Miyakogusa Predicted Gene
- Lj3g3v0807670.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0807670.2 tr|G7IVC2|G7IVC2_MEDTR E3 ubiquitin-protein
ligase synoviolin OS=Medicago truncatula
GN=MTR_3g007760,85.67,0,zf-RING_2,Zinc finger, RING-type;
CUE,Ubiquitin system component Cue; SYNOVIOLIN-RELATED,NULL; no
de,CUFF.41441.2
(590 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:... 798 0.0
AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:... 798 0.0
AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:... 747 0.0
AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 | chr5:... 738 0.0
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 121 1e-27
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 116 4e-26
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 115 8e-26
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 95 1e-19
AT5G01960.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 4e-07
AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |... 52 2e-06
AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |... 52 2e-06
>AT4G25230.2 | Symbols: RIN2 | RPM1 interacting protein 2 |
chr4:12924446-12928671 FORWARD LENGTH=578
Length = 578
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/590 (65%), Positives = 466/590 (78%), Gaps = 12/590 (2%)
Query: 1 MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLG 60
M ++ + VS ST LSFVGLQ T+LSLD+LR+DGLI N++ D+ E +E+ LG
Sbjct: 1 MGIKYLPVSVASTALSFVGLQVWTELSLDRLRADGLIAKNISLGDS-----EHALELLLG 55
Query: 61 LYTTIGLLANCLINIFVLLNLCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPP 120
Y TI LL N ++N+++LL L LK +FF +LY ET+KL+ERL NY+IYKGTFLPL++PP
Sbjct: 56 SYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPP 115
Query: 121 TIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSALLFIFLVDVLW 180
TI+Q LW+ WL VLC+ KMFQALARDRL+RLNASPS+TPWTY RVYS L + VD+ W
Sbjct: 116 TIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMFW 175
Query: 181 IRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK 240
I+L L TY T S+++LLL FEP SIAFETLQA+LIHGFQLLD+W++H A +SDC+ K
Sbjct: 176 IKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 241 LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIR 300
+D++T GSLLEWKG+L RNLGFFLDMAT +MALGHYL+IW LHG+AFHLVDAVLFLNIR
Sbjct: 236 FIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIR 295
Query: 301 ALLSAIINRVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHL 360
ALLSAI+ R+KG+IKLRIALG LHAALPDAT+EELR YDDECAICRE MAKAK+L+CNHL
Sbjct: 296 ALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHL 355
Query: 361 FHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSAGFDRP 420
FHL CLRSWLDQGL E+Y+CPTCRKPLF GR ENE N +SSDEQLARQ+ +R
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQL----ERQ 411
Query: 421 NPARHTVPAGFYQNQTLNNAEGVPLRGPGLDSGWLHSWPNQGIDGAGPSTAIRTVGLGRV 480
N H + G + + ++ E R GLD WL +W +QG D AGPST RTVGLGRV
Sbjct: 412 NNPVHALATGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRV 471
Query: 481 QMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIPSTGGRLPGGTGSLHIRTP 540
QMMMRHLASVGE+YAQTA +D AW+LWP+NPSQAS S +T+P G G TG LH+RT
Sbjct: 472 QMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNG---GRTGGLHLRTV 528
Query: 541 SRSASDNTANLLAMADTVREVLPHIPDDIIFQDLQQTNSVTVTVNNLLQM 590
S + +++ N+LAMA+TVREV+PH+PD+IIFQDLQ+TNSV VTVNNLLQM
