct: 490 KPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 138/348 (39%), Gaps = 61/348 (17%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI------------ 204
G + +YN + RN H ++ E M ++G P+ ++I
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 205 -------------------RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
+ + +AG + Y + +R ++ ++ V++ ++ +L
Sbjct: 513 EDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF--VRLEYPLRKSVYI--KLFFSLCI 568
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
G+L+ A V ++ R ++ C+ + E + M E+ PD+F
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
YT+++ L ++E+MK+ ++PDV+ Y ++ + ++
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR-------------YLKLD 675
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVG--AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
+ H E+ +VG ++L++ ++G D+ Y LI+ C +N
Sbjct: 676 PEHH-----------ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNN 724
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
E+A +LF I GLEPD ++ L+ Y ++ L+ ++ K
Sbjct: 725 LEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 9/326 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGK---PPSEKQFEILIRMHSDA 210
K+ G + ++YN + +L +LM +G P+ + F +L++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDD---FKEDGLDEE 267
+ + V +KM + GV+P YN I ++ G A S + KE
Sbjct: 202 KKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWE 327
R T ++V G C+ GR+ + L + RM+E ++ + L+ V + DG V
Sbjct: 261 R-TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLT 319
Query: 328 EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVN 387
MK+ V+ DV+ Y+T++ S+ G +E+ +FKEM G D Y L + +V
Sbjct: 320 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 388 KVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
+ +LL+ L+ R ++ I+ +I G C+ + A ++F + G+ P+ + +
Sbjct: 380 EPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLG 473
L+ Y E K+ ++LQ M G
Sbjct: 439 TLMWGYLEVKQPWKAEEVLQMMRGCG 464
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 170/377 (45%), Gaps = 18/377 (4%)
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
++M+ LI G A +V+ E G +++ L+ + + + ++ + +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
+ D + ++ GN++ ++ +MK+ + P Y T+I G G+ E
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 357 GYVLFKEMKSKGHL---IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
L M +G++ + + LV+++ KV ++++K + G R D YN
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 414 LIEGLCNLNKFEKAHKLFQV----TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
+ C + K E +V ++E +P+ + ++ Y R+ + + +++M
Sbjct: 229 I--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 470 EKLGFPVIDDLARFFSI---FVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKV 524
+++ V +L F S+ FVE EV + +KE V D+ Y+ +M++
Sbjct: 287 KEM--RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECN-VKADVITYSTVMNAWSSA 343
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
G M+KA +F E+ A +KPD+ +YSI +V E K+A E +I + P++ +
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIF 402
Query: 585 KCLTKGLCKIGEIDEAM 601
+ G C G +D+AM
Sbjct: 403 TTVISGWCSNGSMDDAM 419
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 155/347 (44%), Gaps = 17/347 (4%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G K +N +++A +G+++ A+ KE GL+ T+ L+KG AG+ +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 288 LEVLGRMREKL---CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
E+L M E+ P++ + VLV+ + ++ V ++M++ V PD + Y TI
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 345 ITGLSNGG---RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
T G R E V MK K R G +V + +V G ++ +
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC-GIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
A+L ++N+LI G + + ++ + + ++ D ++ ++ ++ A ME
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 348
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSI----FVEKKGPIMALEVFSYLKEKGYVSVDIYNIL 517
++ ++M K G + A +SI +V K P A E+ L + +V I+ +
Sbjct: 349 AAQVFKEMVKAG---VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTV 405
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
+ G M A+ +F+++ + P+ ++ + ++ E+KQ
Sbjct: 406 ISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYL---EVKQ 449
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 147/372 (39%), Gaps = 50/372 (13%)
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
GR E +FK + GH Y +L+ + + G+ ++ ++ SG + D +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
N +I E A + + GL P + L+ Y A + E +LL M +
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 472 LGFPVIDDLARFFSIFVE----KKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGE 526
G + R F++ V+ KK A EV ++E G + YN + + GE
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 527 MKKALSLFDE--INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
+A S E + KP+ + I + + G ++ ++ EM ++ +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 585 KCLTKGLCKIGE---IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND-AEKVIGVL 640
L G ++ + IDE + L+++C NV + + + TV++A S EK V
Sbjct: 299 NSLINGFVEVMDRDGIDEVLTLMKEC--NVKADVITYS---TVMNAWSSAGYMEKAAQVF 353
Query: 641 NEMMQQGCPPGN----------------------------------VVCSAVISGMCKYG 666
EM++ G P V+ + VISG C G
Sbjct: 354 KEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNG 413
Query: 667 TIEEARKVFSNL 678
++++A +VF+ +
Sbjct: 414 SMDDAMRVFNKM 425
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 147/327 (44%), Gaps = 5/327 (1%)
Query: 136 LKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPP 195
LK +P + FH + + G+ H++ SY++ Y + ++ + A DQ+ L+ +
Sbjct: 56 LKEIEDPEEALSLFHQYQ-EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC 114
Query: 196 SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSV 255
E F LI+ + AG + V+ K+ F + N +++ L+ G L+ A S
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKI-TSFDCVRTIQSLNTLINVLVDNGELEKAKSF 173
Query: 256 YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVP 315
+D K+ L V+F +L+KG + +V M E +P V Y L+ L
Sbjct: 174 FDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR 233
Query: 316 QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI 375
++ + E+M K R+ P+ + + ++ GL G E L +M+ +G
Sbjct: 234 NDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
YG L+ ++ LL ++ + D+ IYN L+ LC + +A+++
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENF 462
+G +P+ + + ++ + R+E+F
Sbjct: 354 MKGCKPNAATYRMMIDGFC---RIEDF 377
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P+ F ILI+ D V+++M + V+P V YN ++ L R + A S
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEML-EMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ +D + + VTF +L+KGLC G +E +++ M + C+P + Y +L+ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
+G +D + EMKK R++PDV+ Y ++ L RV E Y + EM+ KG + A
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
Y +++ F + +G ++L +++S + + ++ GL + A + +V
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 435 IQEGL 439
++ L
Sbjct: 423 GKKNL 427
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF 484
E+A LF + G D+ S L+ A+++ + ++L+ + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 485 SIFVEKKGPI-MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
K G + A++VF + V ++ N L++ L GE++KA S FD L
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMM 602
+P+S S++I I +D + + AC+ ++++EM PS+ Y L LC+ ++ +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 603 LVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
L+ D + P + L + C + + ++ +M +GC PG V ++S +
Sbjct: 243 LLEDMIKKRIR-PNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 663 CKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM 700
K G I+EA+ + +++R++ + D ++Y+ L++H+
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRI--KPDVVIYN-ILVNHL 336
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 165/412 (40%), Gaps = 37/412 (8%)
Query: 193 KPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
KP E F ++ D L ++H Y++M G + Y+ ++ L ++ + D
Sbjct: 45 KPWEEVPFLTDLKEIEDPEEALSLFHQYQEM----GFRHDYPSYSSLIYKLAKSRNFDAV 100
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRI 312
+ + + FM L++ +AG +D+ ++V ++ C + + L+ +
Sbjct: 101 DQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINV 160
Query: 313 LVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID 372
LV G L+ ++ K R+ P+ +++ +I G + E +F EM
Sbjct: 161 LVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPS 220
Query: 373 RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
Y SL+ + +G LL+D++ R + + L++GLC ++ +A KL
Sbjct: 221 VVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMF 280
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG 492
G +P ++ L+ + R++ LL +M+K +
Sbjct: 281 DMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK-----------------RRIK 323
Query: 493 PIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
P V IYNIL++ L + +A + E+ KP++ +Y +
Sbjct: 324 P----------------DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMM 367
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
I + + N ++ P+ A + C+ GL K G +D A ++
Sbjct: 368 IDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 131/328 (39%), Gaps = 7/328 (2%)
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
EE LF + + G D Y SL+ A +L+ + R ++ L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL---LVLYAEAKRMENFYKLLQQMEK 471
I+ +KA +F S+ L LV E ++ ++F+ + M
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 472 LGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE-KGYVSVDIYNILMDSLHKVGEMKKA 530
V ++ F++K A +VF + E + SV YN L+ L + +M KA
Sbjct: 183 RPNSVSFNI--LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
SL +++ ++P++ ++ + + GE +A + + C P + Y L
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 591 LCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
L K G IDEA +L+ + + P +Y++ V H C + VL EM +GC P
Sbjct: 301 LGKRGRIDEAKLLLGE-MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 651 GNVVCSAVISGMCKYGTIEEARKVFSNL 678
+I G C+ + V + +
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAM 387
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 1/349 (0%)
Query: 127 VTPSLVAEVLKVQTNPTL-SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
VT V VL+ + + S +FF+WA Y Y A + + + + ++
Sbjct: 75 VTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKIL 134
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
+ M S + +I + G + ++ + G + V +YN ++ AL
Sbjct: 135 KQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD 194
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A ++ GL ++ T+ +LV G C AG++ E E L M + P
Sbjct: 195 VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARG 254
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+L+ L+ G L+ + +M K PD+ + +I +S G VE ++
Sbjct: 255 RDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC 314
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
G +D Y +L+ + + K+ F LL + V G++ +Y +I+G+C F+
Sbjct: 315 KLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD 374
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
A F + P+ L+ + + + L +M ++G
Sbjct: 375 DAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 151/345 (43%), Gaps = 10/345 (2%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P M Y + L++ + E + + K+MK I ++E + V +L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 396 LKDLVSS-GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+ + G + + +YN+L+ LC++ F A+ L + I++GL+PD + L+ +
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE---KKGPI-MALEVFSYLKEKGYV- 509
A +M+ + L +M + GF + AR + +E G + A E+ S + + G+V
Sbjct: 229 SAGKMKEAQEFLDEMSRRGF---NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVP 285
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+ +NIL++++ K GE++ + ++ L D +Y I +G+I +A
Sbjct: 286 DIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLL 345
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
N +E P + Y + KG+C+ G D+A D + P +Y++ + +
Sbjct: 346 NNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSD-MKVKAHPPNRPVYTMLITMCGR 404
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKV 674
L EM + G P + V G+ G + A ++
Sbjct: 405 GGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 132/333 (39%), Gaps = 3/333 (0%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD- 332
L K L + + M ++L +M++ ++ G++D + ++ + K
Sbjct: 117 LAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTL 176
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ V Y +++ L + Y L + M KG D+ Y LV + + K+
Sbjct: 177 GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEA 236
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
+ L ++ G+ + LIEGL N E A ++ + G PD + L+
Sbjct: 237 QEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEA 296
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSV 511
+++ +E ++ KLG V D + V K G I A + + E G+
Sbjct: 297 ISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPF 356
Query: 512 -DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
+Y ++ + + G A S F ++ P+ Y++ I G+ A
Sbjct: 357 PSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLV 416
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMML 603
++ EM +P + +T GL G+ D AM +
Sbjct: 417 EMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 1/174 (0%)
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRI 239
+A ++ M G P + F ILI S +G +Y K G+ + Y +
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTA-CKLGLCVDIDTYKTL 328
Query: 240 MDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+ A+ + G +D A + ++ EDG + ++KG+C+ G D+ M+ K
Sbjct: 329 IPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAH 388
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
P+ YT+L+ + G EM + + P + + GL NGG+
Sbjct: 389 PPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 149/356 (41%), Gaps = 16/356 (4%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMH- 207
F W +KQ+ Y + Y+ M + R A L M + G P + LI H
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 208 --SDAGRGL-RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
D + L +V +KM+ +P V YN ++ A ++G +D +++ D +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ TF ++ + G I EM VL RMR C+PD+ + VL+ + + +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++ + + + +P + + ++I +++ +FK+M ++ Y ++ +
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
V ++ +++ S N ++E C + +A KLF + PD
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
+ K L Y +A E L+++MEK G I RFF + ALEVF
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDG---IVPNKRFF---------LEALEVF 463
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
Query: 494 IMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
+ LEVF +++++ + D +Y+ L+ + K G+ + A+ LF E+ + +PD+ Y+
Sbjct: 114 LQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNA 173
Query: 552 AILCHVDLGEIKQACECHNKIIEM-----SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
I H+ + +A E ++ C P++ Y L + + G++D+ L +D
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD 233
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
L P + ++ + K+ +++ VL M C P + + +I K
Sbjct: 234 -LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQ 292
Query: 667 TIEEARKVFSNLRERKLLTESDTI-VYDEFLIDHMKKKTAD 706
E+ + F +L K E T+ ++ +I++ K + D
Sbjct: 293 EFEKMEQTFKSLMRSK---EKPTLPTFNSMIINYGKARMID 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 16/253 (6%)
Query: 360 LFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+F+ M K + ++ D +Y L+ + L ++ +SG R D +YN LI
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA- 177
Query: 419 CNLNKFEKAHKLFQV----TIQEGLE---PDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
+L+ +KA L +V +G+E P+ ++ LL +A++ +++ L + ++
Sbjct: 178 -HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 472 LGFPVIDDLARFFSIF--VEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEM 527
PV D+ F + K G I +E DI +N+L+DS K E
Sbjct: 237 S--PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 528 KKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
+K F + + KP +++ I+ + I +A K+ +M+ IPS Y+C+
Sbjct: 295 EKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM 354
Query: 588 TKGLCKIGEIDEA 600
G + A
Sbjct: 355 IMMYGYCGSVSRA 367
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 149/356 (41%), Gaps = 16/356 (4%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMH- 207
F W +KQ+ Y + Y+ M + R A L M + G P + LI H
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHL 179
Query: 208 --SDAGRGL-RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
D + L +V +KM+ +P V YN ++ A ++G +D +++ D +
Sbjct: 180 HTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ TF ++ + G I EM VL RMR C+PD+ + VL+ + + +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++ + + + +P + + ++I +++ +FK+M ++ Y ++ +
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
V ++ +++ S N ++E C + +A KLF + PD
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF 500
+ K L Y +A E L+++MEK G I RFF + ALEVF
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDG---IVPNKRFF---------LEALEVF 463
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
Query: 494 IMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
+ LEVF +++++ + D +Y+ L+ + K G+ + A+ LF E+ + +PD+ Y+
Sbjct: 114 LQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNA 173
Query: 552 AILCHVDLGEIKQACECHNKIIEM-----SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
I H+ + +A E ++ C P++ Y L + + G++D+ L +D
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKD 233
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
L P + ++ + K+ +++ VL M C P + + +I K
Sbjct: 234 -LDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQ 292
Query: 667 TIEEARKVFSNLRERKLLTESDTI-VYDEFLIDHMKKKTAD 706
E+ + F +L K E T+ ++ +I++ K + D
Sbjct: 293 EFEKMEQTFKSLMRSK---EKPTLPTFNSMIINYGKARMID 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 110/253 (43%), Gaps = 16/253 (6%)
Query: 360 LFKEM-KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+F+ M K + ++ D +Y L+ + L ++ +SG R D +YN LI
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA- 177
Query: 419 CNLNKFEKAHKLFQV----TIQEGLE---PDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
+L+ +KA L +V +G+E P+ ++ LL +A++ +++ L + ++
Sbjct: 178 -HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM 236
Query: 472 LGFPVIDDLARFFSIF--VEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEM 527
PV D+ F + K G I +E DI +N+L+DS K E
Sbjct: 237 S--PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEF 294
Query: 528 KKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
+K F + + KP +++ I+ + I +A K+ +M+ IPS Y+C+
Sbjct: 295 EKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM 354
Query: 588 TKGLCKIGEIDEA 600
G + A
Sbjct: 355 IMMYGYCGSVSRA 367
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 121/579 (20%), Positives = 231/579 (39%), Gaps = 18/579 (3%)
Query: 120 ELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNR-NNHH 178
E + + +T V L+ + FF W KQ Y H+ +++ + + +
Sbjct: 30 EYTAAKPLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREY 89
Query: 179 RAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNR 238
+ D++ E + G + F +L+ + + VY M + FG P N
Sbjct: 90 YSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGM-SSFGFVPNTRAMNM 148
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV---LGRMR 295
+MD + ++ AL +++ + +F + + C G +++ V L RM
Sbjct: 149 MMDVNFKLNVVNGALEIFEGIRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMI 204
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
+ P+ + ++R+ G + +V M + V ++ +++G G +
Sbjct: 205 GEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQ 264
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
+ LF +M G + Y SL++ FV + V F +L + S G D+ + N +I
Sbjct: 265 KAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMI 324
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
L +FE+A K+F + L PD + +L + + + ++ +
Sbjct: 325 HTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDL 384
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLF 534
V +L + F + AL+V S + K + + Y + + +L + G + A+ ++
Sbjct: 385 VTGNLLS--NCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
I D+ +S I ++LG+ A + I + +Y KGL +
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
I+EA L D + P Y + CK + EKV +L E +Q+G
Sbjct: 503 KRIEEAYSLCCD-MKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Query: 655 CSAVISGMCKY-GTIEEARKVF----SNLRERKLLTESD 688
V S + +Y G E R VF S E +++SD
Sbjct: 562 KFQVYSLLSRYRGDFSEFRSVFEKWKSEFTENVDVSDSD 600
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 36/130 (27%)
Query: 560 GEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFM 619
GE ++A + NK+I++ C P++ Y L KG +G +DEA
Sbjct: 261 GEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT----------------- 303
Query: 620 YSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLR 679
VL+++ +G P V+C+ +I + G EEARKVF++L
Sbjct: 304 -------------------VLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE 344
Query: 680 ERKLLTESDT 689
+RKL+ + T
Sbjct: 345 KRKLVPDQYT 354
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 180 AADQLPELMDSQGKP--PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYN 237
A + L+D + P P +K + ++I M+ AG + V+ M K GV YN
Sbjct: 228 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK-GVPQSTVTYN 286
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+M T + +++ +YD + + + V++ +L+K +A R +E L V M +
Sbjct: 287 SLMS--FETSYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
RP AY +L+ G ++ V++ M++DR+ PD+ +Y T+++ N +E
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
FK +K G + YG+L++ + N V ++ + + SG +A+ I +++
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
F A ++ G+ PD + LL L + +E +L
Sbjct: 464 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 9/363 (2%)
Query: 317 GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIY 376
GN +G RV + K P+V++Y ++ GG+ +F+ M+S G Y
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 377 GSLVESFVAVNKVGAG---FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
++++FV +K F+ L D S + D +Y+ +I +EKA K+F
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGP 493
+ +G+ ++ L+ K + Y +Q+ + P + A + +
Sbjct: 273 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ--PDVVSYALLIKAYGRARRE 330
Query: 494 IMALEVFSYLKEKGYVSV-DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
AL VF + + G YNIL+D+ G +++A ++F + + PD +SY+
Sbjct: 331 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 390
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC-LGNV 611
+ +V+ +++ A + +I P+I Y L KG K ++++ M + L +
Sbjct: 391 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 450
Query: 612 TSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
+ + CK+ + +G EM G PP + ++S +EEA
Sbjct: 451 KANQTILTTIMDASGRCKNFGS--ALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 508
Query: 672 RKV 674
+++
Sbjct: 509 KEL 511
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 5/321 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N SY A R A+ + M S G PS ++I+++ + +
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 217 YHVYEKM--RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
V+E + K +KP +Y+ ++ + G+ + A V+ G+ + VT+ L
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ E+ ++ +M+ +PDV +Y +L++ + L V+EEM V
Sbjct: 289 ---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
P AY ++ + G VE+ +FK M+ D Y +++ ++V + +
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
K + G+ ++ Y LI+G N EK ++++ G++ + + ++
Sbjct: 406 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 465
Query: 455 EAKRMENFYKLLQQMEKLGFP 475
K + ++ME G P
Sbjct: 466 RCKNFGSALGWYKEMESCGVP 486
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 129/317 (40%), Gaps = 42/317 (13%)
Query: 196 SEKQFEILIRMHSDAGR---GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
SE F +LI + G RV V KM G P V Y +M++ R G + A
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCNNA 193
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI---DEMLEVLGRMREKLCRPDVFAYTVL 309
+++ + G + +T+ +++K + + +E+ E L ++ +PD Y ++
Sbjct: 194 EAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
Query: 310 VRILVPQGNLDGCLRV--------------------------------WEEMKKDRVEPD 337
+ + GN + +V +++M++ ++PD
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 313
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V++YA +I R EE +F+EM G Y L+++F V + K
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ DL Y ++ N + E A K F+ +G EP+ ++ L+ YA+A
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 458 RMENFYKLLQQMEKLGF 474
+E ++ ++M G
Sbjct: 434 DVEKMMEVYEKMRLSGI 450
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 180 AADQLPELMDSQGKP--PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYN 237
A + L+D + P P +K + ++I M+ AG + V+ M K GV YN
Sbjct: 235 AEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGK-GVPQSTVTYN 293
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+M T + +++ +YD + + + V++ +L+K +A R +E L V M +
Sbjct: 294 SLMS--FETSYKEVS-KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
RP AY +L+ G ++ V++ M++DR+ PD+ +Y T+++ N +E
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
FK +K G + YG+L++ + N V ++ + + SG +A+ I +++
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
F A ++ G+ PD + LL L + +E
Sbjct: 471 SGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 513
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 155/363 (42%), Gaps = 9/363 (2%)
Query: 317 GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIY 376
GN +G RV + K P+V++Y ++ GG+ +F+ M+S G Y
Sbjct: 160 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 219
Query: 377 GSLVESFVAVNKVGAG---FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
++++FV +K F+ L D S + D +Y+ +I +EKA K+F
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGP 493
+ +G+ ++ L+ K + Y +Q+ + P + A + +
Sbjct: 280 MVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ--PDVVSYALLIKAYGRARRE 337
Query: 494 IMALEVFSYLKEKGYVSV-DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
AL VF + + G YNIL+D+ G +++A ++F + + PD +SY+
Sbjct: 338 EEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTM 397
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDC-LGNV 611
+ +V+ +++ A + +I P+I Y L KG K ++++ M + L +
Sbjct: 398 LSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGI 457
Query: 612 TSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
+ + CK+ + +G EM G PP + ++S +EEA
Sbjct: 458 KANQTILTTIMDASGRCKNFGS--ALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEA 515
Query: 672 RKV 674
+++
Sbjct: 516 KEL 518
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 133/321 (41%), Gaps = 5/321 (1%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G N SY A R A+ + M S G PS ++I+++ + +
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 217 YHVYEKM--RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
V+E + K +KP +Y+ ++ + G+ + A V+ G+ + VT+ L
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
+ E+ ++ +M+ +PDV +Y +L++ + L V+EEM V
Sbjct: 296 ---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
P AY ++ + G VE+ +FK M+ D Y +++ ++V + +
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 412
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
K + G+ ++ Y LI+G N EK ++++ G++ + + ++
Sbjct: 413 FFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASG 472
Query: 455 EAKRMENFYKLLQQMEKLGFP 475
K + ++ME G P
Sbjct: 473 RCKNFGSALGWYKEMESCGVP 493
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 129/316 (40%), Gaps = 42/316 (13%)
Query: 196 SEKQFEILIRMHSDAGR---GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLA 252
SE F +LI + G RV V KM G P V Y +M++ R G + A
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKM----GSTPNVISYTALMESYGRGGKCNNA 200
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI---DEMLEVLGRMREKLCRPDVFAYTVL 309
+++ + G + +T+ +++K + + +E+ E L ++ +PD Y ++
Sbjct: 201 EAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 260
Query: 310 VRILVPQGNLDGCLRV--------------------------------WEEMKKDRVEPD 337
+ + GN + +V +++M++ ++PD
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPD 320
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
V++YA +I R EE +F+EM G Y L+++F V + K
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ DL Y ++ N + E A K F+ +G EP+ ++ L+ YA+A
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 458 RMENFYKLLQQMEKLG 473
+E ++ ++M G
Sbjct: 441 DVEKMMEVYEKMRLSG 456
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 181/443 (40%), Gaps = 14/443 (3%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
GY N ++N Y + + A + M G P+ F ++I G
Sbjct: 213 GYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFA 272
Query: 217 YHVYEKMRNKFG--VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ KM G V P YN +++ + G LDLA + D + G+D T+ L
Sbjct: 273 LQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGAL 332
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
V +AG DE L + M K + Y +V L +G+++G + V +M +
Sbjct: 333 VDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNM 392
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+ D A ++ GL G V+E +++ K + D + +L+ FV K+
Sbjct: 393 QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQ 452
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+L ++ G D + LI+G K E+A +++ I+ + + ++ +
Sbjct: 453 ILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLS 512
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE--KKGPI-MALEVFSYLKEKG---Y 508
+ ++ ME I D+ + ++ E K G + A ++ S ++++
Sbjct: 513 KRGMAGAAEAVVNAME------IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKS 566
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
VS+ +NI+++ L K G +KA + + + PDS +Y I ++ E
Sbjct: 567 VSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVEL 626
Query: 569 HNKIIEMSCIPSIAAYKCLTKGL 591
H+ +I P Y + + L
Sbjct: 627 HDYLILQGVTPHEHIYLSIVRPL 649
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 197/452 (43%), Gaps = 31/452 (6%)
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
R + VY++M + G V +N ++ + + L ALSV+ + G+ V+F ++
Sbjct: 201 RFWKVYKEM-DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 275 VKGLCQAGRIDEMLEVLGR---MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
+ G C+ G + L++LG+ M P+ Y ++ G LD R+ +M K
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVK 319
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
V+ + Y ++ G +E L EM SKG +++ IY S+V +
Sbjct: 320 SGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEG 379
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQE-GLEPDFLSVKPLL 450
+L+D+ S + D ++ GLC N + K FQ I E L D + L+
Sbjct: 380 AMSVLRDMNSKNMQIDRFTQAIVVRGLCR-NGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Query: 451 VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE---KKGPI-MALEVF-SYLKE 505
+ K++ ++L M G +D ++ F ++ K+G + ALE++ +K
Sbjct: 439 HHFVRDKKLACADQILGSMLVQGLS-LDAIS--FGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 506 KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQA 565
++ IYN +++ L K G A ++ +N +K D +Y+ + + G +++A
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAV---VNAMEIK-DIVTYNTLLNESLKTGNVEEA 551
Query: 566 CECHNKIIEMSCIPSIA--AYKCLTKGLCKIGEIDEA-----MMLVRDCLGNVTSGPMEF 618
+ +K+ + S++ + + LCK G ++A M+ R + P
Sbjct: 552 DDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV------PDSI 605
Query: 619 MYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
Y + K EKV+ + + ++ QG P
Sbjct: 606 TYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/450 (19%), Positives = 186/450 (41%), Gaps = 67/450 (14%)
Query: 313 LVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLID 372
L P L G +R ++ PDV + +++ + G + Y + ++ +++G +
Sbjct: 128 LSPLHVLSGLIRSYQACGS---SPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVS 182
Query: 373 RAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
+ + + VN++ + + K++ S GY ++ +N +I C +K +A +F
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 433 VTIQEGLEPDFLS-------------------------------VKPLLVLY-------A 454
++ G+ P+ +S V P V Y
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI----MALEVFSYLKEKG-YV 509
+A R++ ++ M K G +D R + V+ G AL + + KG V
Sbjct: 303 KAGRLDLAERIRGDMVKSG---VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVV 359
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+ IYN ++ L G+++ A+S+ ++N N++ D F+ +I + G +K+A E
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGN--VTSGPMEFMYSLTVIHA 627
+I E + I + L + D+ + LG+ V ++ + T+I
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVR----DKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 628 -CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
K E+ + + + M++ V+ +++++G+ K G A V + + +
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----- 530
Query: 687 SDTIVYDEFLIDHMKK---KTADLVMSGLK 713
D + Y+ L + +K + AD ++S ++
Sbjct: 531 -DIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/486 (18%), Positives = 192/486 (39%), Gaps = 57/486 (11%)
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
F LV+ Q G EV+ + R + V A + L+ +D +V++EM
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
+V + +I ++ E +F M G + + +++ +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 390 GAGFDLLKD--LVSSGYRADLGI-YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
LL ++S + + + YN++I G C + + A ++ ++ G++ + +
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 447 KPLLVLYAEAKRMENFYKLLQQMEKLGFPVID--------------DLARFFSIFVEKKG 492
L+ Y A + +L +M G V D+ S+ +
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNS 389
Query: 493 PIMALEVFSY------LKEKGYV-----------------SVDIYNILMDSLHKVGEMKK 529
M ++ F+ L GYV + +N LM + K
Sbjct: 390 KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR----DK 445
Query: 530 ALSLFDEINGA----NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
L+ D+I G+ L D+ S+ I ++ G++++A E ++ +I+M+ ++ Y
Sbjct: 446 KLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYN 505
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
+ GL K G A +V N Y+ + + K+ + E+ +L++M +
Sbjct: 506 SIVNGLSKRGMAGAAEAVV-----NAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQK 560
Query: 646 QGCPPGN--VVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKKK 703
Q V + +I+ +CK+G+ E+A++V + ER ++ D+I Y + K +
Sbjct: 561 QDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVV--PDSITYGTLITSFSKHR 618
Query: 704 TADLVM 709
+ + V+
Sbjct: 619 SQEKVV 624
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/449 (19%), Positives = 191/449 (42%), Gaps = 16/449 (3%)
Query: 222 KMRNKFGVKPRVF-LYNRIMDALIRTGHLDLALSVYDDFKE-DGLDEERVTFMVLVKGLC 279
++ N G P YNR L+R G + +S+ +D + D LD +++ K
Sbjct: 392 ELHNSNGRSPETSDAYNR----LLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACK 447
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVM 339
+ + E R + + P + + +L+ + +++G V +++ + D
Sbjct: 448 KQRAVKEAF----RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDL 399
Y T+I+ + G+V+ + +F +M + G + +G+L++ +V F L
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG--LEPDFLSVKPLLVLYAEAK 457
S + D ++N LI ++A + E ++PD +S+ L+ A
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDI-YN 515
++E ++ Q + K G ++ K G A ++ +KEK ++ ++
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
L+D + +A + + ++ + SYS + + + K+A E + KI +
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
P+I+ L LC+ ++ +AM + D + + P YS+ ++ + + +D E
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYL-DEIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCK 664
+L++ G P ++C + S +CK
Sbjct: 803 SFKLLSQAKGDGVSPNLIMCRCITS-LCK 830
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 131/288 (45%), Gaps = 3/288 (1%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M + G + F LI + AG+ + + Y +R+K VKP ++N ++ A ++G
Sbjct: 528 MSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK-NVKPDRVVFNALISACGQSG 586
Query: 248 HLDLALSVYDDFKEDG--LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
+D A V + K + +D + ++ L+K C AG+++ EV + + R
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
YT+ V G+ D ++++MK+ V PD + ++ +I + ++E + + ++ K
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 366 SKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
S+G + Y SL+ + +L + + S R + N LI LC N+
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 426 KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
KA + GL+P+ ++ L++ E +KLL Q + G
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 137/340 (40%), Gaps = 14/340 (4%)
Query: 148 FFHWAEKQKGYHHNF-----------ASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPS 196
FF +KQ+ F +++N + A + L+ G
Sbjct: 442 FFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTAD 501
Query: 197 EKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVY 256
K + LI + +G+ ++ V+ +M N GV+ + + ++D R G + A Y
