Miyakogusa Predicted Gene

Lj3g3v0807580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0807580.1 Non Chatacterized Hit- tr|K0SZ12|K0SZ12_THAOC
Uncharacterized protein OS=Thalassiosira oceanica
PE=4,30,0.00000000004,CrbC,Camphor resistance CrcB protein;
CRCB,Camphor resistance CrcB protein; seg,NULL,CUFF.41422.1
         (339 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41705.2 | Symbols:  | camphor resistance CrcB family protein...   254   4e-68
AT2G41705.1 | Symbols:  | camphor resistance CrcB family protein...   254   4e-68

>AT2G41705.2 | Symbols:  | camphor resistance CrcB family protein |
           chr2:17398083-17399910 FORWARD LENGTH=461
          Length = 461

 Score =  254 bits (650), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/303 (50%), Positives = 193/303 (63%), Gaps = 13/303 (4%)

Query: 41  PL-TSELRSPLFSNQREGSQDIKHELDKELSKSLHYALCLLHLAVFGILGVLTRYILGLL 99
           PL T  L SP  +N  +       E ++ L KSL Y  CL+HLAVFGI G +TRY+L  L
Sbjct: 112 PLPTKSLLSPEINNSGK-------EEERVLPKSLEYISCLIHLAVFGIFGAITRYLLQKL 164

Query: 100 FGPGIGRVTSDQTILYHDLPSNMVGSFVMGWLGVVFKEDISNVSEYLAIALTTGYLGSLT 159
           FGP   RVTSD +ILY DLPSNMVGSF+MGW GVVFK DI+ VSE++AI L+TGYLGSLT
Sbjct: 165 FGPTGARVTSDGSILYLDLPSNMVGSFLMGWFGVVFKADIARVSEFVAIGLSTGYLGSLT 224

Query: 160 TFSGWNQKMLEHSAAGNWLYSVLGYLIGLSLVAFASIISGIETAKGFRWLLSRPKMSSGS 219
           TFSGWNQKML+ SA G W+Y+VLG+L+GL L ++ SII G+ETAKGF+WLL R + SS  
Sbjct: 225 TFSGWNQKMLDLSADGQWVYAVLGFLLGLFLTSY-SIILGVETAKGFKWLLHR-RASSED 282

Query: 220 ETGRSKIN-IKCHLEAMXXXXXXXXXXXXXXXXXXXXDFKNG-EKSVVWIGCIVGPFGVW 277
           +    K+N  + H+ ++                    +F  G  ++ +W GC+V   GVW
Sbjct: 283 KFHCLKVNTFQSHIVSLTLMLLLLVALLTASSILLVKEFDKGTSEAQLWFGCLVAAPGVW 342

Query: 278 IX-XXXXXXXXXXXXXXXXXNWIPFGTLIANVSACCVMAALATTKKLVDTRNCDTIITGI 336
           +                    W+PFGTLIANV A CVMAALAT KK V+TR C+T+ + I
Sbjct: 343 LRWFLARLNGRGLGKDSQNLRWVPFGTLIANVVAACVMAALATLKKSVNTRTCNTVASSI 402

Query: 337 QFG 339
           QFG
Sbjct: 403 QFG 405


>AT2G41705.1 | Symbols:  | camphor resistance CrcB family protein |
           chr2:17398083-17399910 FORWARD LENGTH=461
          Length = 461

 Score =  254 bits (650), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 153/303 (50%), Positives = 193/303 (63%), Gaps = 13/303 (4%)

Query: 41  PL-TSELRSPLFSNQREGSQDIKHELDKELSKSLHYALCLLHLAVFGILGVLTRYILGLL 99
           PL T  L SP  +N  +       E ++ L KSL Y  CL+HLAVFGI G +TRY+L  L
Sbjct: 112 PLPTKSLLSPEINNSGK-------EEERVLPKSLEYISCLIHLAVFGIFGAITRYLLQKL 164

Query: 100 FGPGIGRVTSDQTILYHDLPSNMVGSFVMGWLGVVFKEDISNVSEYLAIALTTGYLGSLT 159
           FGP   RVTSD +ILY DLPSNMVGSF+MGW GVVFK DI+ VSE++AI L+TGYLGSLT
Sbjct: 165 FGPTGARVTSDGSILYLDLPSNMVGSFLMGWFGVVFKADIARVSEFVAIGLSTGYLGSLT 224

Query: 160 TFSGWNQKMLEHSAAGNWLYSVLGYLIGLSLVAFASIISGIETAKGFRWLLSRPKMSSGS 219
           TFSGWNQKML+ SA G W+Y+VLG+L+GL L ++ SII G+ETAKGF+WLL R + SS  
Sbjct: 225 TFSGWNQKMLDLSADGQWVYAVLGFLLGLFLTSY-SIILGVETAKGFKWLLHR-RASSED 282

Query: 220 ETGRSKIN-IKCHLEAMXXXXXXXXXXXXXXXXXXXXDFKNG-EKSVVWIGCIVGPFGVW 277
           +    K+N  + H+ ++                    +F  G  ++ +W GC+V   GVW
Sbjct: 283 KFHCLKVNTFQSHIVSLTLMLLLLVALLTASSILLVKEFDKGTSEAQLWFGCLVAAPGVW 342

Query: 278 IX-XXXXXXXXXXXXXXXXXNWIPFGTLIANVSACCVMAALATTKKLVDTRNCDTIITGI 336
           +                    W+PFGTLIANV A CVMAALAT KK V+TR C+T+ + I
Sbjct: 343 LRWFLARLNGRGLGKDSQNLRWVPFGTLIANVVAACVMAALATLKKSVNTRTCNTVASSI 402

Query: 337 QFG 339
           QFG
Sbjct: 403 QFG 405