Sbjct: 529 SNTTNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM 578
>AT4G25230.1 | Symbols: RIN2 | RPM1 interacting protein 2 |
chr4:12924446-12928671 FORWARD LENGTH=578
Length = 578
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/590 (65%), Positives = 466/590 (78%), Gaps = 12/590 (2%)
Query: 1 MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLG 60
M ++ + VS ST LSFVGLQ T+LSLD+LR+DGLI N++ D+ E +E+ LG
Sbjct: 1 MGIKYLPVSVASTALSFVGLQVWTELSLDRLRADGLIAKNISLGDS-----EHALELLLG 55
Query: 61 LYTTIGLLANCLINIFVLLNLCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPP 120
Y TI LL N ++N+++LL L LK +FF +LY ET+KL+ERL NY+IYKGTFLPL++PP
Sbjct: 56 SYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPP 115
Query: 121 TIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSALLFIFLVDVLW 180
TI+Q LW+ WL VLC+ KMFQALARDRL+RLNASPS+TPWTY RVYS L + VD+ W
Sbjct: 116 TIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMFW 175
Query: 181 IRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK 240
I+L L TY T S+++LLL FEP SIAFETLQA+LIHGFQLLD+W++H A +SDC+ K
Sbjct: 176 IKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 241 LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIR 300
+D++T GSLLEWKG+L RNLGFFLDMAT +MALGHYL+IW LHG+AFHLVDAVLFLNIR
Sbjct: 236 FIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIR 295
Query: 301 ALLSAIINRVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHL 360
ALLSAI+ R+KG+IKLRIALG LHAALPDAT+EELR YDDECAICRE MAKAK+L+CNHL
Sbjct: 296 ALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHL 355
Query: 361 FHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSAGFDRP 420
FHL CLRSWLDQGL E+Y+CPTCRKPLF GR ENE N +SSDEQLARQ+ +R
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTENEVNPRTVEVSSDEQLARQL----ERQ 411
Query: 421 NPARHTVPAGFYQNQTLNNAEGVPLRGPGLDSGWLHSWPNQGIDGAGPSTAIRTVGLGRV 480
N H + G + + ++ E R GLD WL +W +QG D AGPST RTVGLGRV
Sbjct: 412 NNPVHALATGLFPAEVPDSVENDTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRV 471
Query: 481 QMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIPSTGGRLPGGTGSLHIRTP 540
QMMMRHLASVGE+YAQTA +D AW+LWP+NPSQAS S +T+P G G TG LH+RT
Sbjct: 472 QMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNG---GRTGGLHLRTV 528
Query: 541 SRSASDNTANLLAMADTVREVLPHIPDDIIFQDLQQTNSVTVTVNNLLQM 590
S + +++ N+LAMA+TVREV+PH+PD+IIFQDLQ+TNSV VTVNNLLQM
Sbjct: 529 SNTTNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM 578
>AT5G51450.1 | Symbols: RIN3 | RPM1 interacting protein 3 |
chr5:20893164-20897223 FORWARD LENGTH=577
Length = 577
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/590 (63%), Positives = 458/590 (77%), Gaps = 13/590 (2%)
Query: 1 MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLG 60
M + + +S +T LSFVGLQ T+LSLD+LR+DG+I N++ N+ + +EL L
Sbjct: 1 MGITYLHISVATTALSFVGLQVWTELSLDRLRADGIITKNIS-LGNSENTLEL----LLS 55
Query: 61 LYTTIGLLANCLINIFVLLNLCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPP 120
+TTI LLA+ ++NI++LL L LK +FF +LY ETRKL+ERL NY+IYKGTFLP +VP
Sbjct: 56 SHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPR 115
Query: 121 TIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSALLFIFLVDVLW 180
T++Q LW+ WL VLC+ KMFQALARDRLDRLNASPS+TPWTY RVYSAL + D+ W
Sbjct: 116 TVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCW 175
Query: 181 IRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK 240