Sbjct: 502 CKLYTTLISSCAKSGKVDAMFEVFHQMSNS-GVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 257 DDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL--CRPDVFAYTVLVRILV 314
+ + +RV F L+ Q+G +D +VL M+ + PD + L++
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
G ++ V++ + K + Y + S G + ++K+MK K D
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
+ +L++ + F +L+D S G R Y++L+ CN ++KA +L++
Sbjct: 681 FFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
L P ++ L+ E ++ + L +++ LG
Sbjct: 741 KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 165 YNAF-AYCMNRNNHHRAADQLPELMDSQGKP--PSEKQFEILIRMHSDAGRGLRVYHVYE 221
+NA + C RA D L E M ++ P P L++ +AG+ R VY+
Sbjct: 575 FNALISACGQSGAVDRAFDVLAE-MKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
M +K+G++ +Y +++ ++G D A S+Y D KE + + V F L+ A
Sbjct: 634 -MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
+DE +L + + R +Y+ L+ + L ++E++K ++ P +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
+IT L G ++ + E+K+ G + Y L+ + + F LL
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKA 427
G +L I I LC +FEKA
Sbjct: 813 DGVSPNL-IMCRCITSLCK-RRFEKA 836
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 44/305 (14%)
Query: 128 TPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAF---AYCMNRNNH------- 177
T S V L+ Q++P L+ F W +Q+GY HN +Y+ A RNN
Sbjct: 74 TNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEE 133
Query: 178 ---------------------------HRAADQLPELMDSQGKPPSEKQFEILIRMHSDA 210
+RA D +++ S P + + +L+
Sbjct: 134 VIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKR 193
Query: 211 GRGLRVYHVY-------EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG 263
L V +VY K GV P F+ N I+ A + +D A+ V+ + G
Sbjct: 194 FNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYG 253
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ T+ LVKG+C+ GR+ + L M+ K P+ Y VL+ L + LD +
Sbjct: 254 SEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAV 313
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
V +M + + PD++ Y T++T L GGR E + +E K + ++ Y +L++
Sbjct: 314 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Query: 384 VAVNK 388
+NK
Sbjct: 374 YFLNK 378
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 217/483 (44%), Gaps = 36/483 (7%)
Query: 118 VTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYH--HNFASYNAFAYCMNRN 175
++ L RRV P E + N TLS FH+ G H H+ + + F N +
Sbjct: 22 ISSLVDFRRVFP---PETPNHKNNITLSR--FHFL----GTHFLHSLGAPDKFPNRFNDD 72
Query: 176 N-------------HHRAA--DQLPELMDSQGKPPSEK-QFEILIRMHSDAGRGLRVYHV 219
HHR + +++ ++D G +E+ E++ R SD + ++
Sbjct: 73 KDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSD----WKPAYI 128
Query: 220 YEKMRNKFGVK-PRVFLYNRIMDALIRTGHLDLALSVYDDF-KEDGLDEERVTFMVLVKG 277
++ K V LYN I+D L + + V+D+ K DG E+ T+ VL+
Sbjct: 129 LSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNR 187
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
A ++DE + V R +E D+ A+ L+ L +++ ++ +++ D
Sbjct: 188 YAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCD 246
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+ A I+ G G V E +K++ + D YG+++ + K+G +L +
Sbjct: 247 IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+ + D+ I NN+I+ LC + +A ++F+ ++G +P+ ++ LL + +
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 458 RMENFYKLLQQME-KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
R E ++L+++ME K G +D+ + + ++ + + + K K ++ D+YN+
Sbjct: 367 RTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNL 426
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
+ + + +K ++ E+ + L PD +Y+I I G+I +A +++
Sbjct: 427 MFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKG 486
Query: 577 CIP 579
+P
Sbjct: 487 MVP 489
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 161/336 (47%), Gaps = 15/336 (4%)
Query: 217 YHVYEKMRNKFG-VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
+ V+++M + G V + Y +++ +D A+ V++ KE G+D++ V F L+
Sbjct: 163 HQVFDEMSKRDGFVNEKT--YEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLL 220
Query: 276 KGLCQAGRIDEMLEVL--GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LC+ + E E L R RE C D+ A +++ GN+ R W+++ +
Sbjct: 221 MWLCRYKHV-EFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASK 277
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
PDV++Y T+I L+ G++ + L++ M D I +++++ ++
Sbjct: 278 CRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEAL 337
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG--LEPDFLSVKPLLV 451
++ +++ G ++ YN+L++ LC + + EK +L + +G P+ ++ LL
Sbjct: 338 EVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL- 396
Query: 452 LYAEAKRMENFYKLLQQMEKLGFPVIDDLARF-FSIFVEKKGPIMALEVFSYLKEKGY-V 509
++R ++ +L++M K + DL F ++V+ E++S ++ G
Sbjct: 397 --KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPD 545
Y I + LH G++ +ALS F E+ + P+
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 410 IYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVKPLLVL---YAEAKRMENFYKL 465
+YN +++ L + +FE+ H++F +++ ++G F++ K VL YA A +++ +
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDG----FVNEKTYEVLLNRYAAAHKVDEAVGV 200
Query: 466 LQQMEKLGFPVIDDLARFFSIFV---EKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLH 522
++ ++ G + DDL F + + K A +F + + + N++++
Sbjct: 201 FERRKEFG--IDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWC 258
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA 582
+G + +A + +I + +PD SY I G++ +A E + + + P +
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 583 AYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNE 642
+ LC I EA+ + R+ + P Y+ + H CK EKV ++ E
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFRE-ISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEE 377
Query: 643 MMQQG--CPPGNVVCSAVI 659
M +G C P +V S ++
Sbjct: 378 MELKGGSCSPNDVTFSYLL 396
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 164/394 (41%), Gaps = 39/394 (9%)
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR-IDEMLEVL 291
V LYN + L + D A VY+ + + + VT +L+ L +AGR E+ E+
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
+M EK + + LV+ +G + L + EM+K + + + Y T++ +
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+EE LF EM+ KG A Y L++++ + LL+++ G ++ Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 412 NNLIEGLCNLNKF-EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
LI K + A F + GL+P S L+ Y+ + E Y ++M
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 471 KLGF--------PVID------DLARFFSI----------------------FVEKKGPI 494
K G V+D D + I F ++ I
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYI 572
Query: 495 MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
A +V S + G SV YN+LM++ + G+ K L E+ NLKPDS +YS I
Sbjct: 573 EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
Query: 554 LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCL 587
V + + K+A H +++ +P +Y+ L
Sbjct: 633 YAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 5/300 (1%)
Query: 179 RAADQLPEL---MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFL 235
R+A ++ E+ M +G S+ F L++ D G + +M K G++ +
Sbjct: 323 RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKK-GIRSNTIV 381
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
YN +MDA ++ H++ ++ + ++ GL T+ +L+ + + D + +L M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 296 EKLCRPDVFAYTVLVRILVPQGNL-DGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
+ P+V +YT L+ + D + MKK ++P +Y +I S G
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
E+ Y F+EM +G Y S++++F G ++ K ++ + YN L
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
++G + +A + + GL+P ++ L+ YA + +LL++M L
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 146/361 (40%), Gaps = 14/361 (3%)
Query: 102 ILDAFRKNGYKWGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHN 161
I + + G KW V L K L E L +QT ++KG N
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVK-SFCDEGLKEEALVIQTE-----------MEKKGIRSN 378
Query: 162 FASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYE 221
YN N++NH + L M +G PS + IL+ ++ + V +
Sbjct: 379 TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHL-DLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+M + G++P V Y ++ A RT + D+A + K+ GL ++ L+
Sbjct: 439 EMED-LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSV 497
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
+G ++ M ++ +P V YT ++ G+ + +W+ M +++++ +
Sbjct: 498 SGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y T++ G + G E + E G Y L+ ++ + LLK++
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
+ + D Y+ +I + F++A ++ ++ G PD S + L + + + +
Sbjct: 618 ALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTK 677
Query: 461 N 461
N
Sbjct: 678 N 678
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 126/290 (43%), Gaps = 8/290 (2%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M+ +G + + L+ ++ + V ++ +MR+K G+KP YN +MDA R
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK-GLKPSAATYNILMDAYARRM 428
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML-EVLGRMREKLCRPDVFAY 306
D+ ++ + ++ GL+ ++ L+ + ++ +M + RM++ +P +Y
Sbjct: 429 QPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL---SNGGRVEEGYVLFKE 363
T L+ G + +EEM K+ ++P V Y +++ + G++ E + L
Sbjct: 489 TALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
K KG R Y +L++ F D++ + G + + YN L+ +
Sbjct: 549 EKIKG---TRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
K +L + L+PD ++ ++ + + + + + M K G
Sbjct: 606 DAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSG 655
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 120/584 (20%), Positives = 223/584 (38%), Gaps = 66/584 (11%)
Query: 99 ARFILDAFRKNGYKWGPPVVTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGY 158
A IL + NG PPV+ +L + SL+ E+ A K
Sbjct: 432 AMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEI----------------ARKDANL 475
Query: 159 HHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYH 218
+ A C RN + AA E M + G P + +I+ L +
Sbjct: 476 AAVGLAVVTTALCSQRN--YIAALSRIEKMVNLGCTPLPFSYNSVIKC-------LFQEN 526
Query: 219 VYEKMRNKFGV------KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFM 272
+ E + + + P V Y +++ L + D A ++ D +E GL +
Sbjct: 527 IIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYS 586
Query: 273 VLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
++ L + GR+ E E +M E +PD AY +++ G +D + EE+ K
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKH 646
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ P Y +I+G G +E+G +M G + +Y +L+ F+
Sbjct: 647 FLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
F L + + + D Y L+ GL +K QV ++ G E
Sbjct: 707 FTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKR---QVIVEPGKE------------ 751
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD 512
KLLQ++ + L S A+EV +K+ ++
Sbjct: 752 -----------KLLQRLIR-----TKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLY 795
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI 572
++N ++ G + +A + + + + P+ +Y+I + H++ G+I+ A +
Sbjct: 796 LHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGT 855
Query: 573 IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
+C P Y L KGLC +A+ L+ + + P + Y + C S
Sbjct: 856 ---NCEPDQVMYSTLLKGLCDFKRPLDALALMLE-MQKSGINPNKDSYEKLLQCLCYSRL 911
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
+ + V+ +M P ++ + +I +C+ + EAR +F+
Sbjct: 912 TMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFA 955
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 111/542 (20%), Positives = 215/542 (39%), Gaps = 20/542 (3%)
Query: 141 NPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQF 200
P ++ F++ G + + ++ +C+ + A + + + G PS
Sbjct: 110 QPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSS 169
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
+++ + R L +H +E+++ + G ++ R+ L GHL+ A+ + D
Sbjct: 170 SLVVDELCNQDRFLEAFHCFEQVKER-GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLC 228
Query: 261 EDGLDEERV---TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQG 317
G+ + + L C+ G E + M D YT L++
Sbjct: 229 --GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDN 286
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
N+ +R++ M + E D + T+I G G +++G V+F +M KG + Y
Sbjct: 287 NMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYH 346
Query: 378 SLVESFVAVNKVGAGFDL-LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
++ S+ V L + + S ++ Y NLI G +KA L +
Sbjct: 347 IMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLD 406
Query: 437 EGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF----PVIDDLARFFSIFVEKKG 492
G+ PD ++ LL + + ++ +LQ + G PVIDDL +E K
Sbjct: 407 NGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGN-----IEVKV 461
Query: 493 PIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIA 552
+ E+ K+ +V + ++ +L ALS +++ P FSY+
Sbjct: 462 ESLLGEIAR--KDANLAAVGL-AVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 553 ILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVT 612
I C I+ N I E+ +P + Y + LCK + D A ++ D + +
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAII-DAMEELG 577
Query: 613 SGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEAR 672
P +YS + K + +M++ G P + +I+ + G I+EA
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 673 KV 674
++
Sbjct: 638 EL 639
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 212/528 (40%), Gaps = 46/528 (8%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
LIR ++ G+ Y + G+ P + + ++ L++ D A + D
Sbjct: 101 LIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIAS 160
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
G R + ++V LC R E +++E+ ++ L + L G+L+
Sbjct: 161 GYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEA 220
Query: 323 LRVWEEM-KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
+ + + + R+ V Y ++ G E LF M+ G+ +D+ +Y L++
Sbjct: 221 IGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMK 280
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ N + L +V + D I+N LI G L +K +F I++G++
Sbjct: 281 EYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQS 340
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI-------FVEKKGPI 494
+ + ++ Y + ++ Y L + G +D++R F +K G
Sbjct: 341 NVFTYHIMIGSYCKEGNVD--YALRLFVNNTGS---EDISRNVHCYTNLIFGFYKKGGMD 395
Query: 495 MALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEI--NGANLKPDSFS--Y 549
A+++ + + G V I Y +L+ L K E+K A+ + I NG + P
Sbjct: 396 KAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLG 455
Query: 550 SIAILCHVDLGEIKQA----------------CECHN---------KIIEMSCIPSIAAY 584
+I + LGEI + C N K++ + C P +Y
Sbjct: 456 NIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSY 515
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
+ K L + I++ LV + + + P Y + V CK ND + +++ M
Sbjct: 516 NSVIKCLFQENIIEDLASLV-NIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVY 692
+ G P + S++I + K G + EA + F+ + E + + D I Y
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI--QPDEIAY 620
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/511 (18%), Positives = 191/511 (37%), Gaps = 84/511 (16%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA------- 281
+ V Y ++ + G +D A+ + ++G+ + +T+ VL+K L +
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 282 ---------------------GRIDEMLE-VLGRMREKLCRPDVFAYTVLVRILVPQGNL 319
G I+ +E +LG + K V+ L Q N
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNY 493
Query: 320 DGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSL 379
L E+M P +Y ++I L +E+ L ++ + D Y +
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 380 VESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
V N A F ++ + G R + IY+++I L + +A + F ++ G+
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Query: 440 EPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK-----LGFPVIDDLARFFSIFVEKKGPI 494
+PD ++ ++ YA R++ +L++++ K F ++ F + + +KG
Sbjct: 614 QPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG-- 671
Query: 495 MALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
+ + E G +V +Y L+ K G+ K + +LF + ++K D +Y I +
Sbjct: 672 --CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAY-ITL 728
Query: 554 LCHV---------------------------------------DLGEIKQACECHNKIIE 574
L + + G A E K ++
Sbjct: 729 LSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VK 787
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
S IP++ + + G C G +DEA + + + P Y++ + ++ D E
Sbjct: 788 KSIIPNLYLHNTIITGYCAAGRLDEAYNHL-ESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKY 665
I + C P V+ S ++ G+C +
Sbjct: 847 SAIDLFE---GTNCEPDQVMYSTLLKGLCDF 874
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
R D+ I H L L V +GL+ ++VT + V+ LC+ GR+DE +++ + EK
Sbjct: 134 RAPDSSISNVHRVLNLMV-----NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK 188
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD-RVEPDVMAYATIITGLSNGGRVEE 356
PD + Y L++ L +L +EM+ D V+PD++++ +I + N + E
Sbjct: 189 HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE 248
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
L ++ + G D +Y ++++ F ++K + K + G D YN LI
Sbjct: 249 AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF 308
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
GL + E+A + + G EPD + L+
Sbjct: 309 GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 175 NNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVF 234
+N HR + LM + G P + +I +R + GR + +++ K P +
Sbjct: 141 SNVHRVLN----LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTY 195
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
YN ++ L + L + D+ ++D + + V+F +L+ +C + + E + ++ +
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK 255
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
+ +PD F Y +++ + V+++MK++ VEPD + Y T+I GLS GR
Sbjct: 256 LGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGR 315
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLV 380
VEE + K M G+ D A Y SL+
Sbjct: 316 VEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
V+ V M N G++P + + +L TG +D A + + E + T+ L+
Sbjct: 143 VHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL 201
Query: 276 KGLCQAGRIDEMLEVLGRMREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
K LC+ + + E + MR+ +PD+ ++T+L+ + NL + + ++
Sbjct: 202 KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGF 261
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+PD Y TI+ G + E ++K+MK +G D+ Y +L+ +V
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLC 419
LK +V +GY D Y +L+ G+C
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII- 573
+I + SL + G + +A L E+ + PD+++Y+ + K C+C + +
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL---------KHLCKCKDLHVV 213
Query: 574 ---------EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTV 624
+ P + ++ L +C + EAM LV LGN P F+Y+ +
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSK-LGNAGFKPDCFLYNTIM 272
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
C + + +GV +M ++G P + + +I G+ K G +EEAR + +
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY- 331
Query: 685 TESDTIVYDEFL 696
E DT Y +
Sbjct: 332 -EPDTATYTSLM 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
E+ D P F ILI ++ ++ K+ N G KP FLYN IM
Sbjct: 219 EMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNA-GFKPDCFLYNTIMKGFCT 277
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
A+ VY KE+G++ +++T+ L+ GL +AGR++E L M + PD
Sbjct: 278 LSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 306 YTVLVRILVPQG 317
YT L+ + +G
Sbjct: 338 YTSLMNGMCRKG 349
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 180 AADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRI 239
A D + EL + PP + L++ VY ++MR+ F VKP + + +
Sbjct: 178 AKDLMKELTEKHS-PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 240 MDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+D + + +L A+ + G + + ++KG C + E + V +M+E+
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
PD Y L+ L G ++ + M EPD Y +++ G+ G
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 354 VEEGYVLFKEMKSKGHL-IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS--GYRADLGI 410
+ + LF + + + +D + S+++S+ ++ V L + ++ S +R
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 411 YNNLIEGLCNL--NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
+ L+ C + H++ + + GLEPD ++ + E R++ L+++
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 469 M-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVG 525
+ EK P + K + E +++ V D+ + IL+D++
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
+++A+ L ++ A KPD F Y+ + L + +A + K+ E P Y
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 586 CLTKGLCKIGEIDEAMMLVR 605
L GL K G ++EA M ++
Sbjct: 305 TLIFGLSKAGRVEEARMYLK 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
+L +V++G D + + LC + ++A L + ++ PD + LL
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEK----KGPIMALEVFSYLKEKGY-V 509
+ K + Y+ + +M F V DL F +I ++ K A+ + S L G+
Sbjct: 206 KCKDLHVVYEFVDEMRD-DFDVKPDLVSF-TILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+YN +M + + +A+ ++ ++ ++PD +Y+ I G +++A
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIG 595
+++ P A Y L G+C+ G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 138/309 (44%), Gaps = 4/309 (1%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEK-QFEILIRMHSDAGRGLRVYHVYEK 222
S+NA C+ +H AA + +G P + + I+I S G + V ++
Sbjct: 223 SFNALLRCLCERSHVSAAKSV--FNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAG 282
M G P Y+ +++ L RTG ++ ++ ++D+ K G + + ++ A
Sbjct: 281 MVES-GFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR 339
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
DE + RM ++ C P++ Y+ LV L+ + L ++EEM V P
Sbjct: 340 DFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVT 399
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+ + L + G V++++ + G I + Y L++ K G ++ ++ S
Sbjct: 400 SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
GY +D+ +Y +++GLC + E A + + +++G P+ L + + E
Sbjct: 460 GYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELA 519
Query: 463 YKLLQQMEK 471
YKL +++K
Sbjct: 520 YKLFLKIKK 528
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 172/408 (42%), Gaps = 45/408 (11%)
Query: 148 FFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEI----L 203
FF WA ++ G + SY+ + R + + M +G P + I
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 204 IRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG 263
+R+H R + ++ E FGVK +N ++ L H+ A SV++ K+
Sbjct: 197 VRVHY-VRRAIELFEESES----FGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGN 250
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ + ++ +++ G + G ++EM +VL M E PD +Y+ L+ L G ++ +
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
+++ +K PD Y +I + +E ++ M + + Y LV
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
+ KV ++ ++++S G G+ + ++ LC+ A ++Q + + G
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG----- 425
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL 503
+ E+ YKLL + L+RF K G M L V+ +
Sbjct: 426 ------------CRISESAYKLL----------LKRLSRF-----GKCG--MLLNVWDEM 456
Query: 504 KEKGYVS-VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
+E GY S V++Y ++D L +G ++ A+ + +E P+ F YS
Sbjct: 457 QESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 172/413 (41%), Gaps = 32/413 (7%)
Query: 309 LVRILVPQGNLDGCLRV----WEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+V ++ +GNL G V W +++ V DV +Y+ I+ L + K M
Sbjct: 119 IVADVLNRGNLSGEAMVTFFDWA-VREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGM 177
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+G D ++SFV V+ V +L ++ S G + +N L+ LC +
Sbjct: 178 VCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHV 237
Query: 425 EKAHKLFQVTIQEGLEP-DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
A +F ++G P D S ++ +++ +E K+L++M + GF D L+
Sbjct: 238 SAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGP-DCLS-- 292
Query: 484 FSIFVE---KKGPIM-ALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEIN 538
+S +E + G I ++E+F +K KG V ++YN ++ + + +++ + +
Sbjct: 293 YSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRML 352
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEID 598
+P+ +YS + + ++ A E +++ +P+ K LC G
Sbjct: 353 DEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 599 EAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
AM++ + E Y L + + ++ V +EM + G P V +
Sbjct: 413 AAMVIYQKSR-KAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYI 471
Query: 659 ISGMCKYGTIEEA---------------RKVFSNLRERKLLTESDTIVYDEFL 696
+ G+C G +E A R V+S L + + + + Y FL
Sbjct: 472 VDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFL 524
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 154/381 (40%), Gaps = 78/381 (20%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFHWA-EKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
R +TPSL++++LK Q NP + K F A E+ Y HN + Y + ++N
Sbjct: 8 RVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKY 67
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGR---GLRVY----------------------- 217
+ E M + F +IR S AGR + ++
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 218 ---------HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
H++ K + V R+ N +M L + DLA V+ + G +R
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 269 VTFMVLVKGLCQAGRIDEMLEVL----GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
++ +L+KG C G+++E +L R+ +K D+ Y +L+ L G +D +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 325 V-----------------------WEEMKK--DRVE------------PDVMAYATIITG 347
+ WE + +RV+ P + +Y+ + T
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL-KDLVSSGYRA 406
L G++ EG + M+SKG IYG+ V++ K+ ++ K+++
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 407 DLGIYNNLIEGLCNLNKFEKA 427
+G+YN LI+GLC+ K +A
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEA 388
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 154/381 (40%), Gaps = 78/381 (20%)
Query: 125 RRVTPSLVAEVLKVQTNPTLSFKFFHWA-EKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
R +TPSL++++LK Q NP + K F A E+ Y HN + Y + ++N
Sbjct: 8 RVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKY 67
Query: 184 LPELMDSQGKPPSEKQFEILIRMHSDAGR---GLRVY----------------------- 217
+ E M + F +IR S AGR + ++
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 218 ---------HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
H++ K + V R+ N +M L + DLA V+ + G +R
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 269 VTFMVLVKGLCQAGRIDEMLEVL----GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
++ +L+KG C G+++E +L R+ +K D+ Y +L+ L G +D +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 325 V-----------------------WEEMKK--DRVE------------PDVMAYATIITG 347
+ WE + +RV+ P + +Y+ + T
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL-KDLVSSGYRA 406
L G++ EG + M+SKG IYG+ V++ K+ ++ K+++
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 407 DLGIYNNLIEGLCNLNKFEKA 427
+G+YN LI+GLC+ K +A
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEA 388
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 13/318 (4%)
Query: 127 VTPS--LVAEVL---KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAA 181
V+PS LV +V+ K +T+P +FF W+ K G + +N + H A
Sbjct: 63 VSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAM 122
Query: 182 DQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMD 241
L + + + ++ F I+ G+ ++ K+ +KF F I+
Sbjct: 123 QILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQDGFTVTAIIS 181
Query: 242 ALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
AL GH+ AL V K+ E + L+ G + E V+ M+ P
Sbjct: 182 ALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITP 241
Query: 302 DVFAYTVLVRILV-------PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRV 354
D+F + L+ L P G + L + EM+ +++P M+Y +++ L RV
Sbjct: 242 DLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRV 301
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
E + ++MK G D Y +V + G G ++ +++ G+R + Y +L
Sbjct: 302 RESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDL 361
Query: 415 IEGLCNLNKFEKAHKLFQ 432
I LC + + A +LF+
Sbjct: 362 IGVLCGVERVNFALQLFE 379
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 42/212 (19%)
Query: 228 GVKPRVFLYNRIMDALIR-------TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
G+ P +F +N ++ L +G + AL++ + + + +++ +L+ L +
Sbjct: 238 GITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGR 297
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
R+ E ++L +M+ C PD +Y +VR+L
Sbjct: 298 TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVL--------------------------- 330
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
Y T GR +G + EM +G +R Y L+ V +V L + +
Sbjct: 331 YLT--------GRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMK 382
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQ 432
S +Y+ LI LC FEK +L++
Sbjct: 383 RSSVGGYGQVYDLLIPKLCKGGNFEKGRELWE 414
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
+MR+ + ++P YN ++ L RT + + + + K G D + ++ +V+ L
Sbjct: 275 EMRS-YKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLT 333
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
GR + +++ M E+ RP+ Y L+ +L ++ L+++E+MK+ V Y
Sbjct: 334 GRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVY 393
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKS 366
+I L GG E+G L++E S
Sbjct: 394 DLLIPKLCKGGNFEKGRELWEEALS 418
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 7/256 (2%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
PS + F IL+ + + + ++E+M+ VKP V Y +++ R + +A+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMK-AMNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 255 VYDDFKEDGLDEERVTFMV---LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
V ++ K + E + FMV ++ GL +AGR+ E L ++ R P + Y LV+
Sbjct: 307 VLEEMK---MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
G+L G ++ + M V+P Y S + EEG L+ ++ GH
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
DR Y +++ K+ + K++ + G DL LI LC L E+A + F
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEF 483
Query: 432 QVTIQEGLEPDFLSVK 447
++ G+ P +++ K
Sbjct: 484 DNAVRRGIIPQYITFK 499
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/439 (20%), Positives = 191/439 (43%), Gaps = 22/439 (5%)
Query: 181 ADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIM 240
L +D G PS + L S + L + +M+ F + P +F + ++
Sbjct: 85 GSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLF--DSVV 142
Query: 241 DALIRTGHLDLALS-VYDDFKEDGLDE--ERVTFMVLVKGLCQAGRIDEMLEVL--GRMR 295
++L + ++A S V+D + D TF+VL++ +AG + + + R
Sbjct: 143 NSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSY 202
Query: 296 EKLCRP--DVFAYTVLVRILVPQGNLDGCL----RVWEEMKKDRVEPDVMAYATIITGLS 349
E +C+ ++ VL+ L +G++ R+ M + V P V + ++ G
Sbjct: 203 EPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWV-PSVRIFNILLNGWF 261
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
++++ L++EMK+ YG+L+E + + +V ++L+++ + +
Sbjct: 262 RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFM 321
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
++N +I+GL + +A + + P ++ L+ + +A + K+L+ M
Sbjct: 322 VFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Query: 470 EKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGE 526
G P FF F + + ++ L E G+ S D Y++++ L + G+
Sbjct: 382 MTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH-SPDRLTYHLILKMLCEDGK 440
Query: 527 MKKALSLFDEINGANLKPDSFSYS--IAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
+ A+ + E+ + PD + + I +LC +++ +++A E + + IP +
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEM--LEEAFEEFDNAVRRGIIPQYITF 498
Query: 585 KCLTKGLCKIGEIDEAMML 603
K + GL G D A L
Sbjct: 499 KMIDNGLRSKGMSDMAKRL 517
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 124/293 (42%), Gaps = 19/293 (6%)
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL---YAEAKRM 459
G+ ++++++ LC +FE A L ++ + +S +VL YA A +
Sbjct: 130 GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMV 189
Query: 460 ENFYKLLQQMEKLGFPVIDDLA--RFFSIFVE---KKGPI----MALEVFSYLKEKGYV- 509
+ + + + PV R + ++ K+G + M LE + +V
Sbjct: 190 QQAIRAFE-FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVP 248
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC- 568
SV I+NIL++ + ++K+A L++E+ N+KP +Y I + + ++ A E
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 569 -HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHA 627
K+ EM + + + GL + G + EA+ ++ SGP Y+ V +
Sbjct: 309 EEMKMAEMEI--NFMVFNPIIDGLGEAGRLSEALGMMERFFV-CESGPTIVTYNSLVKNF 365
Query: 628 CKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
CK+ D +L MM +G P + K+ EE ++ L E
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/471 (19%), Positives = 180/471 (38%), Gaps = 70/471 (14%)
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
E ++ G++P V L + + D L + L ++ + + K G F +V LC+
Sbjct: 89 ESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKP-GFTLSPSLFDSVVNSLCK 147
Query: 281 AGRIDEMLE-VLGRMRE----KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
A + V R+R L D F VL+R G + +R +E + E
Sbjct: 148 AREFEIAWSLVFDRVRSDEGSNLVSADTF--IVLIRRYARAGMVQQAIRAFEFARS--YE 203
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P V AT + L VL + +GH+ + ++Y + ++G D
Sbjct: 204 P-VCKSATELRLLE---------VLLDALCKEGHVREASMY---------LERIGGTMD- 243
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
S + + I+N L+ G K ++A KL++ ++P ++ L+ Y
Sbjct: 244 ------SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCR 297
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
+R++ ++L++M+ MA +++ ++N
Sbjct: 298 MRRVQIAMEVLEEMK------------------------MAEMEINFM---------VFN 324
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
++D L + G + +AL + + P +Y+ + G++ A + ++
Sbjct: 325 PIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTR 384
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
P+ Y K K + +E M L + P Y L + C+
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI-EAGHSPDRLTYHLILKMLCEDGKLSL 443
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
+ V EM +G P + + +I +C+ +EEA + F N R ++ +
Sbjct: 444 AMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%)
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA 281
KM GV P YN + + +++Y E G +R+T+ +++K LC+
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
G++ ++V M+ + PD+ T+L+ +L L+ ++ + + P + +
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGH 369
I GL + G + L M S H
Sbjct: 499 KMIDNGLRSKGMSDMAKRLSSLMSSLPH 526
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 169/387 (43%), Gaps = 29/387 (7%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
++ + V + ++ +R+ L +A ++ + E + V++ ++ G Q+GRI
Sbjct: 101 DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRI 156
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
D+ LE+ M E+ ++ ++ +V+ LV +G +D + ++E M + DV+++ +
Sbjct: 157 DKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAM 208
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
+ GL+ G+V+E LF M + + + +++ + N++ L + +
Sbjct: 209 VDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVMPER-- 262
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
D +N +I G + KA LF E + +S ++ Y E K E
Sbjct: 263 --DFASWNTMITGFIRNREMNKACGLF----DRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 465 LLQQMEKLGF--PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY-NILMDSL 521
+ +M + G P + S + G + ++ + + + +I + L++
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
K GE+ A +FD NG + D S++ I + G K+A E +N++ + PS
Sbjct: 377 SKSGELIAARKMFD--NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRDCL 608
Y L G +++ M +D +
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 55/316 (17%)
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL-EPDFLSVKPLLV 451
F+L++ + SS R + LI LC + K +A KLF +GL E D ++ ++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLF-----DGLPERDVVTWTHVIT 85
Query: 452 LYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSV 511
Y + M +L +++ V S ++ K +A +F + E+ VS
Sbjct: 86 GYIKLGDMREARELFDRVDSRKNVVT--WTAMVSGYLRSKQLSIAEMLFQEMPERNVVS- 142
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
+N ++D + G + KAL LFDE+ N+ S++ + V G I +A
Sbjct: 143 --WNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAM----N 192
Query: 572 IIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL--GNVTSGPMEFMYSLTVIHACK 629
+ E + ++ + GL K G++DEA L DC+ N+ S ++ + +
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF-DCMPERNIIS------WNAMITGYAQ 245
Query: 630 SN---DAEKVIGVL-----------------NEMMQQGC------PPGNVVC-SAVISGM 662
+N +A+++ V+ N M + C P NV+ + +I+G
Sbjct: 246 NNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGY 305
Query: 663 CKYGTIEEARKVFSNL 678
+ EEA VFS +
Sbjct: 306 VENKENEEALNVFSKM 321
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 151/360 (41%), Gaps = 14/360 (3%)
Query: 122 SKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMN----RNNH 177
S + TP + + ++Q +F+FF WA Q+ Y H +YN ++ +N
