Miyakogusa Predicted Gene

Lj3g3v0807810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807810.1 CUFF.41471.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F | chr5:1328004-13...   330   5e-91
AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F | chr5:1327292-13...   330   7e-91
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferas...    67   8e-12
AT5G23670.2 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...    66   2e-11
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-79...    66   2e-11
AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    64   7e-11
AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    51   6e-07
AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain...    51   6e-07

>AT5G04620.1 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1328004-1329934 FORWARD LENGTH=343
          Length = 343

 Score =  330 bits (846), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 181/220 (82%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
           M+RKVVVTDSLFSMDGD+APM EL++LRKK+ FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 115 MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE 174

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+C+GTLSKAAGCHGGFIACSK WK LIQSRGRSFIFS                  +
Sbjct: 175 ADVDLCVGTLSKAAGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR 234

Query: 121 LETWRRKAIWNRVKDFHSLTGIPVTSPIISLIVGSEDKALQASRFLLQSGFHVTAIRPPT 180
            E WRRKAIW RVK+F  L+G+ ++SPIISL+VG+++KAL+ASR+LL+SGFHV AIRPPT
Sbjct: 235 KEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPT 294

Query: 181 VPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIY 220
           VPPNSCRLRVTLSA HT +D++ L  ALS C++F +T  +
Sbjct: 295 VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTATH 334


>AT5G04620.2 | Symbols: ATBIOF, BIOF | biotin F |
           chr5:1327292-1329934 FORWARD LENGTH=476
          Length = 476

 Score =  330 bits (845), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 153/220 (69%), Positives = 181/220 (82%)

Query: 1   MRRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE 60
           M+RKVVVTDSLFSMDGD+APM EL++LRKK+ FLLVIDDAHGTFVCG+NGGGVAEEFNCE
Sbjct: 248 MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE 307

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXXXK 120
            DVD+C+GTLSKAAGCHGGFIACSK WK LIQSRGRSFIFS                  +
Sbjct: 308 ADVDLCVGTLSKAAGCHGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVAR 367

Query: 121 LETWRRKAIWNRVKDFHSLTGIPVTSPIISLIVGSEDKALQASRFLLQSGFHVTAIRPPT 180
            E WRRKAIW RVK+F  L+G+ ++SPIISL+VG+++KAL+ASR+LL+SGFHV AIRPPT
Sbjct: 368 KEIWRRKAIWERVKEFKELSGVDISSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPT 427

Query: 181 VPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIY 220
           VPPNSCRLRVTLSA HT +D++ L  ALS C++F +T  +
Sbjct: 428 VPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTATH 467


>AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase 1
           | chr3:18089346-18092276 FORWARD LENGTH=489
          Length = 489

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 18/216 (8%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  + KK+   + +D+AH     G+ G GV E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEIVSICKKYKAYVYLDEAHSIGAIGKTGRGVCELLGVDT 299

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
            DVD+ +GT +K+ G  GG+IA SK     ++ +  + +++                   
Sbjct: 300 SDVDIMMGTFTKSFGSCGGYIAGSKDLIQYLKHQCPAHLYATSISTPSATQIISAIKVIL 359

Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
                     KL   R  + + R +      G  V     SP++ +++ +  K    SR 
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAE--LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417

Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDL 201
            L+    V  +  P  P    R R+ +SA H+R+DL
Sbjct: 418 CLRENLAVVVVGFPATPLLLARARICISASHSREDL 453


>AT5G23670.2 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 18/216 (8%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCEK 61
           ++ +VV + ++SM+G+   + E+  + KK+   + +D+AH     G+ G G+ E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDT 299

Query: 62  -DVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
            DVDV +GT +K+ G  GG+IA SK     ++ +  + +++                   
Sbjct: 300 ADVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVIL 359

Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
                     KL   R  + + R +      G  V     SP++ +++ +  K    SR 
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAE--LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417

Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDL 201
            L+    V  +  P  P    R R+ +SA H+R+DL
Sbjct: 418 CLRQKVAVVVVGFPATPLLLARARICISASHSREDL 453


