Miyakogusa Predicted Gene

Lj3g3v0743580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0743580.1 Non Chatacterized Hit- tr|I1LYK6|I1LYK6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35918
PE,92.57,0,Prefoldin,Prefoldin; coiled-coil,NULL; PREFOLDIN SUBUNIT
2,NULL; no description,NULL; Prefoldin_2,Pr,CUFF.41708.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22480.1 | Symbols: PDF2 | prefoldin 2 | chr3:7969080-7969526...   195   2e-50
AT3G22480.2 | Symbols: PDF2 | prefoldin 2 | chr3:7969080-7969526...   195   2e-50

>AT3G22480.1 | Symbols: PDF2 | prefoldin 2 | chr3:7969080-7969526
           FORWARD LENGTH=148
          Length = 148

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/139 (69%), Positives = 118/139 (84%), Gaps = 1/139 (0%)

Query: 47  KEPVNEQAVANTYAAMRSELNQYYSKITELEMEVSEHTLVLNAIQPLDQSRRCYRMIGGV 106
           +EP NEQAV N Y   RSEL+Q YS IT+LEM+VSEH+LV+NAIQPLDQSR+C+RMIGGV
Sbjct: 11  REPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGV 70

Query: 107 LVERTIKEVMPAVQRNKEGLEEVVARLNEALEKKKKEISDFEAKYKIRIRKADAEVKDES 166
           LVERTIKEV+PAVQRNK+GLEEVV +L E LEKKKK++++FEAKYKIRI K + + K+  
Sbjct: 71  LVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGG 129

Query: 167 GRKEGSAQGVLVGPAGGSE 185
            +KEG+AQGVLVG A  S+
Sbjct: 130 NKKEGNAQGVLVGAASSSQ 148


>AT3G22480.2 | Symbols: PDF2 | prefoldin 2 | chr3:7969080-7969526
           FORWARD LENGTH=148
          Length = 148

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 97/139 (69%), Positives = 118/139 (84%), Gaps = 1/139 (0%)

Query: 47  KEPVNEQAVANTYAAMRSELNQYYSKITELEMEVSEHTLVLNAIQPLDQSRRCYRMIGGV 106
           +EP NEQAV N Y   RSEL+Q YS IT+LEM+VSEH+LV+NAIQPLDQSR+C+RMIGGV
Sbjct: 11  REPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGV 70

Query: 107 LVERTIKEVMPAVQRNKEGLEEVVARLNEALEKKKKEISDFEAKYKIRIRKADAEVKDES 166
           LVERTIKEV+PAVQRNK+GLEEVV +L E LEKKKK++++FEAKYKIRI K + + K+  
Sbjct: 71  LVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITKQE-DNKEGG 129

Query: 167 GRKEGSAQGVLVGPAGGSE 185
            +KEG+AQGVLVG A  S+
Sbjct: 130 NKKEGNAQGVLVGAASSSQ 148