Sbjct: 119 SSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQ 178
Query: 178 HRAADQLPELMDSQGKPPS--EKQFEILIRMHSDAGRGL-RVYHVYEKMRNKFGVKPRVF 234
R + + M K + EIL + R L V ++ R + +P +
Sbjct: 179 FRIVIDMLDYMKRNNKTVVLVDVLLEILRKY---CERYLTHVQKFAKRKRIRVKTQPEIN 235
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM 294
+N ++DAL + G + ++ + + + TF VL G C+ + +++L M
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM--KKDRVE-PDVMAYATIITGLSNG 351
E +P+ F Y + G +D +++ M K V P +A +I L+
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+ EE + L M S G L D + Y ++E KV + L ++ + GY D+ Y
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
N + LC K ++A KL+ ++ P + L+ ++ E + + +M+K
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK 474
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 9/232 (3%)
Query: 168 FAYCMNRNNHHRAA--DQLPELMD------SQGKPPSEKQFEILIRMHSDAGRGLRVYHV 219
F YC + +A D+ +L D S P+ K F ++I + + + +
Sbjct: 304 FTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFEL 363
Query: 220 YEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLC 279
+M + G P V Y +++ + +D A D+ G + VT+ ++ LC
Sbjct: 364 IGRMIST-GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVM 339
+ + DE L++ GRM E C P V Y +L+ + + DG W EM K DV
Sbjct: 423 ENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 340 AYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
Y +I GL + R +E L +E+ +KG + ++ S + V + A
Sbjct: 483 TYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKA 534
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 6/268 (2%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLD---EERVTFMVLVKGLCQAGRI 284
G KP F Y +D + G +D A ++D G TF +++ L + +
Sbjct: 298 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 357
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
+E E++GRM C PDV Y ++ + +D + +EM PD++ Y
Sbjct: 358 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 417
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
+ L + +E L+ M Y L+ F ++ F+ ++
Sbjct: 418 LRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDC 477
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
D+ Y +I GL + ++ ++A L + + +GL+ + L+ +E ++ +K
Sbjct: 478 VQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHK 537
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKG 492
+ + M+K +AR F++ ++K
Sbjct: 538 VSEHMKKF---YNHSMARRFALSEKRKS 562
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 503 LKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
++ K ++ +N+L+D+L K G +K+ +L + +KPD+ ++++ + +
Sbjct: 226 IRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDP 284
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL--GNVTSGPMEFMY 620
K+A + ++IE P Y C+ G +DEA L + G+ S P +
Sbjct: 285 KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 621 SLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+L ++ K++ AE+ ++ M+ GC P VI GMC ++EA K +
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 681 RKLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFFG 716
+ D + Y+ FL + + D LK +G
Sbjct: 405 KGY--PPDIVTYNCFLRVLCENRKTD---EALKLYG 435
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 106/265 (40%), Gaps = 4/265 (1%)
Query: 168 FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKF 227
F +C R+ + A +L E M G P + I AG +++ M K
Sbjct: 276 FGWCRVRDP--KKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG 333
Query: 228 GV--KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
P + ++ AL + + + G + T+ +++G+C A ++D
Sbjct: 334 SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVD 393
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E + L M K PD+ Y +R+L D L+++ M + R P V Y +I
Sbjct: 394 EAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLI 453
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
+ + + + EM + + D Y +++ ++ LL+++V+ G +
Sbjct: 454 SMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLK 513
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKL 430
++++ + L + + HK+
Sbjct: 514 LPYRVFDSFLMRLSEVGNLKAIHKV 538
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/356 (18%), Positives = 144/356 (40%), Gaps = 48/356 (13%)
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ +P++ A+ ++ L G V+EG L + M+ + D + L + V
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVK-PDANTFNVLFFGWCRVRDPKKA 287
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE---PDFLSVKPL 449
LL++++ +G++ + Y I+ C ++A LF I +G P + +
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
+V A+ + E ++L+ +M G + D++ + + +G MA
Sbjct: 348 IVALAKNDKAEECFELIGRMISTG--CLPDVSTYKDVI---EGMCMA------------- 389
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
KV E A DE++ PD +Y+ + + + +A + +
Sbjct: 390 ------------EKVDE---AYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 570 NKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM-----MLVRDCLGNVTSGPMEFMYSLTV 624
+++E C PS+ Y L ++ + D A M RDC+ +V + Y +
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVET------YCAMI 488
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ A++ +L E++ +G V + + + + G ++ KV ++++
Sbjct: 489 NGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 14/180 (7%)
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
+ +N+L +V + KKA+ L +E+ A KP++F+Y AI G + +A + +
Sbjct: 268 ANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFD 327
Query: 571 KII---EMSCIPSIAAYKCLTKGLCKIGEIDEAM-----MLVRDCLGNVTSGPMEFMYSL 622
+I P+ + + L K + +E M+ CL +V++ Y
Sbjct: 328 FMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST------YKD 381
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ C + ++ L+EM +G PP V + + +C+ +EA K++ + E +
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS 630
K I + P I A+ L LCK G + E L+R V P +++ C+
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRV--KPDANTFNVLFFGWCRV 281
Query: 631 NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
D +K + +L EM++ G P N A I C+ G ++EA +F
Sbjct: 282 RDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLF 326
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 10/347 (2%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K KG SYNA + + ++ A QL E PSE +++L+
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
+ +V E M K G R +YN + L + L+V + + T
Sbjct: 394 GKARNVLELMLRKEGAD-RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 274 LVKGLCQAGRIDEMLEVLGRMRE-KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE-MKK 331
++ GLC+ GR+D+ ++VL M K C PD ++ L+ QG + L V M +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
++++P V+AY +I GL + +E +F +++ D Y +++ NKV
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
D++ R D +Y ++GLC A G P+ + ++
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIA 632
Query: 452 LYAEAKRMENFYKLLQQMEKLG-------FPVIDDLARFFSIFVEKK 491
+ + Y++L++M K G + ++D L + VE++
Sbjct: 633 ECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMDLTVERE 679
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 186/454 (40%), Gaps = 58/454 (12%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ LC R+ + +++ MR + PDV +T L+ L+ +V++EM+
Sbjct: 168 LMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG 227
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKE----MKSKGHL-IDRAIYGSLVESFVAVNK 388
+ P+ + + +I G VE G L KE MK++ + A + +LV+S
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGY 287
Query: 389 VGAGFDLLKDL-VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
F++ +++ + + Y ++I+ LC + A ++ + +GL+P S
Sbjct: 288 FNDIFEIAENMSLCESVNVEFA-YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYN 346
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
++ + Y+LL++ + F
Sbjct: 347 AIIHGLCKDGGCMRAYQLLEEGSEFEF--------------------------------- 373
Query: 508 YVSVDIYNILMDSLHK---VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQ 564
+ S Y +LM+SL K G+ + L L GA+ + ++ + LC +D
Sbjct: 374 FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD-RTRIYNIYLRGLCVMD-----N 427
Query: 565 ACECHNKIIEM---SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
E N ++ M C P + GLCK+G +D+AM ++ D + P +
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 622 LTVIHACKSNDAEKVIGVLNEMM-QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
+ AE+ + VLN +M + PG V +AVI G+ K +EA VF L +
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 681 RKLLTESDT--IVYDEFLIDH---MKKKTADLVM 709
+ +S T I+ D + + M KK D V+
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 116/577 (20%), Positives = 239/577 (41%), Gaps = 42/577 (7%)
Query: 118 VTELSKLRRVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNH 177
VT+ + RR S+ A V+ NP + + +GY + + ++ + +
Sbjct: 51 VTDRAYWRRRIHSICA----VRRNPDEALRILD-GLCLRGYRPDSLNLSSVIHSLCDAGR 105
Query: 178 HRAADQLPELMDSQGKPPSEKQFEILIR--MHSDAG-RGLRVYHVYEKMRNKFGVKPRVF 234
A + L + G P E+ ++I ++S + L V H + +F P +
Sbjct: 106 FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEF--VPSLT 163
Query: 235 LYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRM 294
YNR+M+ L + A + D + G + VTF L+ G C+ ++ +V M
Sbjct: 164 NYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEM 223
Query: 295 REKLCRPDVFAYTVLVRILVPQGNLDGCLR----VWEEMKKDR-VEPDVMAYATIITGLS 349
R RP+ +VL+ + +++ + +WE MK + A+A ++ +
Sbjct: 224 RVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMC 283
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
G + + + + M + YG +++S + ++ + S G +
Sbjct: 284 REGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRT 343
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA-------KRMENF 462
YN +I GLC +A++L ++EG E +F + L E+ + N
Sbjct: 344 SYNAIIHGLCKDGGCMRAYQL----LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 463 YKLLQQMEKLGFPVIDDLARFFSIFVEK----KGPIMALEVFSYLKEKGYVSVDIY--NI 516
+L+ + E D R ++I++ P L V + + G D Y N
Sbjct: 400 LELMLRKEGA------DRTRIYNIYLRGLCVMDNPTEILNVLVSMLQ-GDCRPDEYTLNT 452
Query: 517 LMDSLHKVGEMKKALSLFDE-INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII-E 574
+++ L K+G + A+ + D+ + G PD+ + + + + G ++A + N+++ E
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 575 MSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAE 634
P + AY + +GL K+ + DEAM + L + Y++ + C +N +
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQ-LEKASVTADSTTYAIIIDGLCVTNKVD 571
Query: 635 KVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
++++ V +A + G+C+ G + +A
Sbjct: 572 MAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 182/466 (39%), Gaps = 68/466 (14%)
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
I + N D LR+ + + PD + +++I L + GR +E + F + G +
Sbjct: 64 ICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIP 123
Query: 372 DRAI-------------------------------------YGSLVESFVAVNKVGAGFD 394
D Y L+ + +V
Sbjct: 124 DERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHK 183
Query: 395 LLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYA 454
L+ D+ + G+ D+ + LI G C + + E AHK+F G+ P+ L++ L+ +
Sbjct: 184 LVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
Query: 455 EAKRMENFYKLLQQ------------MEKLGFP-VIDDLAR---FFSIFVEKKGPIMALE 498
+ + +E KL+++ M+ F ++D + R F IF E
Sbjct: 244 KMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIF----------E 293
Query: 499 VFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHV 557
+ + V+V+ Y ++DSL + A + + LKP SY+ I
Sbjct: 294 IAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLC 353
Query: 558 DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMML-VRDCLGNVTSGPM 616
G +A + + E PS YK L + LCK E+D V + +
Sbjct: 354 KDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK--ELDTGKARNVLELMLRKEGADR 411
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
+Y++ + C ++ +++ VL M+Q C P + VI+G+CK G +++A KV
Sbjct: 412 TRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLD 471
Query: 677 NLRERKLLTESDTIVYDEFLIDHMKKKTADLVMSGLKFFGLESKLK 722
++ K D + + + + + A+ + L E+K+K
Sbjct: 472 DMMTGKFCA-PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/466 (20%), Positives = 183/466 (39%), Gaps = 51/466 (10%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYH-VYEKMRNKFGVKPRVFLYNRIMDALIRT 246
M ++G P F LI + + R L V H V+++MR G++P + ++ ++
Sbjct: 188 MRNRGHLPDVVTFTTLIGGYCEI-RELEVAHKVFDEMR-VCGIRPNSLTLSVLIGGFLKM 245
Query: 247 GHLDLALSVYDDFKEDGLDEERVT-----FMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
++ + + E +E + F LV +C+ G +++ E+ M LC
Sbjct: 246 RDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM--SLCES 303
Query: 302 -DV-FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
+V FAY ++ L G R+ MK ++P +Y II GL G Y
Sbjct: 304 VNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ 363
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L +E Y L+ES G ++L+ ++ IYN + GLC
Sbjct: 364 LLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID- 478
++ + + +Q PD ++ ++ + R+++ K+L M F D
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDA 483
Query: 479 -DLARFFSIFVEKKGPIMALEVFSYLKEKGYV--SVDIYNILMDSLHKVGEMKKALSLFD 535
L + + AL+V + + + + V YN ++ L K+ + +A+S+F
Sbjct: 484 VTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFG 543
Query: 536 EINGANLKPDSFSYSIAI--LC---HVDL------------------------------G 560
++ A++ DS +Y+I I LC VD+ G
Sbjct: 544 QLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSG 603
Query: 561 EIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+ AC + + IP++ Y + + G EA ++ +
Sbjct: 604 YLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEE 649
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 6/267 (2%)
Query: 215 RVYHVYEKMR---NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
R + + E+M K GV+ Y+ I+ R + A+ ++ + GL + VT+
Sbjct: 200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
++ ++G+++E+L + R +PD A++VL ++ G+ DG V +EMK
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
V+P+V+ Y T++ + G+ LF EM G + +LV+ +
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE--PDFLSVKPL 449
L +++ + + D +YN L+ ++ E+A +LF ++E ++ PD S +
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFN-DMKESVQCRPDNFSYTAM 438
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPV 476
L +Y + E +L ++M K G V
Sbjct: 439 LNIYGSGGKAEKAMELFEEMLKAGVQV 465
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 113/272 (41%), Gaps = 39/272 (14%)
Query: 147 KFFHWAEK--QKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
K W E+ + G + +Y+A +++ L E + G P F +L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
+M +AG + +V ++M++ VKP V +YN +++A+ R G LA S++++ E GL
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKS-MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK--------------------------- 297
T LVK +A + L++ M+ K
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAER 417
Query: 298 ---------LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
CRPD F+YT ++ I G + + ++EEM K V+ +VM ++ L
Sbjct: 418 LFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
R+++ +F +G D + G L+
Sbjct: 478 GKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLL 509
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 142/331 (42%), Gaps = 17/331 (5%)
Query: 355 EEGYVLFKEMKSKGHL-IDRAIYGSLVESFVAVNKVGAGFDLLKDL----VSSGYRADLG 409
++ + F +KSK ++ Y ++S + G F L++++ V G D
Sbjct: 167 QKTHTFFNWVKSKSLFPMETIFYNVTMKSL----RFGRQFQLIEEMALEMVKDGVELDNI 222
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
Y+ +I N + KA + F+ + GL PD ++ +L +Y+++ ++E L ++
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 470 EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSY-LKEKGYVSVD----IYNILMDSLHKV 524
G+ D +A FS+ + G + Y L+E + V +YN L++++ +
Sbjct: 283 VATGWKP-DAIA--FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
G+ A SLF+E+ A L P+ + + + + + A + ++ Y
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMM 644
L IG +EA L D +V P F Y+ + AEK + + EM+
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Query: 645 QQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+ G + C+ ++ + K I++ VF
Sbjct: 460 KAGVQVNVMGCTCLVQCLGKAKRIDDVVYVF 490
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 177/409 (43%), Gaps = 47/409 (11%)
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
A + + LE+ + ++ + +V+ ++ LV G LD C++++++MK+D ++PDV+
Sbjct: 144 AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVT 203
Query: 341 YATIITGLSNGGRVEEGYV----LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL 396
Y T++ G +V+ GY L E+ G +D +YG+++ + + + +
Sbjct: 204 YNTLLAGCI---KVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFI 260
Query: 397 KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA 456
+ + G+ ++ Y++L+ ++KA +L GL P+ + + LL +Y +
Sbjct: 261 QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKG 320
Query: 457 KRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
+ +LL ++E G + E + P Y +
Sbjct: 321 GLFDRSRELLSELESAG-------------YAENEMP--------------------YCM 347
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI--LCHVD-LGEIKQACECHNKII 573
LMD L K G++++A S+FD++ G ++ D ++ SI I LC E K+
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
E + + C C+ GE++ M +++ + P + + + + K
Sbjct: 408 EKCDLVMLNTMLC---AYCRAGEMESVMRMMKK-MDEQAVSPDYNTFHILIKYFIKEKLH 463
Query: 634 EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+M +G +CS++I + K EA V++ LR K
Sbjct: 464 LLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYNMLRYSK 512
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 157/359 (43%), Gaps = 39/359 (10%)
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ +Y+ + ++ K V++ N I+ L++ G LD + ++D K DGL + VT+ L
Sbjct: 149 KALEIYQSIPDE-STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTL 207
Query: 275 VKGLCQAGR-IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
+ G + + +E++G + + D Y ++ I G + ++MK +
Sbjct: 208 LAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEG 267
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
P++ Y++++ S G ++ L EMKS G + ++ + +L++ ++
Sbjct: 268 HSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSR 327
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP------------ 441
+LL +L S+GY + Y L++GL K E+A +F +G+
Sbjct: 328 ELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISAL 387
Query: 442 -----------------------DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVI 477
D + + +L Y A ME+ +++++M++ P
Sbjct: 388 CRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFD 535
+ F+++K ++A + + KG+ + ++ + L+ L K+ +A S+++
Sbjct: 448 NTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVYN 506
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 1/242 (0%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRG 213
K +G+ N Y++ + ++ AD+L M S G P++ L++++ G
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
R + ++ + G Y +MD L + G L+ A S++DD K G+ + +
Sbjct: 324 DRSRELLSELESA-GYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSI 382
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ LC++ R E E+ + D+ ++ G ++ +R+ ++M +
Sbjct: 383 MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQA 442
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
V PD + +I Y +M SKGH ++ + SL+ + F
Sbjct: 443 VSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAF 502
Query: 394 DL 395
+
Sbjct: 503 SV 504
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 147/347 (42%), Gaps = 16/347 (4%)
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
GR ++ LF+ M+ G I + Y S ++ FV V ++ + + + ++ I
Sbjct: 111 SGRWQDLIQLFEWMQQHGK-ISVSTYSSCIK-FVGAKNVSKALEIYQSIPDESTKINVYI 168
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY----KLL 466
N+++ L K + KLF ++GL+PD ++ LL A +++N Y +L+
Sbjct: 169 CNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL---AGCIKVKNGYPKAIELI 225
Query: 467 QQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVF-SYLKEKGYV-SVDIYNILMDSLHKV 524
++ G + + G E F +K +G+ ++ Y+ L++S
Sbjct: 226 GELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWK 285
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
G+ KKA L E+ L P+ + + ++ G ++ E +++ + Y
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSN--DAEKVIGVLNE 642
L GL K G+++EA + D G + S+ + C+S K + +E
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSD-GYANSIMISALCRSKRFKEAKELSRDSE 404
Query: 643 MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ C V+ + ++ C+ G +E ++ + E+ + + +T
Sbjct: 405 TTYEKCDL--VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 55/382 (14%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G K +N +++A +G+++ A+ KE GL+ T+ L+KG AG+ +
Sbjct: 110 GTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERS 169
Query: 288 LEVLGRMREKL---CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
E+L M E+ P++ + VLV+ + ++ V ++M++ V PD + Y TI
Sbjct: 170 SELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 345 ITGLSNGG---RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
T G R E V MK K R G +V + +V G ++ +
Sbjct: 230 ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTC-GIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
A+L ++N+LI G +V ++G+ D +++ LL+ + E
Sbjct: 289 MRVEANLVVFNSLING------------FVEVMDRDGI--DEVTLTLLLMSFNE------ 328
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMD 519
++E +G M ++V + +KE V D+ Y+ +M+
Sbjct: 329 ------EVELVG------------------NQKMKVQVLTLMKECN-VKADVITYSTVMN 363
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ G M+KA +F E+ A +KPD+ +YSI +V E K+A E +I + P
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRP 422
Query: 580 SIAAYKCLTKGLCKIGEIDEAM 601
++ + + G C G +D+AM
Sbjct: 423 NVVIFTTVISGWCSNGSMDDAM 444
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 148/351 (42%), Gaps = 34/351 (9%)
Query: 154 KQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGK---PPSEKQFEILIRMHSDA 210
K+ G + ++YN + +L +LM +G P+ + F +L++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDD---FKEDGLDEE 267
+ + V +KM + GV+P YN I ++ G A S + KE
Sbjct: 202 KKVEEAWEVVKKME-ECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 268 RVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC----- 322
R T ++V G C+ GR+ + L + RM+E ++ + L+ V + DG
Sbjct: 261 R-TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTL 319
Query: 323 --------------------LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
++V MK+ V+ DV+ Y+T++ S+ G +E+ +FK
Sbjct: 320 TLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 379
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EM G D Y L + +V + +LL+ L+ R ++ I+ +I G C+
Sbjct: 380 EMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNG 438
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLG 473
+ A ++F + G+ P+ + + L+ Y E K+ ++LQ M G
Sbjct: 439 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 489
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 165/413 (39%), Gaps = 42/413 (10%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
L+ L + GR E V + E RP + +YT L+ + Q + E+++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ D + + +I S G +E+ +MK G + Y +L++ + K
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 394 DLLKDLVSSGYRADLG----IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
+LL ++ G D+G +N L++ C K E+A ++ + + G+ PD ++ +
Sbjct: 171 ELLDLMLEEG-NVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 450 LVLY---AEAKRMENFYKLLQQM----------EKLGFPV--------IDDLARFFSIFV 488
Y E R E+ +++++M G V + D RF
Sbjct: 230 ATCYVQKGETVRAES--EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 489 EKKGPIMALEVFSYL--------KEKGYVSVDIYNILM---DSLHKVGEMKKALSLFDEI 537
E + L VF+ L G V + +LM + + VG K + + +
Sbjct: 288 EMRVE-ANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLM 346
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEI 597
N+K D +YS + G +++A + ++++ P AY L KG + E
Sbjct: 347 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 406
Query: 598 DEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
+A L+ + V S P +++ + C + + + V N+M + G P
Sbjct: 407 KKAEELLETLI--VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP 457
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 146/397 (36%), Gaps = 75/397 (18%)
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
GR E +FK + GH Y +L+ + + G+ ++ ++ SG + D +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
N +I E A + + GL P + L+ Y A + E +LL M +
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLE 178
Query: 472 LGFPVIDDLARFFSIFVE----KKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGE 526
G + R F++ V+ KK A EV ++E G + YN + + GE
Sbjct: 179 EGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
Query: 527 MKKALSLFDE--INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
+A S E + KP+ + I + + G ++ ++ EM ++ +
Sbjct: 239 TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVF 298
Query: 585 KCLTKGLCKIGEID----------------------------EAMMLVRDCLGNVTSGPM 616
L G ++ + D + + L+++C NV + +
Sbjct: 299 NSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKEC--NVKADVI 356
Query: 617 EFMYSLTVIHACKSND-AEKVIGVLNEMMQQGCPPGN----------------------- 652
+ TV++A S EK V EM++ G P
Sbjct: 357 TYS---TVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL 413
Query: 653 -----------VVCSAVISGMCKYGTIEEARKVFSNL 678
V+ + VISG C G++++A +VF+ +
Sbjct: 414 ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM 450
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 30/317 (9%)
Query: 126 RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
R TP +A+ + ++ +P L F F+WA +Q + H SY+ + ++ D +
Sbjct: 136 RFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIV 195
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM--RNKFGVKPRVFLYNRIMDAL 243
+ S +E + +I + AG+ +R +++ M +P + Y+ + AL
Sbjct: 196 NQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKAL 255
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
+ G+ VY + T L + + +G PDV
Sbjct: 256 LGRGNNSYINHVYME-----------TVRSLFRQMVDSG----------------IEPDV 288
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKD-RVEPDVMAYATIITGLSNGGRVEEGYVLFK 362
FA LV+ V +++ LR++ +M EP+ Y +I GL GR L
Sbjct: 289 FALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLS 348
Query: 363 EMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLN 422
EMK KG + + Y SLV +F ++ L +++ +G D Y L++ C
Sbjct: 349 EMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKG 408
Query: 423 KFEKAHKLFQVTIQEGL 439
K+++A +L ++ ++ L
Sbjct: 409 KYDEATRLLEMLREKQL 425
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 140/298 (46%), Gaps = 14/298 (4%)
Query: 147 KFFHWAEK---QKGYHHNFASYNAFAYCMNR-------NNHHRAADQLPELMDSQGKPPS 196
K F W E+ ++ + N + A +N N + D++PE + +
Sbjct: 85 KKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE----RNCKRT 140
Query: 197 EKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVY 256
F L+ ++ + V +++++ K ++P V YN ++ L G A+++
Sbjct: 141 ALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALI 200
Query: 257 DDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQ 316
D+ + GL + +TF +L+ G+ +E ++ RM EK + D+ +Y + L +
Sbjct: 201 DEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAME 260
Query: 317 GNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIY 376
+ + +++++K + ++PDV + +I G + G+++E +KE++ G + ++
Sbjct: 261 NKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVF 320
Query: 377 GSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
SL+ + + + ++L K++ + D + +++ L +K ++A ++ ++
Sbjct: 321 NSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELA 378
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 134/348 (38%), Gaps = 50/348 (14%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
R ++ Y VR L + + EE K A II G E
Sbjct: 68 RKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQK 127
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS-----GYRADLGIYNNL 414
+F EM + + +L+ + V K FDL++ + D+ YN L
Sbjct: 128 VFDEMPERNCKRTALSFNALLNACVNSKK----FDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
I+GLC F +A L +GL+PD ++ LL + E ++ +M
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM----- 238
Query: 475 PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALS 532
VEK V DI YN + L + ++ +S
Sbjct: 239 -------------VEKN-----------------VKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
LFD++ G LKPD F+++ I V G++ +A + +I + C P + L +C
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 593 KIGEIDEAMMLVRDCLGN---VTSGPMEFMYSLTVIHACKSNDAEKVI 637
K G+++ A L ++ V ++ + ++ K ++AE+++
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVD-ALVKGSKQDEAEEIV 375
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 10/289 (3%)
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLS---VKPLLVLYAEAKRME 460
+R ++ +Y + L KFE ++ + ++ P+ V ++ LY E
Sbjct: 67 FRKNIAVYERTVRRLAAAKKFEWVEEILE---EQNKYPNMSKEGFVARIINLYGRVGMFE 123
Query: 461 NFYKLLQQM-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNIL 517
N K+ +M E+ + V K + +F L K + D+ YN L
Sbjct: 124 NAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTL 183
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+ L G +A++L DEI LKPD +++I + G+ ++ + +++E +
Sbjct: 184 IKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNV 243
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVI 637
I +Y GL + +E + L GN P F ++ + ++ I
Sbjct: 244 KRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELK-PDVFTFTAMIKGFVSEGKLDEAI 302
Query: 638 GVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
E+ + GC P V ++++ +CK G +E A ++ + ++LL +
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 1/195 (0%)
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK-KDRVEPDV 338
+ G + +V M E+ C+ ++ L+ V D +++E+ K +EPDV
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
+Y T+I GL G E L E+++KG D + L+ K G +
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
+V + D+ YN + GL NK E+ LF L+PD + ++ + +
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 459 MENFYKLLQQMEKLG 473
++ +++EK G
Sbjct: 298 LDEAITWYKEIEKNG 312
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 117/271 (43%), Gaps = 2/271 (0%)
Query: 200 FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDF 259
+E +R + A + V + E+ +NK+ + RI++ R G + A V+D+
Sbjct: 74 YERTVRRLAAAKKFEWVEEILEE-QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEM 132
Query: 260 KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC-RPDVFAYTVLVRILVPQGN 318
E ++F L+ + + D + + + KL PDV +Y L++ L +G+
Sbjct: 133 PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGS 192
Query: 319 LDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGS 378
+ + +E++ ++PD + + ++ G+ EEG ++ M K D Y +
Sbjct: 193 FTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNA 252
Query: 379 LVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
+ NK L L + + D+ + +I+G + K ++A ++ + G
Sbjct: 253 RLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNG 312
Query: 439 LEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
P LL +A +E+ Y+L +++
Sbjct: 313 CRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
+ ASYN + A L + ++++G P F IL+ G+ ++
Sbjct: 176 DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIW 235
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+M K VK + YN + L + +S++D K + L + TF ++KG
Sbjct: 236 ARMVEK-NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G++DE + + + CRP F + L+ + G+L+ + +E+ R+ D
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
++ L G + +E + + K+ +L
Sbjct: 355 LQEVVDALVKGSKQDEAEEIVELAKTNDYL 384
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 168 FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKF 227
+ Y + H+ D++PEL + + K F L+ + ++ + ++++ K
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCER----TVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ P + YN ++ AL R G +D LS++++ +++G + + ++F L++ + E
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+ M+ K P++ +Y VR L L + + MK + + PDV Y +IT
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
+EE + EMK KG D Y L+ + ++ ++ + +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQ 432
+Y ++E L K ++A +L +
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVK 392
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 1/209 (0%)
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
RIM +G + A ++D+ E + +F L+ + ++DE ++ + EK
Sbjct: 127 RIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 298 L-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
L PD+ Y +++ L +G++D L ++EE++K+ EPD++++ T++ E
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVE 246
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
G ++ MKSK + Y S V K +L+ + + G D+ YN LI
Sbjct: 247 GDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALIT 306
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLS 445
N E+ K + ++GL PD ++
Sbjct: 307 AYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 130/284 (45%), Gaps = 18/284 (6%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR---MHSDAGRGLRVYHVYE 221
Y+AF + R + + E++ Q K K + +IR ++ +G + +++
Sbjct: 90 YSAF---IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFD 146
Query: 222 KMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQ 280
+M + + V +N ++ A + + LD A+ + + E G+ + VT+ ++K LC+
Sbjct: 147 EMP-ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR 205
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLV-----RILVPQGNLDGCLRVWEEMKKDRVE 335
G +D++L + + + PD+ ++ L+ R L +G+ R+W+ MK +
Sbjct: 206 KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD-----RIWDLMKSKNLS 260
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P++ +Y + + GL+ + + L MK++G D Y +L+ ++ N +
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKC 320
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
++ G D Y LI LC ++A ++ + I+ L
Sbjct: 321 YNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 128/290 (44%), Gaps = 8/290 (2%)
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKL--FQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
S +R G+Y+ I L KF ++ +Q + DF V +++LY +
Sbjct: 80 SESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDF--VIRIMLLYGYSGM 137
Query: 459 MENFYKLLQQMEKLGFP-VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YN 515
E+ +KL +M +L + S +V K A++ F L EK ++ D+ YN
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
++ +L + G M LS+F+E+ +PD S++ + + + +
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
+ P+I +Y +GL + + +A+ L+ D + P Y+ + N+ E+
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLI-DVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 636 VIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
V+ NEM ++G P V +I +CK G ++ A +V + KLL+
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS 366
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 126/312 (40%), Gaps = 19/312 (6%)
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKK--DRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
Y+ +R L V + KK D D + ++ G S G E + LF E
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFDE 147
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS-GYRADLGIYNNLIEGLCNLN 422
M + +L+ ++V K+ K+L G DL YN +I+ LC
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 423 KFEKAHKLFQVTIQEGLEPDFLSVKPLLV------LYAEAKRMENFYKLLQQMEKLGFPV 476
+ +F+ + G EPD +S LL L+ E R+ + K K P
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK-----SKNLSPN 262
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLF 534
I K AL + +K +G +S D+ YN L+ + +++ + +
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEG-ISPDVHTYNALITAYRVDNNLEEVMKCY 321
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
+E+ L PD+ +Y + I G++ +A E + I+ + YK + + L
Sbjct: 322 NEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGA 381
Query: 595 GEIDEAMMLVRD 606
G+IDEA LV++
Sbjct: 382 GKIDEATQLVKN 393
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 1/221 (0%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ K F ++ G + +YN + R + E ++ G P F L+
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL 235
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
+ +++ M++K + P + YN + L R AL++ D K +G+
Sbjct: 236 EEFYRRELFVEGDRIWDLMKSK-NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGI 294
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
+ T+ L+ ++E+++ M+EK PD Y +L+ +L +G+LD +
Sbjct: 295 SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVE 354
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
V EE K ++ Y ++ L G+++E L K K
Sbjct: 355 VSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 159/362 (43%), Gaps = 27/362 (7%)
Query: 127 VTPSLVAEVLK----VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
++ L+ VLK NP + +F+ +A +G++H+ S + Y + RN R D
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRN---RKFD 125
Query: 183 QLPELMDSQGKPP----SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRV--FLY 236
Q+ EL+ + S + ++++ GR ++ V + + + + K V F
Sbjct: 126 QIWELLIETKRKDRSLISPRTMQVVL------GRVAKLCSVRQTVESFWKFKRLVPDFFD 179
Query: 237 NRIMDALIRT----GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
+AL+RT + A +VY K + TF +L+ G +E
Sbjct: 180 TACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFFE 235
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
