Miyakogusa Predicted Gene

Lj3g3v0807650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807650.1 Non Chatacterized Hit- tr|I1KFP8|I1KFP8_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,90.96,0,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; RRNA_A_DIMETH,Ribosomal RNA adenine
methy,CUFF.41428.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G47420.1 | Symbols:  | Ribosomal RNA adenine dimethylase fami...   459   e-129
AT5G66360.2 | Symbols:  | Ribosomal RNA adenine dimethylase fami...   251   6e-67
AT5G66360.1 | Symbols:  | Ribosomal RNA adenine dimethylase fami...   212   4e-55
AT1G01860.1 | Symbols: PFC1 | Ribosomal RNA adenine dimethylase ...    97   1e-20

>AT2G47420.1 | Symbols:  | Ribosomal RNA adenine dimethylase family
           protein | chr2:19457574-19458777 FORWARD LENGTH=353
          Length = 353

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/336 (68%), Positives = 261/336 (77%), Gaps = 3/336 (0%)

Query: 16  STPYQGGISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKK 75
           S  YQGGISFHKSKGQHILKNPLLVD+IVQK+GIKSTDVILEIGPGTGNLTKKLLEAGK+
Sbjct: 19  SNHYQGGISFHKSKGQHILKNPLLVDSIVQKAGIKSTDVILEIGPGTGNLTKKLLEAGKE 78

Query: 76  VIAVEIDPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFK 135
           VIAVE+D RMVLELQRRFQGTP+S+RL VIQGDVL+TELP FDICVANIPYQISSPLTFK
Sbjct: 79  VIAVELDSRMVLELQRRFQGTPFSNRLKVIQGDVLKTELPRFDICVANIPYQISSPLTFK 138

Query: 136 LLSHQPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFRPPP 195
           LL H  +FRCA+IM+QREFAMRLVAQPGD LYCRL+VNTQL+AR+ HLLKVG+NNFRPPP
Sbjct: 139 LLFHPTSFRCAVIMYQREFAMRLVAQPGDNLYCRLSVNTQLYARVSHLLKVGKNNFRPPP 198

Query: 196 KVDSSVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKNVISLLEKNYKTVQA 255
           KVDSSVVRIEPR+P  +V +KEWDGFLR+CF RKNKTLGSIF+QK+V+S+LEKN+KT+QA
Sbjct: 199 KVDSSVVRIEPRRPGPQVNKKEWDGFLRVCFIRKNKTLGSIFKQKSVLSMLEKNFKTLQA 258

Query: 256 L--KLSQEGPLEETDTKVDFSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEFKDKVL 313
           +   L   G      T +D                                 SEFK+KV+
Sbjct: 259 VLASLQNNGEPALNTTSMDLGD-QSMGMEDDDNEMDDDDMEMDEGEGDGGETSEFKEKVM 317

Query: 314 SVLKEGDFEEKRSXXXXXXXXXXXXXXFNKAGIHFS 349
           +VLKEG FEEKRS              FNK+GIHF+
Sbjct: 318 NVLKEGGFEEKRSSKLSQQEFLYLLSLFNKSGIHFT 353


>AT5G66360.2 | Symbols:  | Ribosomal RNA adenine dimethylase family
           protein | chr5:26510329-26511711 FORWARD LENGTH=380
          Length = 380

 Score =  251 bits (641), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/334 (41%), Positives = 194/334 (58%), Gaps = 28/334 (8%)

Query: 20  QGGISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKKVIAV 79
             G+   KSKGQH+L N  ++D+IV+ S I+ TD +LEIGPGTGNLT KLLEA + V+AV
Sbjct: 58  HDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAV 117

Query: 80  EIDPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFKLLSH 139
           E+D RMV  L++R     ++ +LT+IQ DVL+T+ P+FD+ VANIPY ISSPL  KL+  
Sbjct: 118 ELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYG 177

Query: 140 QPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFRPPPKVDS 199
              FR A ++ Q+EF+ RL+A PGD  + RL VN +L A +  ++ V +  F PPPKVDS
Sbjct: 178 SNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVNVKLVADVKFVMDVSKREFVPPPKVDS 237

Query: 200 SVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKNVISLLE-----KNYKTVQ 254
           SV+RI P++   +V  +EW  F R CF +KNKTLGS+FRQK  +  L+     ++   V+
Sbjct: 238 SVIRITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSLSAGRHGSNVE 297

