Miyakogusa Predicted Gene

Lj3g3v0819890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0819890.1 Non Chatacterized Hit- tr|A5ATG0|A5ATG0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,31.53,1e-18,
,gene.g46138.t1.1
         (315 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51940.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    96   2e-20
AT5G03990.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    80   2e-15

>AT3G51940.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G03990.1); Has 215 Blast hits to 164 proteins
           in 38 species: Archae - 0; Bacteria - 35; Metazoa - 16;
           Fungi - 18; Plants - 121; Viruses - 0; Other Eukaryotes
           - 25 (source: NCBI BLink). | chr3:19273708-19275157
           REVERSE LENGTH=453
          Length = 453

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 140/321 (43%), Gaps = 60/321 (18%)

Query: 4   HSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQIKEL 63
           + NV  W+DSA E+ F N KKR+W+++N L CD+S+PDP+ +I ++DW+ ++DPE I++L
Sbjct: 63  NGNVITWDDSACEDTFHNEKKRFWSQVNGLHCDVSIPDPDLYISEVDWDTFVDPELIRDL 122

Query: 64  DKAFFVLPDEEQGDATKNKRTKTSVDDEDAWKPTGTPLSRVLENKEWNQEDYHD----DS 119
           +KA+F  PD+       N   K    D++       P +R+LE    N +D  +     S
Sbjct: 123 EKAYFAPPDD------VNIGFKRGRGDKNWSGCDTVPEARMLETPWKNSDDIIETGKKSS 176

Query: 120 GNMDNTDNPWE---CSVTRQNGGLTGNDNPWECSVTPQNGGLTDNSWKGDHAQSWGWNEG 176
           G      + WE   C V  +      ND       T   G LT   W+         N+ 
Sbjct: 177 GWNLTEGSSWEAKPCCVNEK-----AND-------TASGGCLTTEEWRE--------NQW 216

Query: 177 RDHDNQCRDWNSGFSQKDKGWGKVGCSSWSQQQSNDWASFSNSWGCKSSQQNVTPVNTGW 236
              D     W      KD GW K G  +   + S ++    N W  + S    T  +T W
Sbjct: 217 IAKDRVNDSWEYSGQGKDDGWDKSGHQNKKVKGSEEYKKIDNPWEAQPSCIKETAKDTTW 276

Query: 237 GNRGANVSGWKQQ------------ENTDLS-RGLQFK-----------RNNGGCSAWNQ 272
           G  G +  GW+ +            +N DL  +G++ K           R   GC+ W  
Sbjct: 277 G--GCSGEGWEDRGWNNDSWGSGGWDNRDLGNQGMEMKEWRGKGYSRDFREPKGCNPWKG 334

Query: 273 SYQRREGSFRHNSGYNSSQFQ 293
            +     +FR  SG N+  +Q
Sbjct: 335 GFVPDNVAFRE-SGVNAGGWQ 354


>AT5G03990.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G51940.1); Has 30201 Blast hits to 17322
           proteins in 780 species: Archae - 12; Bacteria - 1396;
           Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
           0; Other Eukaryotes - 2996 (source: NCBI BLink). |
           chr5:1075957-1077358 FORWARD LENGTH=302
          Length = 302

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 53/75 (70%)

Query: 1   MYCHSNVHNWNDSAAEEAFQNAKKRYWARINNLPCDISLPDPESFIEQIDWNPYIDPEQI 60
           M+ +  V  W+DSA E+AF+NAK R+WA IN L CD+SLPDP+ +I+ +DW+  +D E I
Sbjct: 67  MHIYDRVVQWDDSAGEDAFKNAKSRFWAEINGLTCDLSLPDPDVYIDDVDWDAEVDNELI 126

Query: 61  KELDKAFFVLPDEEQ 75
            +L++    L +E++
Sbjct: 127 LDLERGPDPLTEEQE 141