M+ K +PDV Y L+ + ++ ++ ++M+++ PDV+ Y T+I GL G
Sbjct: 236 EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
+ ++ + KEMK G D A Y + + +F ++G L+ ++V G + YN
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 413 NLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL 472
L N ++ +L+ + P+ S L+ ++ ++++ +L + M
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVK 415
Query: 473 GF 474
GF
Sbjct: 416 GF 417
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+KP V YN ++D + ++ A + D +E+ + +T+ ++ GL G+ D+
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
EVL M+E C PDV AY +R L ++ +EM K + P+ Y
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
LS + + L+ M L + L++ F KV L +D+V G+ +
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ + L++ LC+L K E+A K +++G P +S K + +L A + + L+Q
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQ 480
Query: 468 QM 469
+M
Sbjct: 481 KM 482
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 23/361 (6%)
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEM----KKDR--VEPDVMAYAT-IITGLSNGGRVEE 356
F+ ++ IL D ++WE + +KDR + P M + L + + E
Sbjct: 109 FSLDTMLYILGRNRKFD---QIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVE 165
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
+ FK + D A + +L+ + + ++ L ++ DL +N L+
Sbjct: 166 SFWKFKRLVPD--FFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLS 222
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFP 475
G + + E + + +GL+PD ++ L+ +Y + + +E YKL+ +M E+ P
Sbjct: 223 GWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETP 279
Query: 476 VIDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLF 534
+ P A EV +KE G Y V YN + + + A L
Sbjct: 280 DVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLV 339
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
DE+ L P++ +Y++ ++ ++ E + +++ C+P+ + L K +
Sbjct: 340 DEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH 399
Query: 595 GEIDEAMMLVRDCL--GNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGN 652
++D AM L D + G + + + + K +AEK L EM+++G P N
Sbjct: 400 EKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEK---CLLEMVEKGHRPSN 456
Query: 653 V 653
V
Sbjct: 457 V 457
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 208/471 (44%), Gaps = 29/471 (6%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
KFG V + ++D ++ + V+D+ KE + VT+ L+ G + D
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV----VTWTTLISGYARNSMND 176
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E+L + RM+ + +P+ F + + +L +G L+V + K+ ++ + ++I
Sbjct: 177 EVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLI 236
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYR 405
G V + +LF + + K + ++ + + + +G + + + V R
Sbjct: 237 NLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV----R 292
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL 465
+ ++I+ NL + +L ++ G D L+V Y++ M + +L
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 466 LQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKV 524
+++ +G V S F++ G A+++FS +K KG + Y++++ +L +
Sbjct: 353 FKEIGCVGNVV--SWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 525 GEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAY 584
+ + ++ N + S + + +V LG++++A + + I + I A+
Sbjct: 411 SPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD----KDIVAW 462
Query: 585 KCLTKGLCKIGEIDEAMMLVRDCLGNVTSG---PMEFMYSLTVIHACKSNDAEKVIG--V 639
+ G + GE + A+ + G +T G P EF +S ++++ C + +A G
Sbjct: 463 SAMLAGYAQTGETEAAIKM----FGELTKGGIKPNEFTFS-SILNVCAATNASMGQGKQF 517
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTI 690
++ V SA+++ K G IE A +VF RE+ L++ + I
Sbjct: 518 HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 179/436 (41%), Gaps = 73/436 (16%)
Query: 128 TPSLVAEV-LKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPE 186
TPS +E+ L ++ NP LS +FF + + H+ S + + ++R+ A ++
Sbjct: 70 TPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIR 129
Query: 187 LMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
L L D R L+V+ K N+ G P F+++ ++ + + +
Sbjct: 130 LALR------------LAATDEDEDRVLKVFRSLIKSYNRCGSAP--FVFDLLIKSCLDS 175
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ-------------------------- 280
+D A+ V + G++ + T L+ + +
Sbjct: 176 KEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAK 235
Query: 281 --AGRI-------------------DEMLEVLGR-MREKL-CRPDVFAYTVLVRILVPQG 317
G+I EM+E + R M E++ C P+V++Y VL+ +G
Sbjct: 236 KMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG 295
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
+ +VWEEMK V D++AY T+I GL + V + LF++M KG Y
Sbjct: 296 LMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYE 355
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK---AHKLFQVT 434
LV + V +G + +++ G+ AD L+EGLC+ ++ A + +
Sbjct: 356 HLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDA 415
Query: 435 IQEGL-EPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFF-----SIFV 488
++E + P + L+ E +M+ + +M GF + R F +
Sbjct: 416 VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Query: 489 EKKGPIMALEVFSYLK 504
E+ ++A+E+ LK
Sbjct: 476 EETSALLAIEMAESLK 491
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 178/424 (41%), Gaps = 55/424 (12%)
Query: 132 VAEVLKVQTNPTL-SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDS 190
V E L +N + +FF+W E++ G+ H ++N + + + L M
Sbjct: 50 VCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIG 109
Query: 191 QGKP-PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHL 249
+ P+ F I+ + + A Y+K+ + F ++ YN ++DAL H+
Sbjct: 110 NTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL-DDFNLRDETSFYN-LVDALCEHKHV 167
Query: 250 DLA--LSVYDDFKEDGLDEERVTFMVLV-KGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
A L + +G L+ +G + G + E +M + D+F+Y
Sbjct: 168 VEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSY 227
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
++ + I+ G +++++EMK R++ DV+AY T+I + VE G +F+EM+
Sbjct: 228 SIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE 287
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK 426
+G + A + ++++ ++ + +L ++ G + D Y +C ++ EK
Sbjct: 288 RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY------MCLFSRLEK 341
Query: 427 AHK---LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF--PVIDDLA 481
+ LF I+ G+ P +M+ + L+++ E+ GF PV
Sbjct: 342 PSEILSLFGRMIRSGVRP----------------KMDTYVMLMRKFERWGFLQPV----- 380
Query: 482 RFFSIFVEKKGPIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGA 540
L V+ +KE G YN ++D+L + G + A +E+
Sbjct: 381 ---------------LYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
Query: 541 NLKP 544
L P
Sbjct: 426 GLSP 429
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 10/336 (2%)
Query: 120 ELSKLRRVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHH 178
E+ K ++ LV ++L + + + + WAE KG+ H+ +Y+ + +
Sbjct: 78 EICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKA--- 134
Query: 179 RAADQLPELMDSQ--GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLY 236
+ D++ E ++ K + ++R + AG +++++ +FG++
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL-GEFGLEKNTESM 193
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N ++D L + ++ A V K + TF + + G C+A R++E L + M+
Sbjct: 194 NLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
RP V +YT ++R Q + EM+ + P+ + Y TI++ L+ EE
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK-DLVSSGYRADLGIYNNLI 415
+ MK G D Y L+ + ++ + + ++ G + YN++I
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGL-EPDFLSVKPLL 450
C+ ++ +KA +L + L PD + +PLL
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 158/387 (40%), Gaps = 14/387 (3%)
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
AY + V IL D E M+ D++ + A I+ + G EE +F +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
G + L+++ +V +L L S + +N I G C N+
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRV 240
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID-DLARF 483
E+A Q G P +S ++ Y + Y++L +ME G P
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 484 FSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFD----EIN 538
S +K AL V + +K G + YN L+ +L + G +++A +F E+
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL- 359
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS--CIPSIAAYKCLTKGLCKIGE 596
G ++ +++ IA+ CH D E +A E K +E S C P + Y+ L + K G+
Sbjct: 360 GVSINTSTYNSMIAMYCHHD--EEDKAIELL-KEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
+ E L+++ + E Y+ + C++N E + EM+ Q P + C
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Query: 657 AVISGMCKYGTIEEARKVFSNLRERKL 683
++ + K E A ++ ++ KL
Sbjct: 477 LLLEEVKKKNMHESAERIEHIMKTVKL 503
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 10/336 (2%)
Query: 120 ELSKLRRVTPSLVAEVL-KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHH 178
E+ K ++ LV ++L + + + + WAE KG+ H+ +Y+ + +
Sbjct: 78 EICKRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKA--- 134
Query: 179 RAADQLPELMDSQ--GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLY 236
+ D++ E ++ K + ++R + AG +++++ +FG++
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL-GEFGLEKNTESM 193
Query: 237 NRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE 296
N ++D L + ++ A V K + TF + + G C+A R++E L + M+
Sbjct: 194 NLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG 252
Query: 297 KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
RP V +YT ++R Q + EM+ + P+ + Y TI++ L+ EE
Sbjct: 253 HGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEE 312
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK-DLVSSGYRADLGIYNNLI 415
+ MK G D Y L+ + ++ + + ++ G + YN++I
Sbjct: 313 ALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
Query: 416 EGLCNLNKFEKAHKLFQVTIQEGL-EPDFLSVKPLL 450
C+ ++ +KA +L + L PD + +PLL
Sbjct: 373 AMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLL 408
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 158/387 (40%), Gaps = 14/387 (3%)
Query: 305 AYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
AY + V IL D E M+ D++ + A I+ + G EE +F +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
G + L+++ +V +L L S + +N I G C N+
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRV 240
Query: 425 EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVID-DLARF 483
E+A Q G P +S ++ Y + Y++L +ME G P
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 484 FSIFVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFD----EIN 538
S +K AL V + +K G + YN L+ +L + G +++A +F E+
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPEL- 359
Query: 539 GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS--CIPSIAAYKCLTKGLCKIGE 596
G ++ +++ IA+ CH D E +A E K +E S C P + Y+ L + K G+
Sbjct: 360 GVSINTSTYNSMIAMYCHHD--EEDKAIELL-KEMESSNLCNPDVHTYQPLLRSCFKRGD 416
Query: 597 IDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCS 656
+ E L+++ + E Y+ + C++N E + EM+ Q P + C
Sbjct: 417 VVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCL 476
Query: 657 AVISGMCKYGTIEEARKVFSNLRERKL 683
++ + K E A ++ ++ KL
Sbjct: 477 LLLEEVKKKNMHESAERIEHIMKTVKL 503
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 138/296 (46%), Gaps = 12/296 (4%)
Query: 187 LMDSQGKPPSEKQ---FEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDAL 243
L++S P K+ + LIR + A +E+M +++G +N +++A
Sbjct: 89 LIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQM-DQYGTPRSAVSFNALLNAC 147
Query: 244 IRTGHLDLALSVYDDFKE--DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP 301
+ + + D ++D+ + + + +++++ +L+K C +G ++ +E++ +M+ K
Sbjct: 148 LHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEV 207
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG--RVEEGYV 359
A+T ++ L +G L+ +W EM K E D AY I RV+E
Sbjct: 208 TTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKE--- 264
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
L +EM S G D Y L+ ++ + + + L + + + LI LC
Sbjct: 265 LIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFP 475
+E+ + +F+ ++ PDF ++K L+V E K+ ++ L++ ++K FP
Sbjct: 325 YSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKK-KFP 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 121/281 (43%), Gaps = 11/281 (3%)
Query: 320 DGCLRVWEEMKKDRVEPDVMAYATIIT--GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
D L+++ + P YA +T L+ R + L + K+ + + Y
Sbjct: 47 DKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYS 106
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQE 437
+L+ S+ + + + G +N L+ + F+K +LF Q
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR 166
Query: 438 --GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE--KKGP 493
+ PD +S L+ Y ++ E ++++QM+ G V F +I KKG
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVT--TIAFTTILSSLYKKGE 224
Query: 494 I-MALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
+ +A +++ + +KG + YN+ + S K ++ L +E++ LKPD+ SY+
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
+ + + G + +A + + + +C P+ A ++ L LC
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 483 FFSIFVEKKGPIM----ALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEI 537
F+S + G A+ F + + G S +N L+++ K LFDEI
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 538 NGANLK--PDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG 595
K PD SY I I + D G ++A E ++ + A+ + L K G
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 596 EIDEA-----MMLVRDC-LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
E++ A M+ + C L N Y++ ++ A K + E+V ++ EM G
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAA-------YNVRIMSAQKES-PERVKELIEEMSSMGLK 275
Query: 650 PGNVVCSAVISGMCKYGTIEEARKVFSNL 678
P + + +++ C+ G ++EA+KV+ L
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGL 304
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 122/304 (40%), Gaps = 40/304 (13%)
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
Y+ L+R + +R +E+M + +++ ++ + ++ LF E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 366 SKGHLI--DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
+ + I D+ YG L++S+ ++++ + G + ++ L +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
E A L+ +++G E D + + ++ A+ + E +L+++M +G D ++
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYN-VRIMSAQKESPERVKELIEEMSSMGLKP-DTIS-- 280
Query: 484 FSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLK 543
YN LM + + G + +A +++ + G N
Sbjct: 281 ------------------------------YNYLMTAYCERGMLDEAKKVYEGLEGNNCA 310
Query: 544 PDSFSYSIAI--LCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAM 601
P++ ++ I LC+ L E Q K + M IP K L GL + + D+A
Sbjct: 311 PNAATFRTLIFHLCYSRLYE--QGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 368
Query: 602 MLVR 605
L+R
Sbjct: 369 GLIR 372
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 180/418 (43%), Gaps = 54/418 (12%)
Query: 223 MRNKFGVKP----RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
+R+ + KP ++F N+I+ +R+G +D AL V+ + + +T+ L+ G+
Sbjct: 47 VRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGI 102
Query: 279 CQ-AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
+ R+ E ++ + E PD F+Y +++ V N + ++ M D
Sbjct: 103 SKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----D 154
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI---------------------- 375
++ T+ITG + G +E+ LF M K + A+
Sbjct: 155 AASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPV 214
Query: 376 -----YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ +++ ++ KV + KD+ + +L +N +I G ++ E KL
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSRPEDGLKL 271
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVE 489
F+ ++EG+ P+ + L+ +E ++ ++ Q + K + L S++ +
Sbjct: 272 FRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCK 331
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
A ++F +K+K V+ +N ++ + G KAL LF E+ ++PD ++
Sbjct: 332 CGELGDAWKLFEVMKKKDVVA---WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 550 SIAILC--HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
+L H L I A + + + P Y C+ L + G+++EA+ L+R
Sbjct: 389 VAVLLACNHAGLVNIGMA-YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIR 445
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 134/691 (19%), Positives = 245/691 (35%), Gaps = 138/691 (19%)
Query: 121 LSKLR-RVTPSLVAEVLK-VQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHH 178
LS LR R+T V +VL + + KFF WA +Q G+HH A+++A +
Sbjct: 103 LSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKIL------ 156
Query: 179 RAADQLPELMDSQGKP-------PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
R A + ++D + S + + L+ ++ AGR + MR + G+
Sbjct: 157 RGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFR-GLDL 215
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV- 290
F Y+ +++AL+ D ++D G VT +LVK C+ G++DE +
Sbjct: 216 DSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCA-VTHSILVKKFCKQGKLDEAEDYL 274
Query: 291 --------------LGRMREKLCRPDVF--------------------AYTVLVRILVPQ 316
LG + + LC F AY + +R L+
Sbjct: 275 RALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKA 334
Query: 317 G------------------------------------NLDGCLRVWEEMKKDRVEPDVMA 340
G NLDG + EM V P+
Sbjct: 335 GFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT 394
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+ G V+E L++ G Y L+ + A V +D+LK +
Sbjct: 395 MNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAI 454
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G+ ++ L LC K + A +L + L P ++ ++ + ++E
Sbjct: 455 DRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVE 514
Query: 461 NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM----ALEVFSYLKEKGYV------- 509
+ + + K G +D + F+ + +M A ++ ++EKGY
Sbjct: 515 DALMINELFNKSG---VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYR 571
Query: 510 ------------------------------SVDIYNILMDSLHKVGEMKKALSLFDEING 539
V YN+ ++ G+ K A ++D ++
Sbjct: 572 NVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDR 631
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE 599
+ P S + + ++ +I A + + E Y+ + GLCK ++D+
Sbjct: 632 DGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDD 690
Query: 600 AMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG----CPPGNVVC 655
AM + + G +E Y + + C ++ +G++NE + G GNV+
Sbjct: 691 AMHFLEEMKGEGLQPSIE-CYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLL 749
Query: 656 SAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
+ Y R + + E K L E
Sbjct: 750 HNAMKSKGVYEAWTRMRNIEDKIPEMKSLGE 780
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/519 (19%), Positives = 203/519 (39%), Gaps = 84/519 (16%)
Query: 227 FGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDE 286
FG +PR + NR++D ++ L+ A ++D+ E +++ +V G C +G I
Sbjct: 43 FGFQPRAHILNRLIDVYCKSSELNYARQLFDEISE----PDKIARTTMVSGYCASGDITL 98
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIIT 346
V + +C D Y ++ + + ++ +MK + +PD +A+++
Sbjct: 99 ARGVF--EKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 347 GLSNGGRVEEGYVLF--KEMKSKGHLIDR------AIYGSLVESFVAVNKVGAGFD---- 394
GL+ E+ V F +KS I ++Y S ++ FD
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE 216
Query: 395 --------LLKDLVSSGYRADLG--------------IYNNLIEGLCNLNKFEKAHKLFQ 432
++ V +GY DLG YN +I G N +++A ++ +
Sbjct: 217 KDERSWTTMMTGYVKNGY-FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 433 VTIQEGLEPDFLSVKPLLVLYAEAKRME---NFYKLLQQMEKLGFPVIDDLARFF----- 484
+ G+E D + ++ A A ++ + + + E F + L +
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGK 335
Query: 485 -----------------------SIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSL 521
S +V A +F +KEK +S + I++ L
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS---WMIMISGL 392
Query: 522 HKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSI 581
+ G ++ L LF + +P +++S AI LG + H +++++ S+
Sbjct: 393 AENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSL 452
Query: 582 AAYKCLTKGLCKIGEIDEAMMLVRD--CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
+A L K G ++EA + R CL +V+ ++ + + + + V
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-------WNALIAALGQHGHGAEAVDV 505
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
EM+++G P + V++ G +++ RK F ++
Sbjct: 506 YEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 202/501 (40%), Gaps = 44/501 (8%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEER--VTFMVLVKGLCQAGRIDEMLEVLGR 293
+ +M ++ G+ DL + + G+D+ V + ++ G G E LE++ R
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLE-----GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRR 276
Query: 294 MREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGR 353
M D F Y ++R G L +V + + R + ++++ G+
Sbjct: 277 MVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGK 335
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
+E +F++M +K D + +L+ +V+ +G + K++ ++ +
Sbjct: 336 FDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMI 387
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEP-DFL---SVKPLLVLYAEAKRMENFYKLLQQM 469
+I GL E+ KLF +EG EP D+ ++K VL A + +LL
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL--- 444
Query: 470 EKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMK 528
K+GF K G + A +VF + VS +N L+ +L + G
Sbjct: 445 -KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS---WNALIAALGQHGHGA 500
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIA-AYKCL 587
+A+ +++E+ ++PD + + G + Q + + + + IP A Y L
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 588 TKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG 647
LC+ G+ +A ++ T+ E + S +H +G++ G
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH------GNMELGIIAADKLFG 614
Query: 648 CPPGNVVCSAVISGM-CKYGTIEEARKVFSNLRERKL-------LTESDTIVYDEFLIDH 699
P + ++S M G EE +V +R+R + E +T V+ FL+D
Sbjct: 615 LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH-TFLVDD 673
Query: 700 MKKKTADLVMSGLKFFGLESK 720
A+ V L+ G E +
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMR 694
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 96/183 (52%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
Y ++A R + A ++D+ + G D+ V + ++ + R+ + + ++ +M+
Sbjct: 391 YAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMK 450
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
++ C+P+++ Y L+ + +L ++W+EMK+ +V PD ++Y ++I+ + +E
Sbjct: 451 QRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELE 510
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
L++E + IDRA+ G +V F +++ LL+D+ G R D +Y++ +
Sbjct: 511 RCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSAL 570
Query: 416 EGL 418
L
Sbjct: 571 NAL 573
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/393 (18%), Positives = 155/393 (39%), Gaps = 37/393 (9%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLD----EERVTFMV 273
V+++++ GV+P Y RIM+A + G + ++ +FK L E + +
Sbjct: 194 QVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTI 253
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
+ L ++GR E LEVL M++K Y++L+R + ++++E +
Sbjct: 254 VCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKK 313
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+ D ++ G +E + M+ + I ++V F
Sbjct: 314 LLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAV 373
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+ + + A Y I C L K+ KA LF +++G + ++ ++ +Y
Sbjct: 374 KVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMY 433
Query: 454 AEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
+ +R+ + +L+ +M++ G ++ I
Sbjct: 434 GKTRRLSDAVRLMAKMKQRGCKP---------------------------------NIWI 460
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
YN L+D + ++++A ++ E+ A + PD SY+ I + E+++ E + +
Sbjct: 461 YNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFR 520
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
A + K IDE M L++D
Sbjct: 521 MNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQD 553
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/322 (18%), Positives = 129/322 (40%), Gaps = 42/322 (13%)
Query: 187 LMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNK---FGVKPRVFLYNRIMDAL 243
L S G PS + ++ H G +V ++++ +++ F K +Y + +L
Sbjct: 199 LKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSL 258
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA---------------------- 281
++G AL V ++ K+ G+ E + +L++ +A
Sbjct: 259 AKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDP 318
Query: 282 -------------GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
G ++ LEV+ MR+ + +V Q ++V+E
Sbjct: 319 EMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEW 378
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI--YGSLVESFVAV 386
K+ E + YA I + + +LF EM KG D+ + Y ++++ +
Sbjct: 379 AMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG--FDKCVVAYSNIMDMYGKT 436
Query: 387 NKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV 446
++ L+ + G + ++ IYN+LI+ +A K+++ + + PD +S
Sbjct: 437 RRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 447 KPLLVLYAEAKRMENFYKLLQQ 468
++ Y +K +E +L Q+
Sbjct: 497 TSMISAYNRSKELERCVELYQE 518
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 90/209 (43%), Gaps = 4/209 (1%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAF-AYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEIL 203
+ K + WA K++ A AYC R + A+ L + M +G + +
Sbjct: 372 AVKVYEWAMKEECEAGQVTYAIAINAYC--RLEKYNKAEMLFDEMVKKGFDKCVVAYSNI 429
Query: 204 IRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG 263
+ M+ R + KM+ + G KP +++YN ++D R L A ++ + K
Sbjct: 430 MDMYGKTRRLSDAVRLMAKMKQR-GCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+ ++V++ ++ ++ ++ +E+ R + D ++V + +D +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELM 548
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGG 352
R+ ++MK + D Y++ + L + G
Sbjct: 549 RLLQDMKVEGTRLDARLYSSALNALRDAG 577
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 122/290 (42%), Gaps = 1/290 (0%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ + F +Q Y +Y + ++ A +L + M +G P+ + + L+
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
++ + + + +KM++ +P VF Y+ ++ A + DL S+Y + E +
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVLVRILVPQGNLDGCL 323
VT +++ G + GR D+M +VL M C+PDV+ +++ + G +D
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 324 RVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
+E+ + +EP+ + +I ++ + + M+ + Y +++E+F
Sbjct: 287 SWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAF 346
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
V + S G +AD + LI G N F K Q+
Sbjct: 347 ADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQL 396
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/348 (17%), Positives = 138/348 (39%), Gaps = 68/348 (19%)
Query: 214 LRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMV 273
L+ V++ +R + +P+ Y +++ L ++G + A ++D+ E+GL+ +
Sbjct: 105 LQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTA 164
Query: 274 LVKGLCQAGRIDEMLEVLGRMRE-KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD 332
L+ ++ ID+ +L +M+ C+PDVF Y+ L++ V D +++EM +
Sbjct: 165 LLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER 224
Query: 333 RVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG 392
+ P+ + +++G GR ++ + +M
Sbjct: 225 LITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM---------------------------- 256
Query: 393 FDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVL 452
LVS+ + D+ N ++ N+ K + ++ G+EP+ + L+
Sbjct: 257 ------LVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGS 310
Query: 453 YAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD 512
Y + + + +++ M KL FP +
Sbjct: 311 YGKKRMYDKMSSVMEYMRKLEFP---------------------------------WTTS 337
Query: 513 IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLG 560
YN ++++ VG+ K FD++ +K D+ ++ I + + G
Sbjct: 338 TYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 4/232 (1%)
Query: 216 VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV 275
V ++ ++ K +KP + YN ++ AL L A+++ D+ + GL + VTF L+
Sbjct: 163 VEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL 222
Query: 276 KGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVE 335
G+ + E+ +M EK D+ Y + L + + ++ E+K ++
Sbjct: 223 LSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
PDV ++ +I G N G+++E +KE+ G+ D+A + L+ + + +L
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVK 447
K+ S Y L++ L +K E+A ++ ++ DFL +K
Sbjct: 343 FKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTN----DFLKLK 390
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 149/349 (42%), Gaps = 48/349 (13%)
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
R ++ Y VR LV L + EE KK R A II+ G E
Sbjct: 71 RTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQK 130
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS-----GYRADLGIYNNL 414
+F+EM ++ + +L+ ++ ++ FD++++L + + D+ YN L
Sbjct: 131 VFEEMPNRDCKRSVLSFNALLSAY----RLSKKFDVVEELFNELPGKLSIKPDIVSYNTL 186
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
I+ LC + +A L +GL+PD ++ LL + ++ K Q E
Sbjct: 187 IKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL--------LSSYLK--GQFE---- 232
Query: 475 PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALS 532
+ E+++ + EK V++DI YN + L + K+ ++
Sbjct: 233 --------------------LGEEIWAKMVEKN-VAIDIRTYNARLLGLANEAKSKELVN 271
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
LF E+ + LKPD FS++ I ++ G++ +A + +I++ P A + L +C
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 593 KIGEIDEAMMLVRDCLGNVTSGPMEFMYSLT--VIHACKSNDAEKVIGV 639
K G+ + A+ L ++ + L ++ K +AE+++ +
Sbjct: 332 KAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 107/232 (46%), Gaps = 1/232 (0%)
Query: 238 RIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
RI+ + G + A V+++ ++F L+ + + D + E+ + K
Sbjct: 114 RIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 298 LC-RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEE 356
L +PD+ +Y L++ L + +L + + +E++ ++PD++ + T++ G+ E
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 357 GYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIE 416
G ++ +M K ID Y + + K +L +L +SG + D+ +N +I
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
G N K ++A ++ ++ G PD + LL +A E+ +L ++
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 184 LPELMDSQGKPP--------SEKQFEILIRMHSDAGRGLRVYHVYEKMRNK--FGVKPRV 233
LP +D G+PP + + L++ + GR + E MR + P
Sbjct: 393 LPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDE 452
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGR 293
Y ++ A + G +D A V + G+ R+T+ VL+KG C+ +ID ++L
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 294 MREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
M E PDV +Y +++ + + G L + EM+ + P ++Y T++ + G
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSG 572
Query: 353 RVEEGYVLFKEMKSKGHL-IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+ + +F EM + + +D + LVE + + + ++ + +G+ ++ Y
Sbjct: 573 QPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATY 632
Query: 412 NNLIEGLCNLNKFEKAHKLFQ 432
+L G+ K A L++
Sbjct: 633 GSLANGVSQARKPGDALLLWK 653
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 185/461 (40%), Gaps = 89/461 (19%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P F ++ ++ G + + ++E+M +++ +P V YN ++ R G +L +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEM-SEWDCEPDVLTYNVMIKLCARVGRKELIVF 292
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK---LCR----------- 300
V + + G+ T LV G + ++ MREK LC+
Sbjct: 293 VLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLK 352
Query: 301 ----------------PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP-------- 336
+ Y+ + + +G + V++++ + V+P
Sbjct: 353 EKEEEEAEDDEDAFEDDEDSGYSARDEV-----SEEGVVDVFKKLLPNSVDPSGEPPLLP 407
Query: 337 -----DVMAYATIITGLSNGGRVEEGYVLFKEMK---SKGHLIDRAIYGSLVESFVAVNK 388
D Y T++ G GRV + + + M+ + D Y ++V +FV
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVK 447
+ +L ++ G A+ YN L++G C + ++A L ++T G+EPD +S
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVS-- 525
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
Y ++ G +IDD A AL F+ ++ +G
Sbjct: 526 ---------------YNIIID----GCILIDDSAG-------------ALAFFNEMRTRG 553
Query: 508 YVSVDI-YNILMDSLHKVGEMKKALSLFDE-INGANLKPDSFSYSIAILCHVDLGEIKQA 565
I Y LM + G+ K A +FDE +N +K D ++++ + + LG I+ A
Sbjct: 554 IAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDA 613
Query: 566 CECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+++ E P++A Y L G+ + + +A++L ++
Sbjct: 614 QRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKE 654
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 31/307 (10%)
Query: 153 EKQKGYHHNFASYNAFAYC-MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAG 211
+ + H + +Y +N RA L E M G P + + +L++ +
Sbjct: 443 QDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE-MARMGVPANRITYNVLLKGYCKQL 501
Query: 212 RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTF 271
+ R + +M G++P V YN I+D I AL+ +++ + G+ ++++
Sbjct: 502 QIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISY 561
Query: 272 MVLVKGLCQAGR-------IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
L+K +G+ DEM M + + D+ A+ +LV G ++ R
Sbjct: 562 TTLMKAFAMSGQPKLANRVFDEM------MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQR 615
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
V MK++ P+V Y ++ G+S + + +L+KE+K +
Sbjct: 616 VVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER----------------C 659
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
AV K A D D + D G+ + L + F+KA ++ + G+ P+
Sbjct: 660 AVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKT 719
Query: 445 SVKPLLV 451
K + V
Sbjct: 720 KYKKIYV 726
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/362 (18%), Positives = 136/362 (37%), Gaps = 30/362 (8%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
PD A+ ++ +N G ++ + LF+EM D Y +++ V + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSV--------- 446
L+ ++ G + + ++L+ A ++ Q ++ D V
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREK--RRDLCKVLRECNAEDL 351
Query: 447 ------KPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKG-PIMALEV 499
+ A ++ Y ++ + G V+D + V+ G P + +V
Sbjct: 352 KEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEG--VVDVFKKLLPNSVDPSGEPPLLPKV 409
Query: 500 FSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEI---NGANLKPDSFSYSIAILCH 556
F+ IY LM K G + + + + + N PD +Y+ +
Sbjct: 410 FA-------PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAF 462
Query: 557 VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPM 616
V+ G + +A + ++ M + Y L KG CK +ID A L+R+ + P
Sbjct: 463 VNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPD 522
Query: 617 EFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
Y++ + +D+ + NEM +G P + + ++ G + A +VF
Sbjct: 523 VVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFD 582
Query: 677 NL 678
+
Sbjct: 583 EM 584
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 156/357 (43%), Gaps = 16/357 (4%)
Query: 126 RVTPSLVAEVLKVQTNPTL---SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAAD 182
++ S + EVL+ + +P +FF WA + H+ Y + D
Sbjct: 57 QLDSSCINEVLR-RCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILK---IRAKPD 112
Query: 183 QLPELMDSQGKPP---SEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRI 239
+ +++S K + K I++ + + A V K +F V YN +
Sbjct: 113 LIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKF-PEFNVCADTVAYNLV 171
Query: 240 MDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC 299
+ G L++A + + GL + +T+ ++ G C AG+ID+ + M + C
Sbjct: 172 IRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDC 231
Query: 300 RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR----VEPDVMAYATIITGLSNGGRVE 355
+ Y+ ++ + G+++ L + EM+K+ + P+ + Y +I RVE
Sbjct: 232 VLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVE 291
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK-VGAGFDLLKDLVSSGYRADLGIYNNL 414
E ++ M ++G + +R L++ + ++ V A L+ LV G + +++
Sbjct: 292 EALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSA 351
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
L + ++E+A K+F++ + G+ PD L+ + +R + + L Q++EK
Sbjct: 352 TVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEK 408
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEE---RVTFMVLVKGLC-QAGRIDEMLE 289
++Y + D L DL V + +++ EE V M +V LC QA DE L
Sbjct: 96 YMYTKACDILKIRAKPDLIKYVIESYRK----EECFVNVKTMRIVLTLCNQANLADEALW 151
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
VL + E D AY +++R+ +G+L+ + +EM + PDV+ Y ++I G
Sbjct: 152 VLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYC 211
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG----YR 405
N G++++ + L KEM +++ Y ++E + +LL ++
Sbjct: 212 NAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLIS 271
Query: 406 ADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEA-KRMENFYK 464
+ Y +I+ C + E+A + G P+ ++ L+ E + ++ K
