Miyakogusa Predicted Gene

Lj3g3v0719960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0719960.1 Non Chatacterized Hit- tr|I1JWN8|I1JWN8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,55.71,1e-18,DUF1675,Protein of unknown function DUF1675;
seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; F,CUFF.41212.1
         (369 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07250.1 | Symbols:  | nuclear transport factor 2 (NTF2) fami...   119   3e-27
AT3G29575.4 | Symbols: AFP3 | ABI five binding protein 3 | chr3:...   112   5e-25
AT3G29575.3 | Symbols: AFP3 | ABI five binding protein 3 | chr3:...   112   5e-25
AT3G29575.1 | Symbols: AFP3 | ABI five binding protein 3 | chr3:...   112   5e-25
AT1G13740.1 | Symbols: AFP2 | ABI five binding protein 2 | chr1:...    96   3e-20
AT1G69260.1 | Symbols: AFP1 | ABI five binding protein | chr1:26...    94   2e-19
AT3G02140.1 | Symbols: TMAC2, AFP4 | AFP2 (ABI five-binding prot...    77   1e-14
AT4G28910.3 | Symbols: NINJA | novel interactor of JAZ | chr4:14...    75   7e-14
AT4G28910.1 | Symbols: NINJA | novel interactor of JAZ | chr4:14...    75   7e-14
AT4G28910.2 | Symbols: NINJA | novel interactor of JAZ | chr4:14...    75   7e-14

>AT3G07250.1 | Symbols:  | nuclear transport factor 2 (NTF2) family
           protein / RNA recognition motif (RRM)-containing protein
           | chr3:2300579-2308305 REVERSE LENGTH=1294
          Length = 1294

 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/101 (58%), Positives = 75/101 (74%), Gaps = 9/101 (8%)

Query: 267 SNENSSNGTLKESKDEILGKPPLPKPLSQA--SSLP--QMPYVSTKGNGPNGRTVNGFLY 322
           + E S++   KES     GKPP P   S    S LP  QMP V++ GNGP G+TVNGFLY
Sbjct: 186 TQEWSNSSVTKES-----GKPPKPHTNSNGNGSLLPFAQMPCVTSTGNGPEGKTVNGFLY 240

Query: 323 RYTNSEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLKHITV 363
           RY+ SE+SI+CVCHG++FSPAEF+ HAGGT+++HPL+HITV
Sbjct: 241 RYSKSEISIICVCHGTSFSPAEFIVHAGGTNVSHPLRHITV 281


>AT3G29575.4 | Symbols: AFP3 | ABI five binding protein 3 |
           chr3:11382416-11383657 REVERSE LENGTH=231
          Length = 231

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSE-VSIVCVCHGSTFSPAEFVQHAGGTDITHP 357
           +  MP+VST G+GPNG+ +NGFLYRY   E V IVCVCHGS  SPAEFV+HAGG D+ HP
Sbjct: 160 IEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHP 219

Query: 358 LKHITVIPSAF 368
           LKHI V PS F
Sbjct: 220 LKHIVVNPSPF 230


>AT3G29575.3 | Symbols: AFP3 | ABI five binding protein 3 |
           chr3:11382416-11383657 REVERSE LENGTH=231
          Length = 231

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSE-VSIVCVCHGSTFSPAEFVQHAGGTDITHP 357
           +  MP+VST G+GPNG+ +NGFLYRY   E V IVCVCHGS  SPAEFV+HAGG D+ HP
Sbjct: 160 IEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHP 219

Query: 358 LKHITVIPSAF 368
           LKHI V PS F
Sbjct: 220 LKHIVVNPSPF 230


>AT3G29575.1 | Symbols: AFP3 | ABI five binding protein 3 |
           chr3:11382416-11383657 REVERSE LENGTH=231
          Length = 231

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 55/71 (77%), Gaps = 1/71 (1%)

Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNSE-VSIVCVCHGSTFSPAEFVQHAGGTDITHP 357
           +  MP+VST G+GPNG+ +NGFLYRY   E V IVCVCHGS  SPAEFV+HAGG D+ HP
Sbjct: 160 IEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCVCHGSFLSPAEFVKHAGGGDVAHP 219