I+L L Y T SS++LLL FEP IAFETLQA+LIHGFQLLD+W++H A +SDC+ K
Sbjct: 176 IKLSLMIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 241 LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIR 300
D++T GSLLEWKG+L RNLGFFLDMAT +MALGHYL+IW LHGMAFHLVDAVLFLNIR
Sbjct: 236 FYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIR 295
Query: 301 ALLSAIINRVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHL 360
ALLS+I+ R+KG+IKLR+ALG LHAAL DAT+EELR YDDECAICRE MAKAK+L+CNHL
Sbjct: 296 ALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHL 355
Query: 361 FHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSAGFDRP 420
FHL CLRSWLDQGL E+Y+CPTCRKPLF GR E+E N S G +SSDE LARQ F+R
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQ 411
Query: 421 NPARHTVPAGFYQNQTLNNAEGVPLRGPGLDSGWLHSWPNQGIDGAGPSTAIRTVGLGRV 480
N + H + G + +T N E P R +D WL +W +QG+D G S R+VGLG+V
Sbjct: 412 NNSVHALTTGMFPTETPNFTESDPWRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQV 471
Query: 481 QMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIPSTGGRLPGGTGSLHIRTP 540
Q+MMRHLASVGE AQT +D +W LWP+NPSQAS S + +P G G TG LH+RT
Sbjct: 472 QLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAG---GRTGGLHLRTV 528
Query: 541 SRSASDNTANLLAMADTVREVLPHIPDDIIFQDLQQTNSVTVTVNNLLQM 590
SR A++N A++LAMA+TVREVLPH+PD+IIFQDLQ+TNSV+VTVNNLLQM
Sbjct: 529 SR-AANNMASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQM 577
>AT5G51450.2 | Symbols: RIN3 | RPM1 interacting protein 3 |
chr5:20893164-20897223 FORWARD LENGTH=595
Length = 595
Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/608 (61%), Positives = 459/608 (75%), Gaps = 31/608 (5%)
Query: 1 MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLG 60
M + + +S +T LSFVGLQ T+LSLD+LR+DG+I N++ N+ + +EL L
Sbjct: 1 MGITYLHISVATTALSFVGLQVWTELSLDRLRADGIITKNIS-LGNSENTLEL----LLS 55
Query: 61 LYTTIGLLANCLINIFVLLNLCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPP 120
+TTI LLA+ ++NI++LL L LK +FF +LY ETRKL+ERL NY+IYKGTFLP +VP
Sbjct: 56 SHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPR 115
Query: 121 TIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSALLFIFLVDVLW 180
T++Q LW+ WL VLC+ KMFQALARDRLDRLNASPS+TPWTY RVYSAL + D+ W
Sbjct: 116 TVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCW 175
Query: 181 IRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK 240
I+L L Y T SS++LLL FEP IAFETLQA+LIHGFQLLD+W++H A +SDC+ K
Sbjct: 176 IKLSLMIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 241 LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIR 300
D++T GSLLEWKG+L RNLGFFLDMAT +MALGHYL+IW LHGMAFHLVDAVLFLNIR
Sbjct: 236 FYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIR 295
Query: 301 ALLSAIINRVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHL 360
ALLS+I+ R+KG+IKLR+ALG LHAAL DAT+EELR YDDECAICRE MAKAK+L+CNHL
Sbjct: 296 ALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHL 355
Query: 361 FHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSAGFDRP 420
FHL CLRSWLDQGL E+Y+CPTCRKPLF GR E+E N S G +SSDE LARQ F+R
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQ----FERQ 411
Query: 421 NPARHTVPAGFYQNQTLNNAEG------------------VPLRGPGLDSGWLHSWPNQG 462
N + H + G + +T N E +P R +D WL +W +QG
Sbjct: 412 NNSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQG 471
Query: 463 IDGAGPSTAIRTVGLGRVQMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIP 522