Sbjct: 272 PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSK 331
Query: 465 LLQQMEKLG 473
L+ ++ KLG
Sbjct: 332 LIDKLVKLG 340
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 488 VEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSF 547
+ K ++ + SY KE+ +V+V I++ ++ +AL + + N+ D+
Sbjct: 107 IRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTV 166
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEMSCI---PSIAAYKCLTKGLCKIGEIDEAMMLV 604
+Y++ I D G++ A I EM C+ P + Y + G C G+ID+A L
Sbjct: 167 AYNLVIRLFADKGDLNIA---DMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 605 R-----DCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG----CPPGNVVC 655
+ DC+ N + YS + CKS D E+ + +L EM ++ P V
Sbjct: 224 KEMSKHDCVLNSVT------YSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 656 SAVISGMCKYGTIEEARKVFSNLRER 681
+ VI C+ +EEA V + R
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNR 303
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 7/279 (2%)
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF--QVTIQEGLEPDFLSVK 447
G +L K+L S+ + D N ++ C+ N+F+ + F T+ ++ K
Sbjct: 42 GCTSNLEKELASANVQLDSSCINEVLRR-CDPNQFQSGLRFFIWAGTLSSHRHSAYMYTK 100
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKG 507
+L AK Y + ++ F + + ++ + AL V E
Sbjct: 101 ACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFN 160
Query: 508 YVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
+ + YN+++ G++ A L E++ L PD +Y+ I + + G+I A
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCL---GNVTSGPMEFMYSLT 623
++ + C+ + Y + +G+CK G+++ A+ L+ + G P Y+L
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 624 VIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGM 662
+ C+ E+ + VL+ M +GC P V +I G+
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 155/380 (40%), Gaps = 66/380 (17%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG-LDEERVTFMVLVKGLCQAGR 283
N+ G+ P + YN I A + ++AL Y F ++ L+ TF +LVKGL
Sbjct: 157 NQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDN 216
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+++ +E+ M K D Y+ L+ V + DG L++++E+K+
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKL---------- 266
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV--S 401
GG V++G V YG L++ + + ++ V +
Sbjct: 267 -------GGFVDDGVV----------------YGQLMKGYFMKEMEKEAMECYEEAVGEN 303
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
S R YN ++E L KF++A KLF +E P L+V M N
Sbjct: 304 SKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN-----LGTFNVMVN 358
Query: 462 FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKE-KGYVSVDIYNILMDS 520
Y + E+ A+EVF + + K +N LM+
Sbjct: 359 GYCAGGKFEE------------------------AMEVFRQMGDFKCSPDTLSFNNLMNQ 394
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
L + +A L+ E+ N+KPD ++Y + + G+I + + ++E + P+
Sbjct: 395 LCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
Query: 581 IAAYKCLTKGLCKIGEIDEA 600
+A Y L L K G++D+A
Sbjct: 455 LAVYNRLQDQLIKAGKLDDA 474
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 41/246 (16%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV-----TFMVLVKGLCQAGR 283
V+ YN +++AL G D AL ++D K++ + TF V+V G C G+
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK 365
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+E +EV +M + C PD ++ L+ L L +++ EM++ V+PD Y
Sbjct: 366 FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSG 403
++ G+++EG +K M V S
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTM-----------------------------------VESN 450
Query: 404 YRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFY 463
R +L +YN L + L K + A F + + + L+ D + K ++ +EA R++
Sbjct: 451 LRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEML 509
Query: 464 KLLQQM 469
K++ +M
Sbjct: 510 KIVDEM 515
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSE-----KQFEILIRMHSDAGRGLRVYH 218
+YN ++ N A +L + + + PP F +++ + G+
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
V+ +M + F P +N +M+ L L A +Y + +E + + T+ +L+
Sbjct: 372 VFRQMGD-FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTC 430
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
+ G+IDE M E RP++ Y L L+ G LD + + +M +++ D
Sbjct: 431 FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA-KSFFDMMVSKLKMDD 489
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEM 364
AY I+ LS GR++E + EM
Sbjct: 490 EAYKFIMRALSEAGRLDEMLKIVDEM 515
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 155/392 (39%), Gaps = 30/392 (7%)
Query: 113 WGPPVVTELSKLRRV-TPSLVAEVLK-VQTNPTLSFKFFHWAEKQKG---YHHNFASYNA 167
W V EL +++ V + + V VLK ++ +P + FFHW Y H+ +YNA
Sbjct: 209 WSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNA 268
Query: 168 FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKF 227
+ R N + + M + G + + R + +YE M +
Sbjct: 269 ALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDG- 327
Query: 228 GVKPRVFLYNRIMDALIRTGH--LDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
KP + + ++ L + + LDL V ++ G + + + + L GR D
Sbjct: 328 PFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFD 387
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
E E+ MR PD Y+ LV L L+ V ++M+ PD+ + +I
Sbjct: 388 EAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILI 447
Query: 346 TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV-GAGFDLLKDLVSSGY 404
G +++ F M KG ID + L++ FV NK GA L++ + ++
Sbjct: 448 QGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANV 507
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
+ Y LI+ L + K E+A L Q+ ++ YAEA F
Sbjct: 508 KPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPA-----------YAEA-----FDG 551
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKGPIMA 496
L + F ++D +F + K P A
Sbjct: 552 YLAK-----FGTLEDAKKFLDVLSSKDSPSFA 578
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGV 639
S A Y + + L +G DEA + + + N P YS V CK+ E+ GV
Sbjct: 369 SKAVYDGIHRSLTSVGRFDEAEEITK-AMRNAGYEPDNITYSQLVFGLCKAKRLEEARGV 427
Query: 640 LNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD--TIVYDEFLI 697
L++M QGC P + +I G CK +++A F+N+ E+ +S+ ++ D F+I
Sbjct: 428 LDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVI 487
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 128/322 (39%), Gaps = 31/322 (9%)
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
Y + + N V + ++ ++ ++GY DL Y + + KL++ +
Sbjct: 266 YNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMM 325
Query: 436 QEGLEPD---------FLSVKP---LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARF 483
+P +LS P L +++ +++ E+ K L + V D + R
Sbjct: 326 DGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSK------AVYDGIHRS 379
Query: 484 FSI---FVEKKGPIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEING 539
+ F E A E+ ++ GY +I Y+ L+ L K +++A + D++
Sbjct: 380 LTSVGRFDE------AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEA 433
Query: 540 ANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDE 599
PD +++I I H E+ +A C ++E L G + +
Sbjct: 434 QGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEG 493
Query: 600 AMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
A + + + + N P + Y L + K +E+ + +L M +Q P A
Sbjct: 494 ASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP---AYAEAFD 550
Query: 660 SGMCKYGTIEEARKVFSNLRER 681
+ K+GT+E+A+K L +
Sbjct: 551 GYLAKFGTLEDAKKFLDVLSSK 572
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/457 (20%), Positives = 195/457 (42%), Gaps = 33/457 (7%)
Query: 267 ERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+R+ V+ L +A +D ++ + RP VF ++ + + ++
Sbjct: 144 QRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLF 203
Query: 327 EEM-KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI-YGSLVESFV 384
+ K+ + P+V++Y II + G V+E +++ + + ++ Y L + V
Sbjct: 204 QYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLV 263
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-----QVTIQEGL 439
++G LL++++S G AD +YNNLI G +L F+KA + F + T+ +G+
Sbjct: 264 QAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGI 323
Query: 440 EPDFLSVKPLLVLY-----AEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI 494
V + Y + + ME++ LL + ++ P + L F F KK
Sbjct: 324 ------VNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKF-GKKDEA 376
Query: 495 MAL--EVFSYLKEKGYVSV--DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS 550
AL E+ +SV D I+++ K+GE +A++ F ++ G+ + F
Sbjct: 377 WALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKV-GSKVTSKPFVMD 435
Query: 551 IAILCHV-----DLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
C++ + G + +A + + S +++ + K ID+A+ ++
Sbjct: 436 YLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKML- 494
Query: 606 DCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKY 665
D + +V + + K+ + VL +M ++ P + V+ G+C
Sbjct: 495 DRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDG 554
Query: 666 GTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHMKK 702
+++A+ + + + T V EF+I+ +K
Sbjct: 555 DALDQAKDIVGEMIRHNVGV---TTVLREFIIEVFEK 588
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 167/422 (39%), Gaps = 20/422 (4%)
Query: 201 EILIRMHS-DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDF 259
+ LIR DA L V+ R P VF N I+ A+ R ++S++ F
Sbjct: 153 QSLIRASDLDAASKLARQSVFSNTR------PTVFTCNAIIAAMYRAKRYSESISLFQYF 206
Query: 260 -KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGR-MREKLCRPDVFAYTVLVRILVPQG 317
K+ + V++ ++ C G +DE LEV + P Y L + LV G
Sbjct: 207 FKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAG 266
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
+ + EM D Y +I G + G ++ F E+KSK + D +
Sbjct: 267 RIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNA 326
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQE 437
+ +E + + + L+ +R N L+E K ++A LF +
Sbjct: 327 TFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDN 386
Query: 438 GLEPDFLSVKP--LLVLYAEAKRMENFYKLLQQMEKLGF-----PVIDDLARFFSIFVE- 489
P+ LSV + ++ E +M F + + +K+G P + D + +I
Sbjct: 387 HAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRF 446
Query: 490 -KKGPIMALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
++G + E F + D + ++D+ K + A+ + D + NL+ +
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 547 FSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+ + G++ ++ E K+ E P + Y + +GLC +D+A +V +
Sbjct: 507 DFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGE 566
Query: 607 CL 608
+
Sbjct: 567 MI 568
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/362 (18%), Positives = 136/362 (37%), Gaps = 27/362 (7%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P+ + +I H D G VY + P Y + L++ G + A S
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAAS 273
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
+ + G + + L++G G D+ +E ++ K D +
Sbjct: 274 LLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWF 333
Query: 315 PQGNLDGCLRVWEEM--KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM-------- 364
+GN + + + KK R+ P ++ G+ +E + LF EM
Sbjct: 334 EKGNDKEAMESYRSLLDKKFRMHPPTG--NVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 365 ------KSKGHLIDRAI-YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+ G +++ G E+ KVG+ + S + D Y N++
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGS------KVTSKPFVMDYLGYCNIVTR 445
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
C +A + F + L D S + ++ Y +A+R+++ K+L +M + V+
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVV 505
Query: 478 DDL-ARFFSIFVEKKGPIMALEVFSYLKEK-GYVSVDIYNILMDSLHKVGEMKKALSLFD 535
D AR F ++ + EV + + E+ IY++++ L + +A +
Sbjct: 506 ADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVG 565
Query: 536 EI 537
E+
Sbjct: 566 EM 567
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 165/392 (42%), Gaps = 63/392 (16%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
G ++ ++YE + K +KP +++ N +M+ + + L L VY + + + + +
Sbjct: 281 GDYVKSRYIYEDLL-KENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTS 337
Query: 271 FMVLVKGLCQAGRID---EMLEVLGRMREK-LCRPDVFAYTVLVRILVPQGNLDGCLRVW 326
+ +L+K C AGR+D ++ + RM L + D F Y ++++ L+V
Sbjct: 338 YNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVK 397
Query: 327 EEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAV 386
++MK V P+ ++++I+ +N G VE+ LF+EM + G + + L+ + V
Sbjct: 398 DDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEA 457
Query: 387 NKVGAGFDLLK--------------DLVSSGYRADLGIY-NNLIEGLCNLNK-------- 423
+ F L + D+VS G + I NN L N N
Sbjct: 458 CQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQAS 517
Query: 424 ----FEKAHKLFQVTIQE------------------GLEPDFLSVKPLLVLYAEAKRMEN 461
F+ + + ++ GL P+ ++ L+ + + +E
Sbjct: 518 KRFCFKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEG 577
Query: 462 FYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFS----YLKEKGYVSVDIYNI 516
++L+ M G P + I E K +A +F Y + +V+ YN
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVT---YNT 634
Query: 517 LMDSLHKVG---EMKKALSLFDEINGANLKPD 545
L+ + K G E+++ L+++ ++ A KP+
Sbjct: 635 LLKARSKYGSLLEVRQCLAIYQDMRNAGYKPN 666
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 220 YEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLC 279
Y + +F KP YN ++ A + L D+ K GL ++T+ L+
Sbjct: 513 YIQASKRFCFKPTTATYNILLKACGTDYYRGKEL--MDEMKSLGLSPNQITWSTLIDMCG 570
Query: 280 QAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVM 339
+G ++ + +L M RPDV AYT ++I L ++EEM++ +++P+ +
Sbjct: 571 GSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWV 630
Query: 340 AYATIITGLSNGG---RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV--AVNKVGAGFD 394
Y T++ S G V + ++++M++ G+ + L+E + + + G D
Sbjct: 631 TYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQD 690
Query: 395 LLKD 398
+ D
Sbjct: 691 KISD 694
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 165/429 (38%), Gaps = 61/429 (14%)
Query: 234 FLYNRIMDALIRTGHLDLALSVYDDFKE--DGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
L RI+ + G + ++ Y+ K+ D + M+ V GLC G + +
Sbjct: 233 LLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLC--GDYVKSRYIY 290
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
+ ++ +P+++ L+ V +L L+V++ M+ V D+ +Y ++
Sbjct: 291 EDLLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLA 348
Query: 352 GRVEEGYVLFKE---MKSKGHL-IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
GRV+ ++KE M+S G L +D Y ++++ F + D+ S G +
Sbjct: 349 GRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPN 408
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+++LI N E+A+ LF+ + G EP+ LL EA + + ++L Q
Sbjct: 409 THTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQ 468
Query: 468 QMEKLGF------------------------------------PVIDDLARF-------- 483
+ P I RF
Sbjct: 469 SWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTAT 528
Query: 484 FSIFVEKKGP--IMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGA 540
++I ++ G E+ +K G I ++ L+D G+++ A+ + ++ A
Sbjct: 529 YNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSA 588
Query: 541 NLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEA 600
+PD +Y+ AI + +K A ++ P+ Y L K K G + E
Sbjct: 589 GTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLE- 647
Query: 601 MMLVRDCLG 609
VR CL
Sbjct: 648 ---VRQCLA 653
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/551 (19%), Positives = 208/551 (37%), Gaps = 82/551 (14%)
Query: 157 GYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRV 216
G+ N +YN + AA L + + G P E + +I A
Sbjct: 344 GFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEA 403
Query: 217 YHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV------- 269
H Y++++ + G KP F +++ + G D A+ +D G +
Sbjct: 404 KHYYQELK-RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQA 462
Query: 270 ---------------------------TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
+F LV + G +D+ LG +REK R
Sbjct: 463 YEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDD---CLGLLREKKWRDS 519
Query: 303 VFA---YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
F Y +L+ G L ++++ + E ++ +T+I + G E
Sbjct: 520 AFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEK 579
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLL------KDLV------------- 400
L+ +KS G ++DR + +V +V + +L KD+V
Sbjct: 580 LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIY 639
Query: 401 -----------------SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDF 443
SG + +YN +I ++ F+ I+ G P+
Sbjct: 640 QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNT 699
Query: 444 LSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYL 503
++ LL +Y +AK + +L ++ G + + + + K +
Sbjct: 700 VTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 504 KEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
+ G+ VS++ YN L+D+ K +M+K S+ + + PD ++Y+I I + + G I
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG-NVTSGPMEFMYS 621
+ + ++ E P + +Y L K G ++EA+ LV++ G N+ P + Y+
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII--PDKVTYT 877
Query: 622 LTVIHACKSND 632
++ A + ND
Sbjct: 878 -NLVTALRRND 887
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 14/260 (5%)
Query: 131 LVAEVLKVQTNPTLSFKFFH--WAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELM 188
L ++L++ L K H + ++ G H N YN C R E M
Sbjct: 631 LFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEM 690
Query: 189 DSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPR-----VFLYNRIMDAL 243
G P+ F +L+ ++ A +++K+ F + R V YN I+ A
Sbjct: 691 IRYGFTPNTVTFNVLLDVYGKA-------KLFKKVNELFLLAKRHGVVDVISYNTIIAAY 743
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
+ S + + DG + L+ + ++++ +L RM++ PD
Sbjct: 744 GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDH 803
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
+ Y +++ I QG +D V +E+K+ + PD+ +Y T+I GG VEE L KE
Sbjct: 804 YTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKE 863
Query: 364 MKSKGHLIDRAIYGSLVESF 383
M+ + + D+ Y +LV +
Sbjct: 864 MRGRNIIPDKVTYTNLVTAL 883
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 126/651 (19%), Positives = 238/651 (36%), Gaps = 128/651 (19%)
Query: 143 TLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNH-HRAADQLPELMDSQGKPPSEKQFE 201
T + KFF W NF +Y+ + R RA D + EL S + F
Sbjct: 155 TNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFN 214
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
+I + G +++ + M +FGV+P V +M + +++ A + ++
Sbjct: 215 TVIYACTKKG-NVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK 273
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
G+ +C++ AY+ ++ I D
Sbjct: 274 FGI-------------VCES-----------------------AYSSMITIYTRLRLYDK 297
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
V + MK+DRV + + ++ S G++E + M++ G + Y +L+
Sbjct: 298 AEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLIT 357
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
+ + K+ A L L + G D Y ++IEG + +E+A +Q + G +P
Sbjct: 358 GYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKP 417
Query: 442 DFLSVKPLLVLYAE-------AKRMENFYK-----------LLQQMEKLG---------- 473
+ ++ L+ L A+ K +E+ +LQ EK+G
Sbjct: 418 NSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLK 477
Query: 474 -----------------------FPVIDDLARFFSIFVEKKGPIMALEVFSY------LK 504
++DD + EKK A E Y K
Sbjct: 478 GSFHNHIRLNQTSFSSLVMAYVKHGMVDDC---LGLLREKKWRDSAFESHLYHLLICSCK 534
Query: 505 EKGYVS--VDIYNILMDSLHKV---------------GEMKKALSLFDEINGANLKPDSF 547
E G ++ V IYN M+S ++ GE +A L+ + + + D
Sbjct: 535 ESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRI 594
Query: 548 SYSIAILCHVDLGEIKQACECHNKIIEM-SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
+SI + +V G +++AC + E +P + ++ + + K D+ L
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYR 654
Query: 607 CLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYG 666
+ E MY+ + ++ +++ G EM++ G P V + ++ YG
Sbjct: 655 IRKSGIHWNQE-MYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLD---VYG 710
Query: 667 TIEEARKVFSNLRERKLLTES----DTIVYDEFLIDHMKKKTADLVMSGLK 713
K+F + E LL + D I Y+ + + K K + S +K
Sbjct: 711 KA----KLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIK 757
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 147/369 (39%), Gaps = 45/369 (12%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE-K 297
++D G A +Y + K G+ +R+ F ++V+ +AG ++E VL M E K
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
PDV+ + ++RI D ++ ++K + + Y +I + ++E
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDEL 683
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
F+EM + G+ + +N L++
Sbjct: 684 SGTFEEM-----------------------------------IRYGFTPNTVTFNVLLDV 708
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
F+K ++LF + + G+ D +S ++ Y + K N ++ M+ GF V
Sbjct: 709 YGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVS 767
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-----IYNILMDSLHKVGEMKKALS 532
+ ++ ++ G +E F + ++ S YNI+++ + G + +
Sbjct: 768 LEA---YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAD 824
Query: 533 LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLC 592
+ E+ + L PD SY+ I + G +++A ++ + IP Y L L
Sbjct: 825 VLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALR 884
Query: 593 KIGEIDEAM 601
+ E EA+
Sbjct: 885 RNDEFLEAI 893
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 253 LSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRI 312
+ ++ + + GL VT+ L++GL QAG D E+ M PD+ Y +L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 313 LVPQGNLDGCLRV------WE---EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
L G L+ L W+ + V+P+V+ Y T+I+G G EE Y LF++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYN 412
MK G L D Y +L+ + + A +L+K++ S + D Y
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G+ Y ++ L + G D+A ++ + DG+ + +T+ +L+ GLC+ G++++
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 288 LEVLGRMRE----------KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
L V G++ + K +P+V YT ++ +G + ++ +MK+D PD
Sbjct: 71 L-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPD 129
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
Y T+I G L KEM+S D + YG LV + ++ GF
Sbjct: 130 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGF 184
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 26/155 (16%)
Query: 288 LEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
+E+ M ++ + YT L++ L G+ D +++EM D V PD+M Y ++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
L G++E+ V KV G+DL L G + +
Sbjct: 61 LCKNGKLEKALV--------------------------AGKVEDGWDLFCSLSLKGVKPN 94
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+ Y +I G C E+A+ LF+ ++G PD
Sbjct: 95 VVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPD 129
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
LF+EM +G + + Y +L++ ++ K++VS G D+ YN L++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 420 NLNKFEKA---------HKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
K EKA LF +G++P+ ++ ++ + + E Y L ++M+
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 471 KLGFPVID 478
+ G P+ D
Sbjct: 123 EDG-PLPD 129
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
+ LF E++ L ++ +Y+ I G+ A E +++ P I Y L G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 591 LCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPP 650
LCK G++++A++ G V G + SL++ +G P
Sbjct: 61 LCKNGKLEKALV-----AGKVEDG-WDLFCSLSL---------------------KGVKP 93
Query: 651 GNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFLIDHM----KKKTAD 706
V + +ISG CK G EEA +F ++E L +S T Y+ + H+ K +A+
Sbjct: 94 NVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGT--YNTLIRAHLRDGDKAASAE 151
Query: 707 LV--MSGLKFFG 716
L+ M +F G
Sbjct: 152 LIKEMRSCRFAG 163
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/469 (18%), Positives = 181/469 (38%), Gaps = 61/469 (13%)
Query: 127 VTPSLVAEVLKVQTNPTLS---FKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQ 183
++ SL+ +L NP + FFHW+ + H SY + + + A
Sbjct: 75 LSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARA 134
Query: 184 LPE--LMDSQGKPPSEKQFEILIRMHSDAGRGLRVY----HVYEKMRN------------ 225
L E L++S PP + L+ + + V+ Y K+R
Sbjct: 135 LIESSLLNS---PPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLC 191
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
G V N ++ ++ DL +Y+ + + +T ++++ LC+ GR+
Sbjct: 192 DCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLK 251
Query: 286 EMLEVLGRMREKLCRP-----------------------------------DVFAYTVLV 310
E++++L R+ K C P D Y+++V
Sbjct: 252 EVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVV 311
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
+G+L +V++EM + + Y + G V+E L EM+ G
Sbjct: 312 YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVS 371
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+ L+ F G + + +V+ G +N +++ + + +A+++
Sbjct: 372 PYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEI 431
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEK 490
+I +G PD + L+ + E ++ KL +ME ++ R + +
Sbjct: 432 LTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT 491
Query: 491 KGPIMALEVFSYLKEKGYV--SVDIYNILMDSLHKVGEMKKALSLFDEI 537
G + A E + + +K + + DIY+ L+ + K+G+ A +++E+
Sbjct: 492 CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 152/359 (42%), Gaps = 40/359 (11%)
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVT 434
++ LV+ + + + GFD+ K L G+ + N LI + ++++
Sbjct: 166 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 225
Query: 435 IQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM-EKLGFP-VIDDLARFFSIFVEKKG 492
I + + P+ ++++ ++ + + R++ LL ++ K P VI + + F + E +
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 493 PIMALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
++ + L K V I Y+I++ + K G++ A +FDE+ +SF Y++
Sbjct: 286 E-ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIG------EIDEAMM--- 602
+ + G++K+A +++ E P + CL G + G E E M+
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRG 404
Query: 603 LVRDC------------LGNVTSG-------------PMEFMYSLTVIHACKSNDAEKVI 637
L+ C + NV P E YS + + ND ++ +
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 638 GVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDEFL 696
+ EM + PG V ++I G+C G +E K +++R L E + +YD +
Sbjct: 465 KLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR--LIEPNADIYDALI 521
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/575 (18%), Positives = 226/575 (39%), Gaps = 87/575 (15%)
Query: 152 AEKQKGYHHNFASYNAFAYCMNR-NNHHRAAD-QLPELMDSQGKPPSEKQFEILIRMHSD 209
+K + + + A C ++ + H R + Q E + Q S + +I +++
Sbjct: 34 TQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAE 93
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG-HLDLALSVYDDFKEDGLDEER 268
G+ + + V+++M + YN ++ A+I+ L A ++ D E +
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTS-----YNAMITAMIKNKCDLGKAYELFCDIPE----KNA 144
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
V++ ++ G +AGR DE + K D A VL+ + G + +RV++
Sbjct: 145 VSYATMITGFVRAGRFDEAEFLYAETPVKF--RDSVASNVLLSGYLRAGKWNEAVRVFQG 202
Query: 329 MKKDRV---------------------------EPDVMAYATIITGLSNGGRVEEGYVLF 361
M V E +V+ + +I G G E+G+ LF
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRA--------------- 406
M+ +G + V N + F +D V YR
Sbjct: 263 LRMRQEGDVK------------VNSNTLAVMFKACRDFVR--YREGSQIHGLVSRMPLEF 308
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
DL + N+L+ L +A +F V + D +S L+ + K++ Y+L
Sbjct: 309 DLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELF 364
Query: 467 QQMEKLGFPVIDDLARFFSIFVEKKGPIM-ALEVFSYLKEKGYVSVDIYNILMDSLHKVG 525
++M D+ + FS KG I +E+F + EK ++ + ++ + G
Sbjct: 365 EKMPGKDMVSWTDMIKGFS----GKGEISKCVELFGMMPEKDNIT---WTAMISAFVSNG 417
Query: 526 EMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYK 585
++AL F ++ + P+S+++S + L ++ + + H ++++M+ + ++
Sbjct: 418 YYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQN 477
Query: 586 CLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
L CK G ++A + C+ S P Y+ + + +K + + + +
Sbjct: 478 SLVSMYCKCGNTNDAYKIF-SCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRE 680
G P V A++S G ++ K F +++
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKS 567
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 171/414 (41%), Gaps = 41/414 (9%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
++ + GR + ++++M + V + ++D + G + ++ +++
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTER-----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 263 G-LDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG 321
G + T V+ K R E ++ G + D+F L+ + G +
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 322 CLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
V+ MK D +++ ++ITGL ++ E Y LF++M K D + +++
Sbjct: 329 AKAVFGVMKN----KDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIK 380
Query: 382 SFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
F ++ +L + D + +I + +E+A F +Q+ + P
Sbjct: 381 GFSGKGEISKCVELFGMMP----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP 436
Query: 442 DFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA---RFFSIFVEKKGPIMALE 498
+ + +L A + ++ ++ K+ +++DL+ S++ + A +
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMN--IVNDLSVQNSLVSMYCKCGNTNDAYK 494
Query: 499 VFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC--- 555
+FS + E VS YN ++ G KKAL LF + + +P+ ++ +A+L
Sbjct: 495 IFSCISEPNIVS---YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF-LALLSACV 550
Query: 556 ---HVDLGE--IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+VDLG K +N IE P Y C+ L + G +D+A L+
Sbjct: 551 HVGYVDLGWKYFKSMKSSYN--IE----PGPDHYACMVDLLGRSGLLDDASNLI 598
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
+ L+K L + G + E L RM+E C+PDV+AY ++ L GN + ++
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 329 MKKD--RVEPDVMAYATIIT-----GLSNG------GRVEEGYVLFKEMKSKGHLIDRAI 375
M+ R PD Y +I+ G+ G R+ E +F+EM +G + D
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
Y L++ N++G +L +D+ + G + YN+ I N+ E A ++ +
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 436 QEGLE-PDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
+ G P + PL+ E +R L+ +M + G
Sbjct: 346 KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 139/359 (38%), Gaps = 58/359 (16%)
Query: 107 RKNGYKWGPPV----VTELSKLRR-----VTPSLVAEVLKVQTNPTLSFKFFHWAEKQKG 157
R+ G++ P+ +++ S+ RR + P + KV + +FF W E G
Sbjct: 63 RQKGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKKVSIGLQKALEFFFWIETHFG 122
Query: 158 YHHNFASYNAFAYCMNRNNHHRAA-DQLPELMDSQ-GKPP-SEKQFEILIRMHSDAGRGL 214
+ HN + A + + N + D L ++ + GK + L++ + G
Sbjct: 123 FDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVK 182
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVL 274
+ +M+ ++ KP V+ YN I++AL R G+ A + D + G
Sbjct: 183 EALATFYRMK-EYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYP------- 234
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGC-----LRVWE-- 327
PD + YT+L+ G GC R+WE
Sbjct: 235 --------------------------PDTYTYTILISSYCRYGMQTGCRKAIRRRMWEAN 268
Query: 328 ----EMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESF 383
EM PDV+ Y +I G R+ LF++MK+KG + ++ Y S + +
Sbjct: 269 RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Query: 384 VAVNKVGAGFDLLKDLVSSGYRA-DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEP 441
N++ ++++ + G+ Y LI L + +A L ++ GL P
Sbjct: 329 SVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 16/235 (6%)
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
T L++ L +G + L + MK+ +PDV AY TII L G ++ L +M+
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 367 KG--HLIDRAIYGSLVESFVAV-----------NKVGAGFDLLKDLVSSGYRADLGIYNN 413
G + D Y L+ S+ ++ + ++++ G+ D+ YN
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNC 288
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL- 472
LI+G C N+ +A +LF+ +G P+ ++ + Y+ +E ++++ M+KL
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG 348
Query: 473 -GFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD-IYNILMDSLHKVG 525
G P VE + A ++ + E G V + Y ++ D+L G
Sbjct: 349 HGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 24/281 (8%)
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKL--GFPVID--DLARFFS 485
F + G + + ++ + + L A+ + + L+Q+ + G V+ +
Sbjct: 114 FFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMK 173
Query: 486 IFVEKKGPIMALEVFSYLKEKGYVSVDIY--NILMDSLHKVGEMKKALSLFDEIN--GAN 541
E+ AL F +KE + D+Y N ++++L +VG KKA L D++ G
Sbjct: 174 CLGEEGFVKEALATFYRMKEY-HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFR 232
Query: 542 LKPDSFSYSIAILCHVDLGEIKQAC---------ECHNKIIEM---SCIPSIAAYKCLTK 589
PD+++Y+I I + G ++ C E + EM +P + Y CL
Sbjct: 233 YPPDTYTYTILISSYCRYG-MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLID 291
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQG-C 648
G CK I A+ L D + P + Y+ + + +N+ E I ++ M + G
Sbjct: 292 GCCKTNRIGRALELFED-MKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 649 PPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
PG+ + +I + + EAR + + E L+ T
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYT 391
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 5/321 (1%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+F F E + G+ N +Y + + + A + E M G +Q +I
Sbjct: 250 AFDVFSKTE-EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNII 308
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
G+ Y VYE + K P F+ I G + A + D +
Sbjct: 309 TWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEAR 368
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLR 324
F ++ LC+ + + +L M K P + ++V G+LD
Sbjct: 369 RRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKE 428
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
V + M+ ++PDV Y II+G + GG ++E + E K K + Y +L+ +
Sbjct: 429 VLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYC 488
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC-NLNKFEKAHKLFQVTIQEGLEPDF 443
+ + LL ++ G + + YN LI+ C +EKA LF+ Q+GL +
Sbjct: 489 KIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNA 548
Query: 444 LS---VKPLLVLYAEAKRMEN 461
+S ++ + + +EAK E+
Sbjct: 549 ISQGLIRAVKEMESEAKVTED 569
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 132/308 (42%), Gaps = 21/308 (6%)
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
G+ + + +F + + G + Y +E+ + + + + ++ SG ++
Sbjct: 245 GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQM 304
Query: 412 NNLIEGLCNLNKFEKAHKLFQV--TIQEGLEPDFLSVKPLLVLYAEAKRMENFYK----- 464
N+I C K E+A+ ++++ T ++ L P F V L+ + F +
Sbjct: 305 GNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF--VATLITALCKNDGTITFAQEMLGD 362
Query: 465 LLQQMEKLGFP----VIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDS 520
L + + G VI L R ++ K + L++ S G ++N+++ +
Sbjct: 363 LSGEARRRGIKPFSDVIHSLCRMRNV---KDAKALLLDMISKGPAPGNA---VFNLVVHA 416
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS 580
K G++ +A + + LKPD ++Y++ I + G + +A E + + S
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLS 476
Query: 581 IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC-KSNDAEKVIGV 639
Y L +G CKI E DEA+ L+ + + P Y+ + C K+ D EK +
Sbjct: 477 PVTYHALIRGYCKIEEYDEALKLLNE-MDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL 535
Query: 640 LNEMMQQG 647
EM Q+G
Sbjct: 536 FEEMKQKG 543
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/348 (18%), Positives = 131/348 (37%), Gaps = 48/348 (13%)
Query: 135 VLKVQTNPTLS----FKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDS 190
V++V +P +S +F WA + + + + + + A L +L+
Sbjct: 160 VVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKE 219
Query: 191 QGKPPSEKQFEI-----LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
G+ S + LI + G+ + V+ K +FG P Y ++AL +
Sbjct: 220 IGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTE-EFGFTPNAKTYYLTLEALCK 278
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV--LGRMREKLCRPDV 303
+D A SV + + G+ E ++ C+ G+ +E V L + +EK P
Sbjct: 279 RSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF 338
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
A L+ L DG + +EM D L E
Sbjct: 339 VA--TLITALCKN---DGTITFAQEMLGD---------------------------LSGE 366
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
+ +G + ++ S + V LL D++S G ++N ++
Sbjct: 367 ARRRGI----KPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGD 422
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
++A ++ ++ GL+PD + ++ YA+ M+ ++L + +K
Sbjct: 423 LDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 136/317 (42%), Gaps = 6/317 (1%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++DA +R G L+ A ++ + E G D VT +LV L G+ E + EK
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
D Y L++ ++ G L ++E M V + Y T+I+ G ++++
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+F + G +D IY +++ + K+ L ++ G + YN +++ +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-I 888
Query: 419 CNLNKF-EKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVI 477