Query: 358 LKHITVIPSAF 368
           LKHI V PS F
Sbjct: 220 LKHIVVNPSPF 230


>AT1G13740.1 | Symbols: AFP2 | ABI five binding protein 2 |
           chr1:4713969-4715158 FORWARD LENGTH=348
          Length = 348

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 291 KPLSQASSLPQMPYVSTKGNGPNGRTVNGFLYRY-TNSEVSIVCVCHGSTFSPAEFVQHA 349
           K ++ ++ L  MP V TKG+GPNGR V+G LY+Y    EV I+C+CHGS  +PAEFV+H 
Sbjct: 268 KGMATSTGLVDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCICHGSFLTPAEFVKHG 327

Query: 350 GGTDITHPLKHITVIPSA 367
           GG D+  PL+HI V  S+
Sbjct: 328 GGGDVDRPLRHIVVNTSS 345


>AT1G69260.1 | Symbols: AFP1 | ABI five binding protein |
           chr1:26039314-26040570 FORWARD LENGTH=345
          Length = 345

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 295 QASSLPQMPYVSTKGNGPNGRTVNGFLYRY-TNSEVSIVCVCHGSTFSPAEFVQHAGGTD 353
           Q     +MP V TKG+GPNG+ V+G LYRY +  EV I+CVCHG   SPA+FV+HAGG  
Sbjct: 267 QGKGKSEMPCVFTKGDGPNGKRVDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPH 326

Query: 354 ITHPLKHITV 363
           + HPL+HI V
Sbjct: 327 VDHPLRHIVV 336


>AT3G02140.1 | Symbols: TMAC2, AFP4 | AFP2 (ABI five-binding protein
           2) family protein | chr3:385478-386437 REVERSE
           LENGTH=319
          Length = 319

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 11/80 (13%)

Query: 299 LPQMPYVSTKGNGPNGRTVNGFLYRYTNS--EVSIVCVCHGSTFSPAEFVQHAGGT---- 352
           L  MP VST+  G +G+ V GFLY Y  +  EV IVCVCHGS  SPAEFV+H GGT    
Sbjct: 238 LEDMPCVSTRDVGADGKRVEGFLYWYGGNKEEVKIVCVCHGSFLSPAEFVRHGGGTVSDD 297

Query: 353 ----DITHPLKHITV-IPSA 367
                + +PL+HI V +PS+
Sbjct: 298 DGGDVMINPLRHIVVKLPSS 317


>AT4G28910.3 | Symbols: NINJA | novel interactor of JAZ |
           chr4:14264330-14265680 REVERSE LENGTH=425
          Length = 425

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 300 PQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
           P +P+VST G+GP+GRT++G  YRY  +++ IVC CHGS  SP EFV+HA
Sbjct: 356 PNLPWVSTTGSGPHGRTISGVTYRYNANQIKIVCACHGSHMSPEEFVRHA 405


>AT4G28910.1 | Symbols: NINJA | novel interactor of JAZ |
           chr4:14264330-14265680 REVERSE LENGTH=425
          Length = 425

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 300 PQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
           P +P+VST G+GP+GRT++G  YRY  +++ IVC CHGS  SP EFV+HA
Sbjct: 356 PNLPWVSTTGSGPHGRTISGVTYRYNANQIKIVCACHGSHMSPEEFVRHA 405


>AT4G28910.2 | Symbols: NINJA | novel interactor of JAZ |
           chr4:14264330-14265680 REVERSE LENGTH=425
          Length = 425

 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 300 PQMPYVSTKGNGPNGRTVNGFLYRYTNSEVSIVCVCHGSTFSPAEFVQHA 349
           P +P+VST G+GP+GRT++G  YRY  +++ IVC CHGS  SP EFV+HA
Sbjct: 356 PNLPWVSTTGSGPHGRTISGVTYRYNANQIKIVCACHGSHMSPEEFVRHA 405