Query: 255 ALKLSQEGPLEETDTKVDFSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEFKDKVLS 314
              ++Q G   ++D + D                                 S FK++V+ 
Sbjct: 298 V--MNQTGGDSDSDVEED---------------------GKDDLLCLDTDASMFKERVIE 334

Query: 315 VLKEGDFEEKRSXXXXXXXXXXXXXXFNKAGIHF 348
           +L+   FEEKR               FN+AGI F
Sbjct: 335 ILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 368


>AT5G66360.1 | Symbols:  | Ribosomal RNA adenine dimethylase family
           protein | chr5:26510329-26511711 FORWARD LENGTH=352
          Length = 352

 Score =  212 bits (539), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 176/334 (52%), Gaps = 56/334 (16%)

Query: 20  QGGISFHKSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKKVIAV 79
             G+   KSKGQH+L N  ++D+IV+ S I+ TD +LEIGPGTGNLT KLLEA + V+AV
Sbjct: 58  HDGLFLCKSKGQHLLTNTRILDSIVRSSDIRPTDTVLEIGPGTGNLTMKLLEAAQNVVAV 117

Query: 80  EIDPRMVLELQRRFQGTPYSSRLTVIQGDVLRTELPYFDICVANIPYQISSPLTFKLLSH 139
           E+D RMV  L++R     ++ +LT+IQ DVL+T+ P+FD+ VANIPY ISSPL  KL+  
Sbjct: 118 ELDKRMVEILRKRVSDHGFADKLTIIQKDVLKTDFPHFDLVVANIPYNISSPLVAKLVYG 177

Query: 140 QPAFRCAIIMFQREFAMRLVAQPGDKLYCRLTVNTQLHARIFHLLKVGRNNFRPPPKVDS 199
              FR A ++ Q+EF+ RL+A PGD  + RL VN                          
Sbjct: 178 SNTFRSATLLLQKEFSRRLLANPGDSDFNRLAVN-------------------------- 211

Query: 200 SVVRIEPRKPRIEVKQKEWDGFLRICFNRKNKTLGSIFRQKNVISLLE-----KNYKTVQ 254
             V+I P++   +V  +EW  F R CF +KNKTLGS+FRQK  +  L+     ++   V+
Sbjct: 212 --VKITPKEIIPDVNVQEWLAFTRTCFGKKNKTLGSMFRQKKKVMELQSLSAGRHGSNVE 269

Query: 255 ALKLSQEGPLEETDTKVDFSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSEFKDKVLS 314
              ++Q G   ++D + D                                 S FK++V+ 
Sbjct: 270 V--MNQTGGDSDSDVEED---------------------GKDDLLCLDTDASMFKERVIE 306

Query: 315 VLKEGDFEEKRSXXXXXXXXXXXXXXFNKAGIHF 348
           +L+   FEEKR               FN+AGI F
Sbjct: 307 ILRTNGFEEKRPSKLSHRELLHLLSLFNQAGIFF 340


>AT1G01860.1 | Symbols: PFC1 | Ribosomal RNA adenine dimethylase
           family protein | chr1:304439-306275 REVERSE LENGTH=343
          Length = 343

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 26/229 (11%)

Query: 27  KSKGQHILKNPLLVDAIVQKSGIKSTDVILEIGPGTGNLTKKLLEAGKKVIAVEIDPRMV 86
           KS GQH + N  + D +   + +K  D +LEIGPGTG+LT  L+  G  V+A+E DP MV
Sbjct: 73  KSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAIEKDPHMV 132

Query: 87  LELQRRFQGTPYSSRLTVIQGDVLRTE-------------LPYFDICVA----NIPYQIS 129
             +  RF G   S +  V+Q D ++               L + D  +A    N+P+ IS
Sbjct: 133 DLVSERFAG---SDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLPFNIS 189

Query: 130 SPLTFKLLSHQPAFRCAIIMFQREFAMRLVAQPGDKL--YCRLTVNTQLHARIFHLLKVG 187
           + +   LL     F   +++ Q E A+RLV +P  +   Y  + +    ++   +  +V 
Sbjct: 190 TDVVKLLLPMGDIFSKVVLLLQDEAALRLV-EPALRTSEYRPINILINFYSEPEYNFRVP 248

Query: 188 RNNFRPPPKVDSSVVRIEPRKPRIEVKQKEWDGFLRI---CFNRKNKTL 233
           R NF P PKVD++VV  + + PR          F  +    FN K K L
Sbjct: 249 RENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKML 297