C ++ + +L Q + G D + L+ +YAE+ + K + +++ G P+
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 478 DDLARFFSIFVEKKGPIMALE-VFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLF 534
+ K G + E + + E G +S D ++ G+ +K + +
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAG-ISPDSACKRTILKGYMTCGDAEKGILFY 1007
Query: 535 DEINGANLKPDSFSYSI 551
+++ ++++ D F S+
Sbjct: 1008 EKMIRSSVEDDRFVSSV 1024
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 151/350 (43%), Gaps = 40/350 (11%)
Query: 241 DALIRTGHLD---LALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREK 297
+A++ LD L L + KE L+E + ++ K + ++ ++ R
Sbjct: 592 EAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVR---- 647
Query: 298 LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEG 357
DV ++ I++ G LR+ EE AT+I +++E
Sbjct: 648 --EGDVSKAEMIADIIIRLG-----LRMEEE-----------TIATLIAVYGRQHKLKEA 689
Query: 358 ---YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
Y+ E K+ G +++ S+++++V + + L + G + L
Sbjct: 690 KRLYLAAGESKTPG----KSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISIL 745
Query: 415 IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
+ L N K +A + + +++ +E D + L+ EA +++ ++ ++M G
Sbjct: 746 VNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGV 805
Query: 475 PV-IDDLARFFSIFVEKKGPIMALEVFSYLKEKG-YVSVDIYNILMDSLHKVGEMKKALS 532
P I S++ A+E+FS + G Y+ IY ++ K G+M +ALS
Sbjct: 806 PCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALS 865
Query: 533 LFDEINGANLKPDSFSYSIAI-LC-----HVDLGEIKQACECHNKIIEMS 576
LF E+ +KP + SY++ + +C H ++ E+ QA E + + ++S
Sbjct: 866 LFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLS 915
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 158/398 (39%), Gaps = 8/398 (2%)
Query: 212 RGLR-VYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
RG R V + M+ + +P V +Y ++ + G + +A + + E G + + V
Sbjct: 166 RGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVA 225
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
++ + GR ML ++E+ Y ++ L + + +W EM
Sbjct: 226 CGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMV 285
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
++ V P+ Y +++ + G EE F EMKS G + + Y S++ V
Sbjct: 286 EEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWE 345
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
L +D+ S G ++ + KA LF + + D + ++
Sbjct: 346 KAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Query: 451 VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFS-IFVEKKGPIMALEVFSYLKEKGY- 508
+Y + + + ++ E+L + S + + + AL+V +K +
Sbjct: 406 RIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIP 465
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS--IAILCHVDLGEIKQAC 566
+S Y +++ K+ + A F ++ L PD+ S + + + ++LGE +A
Sbjct: 466 LSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGE--KAK 522
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+I+ I YK + CK G + EA L+
Sbjct: 523 GFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/548 (16%), Positives = 209/548 (38%), Gaps = 11/548 (2%)
Query: 149 FHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHS 208
F+ A +++ + + YN + + + H L M +G PP+E + +++ ++
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 304
Query: 209 DAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEER 268
G + +M++ G P Y+ ++ ++ G + A+ +Y+D + G+
Sbjct: 305 KQGFKEEALKAFGEMKS-LGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSN 363
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
T ++ + + L + M D +++RI G ++EE
Sbjct: 364 YTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEE 423
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
++ + D Y + N G V + + + MK++ + R Y +++ + +
Sbjct: 424 TERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQN 483
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
V + + L +G D N+++ LN EKA + + + + D K
Sbjct: 484 VDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKT 542
Query: 449 LLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
+ +Y + + L+ +M + V D+ RF E + + +
Sbjct: 543 AMRVYCKEGMVAEAQDLIVKMGREA-RVKDN--RFVQTLAESMHIVNKHDKHEAVLNVSQ 599
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACEC 568
+ V ++++ K G + + ++ + + +L + + I+ V G++ +A
Sbjct: 600 LDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVIS--SFVREGDVSKAEMI 657
Query: 569 HNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ II + L + ++ EA L + T G + C
Sbjct: 658 ADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRC 717
Query: 629 KSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESD 688
E G+ E ++GC PG V S +++ + G EA + E+ + E D
Sbjct: 718 --GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI--ELD 773
Query: 689 TIVYDEFL 696
T+ Y+ +
Sbjct: 774 TVGYNTLI 781
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 3/254 (1%)
Query: 187 LMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRT 246
L + K P + +I + G Y ++ + K G P + +++AL
Sbjct: 694 LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEK-GCDPGAVTISILVNALTNR 752
Query: 247 GHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAY 306
G A + E ++ + V + L+K + +AG++ E+ RM + Y
Sbjct: 753 GKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 307 TVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKS 366
++ + LD + ++ ++ + D Y +I GG++ E LF EM+
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 367 KGHLIDRAIYGSLVESFVAVNKVGAGFD-LLKDLVSSGYRADLGIYNNLIEGLCNLNKFE 425
KG Y +V+ A +++ D LL+ + +G DL Y LI+ ++F
Sbjct: 873 KGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 426 KAHKLFQVTIQEGL 439
+A K + ++G+
Sbjct: 932 EAEKTITLVKEKGI 945
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 109/597 (18%), Positives = 233/597 (39%), Gaps = 113/597 (18%)
Query: 166 NAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRN 225
+A+A + R D++P+ P+ + L+ +S AG + +EK+ +
Sbjct: 49 HAYALMKSSTYARRVFDRIPQ--------PNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMVLVKGLCQAGRI 284
+ GV +N +++ +G + A+ Y+ D + RVT M ++K G +
Sbjct: 101 RDGVT-----WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 285 DEMLEVLGRMRE-------------------------------KLCRPDVFAYTVLVRIL 313
++ G++ + L + Y L+ L
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 314 VPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDR 373
+ G ++ L+++ M+KD V ++A +I GL+ G +E F+EMK +G +D+
Sbjct: 216 LACGMIEDALQLFRGMEKDSV-----SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 374 AIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQV 433
+GS++ + + + G + ++ + ++ + + + LI+ C A +F
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 434 TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGP 493
Q+ + +S ++V Y + R E K+ M++ G ID +
Sbjct: 331 MKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG---IDPDHYTLGQAISACAN 383
Query: 494 IMALEVFSYLKEKGYVS-----VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFS 548
+ +LE S K S V + N L+ K G++ + LF+E+N D+ S
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN----VRDAVS 439
Query: 549 YSIAILCHVDLGEIKQACECHNKII----------------------------------- 573
++ + + G + + +K++
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 574 -EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
E +PSI Y C+ + G ++EAM + N P + + T++ AC++
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI-----NGMPFPPDAIGWTTLLSACRNKG 554
Query: 633 AEKVIGVLNEMMQQ---GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTE 686
++ E + + P G + S++ + K+ ++ + R+ +RE+ + E
Sbjct: 555 NLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR---GMREKNVKKE 608
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
YN Y +N A +QLP L G +++ H + ++ +++
Sbjct: 65 YNILKY----SNWDSAQEQLPHL----GVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIK 116
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
G K F Y ++D G + SV+ KE G+ + VT+ L+ + +G +
Sbjct: 117 ---GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
D + + MR+ C P V +YT +++L G ++ V++EM + RV P+ Y +
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLV 380
+ L G+ EE +F +M+ G D+A L+
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILI 269
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 181/453 (39%), Gaps = 39/453 (8%)
Query: 126 RVTPSLVAEVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLP 185
R ++ VLK ++ FF+WA + KG+ H+ +Y ++ +
Sbjct: 86 RWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVF 145
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
LM +G + LI S +G ++E+MR+ G +P V Y M L
Sbjct: 146 HLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDN-GCEPTVVSYTAYMKMLFA 204
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
G ++ A VY + + T+ VL++ L G+ +E L++ +M+E +PD A
Sbjct: 205 DGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAA 264
Query: 306 YTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMK 365
+L+ + G RV MK++ V V+ Y + L E L +E+
Sbjct: 265 CNILIAKALKFGETSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLREVN 321
Query: 366 SKGHLIDRAIYGS--------------------LVESFVAVNKVGAGFD-LLKDLVSSGY 404
S H+ ++ S ++ S + + + D LL +
Sbjct: 322 S--HISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNI 379
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
+ D + + +IE C+ + E A F +++ G+ + L+ + + + +
Sbjct: 380 KLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIE 439
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKG----PIMALEVFSYL--KEKGYVSVDIYNILM 518
++++M K + ++ + + G P +A +VF L +KG V Y LM
Sbjct: 440 VVKEMVKAQHSL---GCYQGAMLIHRLGFGRRPRLAADVFDLLPDDQKG---VAAYTALM 493
Query: 519 DSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
D G +KA+ + E+ + P +Y +
Sbjct: 494 DVYISAGSPEKAMKILREMREREIMPSLGTYDV 526
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 172/422 (40%), Gaps = 41/422 (9%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
D F YT ++ I G + V+ MK+ V D + Y ++I +S+ G V+ L+
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 362 KEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNL 421
+EM+ G Y + ++ A +V ++ K+++ S + Y L+E L
Sbjct: 181 EEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVAT 240
Query: 422 NKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLA 481
K E+A +F + G++PD + L+ + ++L M++ G +
Sbjct: 241 GKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENG------VV 294
Query: 482 RFFSIFVEKKGPIMAL--------EVFSYLKEKGYVSVDI-------YNILMDS-----L 521
+ IFVE + A EV S++ + S DI N +S +
Sbjct: 295 LRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVI 354
Query: 522 HKVGEMKKALS----LFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
V MK+ L L +++ N+K DSF S I + D + A + +EM
Sbjct: 355 SSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLAFDYSLEMGI 414
Query: 578 IPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVI 637
+AY L + E+ + + +V++ + S + +IH ++
Sbjct: 415 HLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHS--LGCYQGAMLIHRLGFGRRPRLA 472
Query: 638 GVLNEMM---QQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIVYDE 694
+ +++ Q+G + IS G+ E+A K+ +RER+++ T YD
Sbjct: 473 ADVFDLLPDDQKGVAAYTALMDVYISA----GSPEKAMKILREMREREIMPSLGT--YDV 526
Query: 695 FL 696
L
Sbjct: 527 LL 528
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/522 (20%), Positives = 219/522 (41%), Gaps = 61/522 (11%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
L+ M+ + G+ V++ M+N+ V +N ++ R G+++ AL ++D +
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNR-----DVISWNTMISGYYRNGYMNDALMMFDWMVNE 212
Query: 263 GLDEERVTFMVL---------------VKGLCQAGRIDEMLEV----------LGRMRE- 296
+D + T + + V L + R+ + +EV GRM E
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 297 -----KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
++ R DV +T ++ G+++ L + M+ + V P+ + A++++ +
Sbjct: 273 RFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDA 332
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIY 411
+V +G L + D I SL+ + +V DL + S + G +
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV----DLCFRVFSGASKYHTGPW 388
Query: 412 NNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEK 471
+ +I G A LF+ +E +EP+ ++ LL YA + + + K
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK 448
Query: 472 LGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDI--YNILMDSLHKVGEMK 528
GF D A K G + A ++F+ ++EK + S D+ + L+ G+
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEK-HKSKDVVLWGALISGYGMHGDGH 507
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE-MSCIPSIAAYKCL 587
AL +F E+ + + P+ +++ A+ G +++ ++E + Y C+
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCI 567
Query: 588 TKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSL--TVIHACKSND----AEKVIGVLN 641
L + G +DEA L +T+ P E ++ ++ AC +++ E L
Sbjct: 568 VDLLGRAGRLDEAYNL-------ITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 642 EMMQQGCPPGN-VVCSAVISGMCKYGTIEEARKVFSNLRERK 682
E+ + GN V+ + + + + ++ +E+ R + N+ RK
Sbjct: 621 ELEPEN--TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/498 (19%), Positives = 196/498 (39%), Gaps = 63/498 (12%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLD--EERVTFMVLVKGLCQAGRIDEM---LEV 290
YN ++ +R G A+SV+ +G+ + T+ + K AG + M L V
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA---AGELKSMKLGLVV 139
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
GR+ D + L+ + + G ++ V++ MK DV+++ T+I+G
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN----RDVISWNTMISGYYR 195
Query: 351 GGRVEEGYVLFKEMKSK----------------GHLIDRAIYGSLVESFVAVNKVGAGFD 394
G + + ++F M ++ GHL D + G V V ++G +
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM-GRNVHKLVEEKRLGDKIE 254
Query: 395 LLKDLVSSGY----------------RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEG 438
+ LV+ R D+ + +I G E A +L ++ EG
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 439 LEPDFLSVKPLLVLYAEAKRMENF-----YKLLQQMEKLGFPVIDDLARFFSIFVEKKGP 493
+ P+ +++ L+ + +A ++ + + + QQ+ + I S++ + K
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV----YSDIIIETSLISMYAKCKRV 370
Query: 494 IMALEVFSYLKE--KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
+ VFS + G S I + + L + AL LF + +++P+ + +
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNEL-----VSDALGLFKRMRREDVEPNIATLNS 425
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNV 611
+ + L +++QA H + + + S+ A L K G ++ A +
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 612 TSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEA 671
S + +L + D + V EM++ G P + ++ ++ G +EE
Sbjct: 486 KSKDVVLWGALISGYGMHG-DGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEG 544
Query: 672 RKVFSNLRER-KLLTESD 688
+F + E K L S+
Sbjct: 545 LTLFRFMLEHYKTLARSN 562
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 162/378 (42%), Gaps = 25/378 (6%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P ++ Y ++ L++G + LF E++ +G D +++S + KV G +
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
V +G D + N+L+ +L K E HK+F E + D +S L+ Y
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVF----DEMPQRDVVSWNGLISSYVG 124
Query: 456 AKRMENFYKLLQQMEKLGFPVIDD--LARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDI 513
R E+ + ++M + D+ + S K + ++ ++ + +SV I
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 514 YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII 573
N L+D K G + KA ++FD + N+K ++ + +V G I +A +
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEA----RVLF 236
Query: 574 EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDA 633
E S + + + + G + DEA+ L R C+ P F+ ++++ C A
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFR-CMQTAGIRPDNFVL-VSLLTGCAQTGA 294
Query: 634 ----EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ + G +NE VV +A++ K G IE A +VF ++ER T S T
Sbjct: 295 LEQGKWIHGYINE---NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD--TASWT 349
Query: 690 IVYDEFLIDHMKKKTADL 707
+ ++ M + DL
Sbjct: 350 SLIYGLAMNGMSGRALDL 367
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 176/439 (40%), Gaps = 73/439 (16%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P + +YN+++ +L L+++ + + GL + T V++K + + ++ E +V
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
G + D + L+ + G ++ +V++EM + DV+++ +I+
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP----QRDVVSWNGLISSYVG 124
Query: 351 GGRVEEGYVLFKEMKSKGHL---------------------IDRAIYGSLVESFVAVNKV 389
GR E+ +FK M + +L I IY +V F ++
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 390 G-----------------AGFDLLKD------------LVSSGY------------RADL 408
G A FD ++D VS+G D+
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
++ ++ G N+F++A +LF+ G+ PD + LL A+ +E +
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 469 MEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEM 527
+ + V + K G I ALEVF +KE+ S + L+ L G
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS---WTSLIYGLAMNGMS 361
Query: 528 KKALSLFDEINGANLKPDSFSYSIAILCHVDLGE-IKQACECHNKIIEMSCI-PSIAAYK 585
+AL L+ E+ ++ D+ ++ +A+L + G + + + + + E + P
Sbjct: 362 GRALDLYYEMENVGVRLDAITF-VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 586 CLTKGLCKIGEIDEAMMLV 604
CL LC+ G +DEA L+
Sbjct: 421 CLIDLLCRAGLLDEAEELI 439
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 36/280 (12%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDG--------------- 263
+Y + +F + R+ N ++D + G LD A +V+D ++
Sbjct: 170 IYRFVVTEFEMSVRI--GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTG 227
Query: 264 -LDEERVTF-----------MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
+DE RV F ++ G Q R DE LE+ M+ RPD F L+
Sbjct: 228 RIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLT 287
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
G L+ + + ++RV D + ++ + G +E +F E+K +
Sbjct: 288 GCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER---- 343
Query: 372 DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF-EKAHKL 430
D A + SL+ G DL ++ + G R D + ++ CN F + K+
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA-CNHGGFVAEGRKI 402
Query: 431 FQ-VTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQM 469
F +T + ++P L+ L A ++ +L+ +M
Sbjct: 403 FHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 136/363 (37%), Gaps = 40/363 (11%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ K F+ KQ Y +Y + A L E+M S+G P+ + LI
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
++ + + + E M++ KP VF + ++ + G DL S+ + G+
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMRE------KLC------------------- 299
VT+ ++ G +AG +EM VL M E +C
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 300 -----------RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
+PD+ + +L+ G V + M+K + Y +I
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
GR+E+ +F++MK +G + Y SLV ++ V +L+ +V+S D
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
+N +I +L+ + +PD ++ ++ Y + +Q+
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTA----HGIFDAVQE 482
Query: 469 MEK 471
+EK
Sbjct: 483 LEK 485
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 143/380 (37%), Gaps = 68/380 (17%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
++ +R + +PR Y ++ L D A +++ +GL + L+
Sbjct: 130 IFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVY 189
Query: 279 CQAGRIDEMLEVLGRMRE-KLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
++ +D+ L M+ C+PDVF +TVL+ G D + EM V
Sbjct: 190 GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCS 249
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+ Y TII G G EE + +M G D L
Sbjct: 250 TVTYNTIIDGYGKAGMFEEMESVLADMIEDG-------------------------DSLP 284
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
D+ + + +G Y N G N+ K E + FQ+ G++PD + L++ + +A
Sbjct: 285 DVCT--LNSIIGSYGN---GR-NMRKMESWYSRFQLM---GVQPDITTFNILILSFGKAG 335
Query: 458 RMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNIL 517
+ ++ MEK RFFS+ + YNI+
Sbjct: 336 MYKKMCSVMDFMEK----------RFFSL-----------------------TTVTYNIV 362
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
+++ K G ++K +F ++ +KP+S +Y + + G + + +I+
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDV 422
Query: 578 IPSIAAYKCLTKGLCKIGEI 597
+ + C+ + G++
Sbjct: 423 VLDTPFFNCIINAYGQAGDL 442
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 85/192 (44%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
GR +R + GV+P + +N ++ + + G SV D ++ VT
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ ++++ +AGRI++M +V +M+ + +P+ Y LV G + V ++
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
V D + II G + L+ +M+ + D+ + ++++++ A
Sbjct: 419 NSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFD 478
Query: 391 AGFDLLKDLVSS 402
A +L K ++SS
Sbjct: 479 AVQELEKQMISS 490
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 215 RVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED-GLDEERVTFMV 273
+V + ++M+ ++ KP V YN ++D L R G ++ L V KED + +T+
Sbjct: 195 KVLMILKEMK-EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNT 253
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
++ G+ +A R D L + M + PD+ +YT ++ L GN+ LR+++EMK+ +
Sbjct: 254 VLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ 313
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
+ P V Y +I L G + L E+K+ L
Sbjct: 314 IRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
R+ + NRI+ A T +D L + + KE + +T+ ++ L +AG ++E+L VL
Sbjct: 176 RLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVL 235
Query: 292 GRMREKL-CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
M+E ++ Y ++ + D CL ++ EM + +EPD+++Y +I L
Sbjct: 236 STMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGR 295
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVE 381
G V+E LF EMK + +Y +L++
Sbjct: 296 SGNVKESLRLFDEMKQRQIRPSVYVYRALID 326
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 1/196 (0%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
Y + A I T S+ + E L + ++ + +ID++L +L M+
Sbjct: 145 YLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMK 204
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD-RVEPDVMAYATIITGLSNGGRV 354
E C+PDV Y ++ IL G ++ L V MK+D V +++ Y T++ G+ R
Sbjct: 205 EWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRF 264
Query: 355 EEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNL 414
+ V++ EM G D Y ++++S V L ++ R + +Y L
Sbjct: 265 DMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRAL 324
Query: 415 IEGLCNLNKFEKAHKL 430
I+ L F+ A +L
Sbjct: 325 IDCLKKSGDFQSALQL 340
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 128/300 (42%), Gaps = 49/300 (16%)
Query: 365 KSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKF 424
+S +I + Y +LVE F + +DLL+ L + ++ NL+ LN
Sbjct: 62 ESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDM 121
Query: 425 EKAHKLF-QVTIQEGLEP------------------------------------DFLSVK 447
+ + ++F +V I G EP + +
Sbjct: 122 KLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMN 181
Query: 448 PLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIF--VEKKGPIMA-LEVFSYLK 504
++ +AE ++++ +L++M++ + D+ + S+ + + G + L V S +K
Sbjct: 182 RIIFAFAETRQIDKVLMILKEMKE--WECKPDVITYNSVLDILGRAGLVNEILGVLSTMK 239
Query: 505 EKGYVSVDI--YNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEI 562
E VSV+I YN +++ + K L +++E+ ++PD SY+ I G +
Sbjct: 240 EDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNV 299
Query: 563 KQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTS----GPMEF 618
K++ +++ + PS+ Y+ L L K G+ A+ L D L N +S GP +F
Sbjct: 300 KESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL-SDELKNTSSLDLAGPQDF 358
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 61/121 (50%)
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
AG + V M+ V + YN +++ + + D+ L +Y++ + G++ + +
Sbjct: 225 AGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLL 284
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
++ ++ L ++G + E L + M+++ RP V+ Y L+ L G+ L++ +E+
Sbjct: 285 SYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Query: 330 K 330
K
Sbjct: 345 K 345
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 156/363 (42%), Gaps = 12/363 (3%)
Query: 243 LIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPD 302
L R + AL ++D + GL + L + G I + V MR+K +
Sbjct: 117 LSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKK---EN 173
Query: 303 V--FAYTVLVRILVPQGNLDGCLRVWEEMKKD---RVEPDVMAYATIITGLSNGGRVEEG 357
V Y+++++ + + LR++ E++++ R DV+ Y T I+ V E
Sbjct: 174 VTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYET 233
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEG 417
+++ MK GH+ Y LV FV + D+ ++V++ +I
Sbjct: 234 ERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISA 293
Query: 418 LCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PV 476
K++ A K+FQ +++G++P+ ++ L+ +A ++ +K+ ++ LG P
Sbjct: 294 CTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPD 353
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVD--IYNILMDSLHKVGEMKKALSLF 534
+ + L++F ++ + ++ +YN M S K+G +KA+ L
Sbjct: 354 EYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLL 413
Query: 535 DEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKI 594
E+ G+ L + SY++ I + K A + + + C P+ Y L + C
Sbjct: 414 YEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIW 472
Query: 595 GEI 597
G +
Sbjct: 473 GSL 475
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 130/313 (41%), Gaps = 40/313 (12%)
Query: 165 YNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMR 224
YN R N+ +++ +M G +E + +L+ + GR VY++M
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 225 N----------------------------------KFGVKPRVFLYNRIMDALIRTGHLD 250
N K G+KP + N ++++L + G +
Sbjct: 277 NNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVG 336
Query: 251 LALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVL 309
L VY K G + T+ L+ L +A R +++L++ +R E LC + + Y
Sbjct: 337 LVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTA 396
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGH 369
+ G + +++ EM+ + +Y +I+ + + ++++ M +
Sbjct: 397 MVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDC 456
Query: 370 LIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHK 429
+ Y SLV S + G+ +D ++D++ D+ +YN I G+C +F+ A +
Sbjct: 457 KPNTFTYLSLVRSCIW----GSLWDEVEDILKK-VEPDVSLYNAAIHGMCLRREFKFAKE 511
Query: 430 LFQVTIQEGLEPD 442
L+ + GLEPD
Sbjct: 512 LYVKMREMGLEPD 524
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 174/433 (40%), Gaps = 60/433 (13%)
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
++R + R+A +L + M G P+ + G + + V+E MR K V
Sbjct: 117 LSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTG 176
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLV--KGLCQAGRIDEMLE 289
Y+ ++ A+ + AL ++ + + + + R F V++ + GRI+ + E
Sbjct: 177 HT--YSLMLKAVAEVKGCESALRMFRELERE--PKRRSCFDVVLYNTAISLCGRINNVYE 232
Query: 290 VLGRMREKLCR--------PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
E++ R Y++LV I V G + L V++EM +++ A
Sbjct: 233 T-----ERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAM 287
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
+I+ + + + +F+ M KG + +L+ S KVG F + L S
Sbjct: 288 YAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKS 347
Query: 402 SGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL--EPDFLSVKPLLVLYAEAKRM 459
G++ D +N L+ L N++E +LF + E L ++L +V +
Sbjct: 348 LGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYL-YNTAMVSCQKLGYW 406
Query: 460 ENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMD 519
E KLL +ME G VS YN+++
Sbjct: 407 EKAVKLLYEMEGSGLT---------------------------------VSTSSYNLVIS 433
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIP 579
+ K + K AL +++ + + KP++F+Y ++++ G + E K +E P
Sbjct: 434 ACEKSRKSKVALLVYEHMAQRDCKPNTFTY-LSLVRSCIWGSLWDEVEDILKKVE----P 488
Query: 580 SIAAYKCLTKGLC 592
++ Y G+C
Sbjct: 489 DVSLYNAAIHGMC 501
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
P Y ++ Q +D R+ + M PDV+ ++T+I G RV+ G +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
F EM +G + + Y +L+ F V + A DLL +++S G D ++ ++ GLC+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 421 LNKFEKAHKLFQ 432
+ KA + +
Sbjct: 128 KKELRKAFAILE 139
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
++ + P YN ++D + +D A + D G + VTF L+ G C+A R+D
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 286 EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATII 345
+E+ M + + YT L+ G+LD + EM V PD + + ++
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 346 TGLSNGGRVEEGYVLFKEM-KSKGH 369
GL + + + + + +++ KS+ H
Sbjct: 123 AGLCSKKELRKAFAILEDLQKSEDH 147
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P + Y ++I G RV++ + M SKG D + +L+ + +V G ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
++ G A+ Y LI G C + + A L I G+ PD+++ +L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 456 AKRMENFYKLLQQMEK 471
K + + +L+ ++K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
+T+ ++ G C+ R+D+ +L M K C PDV ++ L+ +D + ++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M + + + + Y T+I G G ++ L EM S G D + ++ + +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 389 VGAGFDLLKDLVSS 402
+ F +L+DL S
Sbjct: 131 LRKAFAILEDLQKS 144
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 172/420 (40%), Gaps = 55/420 (13%)
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKD---RVEPDVMAYATIIT-----GLSNGG 352
P++F++ V +R N ++++M + PD Y + LS+ G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL--LKDLVSSGYRADLGI 410
+ G+VL ++ H+ + +I+ + S + FD ++DLVS
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIH--MFASCGDMENARKVFDESPVRDLVS--------- 224
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV---LYAEAKRMENFYKLLQ 467
+N LI G + + EKA ++++ EG++PD +++ L+ + + R + FY+ ++
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 468 QME-KLGFPVIDDLARFFS----------IF--VEKKGPIMALEVFSYLKEKGYVSVD-- 512
+ ++ P+++ L FS IF +EK+ + + S G + V
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 513 -----------IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
++N ++ + + AL+LF E+ +N KPD + + LG
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
+ H I + S ++A L K G I EA+ + G T + Y+
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH---GIQTRNSL--TYT 459
Query: 622 LTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
+ DA I NEM+ G P + ++S C G I+ R FS ++ R
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 104/536 (19%), Positives = 197/536 (36%), Gaps = 102/536 (19%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
VY++M +K V N ++ ++TG + A ++D D VT+ +L+
Sbjct: 70 VYDEMPHKNTVST-----NTMISGHVKTGDVSSARDLFDAMP----DRTVVTWTILMGWY 120
Query: 279 CQAGRIDEMLEVLGRM-REKLCR-PDVFAYTVLV---RILVPQG---------------- 317
+ DE ++ +M R C PD +T L+ VPQ
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 318 ------------------NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYV 359
LD ++EE+ E D + + T+ITG G E
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIP----EKDSVTFNTLITGYEKDGLYTESIH 236
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
LF +M+ GH + ++++ V ++ G L V++G+ D + N +++
Sbjct: 237 LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF----- 474
++ + LF E E DF+S ++ Y++A + E ++M+ +GF
Sbjct: 297 KHDRVLETRMLF----DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNF 352
Query: 475 ---------------------------PVIDDLARFFSIFVEKKGPIMALE----VFSYL 503
D + + V+ E +F L
Sbjct: 353 PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 504 KEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIK 563
++ VS + L+ + G L LF ++ G+NL+ D +++ + +
Sbjct: 413 PQRTTVS---WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 564 QACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLG-NVTSGPMEFMYSL 622
+ H II + ++ + L K G I +A+ + + N S +L
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-----WNAL 524
Query: 623 TVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
HA + D E IG +M++ G P +V V++ G +E+ + F +
Sbjct: 525 ISAHA-DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAM 579
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/487 (19%), Positives = 212/487 (43%), Gaps = 44/487 (9%)
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLE 289
KP V + N ++ ++ + +S+Y + ++ G+ +R TF ++K +
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFA 133
Query: 290 VLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLS 349
G++ + + L+ G+L + E+ D + +A++++ +G +
Sbjct: 134 FHGKVVRHGFVLNEYVKNALILFHANCGDLG----IASELFDDSAKAHKVAWSSMTSGYA 189
Query: 350 NGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
G+++E LF EM K D+ + ++ + ++ D ++L D+
Sbjct: 190 KRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEM----DSARELFDRFTEKDVV 241
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL---- 465
+N +I G N ++A +F+ G PD +++ LL A +E +L
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Query: 466 -----LQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDIYNILMD 519
+ +G P+ + L ++ K G I A+EVF +K++ + +N L+
Sbjct: 302 LETASVSSSIYVGTPIWNALIDMYA----KCGSIDRAIEVFRGVKDR---DLSTWNTLIV 354
Query: 520 SLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI- 578
L + + ++ +F+E+ + P+ ++ IL G + + + + + +M I
Sbjct: 355 GL-ALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 413
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIG 638
P+I Y C+ L + G+++EA M V ++ P ++ T++ ACK ++
Sbjct: 414 PNIKHYGCMVDMLGRAGQLEEAFMFVE----SMKIEPNAIVWR-TLLGACKIYGNVELGK 468
Query: 639 VLNE---MMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERK-----LLTESDTI 690
NE M++ V+ S + + ++ +++ RK+F + R +K L+ E D
Sbjct: 469 YANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDK 528
Query: 691 VYDEFLI 697
+ +L+
Sbjct: 529 LMMRYLL 535
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/345 (17%), Positives = 138/345 (40%), Gaps = 36/345 (10%)
Query: 145 SFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILI 204
+ + F +Q Y N Y + + A +L + M ++G + + + L+
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 205 RMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGL 264
+S +GR + + E+M++ +P V Y+ ++ + ++ D + D + G+
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 265 DEERVTFMVLVKGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVLVRILVPQGNLDGCL 323
+T+ L+ +A EM L +M E C+PD + +R G ++
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 324 RVWEEMKKDRVEPDV-----------------------------------MAYATIITGL 348
+E+ + +EP++ + Y +I
Sbjct: 313 NCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Query: 349 SNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
G +++ LF+ M+S+ SLV ++ +K +L+ + +S R DL
Sbjct: 373 GRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDL 432
Query: 409 GIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
+N L++ + KF + + ++ ++G +PD ++ + ++ Y
Sbjct: 433 VFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 18/344 (5%)
Query: 335 EPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFD 394
+P+V Y +I L + E+ + LF+EM ++G +++ +Y +LV ++ + A F
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 395 LLKDLVSS-GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
LL+ + SS + D+ Y+ LI+ + F+K L ++G+ P+ ++ L+ Y
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 454 AEAKRMENFYKLLQQME-----KLGFPVIDDLARFFSIFVEKKGPIMALE-VFSYLKEKG 507
+AK L QM K ++ R F G I +E + + G
Sbjct: 267 GKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG----GNGQIEMMENCYEKFQSSG 322
Query: 508 YV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQAC 566
++ +NIL+DS K G KK ++ + + + +Y++ I G++KQ
Sbjct: 323 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 567 ECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH 626
+ PS L + + + D+ ++R + + F L +
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 627 ACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV-----ISGMCKY 665
AE + GVL M ++G P + + ISGM +
Sbjct: 443 GRMEKFAE-MKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTH 485
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 184/446 (41%), Gaps = 61/446 (13%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKED 262
LI M+S G+ V+ M+++ + +N I+ + + G++D A+ + D+ +
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDR-----NLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 263 GLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRP--------------------- 301
GL + VT+ L+ G G + + VL RM+ +P
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 302 --------------DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
DV+ T L+ + + G L V++ M +++A+ ++++G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLVSG 300
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRAD 407
LS +++ L M+ +G D + SL + + K D++ + G +
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 408 LGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQ 467
+ + + G F A K+F +EG+ P+ ++ LL K + L
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL------KILGCLSLLHS 414
Query: 468 QMEKLGFPVIDDL---ARFFSIFVE---KKGPIM-ALEVFSYLKEKGYVSVDIYNILMDS 520
E GF + +L A + V+ K G + A+E+F +K K S +N ++