+D G S R+VGLG+VQ+MMRHLASVGE AQT +D +W LWP+NPSQAS S + +P
Sbjct: 472 VDVVGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVP 531
Query: 523 STGGRLPGGTGSLHIRTPSRSASDNTANLLAMADTVREVLPHIPDDIIFQDLQQTNSVTV 582
G G TG LH+RT SR A++N A++LAMA+TVREVLPH+PD+IIFQDLQ+TNSV+V
Sbjct: 532 PGAG---GRTGGLHLRTVSR-AANNMASILAMAETVREVLPHVPDEIIFQDLQRTNSVSV 587
Query: 583 TVNNLLQM 590
TVNNLLQM
Sbjct: 588 TVNNLLQM 595
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 179/412 (43%), Gaps = 89/412 (21%)
Query: 61 LYTTIGLLANCLINIFVLLNLCL----------KAVFFTELYPSET--------RKLIER 102
Y L+ IN+ VLLN+ L K VF L +E R+L+E
Sbjct: 29 FYPATVYLSTSKINLVVLLNMGLVLMLSLWNLVKIVFLGSLREAEVERLNEQAWRELMEI 88
Query: 103 LINYVIYKGTFLPLIVPPTIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWT 162
L I++ F G S ++ L K +A+ R++ + +PS T +
Sbjct: 89 LFAITIFRQDF----------SVGFIS-LVVTLLLIKGLHWMAQKRVEYIETTPSVTLLS 137
Query: 163 YLRVYSALLFIFLVDVLWIRLCLATYTT-------HASSMFLLLFFEPLSIAFETLQAIL 215
++R+ S ++F+ ++D CL TY++ +SM + FE + +A T+ I+
Sbjct: 138 HVRIVSFMVFLLILD------CLLTYSSIQQLIQSRKASMSVFFTFEYMILATTTVSIIV 191
Query: 216 IHGFQLLDIWLHHSACHSSDCRMPKLLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALG 275
+ F + D+ L G +W+G + F+L++ L+ L
Sbjct: 192 KYAFYVTDM--------------------LKEG---QWEGKPVYT--FYLELVRDLLHLS 226
Query: 276 HYL----YIWRLHGMAFHLVDAVLFLNIRALLSAIIN---RVKGFIKLRIALGTLHAALP 328
YL I+ +G+ HL IR L N RV +++ R ++ P
Sbjct: 227 MYLCFFLMIFMNYGLPLHL--------IRELYETFRNFKIRVTDYLRYRKITSNMNDRFP 278
Query: 329 DATTEELRTYDDECAICRESMAKAKKLNCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLF 388
DAT EEL + D C ICRE M AKKL C HLFH+ CLRSWL++ TCPTCR +
Sbjct: 279 DATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQ----NTCPTCRALVV 334
Query: 389 AGRPENETNSSAGVISSDEQLARQMSAGFDRPNPARHTVPAGFYQNQTLNNA 440
EN T++++G Q + Q G + +V A +N + + A
Sbjct: 335 PA--ENATSTASGN-RGPHQESLQQGTGTSSSDGQGSSVSAAASENMSRHEA 383
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 76/367 (20%)
Query: 61 LYTTIGLLANCLINIFVLLNLCL----------KAVFFTELYPSET--------RKLIER 102
Y L+ I++ +LLN+CL K VF L +E R+L+E
Sbjct: 29 FYPATVYLSTSKISLVLLLNMCLVLMLSLWHLVKFVFLGSLREAEVERLNEQAWRELMEI 88
Query: 103 LINYVIYK----GTFLPLIVPPTIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSA 158
L I++ FLPL+V + +A W LA+ R++ + +PS
Sbjct: 89 LFAITIFRQDFSSGFLPLVVTLLLIKALHW---------------LAQKRVEYIETTPSV 133
Query: 159 TPWTYLRVYSALLFIFLVDVLWIRLCLAT-YTTHASSMFLLLFFEPLSIAFETLQAILIH 217
+ ++ R+ S + F+ LVD L++ + + +S+ L FE + +A T+ + +
Sbjct: 134 SKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYMILATTTVAIFVKY 193
Query: 218 GFQLLDIWLHHSACHSSDCRMPKLLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHY 277
F + D+ L+D E K + L D+ M + +
Sbjct: 194 VFYVTDM----------------LMD-----GQWEKKPVYTFYLELIRDLLHLSMYICFF 232
Query: 278 LYIWRLHGMAFHLVDAVLFLNIRALLSAIIN---RVKGFIKLRIALGTLHAALPDATTEE 334
I+ +G+ HL +R L N RV +++ R ++ PDAT EE
Sbjct: 233 FVIFMNYGVPLHL--------LRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEE 284
Query: 335 LRTYDDECAICRESMAKAKKLNCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPEN 394
L D C ICRE M AKKL C HLFH+ CLRSWL++ TCPTCR + PEN
Sbjct: 285 LTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQ----QTCPTCRALVVP--PEN 338
Query: 395 ETNSSAG 401
T+++ G
Sbjct: 339 ATSAAPG 345
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 72/345 (20%)
Query: 110 KGTFLPLIVPPTIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATPWTYLRVYSA 169
+G F P V + + L W+ A+ R++ + +PS T +++R+ S
Sbjct: 26 RGQFYPATVYLSTSKINLGLHWM------------AQKRVEYIETTPSVTLLSHVRIVSF 73
Query: 170 LLFIFLVDVLWIRLCLATYTT-------HASSMFLLLFFEPLSIAFETLQAILIHGFQLL 222
++F+ ++D CL TY++ +SM + FE + +A T+ I+ + F +
Sbjct: 74 MVFLLILD------CLLTYSSIQQLIQSRKASMSVFFTFEYMILATTTVSIIVKYAFYVT 127
Query: 223 DIWLHHSACHSSDCRMPKLLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYL---- 278
D+ L G +W+G + F+L++ L+ L YL
Sbjct: 128 DM--------------------LKEG---QWEGKPVYT--FYLELVRDLLHLSMYLCFFL 162
Query: 279 YIWRLHGMAFHLVDAVLFLNIRALLSAIIN---RVKGFIKLRIALGTLHAALPDATTEEL 335
I+ +G+ HL IR L N RV +++ R ++ PDAT EEL
Sbjct: 163 MIFMNYGLPLHL--------IRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEEL 214
Query: 336 RTYDDECAICRESMAKAKKLNCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENE 395
+ D C ICRE M AKKL C HLFH+ CLRSWL++ TCPTCR + EN
Sbjct: 215 SSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQ----NTCPTCRALVVPA--ENA 268
Query: 396 TNSSAGVISSDEQLARQMSAGFDRPNPARHTVPAGFYQNQTLNNA 440
T++++G Q + Q G + +V A +N + + A
Sbjct: 269 TSTASGN-RGPHQESLQQGTGTSSSDGQGSSVSAAASENMSRHEA 312
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 243 DTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYL----YIWRLHGMAFHLVDAVLFLN 298
D L G +W+G + F+L++ L+ L YL I+ +G+ HL
Sbjct: 20 DMLKEG---QWEGKPV--YTFYLELVRDLLHLSMYLCFFLMIFMNYGLPLHL-------- 66
Query: 299 IRALLSAIIN---RVKGFIKLRIALGTLHAALPDATTEELRTYDDECAICRESMAKAKKL 355
IR L N RV +++ R ++ PDAT EEL + D C ICRE M AKKL
Sbjct: 67 IRELYETFRNFKIRVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKL 126
Query: 356 NCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSAGVISSDEQLARQMSA 415
C HLFH+ CLRSWL++ TCPTCR + EN T++++G Q + Q
Sbjct: 127 VCGHLFHVHCLRSWLERQ----NTCPTCRALVVPA--ENATSTASGN-RGPHQESLQQGT 179
Query: 416 GFDRPNPARHTVPAGFYQNQTLNNA 440
G + +V A +N + + A
Sbjct: 180 GTSSSDGQGSSVSAAASENMSRHEA 204
>AT5G01960.1 | Symbols: | RING/U-box superfamily protein |
chr5:370811-372775 FORWARD LENGTH=426
Length = 426
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 254 KGILIRNLGFFLDMATFLMALGHYLY---IW------RLHGMAFHLVDAVLFLNIRALLS 304
+G R G L + + M L L +W + +G F + L+L + L+
Sbjct: 269 RGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTGLYLTFK--LT 326
Query: 305 AIINRVKGFIKLRIALGTLHAALPD-ATTEELRTYDDECAICRESMAKAKKLNCNHLFHL 363
+++ +V+ F AL ATTE++ D CAIC+E M L C H+F
Sbjct: 327 SVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILLRCKHMFCE 386
Query: 364 SCLRSWLDQGLTEIYTCPTCR 384
C+ W ++ TCP CR
Sbjct: 387 DCVSEWFERE----RTCPLCR 403
>AT2G04240.2 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 339 DDECAICRESM---AKAKKLNCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENE 395
D+EC++C ++ KL C HLFH +CL W+D TCP CR PL PE+
Sbjct: 100 DNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNI---TCPLCRTPLVV-VPEDH 155
Query: 396 TNSS 399
SS
Sbjct: 156 QLSS 159
>AT2G04240.1 | Symbols: XERICO | RING/U-box superfamily protein |
chr2:1461816-1462304 REVERSE LENGTH=162
Length = 162
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 339 DDECAICRESM---AKAKKLNCNHLFHLSCLRSWLDQGLTEIYTCPTCRKPLFAGRPENE 395
D+EC++C ++ KL C HLFH +CL W+D TCP CR PL PE+
Sbjct: 100 DNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYWNI---TCPLCRTPLVV-VPEDH 155
Query: 396 TNSS 399
SS
Sbjct: 156 QLSS 159