Miyakogusa Predicted Gene

Lj3g3v0730430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0730430.1 Non Chatacterized Hit- tr|Q5JLB3|Q5JLB3_ORYSJ
Putative uncharacterized protein P0413C03.35 OS=Oryza
,29.72,0.00000000000004, ,CUFF.41245.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07150.1 | Symbols:  | unknown protein; Has 19 Blast hits to ...   155   2e-38

>AT3G07150.1 | Symbols:  | unknown protein; Has 19 Blast hits to 19
           proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:2263806-2264576 REVERSE LENGTH=199
          Length = 199

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/220 (46%), Positives = 138/220 (62%), Gaps = 30/220 (13%)

Query: 7   REIKLLCPSLSKVTTQLVVSDEQRIDLGAIARAFGLDASTMRLNGHFISRGVDLVSSSVT 66
           R+IKL CPS+SK+   +  +DE ++D  AIA AFGL+ ST++LNGHFISRG DLV++ VT
Sbjct: 8   RKIKLFCPSVSKIVEWVAWNDE-KLDFRAIAAAFGLEPSTVKLNGHFISRGFDLVATCVT 66

Query: 67  WKSLLSFFSARGLSTGKNNRDALVATGKFCKVGNKRGHDSQDYQCGTSKVTEDEHACSSR 126
           W+SLL+FFSARGLSTGK+  DAL+  GK  K+G KR           S   ED  AC+  
Sbjct: 67  WQSLLTFFSARGLSTGKHEADALLVHGKLSKLGTKRAR---------SDPLED-FACNDL 116

Query: 127 GIQLEAINLLKNKKLR-QSNLGEILNGLSCKRKQLFEDANLLNFKKLKVNDEKSGIRDKV 185
           G       L+K KKL+ + ++GE L     KRK L ED++ L  KKLK+N +        
Sbjct: 117 G-------LIKTKKLKDKCSVGESLISGCNKRKLLSEDSHPL--KKLKLNMD-------- 159

Query: 186 DDLPRSISPSQITCNYMSKN-LKRIREDEAIVAANYKRIR 224
           D    S S + + C++MS N LKR RED+ I +A+ K+IR
Sbjct: 160 DSFGGSGSKTPLKCSFMSDNGLKRTREDDMIASASCKKIR 199