Miyakogusa Predicted Gene

Lj3g3v0766140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0766140.1 tr|B7FMX0|B7FMX0_MEDTR NADPH:quinone
oxidoreductase OS=Medicago truncatula GN=MTR_8g039090 PE=2
SV=1,78.72,0,CHROMATE REDUCTASE,NULL; FMN_red,NADPH-dependent FMN
reductase; no description,NULL; Flavoproteins,N,CUFF.41363.1
         (198 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27890.1 | Symbols: NQR | NADPH:quinone oxidoreductase | chr3...   288   2e-78

>AT3G27890.1 | Symbols: NQR | NADPH:quinone oxidoreductase |
           chr3:10350807-10351938 REVERSE LENGTH=196
          Length = 196

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/194 (74%), Positives = 166/194 (85%)

Query: 4   AGGASPPVINVAALSGSLRKGSYHNGLIRSAIELSKGDLQGIQIEYIDISALPFLNTDLE 63
           A  A  P+I VAALSGSLRK S+H GL+R+AI+L+K  + G+QIEYIDIS LP +NTDLE
Sbjct: 3   AVTAIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLE 62

Query: 64  EKGRYPPEVEAFRSKILLADSILFASPEYNYSVTAPLKNAIDWASRPPNVWAGKPAAIVS 123
             G YPP VEAFR KIL ADSILFASPEYN+SV+APLKNA+DWASRPPNVWA KPAAI+S
Sbjct: 63  VNGTYPPVVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAIIS 122

Query: 124 AGGDFGGGRSHYHLRQIGVYLDLHFINKPEFFLHAFQPPAKFDSDGNLIDENAKNKLKAI 183
            GG FGGGRS YHLRQIGV+LDLHFINKPEF L+AFQPP KFD++GNL+DE  K +LK +
Sbjct: 123 TGGGFGGGRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKERLKQV 182

Query: 184 LLSLQAFTLQLQGR 197
           LLSLQAFTL+LQG+
Sbjct: 183 LLSLQAFTLRLQGK 196