>AT5G23670.1 | Symbols: LCB2 | long chain base2 |
           chr5:7981889-7985037 FORWARD LENGTH=489
          Length = 489

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 18/216 (8%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCEK 61
           ++ +VV + ++SM+G+   + E+  + KK+   + +D+AH     G+ G G+ E    + 
Sbjct: 240 KKIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGKTGKGICELLGVDT 299

Query: 62  -DVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXX--- 117
            DVDV +GT +K+ G  GG+IA SK     ++ +  + +++                   
Sbjct: 300 ADVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVIL 359

Query: 118 --------XXKLETWRRKAIWNRVKDFHSLTGIPV----TSPIISLIVGSEDKALQASRF 165
                     KL   R  + + R +      G  V     SP++ +++ +  K    SR 
Sbjct: 360 GEDGSNRGAQKLARIRENSNFFRAE--LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRE 417

Query: 166 LLQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDL 201
            L+    V  +  P  P    R R+ +SA H+R+DL
Sbjct: 418 CLRQKVAVVVVGFPATPLLLARARICISASHSREDL 453


>AT3G48790.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr3:18093404-18095181 FORWARD LENGTH=350
          Length = 350

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 16/236 (6%)

Query: 2   RRKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE- 60
           ++ +VV + ++SM+G+   + E+  +  ++   + +D+AH     G+ G GV E    + 
Sbjct: 97  KKIIVVVEGIYSMEGEICDLPEIVSVCSEYKAYVYLDEAHSIGAIGKTGRGVCELLGVDT 156

Query: 61  KDVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRSFIFSXXXXXXXXXXXXXXXXX-- 118
            +VD+ +GT +K+ G  GG+IA SK     ++    + +++                   
Sbjct: 157 TEVDIMMGTFTKSLGSCGGYIAGSKDLVQYLKQHYPAHLYATSISTPAAQQVISAIKVIF 216

Query: 119 ---------XKLETWRRKAIWNRV---KDFHSLTGIPVTSPIISLIVGSEDKALQASRFL 166
                     KL   R  + + R    K    + G+   SPI+ +++ +  K    SR  
Sbjct: 217 GVDGSNRGELKLARIRENSNFFRAELQKMGFKVLGV-YDSPIMPIMLYNPAKIAAFSREC 275

Query: 167 LQSGFHVTAIRPPTVPPNSCRLRVTLSAVHTRQDLENLSAALSRCINFQDTRIYSS 222
           L+    +  +  P +P    R R+  SA H R+DL      +SR  +    + +++
Sbjct: 276 LRENLAIVVVSFPPIPLLLARARICNSASHLREDLIKALQVISRAGDLTGIKYFTA 331


>AT4G36480.2 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE-K 61
           R+ +V ++++   G  AP+ E+ +L++K+ F +++D+++   V G++G G+AE  +   +
Sbjct: 246 RRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIE 305

Query: 62  DVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRS--FIFS 101
            +DV    +  A    GGF  C+ + +++   R  S  ++FS
Sbjct: 306 KIDVVTAAMGHALATEGGF--CTGNARIIDYQRLSSSGYVFS 345


>AT4G36480.1 | Symbols: ATLCB1, LCB1, EMB2779, FBR11 | long-chain
           base1 | chr4:17218598-17221124 FORWARD LENGTH=482
          Length = 482

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 3   RKVVVTDSLFSMDGDYAPMVELAELRKKHDFLLVIDDAHGTFVCGQNGGGVAEEFNCE-K 61
           R+ +V ++++   G  AP+ E+ +L++K+ F +++D+++   V G++G G+AE  +   +
Sbjct: 246 RRYIVAEAVYQNSGQIAPLDEIVKLKEKYRFRVILDESNSFGVLGRSGRGLAEHHSVPIE 305

Query: 62  DVDVCIGTLSKAAGCHGGFIACSKSWKLLIQSRGRS--FIFS 101
            +DV    +  A    GGF  C+ + +++   R  S  ++FS
Sbjct: 306 KIDVVTAAMGHALATEGGF--CTGNARIIDYQRLSSSGYVFS 345