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLAS---WNCMLMG 471
Query: 521 LHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI-IEMSCIP 579
G ++ ++ F + A ++PD+ +++ + + G +++ + + + IP
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Query: 580 SIAAYKCLTKGLCKIGEIDEAMMLVR 605
+I C+ L + G +DEA ++
Sbjct: 532 TIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 174/430 (40%), Gaps = 94/430 (21%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAG--RGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
M G PS L++ ++ G + + H Y +RN+ V++ ++D I+
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGY-ILRNQLWYD--VYVETTLIDMYIK 272
Query: 246 TGHLDLALSVYD-------------------------------DFKEDGLDEERVTFMVL 274
TG+L A V+D +++G+ + +T+ L
Sbjct: 273 TGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 275 VKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRV 334
G G+ ++ L+V+G+M+EK P+V ++T + GN L+V+ +M+++ V
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 335 EPDVMAYATIIT-----GLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
P+ +T++ L + G+ G+ L K + + D + +LV+ + +
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL-----ICDAYVATALVDMYGKSGDL 447
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
+ ++ + + L +N ++ G + E+ F V ++ G+EPD ++ +
Sbjct: 448 QSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSV 503
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV 509
L + + ++ +K +F + + G I +E S
Sbjct: 504 LSVCKNSGLVQEGWK------------------YFDLMRSRYGIIPTIEHCS-------- 537
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPD-----SFSYSIAILCHVDLGEIK- 563
++D L + G + +A +D I +LKPD +F S I ++L EI
Sbjct: 538 ------CMVDLLGRSGYLDEA---WDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAW 588
Query: 564 ---QACECHN 570
Q E HN
Sbjct: 589 KRLQVLEPHN 598
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 153/371 (41%), Gaps = 45/371 (12%)
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+E +V ++I S G++E +F MK + + + + S++ S+ + V
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAI 175
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
LL ++ G + D+ +N+L+ G + + A + + GL+P S+ LL
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 454 AEAKRMENFYKLLQQMEKLGFPVIDDLAR---FFSIFVE--------KKGPI-MALEVFS 501
AE + KLG + + R ++ ++VE K G + A VF
Sbjct: 236 AEPGHL-----------KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 502 YLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGE 561
+ K V+ +N L+ L +K A +L + +KPD+ +++ + LG+
Sbjct: 285 MMDAKNIVA---WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 562 IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYS 621
++A + K+ E P++ ++ + G K G A+ + M +
Sbjct: 342 PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST 401
Query: 622 LTVIHACKS--NDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMC-----KYGTIEEARKV 674
L I C S + ++V G C N++C A ++ K G ++ A ++
Sbjct: 402 LLKILGCLSLLHSGKEVHGF--------CLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 675 FSNLRERKLLT 685
F ++ + L +
Sbjct: 454 FWGIKNKSLAS 464
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 13/290 (4%)
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
+ D FK DE F L+ LC+ G I++ E + +KL DV + V++
Sbjct: 211 TFDIMDKFKHTPYDE---AFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVILN 266
Query: 312 ILVP-QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHL 370
++ R+W EM + P+ +Y+ +I+ S G + + L+ EMK +G
Sbjct: 267 GWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLA 326
Query: 371 IDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKL 430
+Y SLV + L+K L G + D YN++I LC K + A +
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNV 386
Query: 431 FQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME--KLGFPVIDDLARFFSIFV 488
I E L P + L EA E ++L QM+ LG P +
Sbjct: 387 LATMISENLSPTVDTFHAFL----EAVNFEKTLEVLGQMKISDLG-PTEETFLLILGKLF 441
Query: 489 EKKGPIMALEVFSYLKEKGYVS-VDIYNILMDSLHKVGEMKKALSLFDEI 537
+ K P AL++++ + V+ +Y + L G ++KA ++ E+
Sbjct: 442 KGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 32/205 (15%)
Query: 195 PSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALS 254
P++ + +I S G +Y++M+ + G+ P + +YN ++ L R D A+
Sbjct: 292 PNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR-GLAPGIEVYNSLVYVLTREDCFDEAMK 350
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRID----------------------------- 285
+ E+GL + VT+ +++ LC+AG++D
Sbjct: 351 LMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN 410
Query: 286 --EMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYAT 343
+ LEVLG+M+ P + +++ L + L++W EM + + + Y
Sbjct: 411 FEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLA 470
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKG 368
I GL + G +E+ ++ EMKSKG
Sbjct: 471 TIQGLLSCGWLEKAREIYSEMKSKG 495
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 142/352 (40%), Gaps = 32/352 (9%)
Query: 344 IITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG---FDLLKDLV 400
+I L N + + L ++M + +A++ +++ + A N FD++
Sbjct: 161 MIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMF-LMMDRYAAANDTSQAIRTFDIMDKFK 219
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAH-------KLFQVTIQEGLEPDFLSVKPLLVLY 453
+ Y + L+ LC EKA KLF V + EG +
Sbjct: 220 HTPYDE---AFQGLLCALCRHGHIEKAEEFMLASKKLFPVDV-EGFNVILNGWCNIWTDV 275
Query: 454 AEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYV-SV 511
EAKR + ++M P D + S F + +L ++ +K++G +
Sbjct: 276 TEAKR------IWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGI 329
Query: 512 DIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNK 571
++YN L+ L + +A+ L ++N LKPDS +Y+ I + G++ A
Sbjct: 330 EVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLAT 389
Query: 572 IIEMSCIPSIAAYKCLTKGLC--KIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
+I + P++ + + + K E+ M + D GP E + L + K
Sbjct: 390 MISENLSPTVDTFHAFLEAVNFEKTLEV-LGQMKISDL------GPTEETFLLILGKLFK 442
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
E + + EM + + A I G+ G +E+AR+++S ++ +
Sbjct: 443 GKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 97/235 (41%), Gaps = 33/235 (14%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
++ +M N + + P Y+ ++ + G+L +L +YD+ K+ GL + LV L
Sbjct: 281 IWREMGN-YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
+ DE ++++ ++ E+ +PD Y ++R L G LD V M + + P V
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 339 MAYATIITG--------------LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
+ + +S+ G EE ++L KG + A+
Sbjct: 400 DTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENAL--------- 450
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGL 439
K+ A D + + A+ +Y I+GL + EKA +++ +G
Sbjct: 451 ---KIWAEMDRFEIV------ANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/529 (19%), Positives = 223/529 (42%), Gaps = 45/529 (8%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N S+N +N A ++ +LM + + L++ + G+ ++
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESLF 133
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
KM K V V L + D G +D A +Y+ D++ + ++ GLC+
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQD-----GRIDDACKLYEMIP----DKDNIARTSMIHGLCK 184
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
GR+DE E+ M E+ V +T +V +D ++++ M E ++
Sbjct: 185 EGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVS 236
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+ +++ G GR+E+ LF+ M K + A+ L + + K FD +K+
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG-EIAKARRVFDSMKERN 295
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFE-KAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
+ ++ + I+ N FE +A LF + ++G+ P F ++ +L + A +
Sbjct: 296 DASWQTVIKIHER--------NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 460 ENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE-VFSYLKEKGYVSVDIYNILM 518
+ ++ Q+ + F V +A K G ++ + +F K + ++N ++
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII---MWNSII 404
Query: 519 DSLHKVGEMKKALSLFDEIN-GANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSC 577
G ++AL +F E+ + KP+ ++ + G +++ + + + +
Sbjct: 405 SGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFG 464
Query: 578 I-PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKV 636
+ P A Y C+ L + G +EAM ++ ++T P ++ +++ AC+++ V
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMI----DSMTVEPDAAVWG-SLLGACRTHSQLDV 519
Query: 637 IGVLNEMMQQGCPPGN---VVCSAVISGMCKYGTIEEARKVFSNLRERK 682
+ + + P + ++ S + + ++ + E RK+ RK
Sbjct: 520 AEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/508 (20%), Positives = 202/508 (39%), Gaps = 57/508 (11%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
GRG+ Y V K G++ VF+ + + D + G LD A V+D+ D V
Sbjct: 192 GRGVHGYVV------KSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIP----DRNAVA 241
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGN------------ 318
+ L+ G Q G+ +E + + MR++ P + + G
Sbjct: 242 WNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI 301
Query: 319 -----LDGCLRV-------------WEEMKKDRV-EPDVMAYATIITGLSNGGRVEEGYV 359
LD L + EM DR+ E DV+ + II+G G VE+
Sbjct: 302 VNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIY 361
Query: 360 LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLC 419
+ + M+ + D +L+ + + G ++ + + +D+ + + +++
Sbjct: 362 MCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 420 NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDD 479
A K+F T+ E D + LL YAE+ +L M+ G P
Sbjct: 422 KCGSIVDAKKVFDSTV----EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVI 477
Query: 480 LARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLFDEI 537
+ + + G + A ++F ++ G + I + +M+ + + G ++A+ ++
Sbjct: 478 TWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII---EMSCIPSIAAYKCLTKGLCKI 594
+ L+P++FS ++A+ L + H II + S + SI L K
Sbjct: 538 QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET--SLVDMYAKC 595
Query: 595 GEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVV 654
G+I++A G+ + ++ +A N E I + + G P N+
Sbjct: 596 GDINKA----EKVFGSKLYSELPLSNAMISAYALYGNLKE-AIALYRSLEGVGLKPDNIT 650
Query: 655 CSAVISGMCKYGTIEEARKVFSNLRERK 682
+ V+S G I +A ++F+++ ++
Sbjct: 651 ITNVLSACNHAGDINQAIEIFTDIVSKR 678
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 145/332 (43%), Gaps = 25/332 (7%)
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAG 282
+R+ F + + L + +MD + G + A V+D E L + + L+ ++G
Sbjct: 402 IRHSF--ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL----ILWNTLLAAYAESG 455
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
E L + M+ + P+V + +++ L+ G +D ++ +M+ + P+++++
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKG-----HLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
T++ G+ G EE + ++M+ G I A+ + + + + G+ +++
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY-IIR 574
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
+L S + I +L++ KA K+F + L ++ YA
Sbjct: 575 NLQHSSL---VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYG 627
Query: 458 RMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS--VDIY 514
++ L + +E +G P + S A+E+F+ + K + ++ Y
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHY 687
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDS 546
+++D L GE +KAL L +E+ KPD+
Sbjct: 688 GLMVDLLASAGETEKALRLIEEM---PFKPDA 716
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 142/370 (38%), Gaps = 43/370 (11%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
+M A RT +L L V + + V ++ + G I + +V EK
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK- 439
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
D+ + L+ G LR++ M+ + V P+V+ + II L G+V+E
Sbjct: 440 ---DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
+F +M+S G + + + +++ V L+ + SG R + +
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV-LYAEAKRMENFYKLLQQMEKLGFPVI 477
+L + I+ +S++ LV +YA+
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKC--------------------- 595
Query: 478 DDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEI 537
D+ + +F K Y + + N ++ + G +K+A++L+ +
Sbjct: 596 GDINKAEKVF----------------GSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Query: 538 NGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII-EMSCIPSIAAYKCLTKGLCKIGE 596
G LKPD+ + + + G+I QA E I+ + S P + Y + L GE
Sbjct: 640 EGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGE 699
Query: 597 IDEAMMLVRD 606
++A+ L+ +
Sbjct: 700 TEKALRLIEE 709
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/488 (17%), Positives = 189/488 (38%), Gaps = 20/488 (4%)
Query: 161 NFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVY 220
N ++NA +N + A +L M QG P+ + ++ G G+
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMG-GVEEGKQS 296
Query: 221 EKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQ 280
+ G++ L +++ + G ++ A V+D +++ VT+ +++ G Q
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQ 352
Query: 281 AGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMA 340
G +++ + + MR + + D L+ NL V + E D++
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 341 YATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLV 400
+T++ + G + + +F K D ++ +L+ ++ G L +
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 401 SSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRME 460
G ++ +N +I L + ++A +F G+ P+ +S ++ + E
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Query: 461 NFYKLLQQMEKLG-----FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
L++M++ G F + L+ + G + + L+ VS++
Sbjct: 529 EAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS- 587
Query: 516 ILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEM 575
L+D K G++ KA +F G+ L + + I + G +K+A + + +
Sbjct: 588 -LVDMYAKCGDINKAEKVF----GSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 642
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEK 635
P + G+I++A+ + D + + P Y L V + + EK
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 636 VIGVLNEM 643
+ ++ EM
Sbjct: 703 ALRLIEEM 710
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 301 PDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVL 360
PD+ Y ++++ G+ + EM++ ++P+ ++ +I+G + +E +
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 361 FKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCN 420
MK +G I + Y ++S K LL ++S+G + + Y++LI G CN
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 421 LNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ-MEKLGFPVIDD 479
+ FE+A KLF++ + G +PD L+ + E L ++ MEK P
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 480 LARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYN 515
+ + + A E+ +KEK +V+++N
Sbjct: 365 MKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWN 400
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%)
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
VY +M +G++P + YNR++ +G + S+ + + G+ +F +++ G
Sbjct: 172 RVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISG 231
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPD 337
+ DE+ +VL M+++ V Y + ++ L + + + M ++P+
Sbjct: 232 FYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPN 291
Query: 338 VMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLK 397
+ Y+ +I G N EE LFK M ++G D Y +L+ L K
Sbjct: 292 TVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCK 351
Query: 398 DLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF 431
+ + + I +L+ GL +K E+A +L
Sbjct: 352 ESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 4/225 (1%)
Query: 438 GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMA 496
G+EPD + ++ ++ E+ + Y ++ +ME+ G P S F +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 497 LEVFSYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
+V + +K++G + V YNI + SL K + K+A +L D + A +KP++ +YS I
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 556 HVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
+ + ++A + ++ C P Y L LCK G+ + A+ L ++ +
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 616 MEFMYSLT--VIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAV 658
M SL + K +A+++IG + E + N V +A+
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAAL 406
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 5/260 (1%)
Query: 213 GLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDF-KEDGLDEERVTF 271
LRV+ EK F + V N ++ A + A VY + K G++ + T+
Sbjct: 135 SLRVFRDLEK----FEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 272 MVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKK 331
++K C++G ++ M K +P+ ++ +++ + D +V MK
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 332 DRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGA 391
V V Y I L + +E L M S G + Y L+ F +
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 392 GFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV 451
L K +V+ G + D Y LI LC FE A L + ++++ P F +K L+
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 452 LYAEAKRMENFYKLLQQMEK 471
A+ ++E +L+ Q+++
Sbjct: 371 GLAKDSKVEEAKELIGQVKE 390
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 1/180 (0%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG 247
M+ +G P+ F ++I + V V M+++ GV V YN + +L +
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR-GVNIGVSTYNIRIQSLCKRK 271
Query: 248 HLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYT 307
A ++ D G+ VT+ L+ G C +E ++ M + C+PD Y
Sbjct: 272 KSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYF 331
Query: 308 VLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK 367
L+ L G+ + L + +E + P +++ GL+ +VEE L ++K K
Sbjct: 332 TLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 160/352 (45%), Gaps = 34/352 (9%)
Query: 274 LVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDR 333
LV+ G + EV RM ++ P FA+ L+ G + + ++ +M +D
Sbjct: 133 LVRLYASCGYAEVAHEVFDRMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 334 VEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVA---VNKVG 390
V+PD + ++ G V+ G + +++ +G D + +LV + + K
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 391 AGFDLL--KDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
FD++ KD VS +N+++ G + +A +F++ +Q G+EPD +++
Sbjct: 251 NVFDMIPHKDYVS---------WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISS 301
Query: 449 LL--VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKE 505
+L VL + R + + + + ME V + L +S K+G + A +F + E
Sbjct: 302 VLARVLSFKHGRQLHGWVIRRGME-WELSVANALIVLYS----KRGQLGQACFIFDQMLE 356
Query: 506 KGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY-SIAILCHVDLGEIKQ 564
+ VS +N ++ + K L F++++ AN KPD ++ S+ LC + G ++
Sbjct: 357 RDTVS---WNAIISAHSK---NSNGLKYFEQMHRANAKPDGITFVSVLSLC-ANTGMVED 409
Query: 565 ACECHNKII-EMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGP 615
+ + E P + Y C+ + G ++EA ++ +G + +GP
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMG-LEAGP 460
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
V+E+M G+KP V ++ A G LD A V+ +GL+ E L+
Sbjct: 331 VFEEMCCS-GIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMY 389
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
+ G +D +V EK+ R +V +++ ++ L G L ++ MK++ VEP+
Sbjct: 390 AKCGGLDATRDVF----EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDR-AIYGSLVESFVAVNKVGAGFDLLK 397
+ + ++ G S+ G VEEG +F M + ++ + YG +V+ F N + ++++
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 398 DLVSSGYRADLGIYNNL-----IEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLV- 451
+ + +++ I+ +L I G L KF A ++ + LEPD L+
Sbjct: 506 SMPVA---SNVVIWGSLMSACRIHGELELGKF-AAKRILE------LEPDHDGALVLMSN 555
Query: 452 LYAEAKRMENFYKLLQQME------KLGFPVIDDLARFFSIFV-----EKKGPIMAL--E 498
+YA +R E+ + + ME + G ID + + ++ I A E
Sbjct: 556 IYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDE 615
Query: 499 VFSYLKEKGYVSVDIYNILMD 519
V S LK GYV D ++L+D
Sbjct: 616 VVSKLKLAGYVP-DCGSVLVD 635
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/460 (19%), Positives = 172/460 (37%), Gaps = 60/460 (13%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P ++N + L R+ + Y + G ++ +F+ ++K + + + E +E+
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
G + D F T + + G ++ V++EM DV+ + T+I
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS----HRDVVTWNTMIERYCR 189
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
G V+E + LF+EMK + D I ++V + + + + L+ + R D +
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME 470
L+ + A + F+ L F+S ++ Y++ R+++ + Q E
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNL---FVST-AMVSGYSKCGRLDDAQVIFDQTE 305
Query: 471 KLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKA 530
K + S +VE P ++A
Sbjct: 306 KKDLVCWTTM---ISAYVESDYP----------------------------------QEA 328
Query: 531 LSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKG 590
L +F+E+ + +KPD S I +LG + +A H+ I ++ L
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 591 LCKIGEIDEAMMLVRDCLG-----NVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQ 645
K G +D RD NV S +S + +A + + M Q
Sbjct: 389 YAKCGGLDAT----RDVFEKMPRRNVVS------WSSMINALSMHGEASDALSLFARMKQ 438
Query: 646 QGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLT 685
+ P V V+ G G +EE +K+F+++ + +T
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 162/406 (39%), Gaps = 68/406 (16%)
Query: 168 FAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR-MHSDAGRG-LRVYHVYEKMRN 225
F MN++ DQ+ +++D G+ S KQ ++ ++SD R LR VY K+ +
Sbjct: 204 FVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLS 263
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
G R +I + ++ L Y D + + L QAG +
Sbjct: 264 VLGFARRPQEALQIFNQMLGDRQL------YPDM---------AAYHCIAVTLGQAGLLK 308
Query: 286 EMLEVLGRMREK---------------LCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
E+L+V+ RMR+K + PD+ Y ++ VP V+ E++
Sbjct: 309 ELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELR 368
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVG 390
K+ + P+ Y + + G+ + + F++MKS G Y LV + K+
Sbjct: 369 KNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIE 428
Query: 391 AGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLL 450
+ ++D+ G +Y L LCN ++ A + +V + LE + +PL
Sbjct: 429 EAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDA--MLEVGRMKRLE----NCRPLE 482
Query: 451 VLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS 510
+ F L+ G +DD + +F Y+K+K +
Sbjct: 483 I---------TFTGLIAASLNGGH--VDD----------------CMAIFQYMKDKCDPN 515
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEI---NGANLKPDSFSYSIAI 553
+ N+++ + +A LF+EI +L P+ ++YS +
Sbjct: 516 IGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFML 561
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 9/271 (3%)
Query: 192 GKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDL 251
G P+ + + + + ++G+ RV+ + KM++ G P+ Y ++ AL R G ++
Sbjct: 371 GLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSS-GEAPKAITYKVLVRALWREGKIEE 429
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI-DEMLEVLGRM-REKLCRPDVFAYTVL 309
A+ D ++ G+ + L LC GR D MLEV GRM R + CRP +T L
Sbjct: 430 AVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEV-GRMKRLENCRPLEITFTGL 488
Query: 310 VRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSK-- 367
+ + G++D C+ +++ M KD+ +P++ ++ E LF+E+ S+
Sbjct: 489 IAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKE 547
Query: 368 GHLI-DRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEK 426
HL+ + Y ++E+ + + + +V SGY+ D + +++ K+
Sbjct: 548 THLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSL 607
Query: 427 AHKLFQVTIQEGLEPDFLSVKPLLVLYAEAK 457
F +++G P L LL +A AK
Sbjct: 608 LEHAFDAVLEDGEIPHPLFFTELLC-HATAK 637
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 151/348 (43%), Gaps = 31/348 (8%)
Query: 229 VKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
++P + +YN I++A + T V+ + +++GL T+ + ++ + ++G+ D +
Sbjct: 337 LEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVH 396
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGL 348
+ +M+ P Y VLVR L +G ++ + +M++ V Y + L
Sbjct: 397 DFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCL 456
Query: 349 SNGGRVEEGYVLFKEMKSKGH----------LIDRAIYGSLVESFVAVNKVGAGFDLLKD 398
N GR + + MK + LI ++ G V+ +A+ F +KD
Sbjct: 457 CNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAI------FQYMKD 510
Query: 399 LVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI---QEGLEPDFLSVKPLLVLYAE 455
++G N +++ + F +A +LF+ + + L P+ + +L A
Sbjct: 511 KCD----PNIGTANMMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASAR 566
Query: 456 AKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE--KKGPIMALE-VFSYLKEKGYVSVD 512
+ + E F + Q M G+ + D + S+ +E + G LE F + E G +
Sbjct: 567 SLQWEYFEHVYQTMVLSGYQM--DQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHP 624
Query: 513 IY--NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVD 558
++ +L + K G+ ++A++L + + A+ + ++ H D
Sbjct: 625 LFFTELLCHATAK-GDFQRAITLINTVALASFQISEEEWTDLFEEHQD 671
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/275 (17%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 410 IYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQ 468
+Y L+ L + ++A ++F Q+ L PD + + V +A ++ K++++
Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 469 MEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMK 528
M + + +L + + P++ ++ +YN ++++ + K
Sbjct: 317 MRQKPTKLTKNLRQ------KNWDPVLEPDLV------------VYNAILNACVPTLQWK 358
Query: 529 KALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLT 588
+F E+ L+P+ +Y +A+ ++ G+ + + K+ P YK L
Sbjct: 359 AVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLV 418
Query: 589 KGLCKIGEIDEAMMLVRDC--LGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQ 646
+ L + G+I+EA+ VRD G + +G + + + + + + DA +G + + +
Sbjct: 419 RALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRL--E 476
Query: 647 GCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRER 681
C P + + +I+ G +++ +F ++++
Sbjct: 477 NCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDK 511
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 169/401 (42%), Gaps = 39/401 (9%)
Query: 219 VYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
+ +MR+ G++P F Y+ I+ LD ++ + G ++ LV
Sbjct: 312 TFLEMRS-LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 279 --CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP 336
C A + E V G M P+V ++T L+ LV G + C + EM K VEP
Sbjct: 371 MKCSASEV-EASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 337 DVMAYATII---TGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGF 393
+V+ + ++ + L + RV E + G ++ + SLV+++ + KV +
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV---VGNSLVDAYASSRKVDYAW 482
Query: 394 DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLY 453
++++ + R D Y +L+ L K E A + +G+ D LS+ +
Sbjct: 483 NVIRSM----KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 454 AEAKRMENFYKLLQQMEKLGF----PVIDDLARFFSIFVEKKGPIM-ALEVFSYLKEKGY 508
A +E L K GF V++ L +S K G + A +VF +
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYS----KCGSLEDAKKVFEEIATPDV 594
Query: 509 VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI-LCH----VDLGEIK 563
VS +N L+ L G + ALS F+E+ +PDS ++ I + C DLG
Sbjct: 595 VS---WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG--L 649
Query: 564 QACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
+ + KI + P + Y L L + G ++EA +V
Sbjct: 650 EYFQVMKKIYNIE--PQVEHYVHLVGILGRAGRLEEATGVV 688
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 172/417 (41%), Gaps = 56/417 (13%)
Query: 231 PRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEV 290
P +FLYN +++ + L ++ ++ GL TF +++K +A +++
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 291 LGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSN 350
+ + DV A T L+ I G L+ ++++E+ DR V+ + + +G +
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI-PDR---SVVTWTALFSGYTT 189
Query: 351 GGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
GR E LFK+M G D ++ + V V + +G ++K + + + +
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE----AKRMENFYKLL 466
L+ K EKA +F + E D ++ ++ YA + +E F ++L
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMV----EKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 467 QQ-----------------------MEKLGFPVIDDLARFFSIFVEK-------KGPIMA 496
Q+ + + G +ID ++F+ K MA
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 497 --LEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAIL 554
EVF +KEK V I N + L K G +K + ++F + + PD ++ + +L
Sbjct: 366 RGFEVFKEMKEKDIV---IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF-LGLL 421
Query: 555 CH-VDLGEIKQACECHNKIIEMSCI----PSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
C V G I+ N I SC+ ++ Y C+ + G +D+A L+ D
Sbjct: 422 CGCVHAGLIQDGLRFFNAI---SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 156/391 (39%), Gaps = 38/391 (9%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P++ Y ++I G N E LF ++ G + + ++++ + G DL
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAE 455
+V G+ D+ +L+ + AHKLF E + ++ L Y
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLF----DEIPDRSVVTWTALFSGYTT 189
Query: 456 AKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKE-----KGYV 509
+ R L ++M ++G P + + S V + Y++E +V
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 510 SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECH 569
+ N+ K G+M+KA S+FD + ++ D ++S I + K+ E
Sbjct: 250 RTTLVNLYA----KCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 570 NKIIEMSCIP---SIAAY--KCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTV 624
++++ + P SI + C + G +GE +++ + L N+ FM + +
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNL------FMANALI 355
Query: 625 IHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLL 684
K + V EM ++ V+ +A ISG+ K G ++ + VF + KL
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDI----VIMNAAISGLAKNGHVKLSFAVFG--QTEKLG 409
Query: 685 TESDTIVYDEFLIDHMKKKTADLVMSGLKFF 715
D + L + A L+ GL+FF
Sbjct: 410 ISPDGSTFLGLLCGCVH---AGLIQDGLRFF 437
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 125/321 (38%), Gaps = 8/321 (2%)
Query: 150 HWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSD 209
WAE N + A + N H ++D + S + LI +H+
Sbjct: 340 EWAEL---LEPNRVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAK 396
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
V + +KM ++ G+ P + ++ ++G+ + A +++ K GL +
Sbjct: 397 ENHIEDVERILKKM-SQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEK 455
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
+ ++ G AG+ ++ M+ K + Y L+R G+ +G + M
Sbjct: 456 IYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSM 515
Query: 330 KKDRVEP-DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
+ P AY+ + G+V++ F EM+ GH D +LV ++ N
Sbjct: 516 QYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENS 575
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
+ LL L G + Y L++ + NL E+A +L Q G P F
Sbjct: 576 LDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPFELQVS 635
Query: 449 LLVLYAEAKRMENFYKLLQQM 469
L +Y+ + N K LQ +
Sbjct: 636 LCCMYSGVR---NEKKTLQAL 653
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 156/381 (40%), Gaps = 36/381 (9%)
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGG-----RVEEGYVLFKEMKSKGHLIDRAI 375
G L W E+ +EP+ + + +I L G +V EG + E + D
Sbjct: 336 GLLAEWAEL----LEPNRVDWIALINQLREGNTHAYLKVAEG--VLDEKSFNASISD--- 386
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
Y L+ N + +LK + +G D+ L+ FE+A + F+
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 436 QEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQME----KLGFPVIDDLARFFSIFVEKK 491
GL PD + +++ Y A + + +L+++M+ K V L R ++ +
Sbjct: 447 SYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDAN 506
Query: 492 GPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
G Y + G +S + Y++ +++ K G++ KA S FDE+ KPD I
Sbjct: 507 GAAGISSSMQYASD-GPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDD--KCI 563
Query: 552 AILCHVDLGE------IKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
A L GE ++ + IE+ I Y L + +G I+EA L+
Sbjct: 564 ANLVRAYKGENSLDKALRLLLQLEKDGIEIGVI----TYTVLVDWMANLGLIEEAEQLLV 619
Query: 606 DCLGNVTSGPMEFMYSLTVIHACKSNDAE--KVIGVLNEMMQQGCPPGNVVCSAVISGMC 663
+ P E SL +++ N+ + + +GVL Q P VIS +
Sbjct: 620 KISQLGEAPPFELQVSLCCMYSGVRNEKKTLQALGVLEAKRDQMGPNE---FDKVISALK 676
Query: 664 KYGTIEEARKVFSNLRERKLL 684
+ G ++AR+++ + RK L
Sbjct: 677 RGGFEKDARRMYKYMEARKFL 697
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 126/296 (42%), Gaps = 6/296 (2%)
Query: 264 LDEERVTFMVLVKGLCQAGRIDEMLEVL-GRMREKLCRPDVFAYTVLVRILVPQGNLDGC 322
L+ RV ++ L+ L + G L+V G + EK + Y+ L+ I + +++
Sbjct: 345 LEPNRVDWIALINQL-REGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDV 403
Query: 323 LRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVES 382
R+ ++M ++ + PD++ ++ S G E F+ +KS G D IY +++
Sbjct: 404 ERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILG 463
Query: 383 FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPD 442
+V K G L+K++ + +A +Y L+ + A + P
Sbjct: 464 YVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPL 523
Query: 443 FLSVKPLLV-LYAEAKRMENFYKLLQQMEKLGFPVIDD-LARFFSIFVEKKGPIMALEVF 500
L V Y +A +++ +M KLG D +A + + AL +
Sbjct: 524 SFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583
Query: 501 SYLKEKGY-VSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
L++ G + V Y +L+D + +G +++A L +I+ P F +++ C
Sbjct: 584 LQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP-PFELQVSLCC 638
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 141/375 (37%), Gaps = 16/375 (4%)
Query: 128 TPSLVAEVLKVQTNP-TLSFKFFHWAEKQKGYHHNFASYNAFA-YCMNRNNHHRAADQLP 185
P L+ + L + + F W + + H + + F Y R + + +
Sbjct: 108 NPDLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIIS 167
Query: 186 ELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIR 245
+ G E + L+R AGR +V +EKM N +G+K ++ L
Sbjct: 168 KYKGIAGGKTLESAIDRLVR----AGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCE 223
Query: 246 TGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFA 305
GH +A + + + +E + + L+ G C A ++DE + G M A
Sbjct: 224 KGHASIAEKMVKNTANEIFPDENICDL-LISGWCIAEKLDEATRLAGEMSRGGFEIGTKA 282
Query: 306 YTV-------LVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
Y + L R P +V EM+ V + + +I L R EE
Sbjct: 283 YNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAM 342
Query: 359 VLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGI--YNNLIE 416
LF M G D Y L+ S ++G G +++ + S+GY L Y ++
Sbjct: 343 TLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLK 402
Query: 417 GLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPV 476
LC + + E A +F+ G +P + L+ ++ L ++ K G V
Sbjct: 403 ILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAV 462
Query: 477 IDDLARFFSIFVEKK 491
R F++KK
Sbjct: 463 SPKEYRVDPRFMKKK 477
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 166 NAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIR-----MHSDAGRGLRVYHV- 219
N + M + AA ++ E + +G P+ +E+++ + + + RG+ + V
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 220 -YEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGL 278
KM +K G+KP+ +N ++ A + A+ ++ ++G +++ L+ L
Sbjct: 445 LLNKMEDK-GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSAL 503
Query: 279 CQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDV 338
+ DE V M + P+++AYT + +L Q + + +EM +EP V
Sbjct: 504 EKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSV 563
Query: 339 MAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
+ + +I+G + G Y F MKS+ + Y L+E+ K ++L
Sbjct: 564 VTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 11/253 (4%)
Query: 203 LIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLY-------NRIMDALIRTGHLDLALSV 255
LI + A + +YE + ++ G +P Y N ++ A + G + +
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDE-GPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRL 445
Query: 256 YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVP 315
+ ++ GL +R + ++ +A +++ M + +P V +Y L+ L
Sbjct: 446 LNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
Query: 316 QGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAI 375
D RVW M K +EP++ AY T+ + L+ + L KEM SKG
Sbjct: 506 GKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVT 565
Query: 376 YGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTI 435
+ +++ G ++ + S + Y LIE L N K A++L
Sbjct: 566 FNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQ 625
Query: 436 QEGLEPDFLSVKP 448
EGL+ LS KP
Sbjct: 626 NEGLK---LSSKP 635
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 129/304 (42%), Gaps = 10/304 (3%)
Query: 170 YCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGV 229
+ + +N +L MDS G PS ++ E LI + + +Y+++R +F
Sbjct: 319 WLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFS- 377
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT-------FMVLVKGLCQAG 282
