Miyakogusa Predicted Gene

Lj3g3v0797530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0797530.1 tr|G7K2Z2|G7K2Z2_MEDTR Protein argonaute 4A
OS=Medicago truncatula GN=MTR_5g087890 PE=4
SV=1,54.44,2e-19,PAZ,Argonaute/Dicer protein, PAZ; SUBFAMILY NOT
NAMED,NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR,CUFF.41415.1
         (95 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27040.2 | Symbols: AGO4 | Argonaute family protein | chr2:11...   108   5e-25
AT2G27040.1 | Symbols: AGO4, OCP11 | Argonaute family protein | ...   108   5e-25
AT5G21030.1 | Symbols:  | PAZ domain-containing protein / piwi d...    97   3e-21
AT5G21150.1 | Symbols: AGO9 | Argonaute family protein | chr5:71...    96   5e-21
AT2G32940.1 | Symbols: AGO6 | Argonaute family protein | chr2:13...    89   6e-19

>AT2G27040.2 | Symbols: AGO4 | Argonaute family protein |
           chr2:11536795-11541503 REVERSE LENGTH=924
          Length = 924

 Score =  108 bits (271), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)

Query: 2   LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLR-HGKDANGEVQSSEITVYDYFKHNKKI 58
           LKNLRVK +    E+KI GLS+KPCR QTF L+    + NGE +++E+TV DYF+  + I
Sbjct: 318 LKNLRVKVSPSGQEFKITGLSDKPCREQTFELKKRNPNENGEFETTEVTVADYFRDTRHI 377

Query: 59  ELRYSADMPCINVGKPKRPSYFPVEV 84
           +L+YSAD+PCINVGKPKRP+Y P+E+
Sbjct: 378 DLQYSADLPCINVGKPKRPTYIPLEL 403


>AT2G27040.1 | Symbols: AGO4, OCP11 | Argonaute family protein |
           chr2:11536795-11541503 REVERSE LENGTH=924
          Length = 924

 Score =  108 bits (271), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)

Query: 2   LKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLR-HGKDANGEVQSSEITVYDYFKHNKKI 58
           LKNLRVK +    E+KI GLS+KPCR QTF L+    + NGE +++E+TV DYF+  + I
Sbjct: 318 LKNLRVKVSPSGQEFKITGLSDKPCREQTFELKKRNPNENGEFETTEVTVADYFRDTRHI 377

Query: 59  ELRYSADMPCINVGKPKRPSYFPVEV 84
           +L+YSAD+PCINVGKPKRP+Y P+E+
Sbjct: 378 DLQYSADLPCINVGKPKRPTYIPLEL 403


>AT5G21030.1 | Symbols:  | PAZ domain-containing protein / piwi
           domain-containing protein | chr5:7139892-7144272 REVERSE
           LENGTH=850
          Length = 850

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 3/85 (3%)

Query: 2   LKNLRVKA--NNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKIE 59
           LKNLRVK   +N EYKI GLS   C+ QTF+ +  ++ N E +  EITV DYF   ++IE
Sbjct: 273 LKNLRVKVLPSNQEYKITGLSGLHCKDQTFTWKK-RNQNREFEEVEITVSDYFTRIREIE 331

Query: 60  LRYSADMPCINVGKPKRPSYFPVEV 84
           LRYS  +PCINVGKP RP+YFP+E+
Sbjct: 332 LRYSGGLPCINVGKPNRPTYFPIEL 356


>AT5G21150.1 | Symbols: AGO9 | Argonaute family protein |
           chr5:7193472-7198113 FORWARD LENGTH=896
          Length = 896

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 4/85 (4%)

Query: 1   MLKNLRVK--ANNMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKI 58
           +LKNLRV+   +N EYKI GLSE  C+ Q F+ R   D  GE +  EITV +Y+K  + I
Sbjct: 292 VLKNLRVQITLSNREYKISGLSEHSCKDQLFTWRKPND-KGEFEEVEITVLNYYKE-RNI 349

Query: 59  ELRYSADMPCINVGKPKRPSYFPVE 83
           E+RYS D PCINVGKPKRP+YFP+E
Sbjct: 350 EVRYSGDFPCINVGKPKRPTYFPIE 374


>AT2G32940.1 | Symbols: AGO6 | Argonaute family protein |
           chr2:13972218-13976856 REVERSE LENGTH=878
          Length = 878

 Score = 89.0 bits (219), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/85 (57%), Positives = 58/85 (68%), Gaps = 4/85 (4%)

Query: 1   MLKNLRVKAN--NMEYKIIGLSEKPCRTQTFSLRHGKDANGEVQSSEITVYDYFKHNKKI 58
           MLK++RVKA   NME+KIIGLS KPC  Q FS++  KD   EV   EITVYDYFK     
Sbjct: 284 MLKHMRVKATHRNMEFKIIGLSSKPCNQQLFSMKI-KDGEREVPIREITVYDYFKQT-YT 341

Query: 59  ELRYSADMPCINVGKPKRPSYFPVE 83
           E   SA  PC++VGKP RP+Y P+E
Sbjct: 342 EPISSAYFPCLDVGKPDRPNYLPLE 366