Miyakogusa Predicted Gene

Lj3g3v0755510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0755510.1 Non Chatacterized Hit- tr|I1K7Y8|I1K7Y8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38978
PE,81.25,0.0000003, ,CUFF.41378.1
         (99 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein ...    49   5e-07

>AT1G47380.1 | Symbols:  | Protein phosphatase 2C family protein |
          chr1:17373004-17375305 REVERSE LENGTH=428
          Length = 428

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/32 (62%), Positives = 27/32 (84%)

Query: 3  EASENKKGEDLMLLKIECQRVVGDGVCTYSVF 34
          + +++KKGED  L+K ECQRV+GDGV T+SVF
Sbjct: 34 QHNQSKKGEDFTLVKTECQRVMGDGVTTFSVF 65