+ + + N ++ + + AL +Y+D ++G + ++ F +L+ + G
Sbjct: 378 EISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRG 437
Query: 283 RIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
+ +L +M +K +P + ++ +++++ M + +P V++Y
Sbjct: 438 IWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYG 497
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
+++ L G +E + ++ M G + Y ++ K LLK++ S
Sbjct: 498 ALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASK 557
Query: 403 GYRADLGIYNNLIEGLCNLNKFEK-AHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN 461
G + +N +I G C N A++ F E +EP+ ++ + L+ A +
Sbjct: 558 GIEPSVVTFNAVISG-CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRL 616
Query: 462 FYKL 465
Y+L
Sbjct: 617 AYEL 620
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 96/239 (40%), Gaps = 6/239 (2%)
Query: 158 YHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVY 217
Y + +N ++ R +L M+ +G P + + ++ S A
Sbjct: 419 YELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAI 478
Query: 218 HVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKG 277
+++ M + G KP V Y ++ AL + D A V++ + G++ + +
Sbjct: 479 QIFKAMVDN-GEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASV 537
Query: 278 LCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVW-EEMKKDRVEP 336
L + + + +L M K P V + ++ G L G W MK + VEP
Sbjct: 538 LTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNG-LSGVAYEWFHRMKSENVEP 596
Query: 337 DVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
+ + Y +I L+N + Y L + +++G + Y ++V+S GA DL
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS---AETYGATIDL 652
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 260 KEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNL 319
+E +D + + +++ GLC+AG+ DE + + +PDV Y +++R +L
Sbjct: 6 RESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF----SSL 61
Query: 320 DGCLRVWEEMKKDRVEPDVMAYATIITGLS----------------------NG----GR 353
+++ EM + + PD + Y ++I GL NG R
Sbjct: 62 GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATR 121
Query: 354 VEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNN 413
V++G LF EM +G + + Y +L+ F V D+ +++VS+G + + +
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 414 LIEGLCNLNKFEKA 427
++ LC+ + KA
Sbjct: 182 ILPQLCSRKELRKA 195
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 19/214 (8%)
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
+++ M++ ++ D Y II GL G+ +E +F + G D Y ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--- 57
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
+ +G L +++ G D YN++I GLC NK +A K +
Sbjct: 58 -FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCS 107
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSI---FVEKKGPIMALEVFS 501
+ L+ Y +A R+++ L +M + G ++ ++ + ++ F + AL++F
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRG--IVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 502 YLKEKGYVSVDI-YNILMDSLHKVGEMKKALSLF 534
+ G S I + ++ L E++KA+++
Sbjct: 166 EMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 174/416 (41%), Gaps = 51/416 (12%)
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
+++ N ++ R G +D+A ++D E + V++ ++ ++ E ++L
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
RM + + + + GN G L M+ V +A + S+ G
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 353 RVEEGYV---LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
++ G V L S H ID + SL+ + + + F + + + ++ L
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANS----LS 389
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN-----FYK 464
+N++I G + E+ L + + G P+ +++ +L L+A +++ Y
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE-VFSYLKEKGYVSVDIYNILMDSLHK 523
L +Q K + + L ++ K G I+A + VF ++++ V+ Y L+D +
Sbjct: 450 LRRQSYKDCLILWNSLVDMYA----KSGEIIAAKRVFDSMRKRDKVT---YTSLIDGYGR 502
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS--- 580
+G+ + AL+ F +++ + +KPD HV + + AC N + E + +
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPD----------HVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 581 --------IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ Y C+ C+ G +D+A RD + P M + T++ AC
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKA----RDIFHTIPYEPSSAMCA-TLLKAC 603
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 174/416 (41%), Gaps = 51/416 (12%)
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
+++ N ++ R G +D+A ++D E + V++ ++ ++ E ++L
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSE----RDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
RM + + + + GN G L M+ V +A + S+ G
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIG 334
Query: 353 RVEEGYV---LFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLG 409
++ G V L S H ID + SL+ + + + F + + + ++ L
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDN-VRNSLITMYSRCSDLRHAFIVFQQVEANS----LS 389
Query: 410 IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMEN-----FYK 464
+N++I G + E+ L + + G P+ +++ +L L+A +++ Y
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 465 LLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE-VFSYLKEKGYVSVDIYNILMDSLHK 523
L +Q K + + L ++ K G I+A + VF ++++ V+ Y L+D +
Sbjct: 450 LRRQSYKDCLILWNSLVDMYA----KSGEIIAAKRVFDSMRKRDKVT---YTSLIDGYGR 502
Query: 524 VGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPS--- 580
+G+ + AL+ F +++ + +KPD HV + + AC N + E + +
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPD----------HVTMVAVLSACSHSNLVREGHWLFTKME 552
Query: 581 --------IAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHAC 628
+ Y C+ C+ G +D+A RD + P M + T++ AC
Sbjct: 553 HVFGIRLRLEHYSCMVDLYCRAGYLDKA----RDIFHTIPYEPSSAMCA-TLLKAC 603
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/585 (19%), Positives = 232/585 (39%), Gaps = 66/585 (11%)
Query: 134 EVLKVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYCMNRNNHHRAADQLPELMDSQGK 193
++ Q N ++ + E Q+G N +++A R Q+ + G
Sbjct: 84 QIFARQNNLEVALTILDYLE-QRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 194 PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTG--HLDL 251
+E L+ M++ G V+++ V+ +N ++ + +G
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDE-----STSSNVYSWNALLRGTVISGKKRYQD 197
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVR 311
LS + + +E G+D + + K A + + L+ + VF T LV
Sbjct: 198 VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVD 257
Query: 312 ILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLI 371
+ G + RV++E+ VE D++ + +I GL++ R E LF+ M S+ +
Sbjct: 258 MYFKCGKVGLARRVFDEI----VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIY 313
Query: 372 -DRAIYGSLVESFVAVNKVGAGFDL-------------------LKDL------VSSGYR 405
+ I +++ V + G ++ L DL ++SG R
Sbjct: 314 PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 406 ADLG-------IYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR 458
G + L+ G +F++A + QEG PD +++ +L + AE +
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRA 433
Query: 459 MENFYKL-LQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNIL 517
++ ++ ++ L P + + ++ + P + +F L+++ +V + +
Sbjct: 434 IKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR---NVKAWTAM 490
Query: 518 MDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKII--EM 575
+D + +++ + +F + + +PDS + + DL +K E H I+ E
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 576 SCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLT---VIHACKSND 632
IP ++A G C G++ A N + + SLT +I A N+
Sbjct: 551 ESIPFVSARIIKMYGKC--GDLRSA---------NFSFDAVAVKGSLTWTAIIEAYGCNE 599
Query: 633 A-EKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFS 676
I +M+ +G P +AV+S + G ++EA + F+
Sbjct: 600 LFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 154/400 (38%), Gaps = 12/400 (3%)
Query: 201 EILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFK 260
E+L R+ + GL+ ++ P + + + L R + D A ++ + +
Sbjct: 71 EVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWALMAEVR 130
Query: 261 EDGLDEERVTFM-VLVKGLCQAGRIDEMLEVLGRMREKLCRPD--VFAYTVLVRILVPQG 317
+D + M +L+ + + G +E LE +M +++ R V + +L+R +
Sbjct: 131 KDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTER 190
Query: 318 NLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYG 377
+ ++E++ R PDV ++ G G V + + EM +G + YG
Sbjct: 191 EMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYG 249
Query: 378 SLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQE 437
++ F G L +D+ + + I LI G KA +LF +
Sbjct: 250 IRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKR 309
Query: 438 GLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFV-----EKKG 492
GL PD + L+ + + K++++ME+ G + D F S+F+ ++ G
Sbjct: 310 GLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG--IEPDSVTFHSMFIGMMKSKEFG 367
Query: 493 PIMALEVFSYLKEKGYV-SVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSI 551
E + +KE+ V +LM GE+ L L+ + P + +
Sbjct: 368 FNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALEL 427
Query: 552 AILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL 591
A EC + +E S Y+ L L
Sbjct: 428 LTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 158/401 (39%), Gaps = 43/401 (10%)
Query: 116 PVVTELSKLRRVTPSLVAEVL----KVQTNPTLSFKFFHWAEKQKGYHHNFASYNAFAYC 171
P++ + L ++P V+EVL +N + +FF ++ K S+ +
Sbjct: 53 PILAKHIPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHI 112
Query: 172 MNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKMRNKFGVKP 231
+ R R DQ LM K + L+ S + ++ KFG
Sbjct: 113 LAR---MRYFDQAWALMAE-----VRKDYPNLLSFKSMSILLCKI--------AKFGS-- 154
Query: 232 RVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVL 291
Y ++A ++ + ++ K+ G+DE F +L++ C + E +
Sbjct: 155 ----YEETLEAFVK-----MEKEIFR--KKFGVDE----FNILLRAFCTEREMKEARSIF 199
Query: 292 GRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNG 351
++ + PDV +L+ G++ + EM K +P+ + Y I G
Sbjct: 200 EKLHSRF-NPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 352 GRVEEGYVLFKEMKSKGHLIDRAIYGSLVE-SFVAVNKVGAGFDLLKDLVSSGYRADLGI 410
E LF++M I I +L+ S VA NK+ A L ++ G D G
Sbjct: 259 RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKAR-QLFDEISKRGLTPDCGA 317
Query: 411 YNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKR--MENFYKLLQQ 468
YN L+ L A K+ + ++G+EPD ++ + + ++K + Q+
Sbjct: 318 YNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQK 377
Query: 469 M-EKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
M E+ P + +F + L+++ Y+ EKGY
Sbjct: 378 MKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 511 VDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHN 570
VD +NIL+ + EMK+A S+F++++ + PD + +I +L + G++ ++
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 571 KIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK- 629
++++ P+ Y G CK EA+ L D + + T+IH
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM--DRLDFDITVQILTTLIHGSGV 292
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDT 689
+ + K + +E+ ++G P +A++S + K G + A KV + E+ + E D+
Sbjct: 293 ARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI--EPDS 350
Query: 690 IVYDEFLIDHMKKK 703
+ + I MK K
Sbjct: 351 VTFHSMFIGMMKSK 364
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 124/264 (46%), Gaps = 7/264 (2%)
Query: 269 VTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEE 328
VT+ + + ++ +V + +E+ PD Y+VL + N++ +E
Sbjct: 232 VTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKE 291
Query: 329 MKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNK 388
M+K + + +AYA++I+ +N G + + +K++KS ++ A Y S++ + V + +
Sbjct: 292 MEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGE 351
Query: 389 VGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKP 448
L + S D I N ++ N ++ K ++ +++G+ P + + +
Sbjct: 352 FEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEI 411
Query: 449 LLVLYAEAKRMEN----FYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALE-VFSYL 503
L Y + K ME F K + ++K V L + +E++G + E + + L
Sbjct: 412 LTWAYLKRKDMEKVLDCFGKAIDSVKKWTVNV--RLVKGACKELEEQGNVKGAEKLMTLL 469
Query: 504 KEKGYVSVDIYNILMDSLHKVGEM 527
++ GYV+ +YN L+ + K GEM
Sbjct: 470 QKAGYVNTQLYNSLLRTYAKAGEM 493
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 407 DLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLL 466
D+ YN + + N E A K++ +E L PD+++ L LYA+ +E L
Sbjct: 230 DIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLAL 289
Query: 467 QQMEKL----GFPVIDDLARFFSIFVEKKGPIMALE----VFSYLKEKGYVSVDIYNILM 518
++MEKL L + +K G + + F + + Y+S ++
Sbjct: 290 KEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLS------MI 343
Query: 519 DSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCI 578
++ K+GE ++A L+DE + D+ ++ + +++ E+ + + +I+E
Sbjct: 344 SAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGIN 403
Query: 579 PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIH-ACK 629
PS + ++ LT K ++++ + DC G ++ ++ ++ ACK
Sbjct: 404 PSYSTWEILTWAYLKRKDMEKVL----DCFGKAIDSVKKWTVNVRLVKGACK 451
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 160/391 (40%), Gaps = 34/391 (8%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQA-GRIDE 286
G + F + + A +L L ++ GL ++ +V + C A G +D+
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDD 323
Query: 287 MLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDG-CLRVWEEM-KKDRVEPDVMAYATI 344
+V RM + V ++T L+ + NL + ++ EM + VEP+ +++
Sbjct: 324 CRKVFDRMEDH----SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV---GAGFDLL--KDL 399
N G + + +G + ++ S++ FV +++ F+ L K+L
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 400 VSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
VS YN ++G C FE+A KL + L + LL A +
Sbjct: 440 VS---------YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 460 ENFYKLLQQMEKLGF----PVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDIY 514
++ Q+ KLG PV + L +S K G I A VF++++ + +S +
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYS----KCGSIDTASRVFNFMENRNVIS---W 543
Query: 515 NILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIE 574
++ K G + L F+++ +KP+ +Y + +G + + N + E
Sbjct: 544 TSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYE 603
Query: 575 MSCI-PSIAAYKCLTKGLCKIGEIDEAMMLV 604
I P + Y C+ LC+ G + +A +
Sbjct: 604 DHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 107/539 (19%), Positives = 214/539 (39%), Gaps = 76/539 (14%)
Query: 223 MRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDE-ERVTFMVLVKGLCQA 281
++++ V R+ + +R++ + G L A+S D DG+ + VTF L+K +A
Sbjct: 16 IKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRA 75
Query: 282 GRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAY 341
V R+ E PD Y L+ + G+ V+E M++ + DV+++
Sbjct: 76 RDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSW 134
Query: 342 ATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVS 401
+ ++ N GR + +F E G + + Y +++ + + VG G L L+
Sbjct: 135 SAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194
Query: 402 SG-YRADLGIYNNLIEGLC-NLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRM 459
+G + +D+ + +LI+ N FE A+K+F + + L + + + + +
Sbjct: 195 TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 460 ENFYKL-LQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVS------VD 512
F + L E F L+ FS E + + ++ S+ G V VD
Sbjct: 255 RFFLDMVLSGFESDKFT----LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVD 310
Query: 513 IY-----NILMDSLHKV-----------------GEMK------KALSLFDE-INGANLK 543
+Y + +D KV G MK +A++LF E I +++
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVE 370
Query: 544 PDSFSYSIAILCHVDLGE---------------IKQACECHNKIIEMSCIP--------- 579
P+ F++S A +L + + N +I M
Sbjct: 371 PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRA 430
Query: 580 -------SIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSND 632
++ +Y G C+ ++A L+ + + G F ++ +
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE-ITERELGVSAFTFASLLSGVANVGS 489
Query: 633 AEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNLRERKLLTESDTIV 691
K + +++++ G VC+A+IS K G+I+ A +VF+ + R +++ + I
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/495 (18%), Positives = 210/495 (42%), Gaps = 66/495 (13%)
Query: 188 MDSQGKPPSEKQFEILIRMHSDAGRGLRV-YHVYEKMRNKF---GVKPRVFLYNRIMDAL 243
M S+ P+E F ++ +A RG V + V E++ + G++ + N ++D
Sbjct: 177 MVSENVTPNEGTFSGVL----EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLY 232
Query: 244 IRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDV 303
R G +DLA V+D + ++ +++ ++ GL + C +
Sbjct: 233 SRNGFVDLARRVFDGLRL----KDHSSWVAMISGLSK----------------NECEAEA 272
Query: 304 FAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKE 363
+R++ +M + P A++++++ +E G L
Sbjct: 273 -------------------IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 364 MKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNK 423
+ G D + +LV + + + + + + S+ + D YN LI GL
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISA----EHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 424 FEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDL-AR 482
EKA +LF+ +GLEPD ++ L+V + + +L KLGF + +
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 483 FFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANL 542
+++ + AL+ Y E +V ++N+++ + + +++ + +F ++ +
Sbjct: 430 LLNLYAKCADIETALD---YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 543 KPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKC--LTKGLCKIGEIDEA 600
P+ ++Y + + LG+++ + H++II+ + + AY C L K+G++D A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLNAYVCSVLIDMYAKLGKLDTA 544
Query: 601 M-MLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGNVVCSAVI 659
+L+R +V S ++ + + N +K + +M+ +G V + +
Sbjct: 545 WDILIRFAGKDVVS------WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAV 598
Query: 660 SGMCKYGTIEEARKV 674
S ++E +++
Sbjct: 599 SACAGLQALKEGQQI 613
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/507 (18%), Positives = 209/507 (41%), Gaps = 93/507 (18%)
Query: 233 VFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLG 292
V +N ++ I+ + A +V++ E + V++ +VKG Q G + E +
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFW 134
Query: 293 RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGG 352
RM E+ + ++TV+ L+ G +D ++++ M DV+A +I GL G
Sbjct: 135 RMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMPV----KDVVASTNMIGGLCREG 186
Query: 353 RVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAG---FDLLKDLVSSGYRADLG 409
RV+E ++F EM+ + + + +++ + N+V F+++ + + + L
Sbjct: 187 RVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLL 242
Query: 410 IY------------------------NNLIEGLCNLNKFEKAHKLFQV------------ 433
Y N +I G + + KA ++F +
Sbjct: 243 GYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 434 -------------------TIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGF 474
++G+ P F S+ +L + A ++ ++ + + F
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 475 PVIDDL---ARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKAL 531
DD+ + +++V+ + A VF K + ++N ++ G ++AL
Sbjct: 363 D--DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII---MWNSIISGYASHGLGEEAL 417
Query: 532 SLFDEINGANLKPDSFSYSIAILCHVD-LGEIKQACECHNKIIEMSCI-PSIAAYKCLTK 589
+F E+ + P+ + IAIL G++++ E + C+ P++ Y C
Sbjct: 418 KIFHEMPSSGTMPNKVTL-IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 590 GLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCP 649
L + G++D+AM L+ ++T P ++ ++ ACK++ + V + + + P
Sbjct: 477 MLGRAGQVDKAMELIE----SMTIKPDATVWG-ALLGACKTHSRLDLAEVAAKKLFENEP 531
Query: 650 PGN---VVCSAVISGMCKYGTIEEARK 673
V+ S++ + K+G + RK
Sbjct: 532 DNAGTYVLLSSINASRSKWGDVAVVRK 558
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 202 ILIRMHSDAGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKE 261
+L+ M+ G ++ V+++ +K + ++N I+ G + AL ++ +
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSSK-----DIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 262 DGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLC-RPDVFAYTVLVRILVPQGNLD 320
G +VT + ++ AG+++E LE+ M K C P V Y+ V +L G +D
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVD 485
Query: 321 GCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEM 364
+ + E M ++PD + ++ R++ V K++
Sbjct: 486 KAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKL 526
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 169/412 (41%), Gaps = 35/412 (8%)
Query: 211 GRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVT 270
G+ L + V +M +F+ N ++D + G +D A +V+ + ++ V+
Sbjct: 248 GKQLHCFAVTSEMIQN------MFVGNCLVDMYAKCGMMDEANTVFSNMSV----KDVVS 297
Query: 271 FMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK 330
+ +V G Q GR ++ + + +M+E+ + DV ++ + +G L V +M
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 331 KDRVEPDVMAYATIITGLSNGGRVEEGYVLF-------KEMKSKGHLIDRAIYGSLVESF 383
++P+ + ++++G ++ G + G + +++ GH + + L++ +
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 384 VAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE--P 441
KV + L S D+ + +I G KA +L +E + P
Sbjct: 418 AKCKKVDTARAMFDSL--SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 442 DFLSVKPLLVLYAEAKRME-----NFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIM- 495
+ ++ LV A + + Y L Q + V + L ++ K G I
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA----KCGSISD 531
Query: 496 ALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILC 555
A VF + K V+ + LM G ++AL +FDE+ K D + + +
Sbjct: 532 ARLVFDNMMAKNEVT---WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 556 HVDLGEIKQACECHNKIIEMSCI-PSIAAYKCLTKGLCKIGEIDEAMMLVRD 606
G I Q E N++ + + P Y CL L + G ++ A+ L+ +
Sbjct: 589 CSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 185/431 (42%), Gaps = 38/431 (8%)
Query: 225 NKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRI 284
N+ G P F +N ++ A + ++AL+V+ + + ++ +F ++K
Sbjct: 98 NRIG-SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 285 DEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
+E ++ G + DVF LV + G + +V + M D +++ ++
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR----DAVSWNSL 212
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
++ G V+E LF EM+ + + + ++ + A V K++ S
Sbjct: 213 LSAYLEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEA----KEVFDSMP 264
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLE-PDFLSVKPLLVLYAEAKRMENFY 463
D+ +N ++ ++ + + ++F + + E PD ++ +L A +
Sbjct: 265 VRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
Query: 464 KLLQQMEKLGFPVIDDLARFFSIFVEKKGPI-MALEVFSYLKEKGYVSVDIYNILMDSLH 522
+ ++K G + LA K G I ALEVF ++ V +N ++ L
Sbjct: 325 WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR---DVSTWNSIISDLS 381
Query: 523 KVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVD-LGEIKQACECHNKIIEM-SCI-- 578
G K AL +F E+ KP+ ++ I +L + +G + QA K+ EM S +
Sbjct: 382 VHGLGKDALEIFSEMVYEGFKPNGITF-IGVLSACNHVGMLDQA----RKLFEMMSSVYR 436
Query: 579 --PSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKS----ND 632
P+I Y C+ L ++G+I+EA LV + + S +E +++ ACK
Sbjct: 437 VEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE-----SLLGACKRFGQLEQ 491
Query: 633 AEKVIGVLNEM 643
AE++ L E+
Sbjct: 492 AERIANRLLEL 502
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 141/346 (40%), Gaps = 26/346 (7%)
Query: 336 PDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL 395
P+ + ++I +N E +F+EM D+ + ++++ A G +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 396 LKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLF-QVTIQEGLEPDFLSVKPLLVLYA 454
+ SG D+ + N L+ FE A K+ ++ ++ D +S LL Y
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVR-----DAVSWNSLLSAYL 217
Query: 455 EAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIY 514
E ++ L +ME+ ++ S + A EVF + + VS +
Sbjct: 218 EKGLVDEARALFDEMEERN---VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVS---W 271
Query: 515 NILMDSLHKVGEMKKALSLFDE-INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKI- 572
N ++ + VG + L +F++ ++ + KPD F+ + LG + Q H I
Sbjct: 272 NAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYID 331
Query: 573 ---IEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACK 629
IE+ + A L K G+ID+A+ + R S + L+V H
Sbjct: 332 KHGIEIEGFLATA----LVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSV-HGLG 386
Query: 630 SNDAEKVIGVLNEMMQQGCPPGNVVCSAVISGMCKYGTIEEARKVF 675
+ E + +EM+ +G P + V+S G +++ARK+F
Sbjct: 387 KDALE----IFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLF 428
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 4/246 (1%)
Query: 226 KFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRID 285
+ GV+ + ++DAL R G +D A + +D + + + L+ +C+ +
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK-HKDS 230
Query: 286 EMLEVLG---RMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYA 342
+V+G +R+ P + YTV++R LV G + V +MK DRVEPD++ Y
Sbjct: 231 SCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 343 TIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS 402
++ G+ + LF E+ G D Y + N + ++ +
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 403 GYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENF 462
G ++ YN LI+ L +A L++ G+ + + ++ Y E +
Sbjct: 351 GSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCA 410
Query: 463 YKLLQQ 468
+ LL++
Sbjct: 411 HGLLEE 416
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%)
Query: 236 YNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR 295
Y +M L+ G +SV + K D ++ + V + ++++G+ + ++ +
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELL 313
Query: 296 EKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
PDV+ Y V + L Q +++G L++ M K EP+V+ Y +I L G +
Sbjct: 314 LLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLS 373
Query: 356 EGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLI 415
L+KEM++ G + + ++ +++ V++V LL++ + +I
Sbjct: 374 RAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVI 433
Query: 416 EGLCNLNKFEKAHKLF 431
LC ++A +L
Sbjct: 434 SRLCEKGLMDQAVELL 449
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 161/415 (38%), Gaps = 74/415 (17%)
Query: 230 KPRVFLYNRIMDALIRTGHLDLALSV-YDDFKEDGLDEERVTFMVLVKGLCQAGRIDEML 288
+P Y ++ L ++ L+ SV Y + D F ++ +GRI+E +
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128
Query: 289 EVLGRMREKLCRPDVFAYTVLVRILV-PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITG 347
EV ++ C P + L+ +LV + +L+ + + + V + + +I
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 348 LSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDL---LKDL----V 400
L G V+ L + M ++D +Y L+ S V +K + FD+ L+DL
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSS-VCKHKDSSCFDVIGYLEDLRKTRF 247
Query: 401 SSGYR-------------------------------ADLGIYNNLIEGLCNLNKFEKAHK 429
S G R DL Y +++G+ + KA K
Sbjct: 248 SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADK 307
Query: 430 LFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVE 489
LF + GL PD + + + +E K++ M KLG
Sbjct: 308 LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG---------------- 351
Query: 490 KKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSY 549
E V+ YNIL+ +L K G++ +A +L+ E+ + +S ++
Sbjct: 352 --------------SEPNVVT---YNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Query: 550 SIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLV 604
I I ++++ E+ A + M+ + + + LC+ G +D+A+ L+
Sbjct: 395 DIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELL 449
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 164/395 (41%), Gaps = 25/395 (6%)
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMK-KDRVEPDVMAYATIITGLSNGGRVEEG 357
C P AY +++ L L+ V ++ ++ + + +I GR+EE
Sbjct: 68 CEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEA 127
Query: 358 YVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSS----GYRADLGIYNN 413
+F ++ + + +L+ V V K +L+ +++ G R + +
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALL--LVLVRK-RQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 414 LIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL--LQQMEK 471
LI+ LC + + + A +L + Q+ + D LL + K F + L+ + K
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK 244
Query: 472 LGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLK-EKGYVSVDIYNILMDSLHKVGEMKK 529
F P + D VE + V + +K ++ + Y I++ + + K
Sbjct: 245 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 530 ALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTK 589
A LFDE+ L PD ++Y++ I +I+ A + + + ++ P++ Y L K
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 590 GLCKIGEIDEAMMLVRDCLG---NVTSGPMEFMYSLTVIHACKSNDAEKVI---GVLNEM 643
L K G++ A L ++ N S + M S + + ++V+ G+L E
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYI-------EVDEVVCAHGLLEEA 417
Query: 644 MQQGCPPGNVVCSAVISGMCKYGTIEEARKVFSNL 678
+ VIS +C+ G +++A ++ ++L
Sbjct: 418 FNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 162/389 (41%), Gaps = 36/389 (9%)
Query: 228 GVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEM 287
G VF+ N ++ + +++ A V+D+ E + V++ ++ G Q+G ++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSE----RDVVSWNSMISGYSQSGSFEDC 217
Query: 288 LEVLGRMREKLC---RPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATI 344
++ M C +P+ + + +L L V ++M ++ ++ D+ +
Sbjct: 218 KKMYKAMLA--CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 345 ITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKVGAGFDLLKDLVSSGY 404
I + G ++ LF EM K D YG+++ ++A V L ++ S G
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEK----DSVTYGAIISGYMAHGLVKEAMALFSEMESIG- 330
Query: 405 RADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYK 464
L +N +I GL N E+ F+ I+ G P+ +++ LL + ++ +
Sbjct: 331 ---LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE 387
Query: 465 LLQQMEKLG--------FPVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNI 516
+ + G +ID+ A+ + + A VF K++ ++ +
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKLGFL-------LGAQRVFDNCKDRSLIA---WTA 437
Query: 517 LMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMS 576
++ + G+ A SLFD++ KPD + + + G+ A + ++
Sbjct: 438 IITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKY 497
Query: 577 CI-PSIAAYKCLTKGLCKIGEIDEAMMLV 604
I P + Y C+ L + G++ +AM +
Sbjct: 498 DIEPGVEHYACMVSVLSRAGKLSDAMEFI 526
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 172/410 (41%), Gaps = 28/410 (6%)
Query: 153 EKQKGY-HHNFASYNA-FAYCMNRNNHHRAADQLPELMDSQG-KPPSEKQFEILIRMHSD 209
E K Y HHN A+ A C R ++ + Q+ M +G S + L+ M++
Sbjct: 50 ENPKRYEHHNVATCIATLQRCAQRKDY-VSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK 108
Query: 210 AGRGLRVYHVYEKMRNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERV 269
G R V+ G + VF YN ++ + G A+ Y + + +G+ ++
Sbjct: 109 CGLMRRAVLVFG------GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKY 162
Query: 270 TFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEM 329
TF L+KG A + ++ +V G + D + + LV +++ +V++E+
Sbjct: 163 TFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDEL 221
Query: 330 KKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFVAVNKV 389
DR D + + ++ G S R E+ ++F +M+ +G + R S++ +F +
Sbjct: 222 -PDR--DDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 390 GAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFLSVKPL 449
G + V +G +D+ + N LI+ E+A+ +F+ E D + +
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD----ERDLFTWNSV 334
Query: 450 LVLYAEAKRMENFYKLLQQMEKLGF-PVIDDLARFFSIFVEKKGPIMALEVFSYLKEKGY 508
L ++ + L ++M G P I L E+ Y+ G
Sbjct: 335 LCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGL 394
Query: 509 VSVD-----IYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYSIAI 553
++ I+N LMD K G+++ A +FD + DS S++I I
Sbjct: 395 LNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMR----VKDSASWNIMI 440
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/386 (18%), Positives = 154/386 (39%), Gaps = 25/386 (6%)
Query: 302 DVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLF 361
DVF Y L+ V G+ + + EM+ + + PD + +++ G S+ + + +
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVH 183
Query: 362 KEMKSKGHLIDRAIYGSLVES---FVAVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGL 418
G D + LV S F++V FD L D R D ++N L+ G
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD------RDDSVLWNALVNGY 237
Query: 419 CNLNKFEKAHKLFQVTIQEGLEPDFLSVKPLLVLYAEAKRMENFYKL--LQQMEKLGFPV 476
+ +FE A +F +EG+ ++ +L + + ++N + L G +
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 477 IDDLARFFSIFVEKKGPIMALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDE 536
+ A ++ + K A +F + E+ + +N ++ G+ L+LF+
Sbjct: 298 VVSNA-LIDMYGKSKWLEEANSIFEAMDERDLFT---WNSVLCVHDYCGDHDGTLALFER 353
Query: 537 INGANLKPDSFSYSIAILCHVDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGL----C 592
+ + ++PD + + + L ++Q E H +I + ++ + + L
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 593 KIGEIDEAMMLVRDCLGNVTSGPMEFMYSLTVIHACKSNDAEKVIGVLNEMMQQGCPPGN 652
K G++ +A M V D + S M + + +C E + + + M + G P
Sbjct: 414 KCGDLRDARM-VFDSMRVKDSASWNIMINGYGVQSC----GELALDMFSCMCRAGVKPDE 468
Query: 653 VVCSAVISGMCKYGTIEEARKVFSNL 678
+ ++ G + E R + +
Sbjct: 469 ITFVGLLQACSHSGFLNEGRNFLAQM 494
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 195/476 (40%), Gaps = 47/476 (9%)
Query: 164 SYNAFAYCMNRNNHHRAADQLPELMDSQGKPPSEKQFEILIRMHSDAGRGLRVYHVYEKM 223
SY +NN A +L M + G +E +I S G G+ + + +
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG-GIWDCRMLQSL 198
Query: 224 RNKFGVKPRVFLYNRIMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGR 283
K ++ RVF+ ++ L A ++D+ E L VT+ V++ G +AG
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL----VTWNVMLNGYSKAGL 254
Query: 284 IDEMLEVLGRMREKLCRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEP------D 337
I++ E+ ++ EK D+ ++ ++ + + LD L + EM + ++P D
Sbjct: 255 IEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVD 310
Query: 338 VMAYATIITGLSNGGR-----VEEGY----------VLFKEMKSKGHLIDRAIYGSLVES 382
+++ + G S G + V+ G+ + F + + L + S+ +
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 383 FVAVNKVGAGF------DLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQ 436
+ N + AGF + +++ + D+ +N +I G + A LF+ I
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 437 EG-LEPDFLSVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPI- 494
++PD +++ + + +E + + P D+L K G I
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIE 490
Query: 495 MALEVFSYLKEKGYVSVDIYNILMDSLHKVGEMKKALSLFDEINGANLKPDSFSYS--IA 552
AL +F K ++ +N ++ G K AL L+ ++ +KP+S ++ ++
Sbjct: 491 TALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Query: 553 ILCH---VDLGEIKQACECHNKIIEMSCIPSIAAYKCLTKGLCKIGEIDEAMMLVR 605
CH V+LG+ + IE P I Y C+ L K G ++EA +++
Sbjct: 551 ACCHAGLVELGKTYFESMKSDHGIE----PDIKHYGCMVDLLGKAGRLEEAKEMIK 602
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 194 PPSEKQFEILIRMHSDAGRGLRVYHVYEKMRN--KFGVKPRVFLYNRIMDALIRTGHLDL 251
PP++ +I M++ G +++ + +N + P +N I+ GH L
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKL 525
Query: 252 ALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMR-EKLCRPDVFAYTVLV 310
AL +Y D + + +TF+ ++ C AG ++ M+ + PD+ Y +V
Sbjct: 526 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 585
Query: 311 RILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVE 355
+L G L+ E +KK V+ DVM + +++ G VE
Sbjct: 586 DLLGKAGRLE---EAKEMIKKMPVKADVMIWGMLLSASRTHGNVE 627
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 255 VYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKLCRPDVFAYTVLVRILV 314
++ KE GL V ++ GLC+ G + E +++ G MR+K P+V YT +V
Sbjct: 121 IFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 315 PQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRA 374
++ R++ +M+ + + P+ +Y ++ GL N +++ EM GH +
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 375 IYGSLVESFVAVNKVGAGFDLLKDLVSSGYRADL 408
+ LV++ V V + L G+ ++
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNV 271
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 325 VWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGYVLFKEMKSKGHLIDRAIYGSLVESFV 384
++++MK+ + P+ +A ++ GL G V+E LF M+ KG + + IY ++VE+F
Sbjct: 121 IFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 385 AVNKVGAGFDLLKDLVSSGYRADLGIYNNLIEGLCNLNKFEKAHKLFQVTIQEGLEPDFL 444
+K+ + + + ++G + Y L++GL N N + A ++ G P+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVP 237
Query: 445 SVKPLLVLYAEAKRMENFYKLLQQMEKLGFPVIDDLARFFSIFVEKKGPIMALEVFSYLK 504
+ L+ K +E + + + GF V + F++K+ P +L + K
Sbjct: 238 TFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN---VKAVKEFMDKRAPFPSLAWEAIFK 294
Query: 505 EK 506
+K
Sbjct: 295 KK 296
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%)
Query: 239 IMDALIRTGHLDLALSVYDDFKEDGLDEERVTFMVLVKGLCQAGRIDEMLEVLGRMREKL 298
++D L + G + A+ ++ ++ G E V + +V+ C+A +I++ + +M+
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 299 CRPDVFAYTVLVRILVPQGNLDGCLRVWEEMKKDRVEPDVMAYATIITGLSNGGRVEEGY 358
P+ F+Y VLV+ L LD + EM + P+V + ++ L VE+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 359 VLFKEMKSKGHLID 372
+ KG ++
Sbjct: 257 SAIDTLNQKGFAVN 270