Miyakogusa Predicted Gene

Lj3g3v0718660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718660.1 Non Chatacterized Hit- tr|I3SQW6|I3SQW6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.25,0,Dxr:
1-deoxy-D-xylulose 5-phosphate reductoisomera,1-deoxy-D-xylulose
5-phosphate reductoisomerase;
,NODE_783_length_1406_cov_700.189880.path1.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62790.2 | Symbols: DXR | 1-deoxy-D-xylulose 5-phosphate redu...   460   e-130
AT5G62790.1 | Symbols: DXR, PDE129 | 1-deoxy-D-xylulose 5-phosph...   459   e-130

>AT5G62790.2 | Symbols: DXR | 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase | chr5:25214358-25217289 REVERSE
           LENGTH=497
          Length = 497

 Score =  460 bits (1183), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/261 (80%), Positives = 241/261 (92%)

Query: 1   MIAGAPFILPLAHKHNIKFLPADSEHSAIFQCIQGLPIGALRKIQLTASGGAFREWPVEK 60
           +IAG PF+LPLA+KHN+K LPADSEHSAIFQCIQGLP GALRKI LTASGGAFR+WPVEK
Sbjct: 227 LIAGGPFVLPLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEK 286

Query: 61  MKDIKVSDALKHPIWTLGRKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 120
           +K++KV+DALKHP W +G+KITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH
Sbjct: 287 LKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 346

Query: 121 SMIETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITYPRLDLTKYGKLTFEAPNTAK 180
           SMIETQDSSV+AQLG PDMRLP+LYT+SWP+R+ CSE+T+PRLDL K G LTF+ P+  K
Sbjct: 347 SMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVK 406

Query: 181 FPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKISYLDIFKVVELTCDEHQKELVAF 240
           +PS++L YAAGRAGGTMTGVLSAANEKAVE+F++EKISYLDIFKVVELTCD+H+ ELV  
Sbjct: 407 YPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTS 466

Query: 241 PSLEEIVHYDQWARQYAAGLQ 261
           PSLEEIVHYD WAR+YAA +Q
Sbjct: 467 PSLEEIVHYDLWAREYAANVQ 487


>AT5G62790.1 | Symbols: DXR, PDE129 | 1-deoxy-D-xylulose 5-phosphate
           reductoisomerase | chr5:25214358-25217292 REVERSE
           LENGTH=477
          Length = 477

 Score =  459 bits (1182), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/261 (80%), Positives = 241/261 (92%)

Query: 1   MIAGAPFILPLAHKHNIKFLPADSEHSAIFQCIQGLPIGALRKIQLTASGGAFREWPVEK 60
           +IAG PF+LPLA+KHN+K LPADSEHSAIFQCIQGLP GALRKI LTASGGAFR+WPVEK
Sbjct: 207 LIAGGPFVLPLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEK 266

Query: 61  MKDIKVSDALKHPIWTLGRKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 120
           +K++KV+DALKHP W +G+KITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH
Sbjct: 267 LKEVKVADALKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIH 326

Query: 121 SMIETQDSSVIAQLGIPDMRLPLLYTLSWPERIYCSEITYPRLDLTKYGKLTFEAPNTAK 180
           SMIETQDSSV+AQLG PDMRLP+LYT+SWP+R+ CSE+T+PRLDL K G LTF+ P+  K
Sbjct: 327 SMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVK 386

Query: 181 FPSVNLCYAAGRAGGTMTGVLSAANEKAVELFVEEKISYLDIFKVVELTCDEHQKELVAF 240
           +PS++L YAAGRAGGTMTGVLSAANEKAVE+F++EKISYLDIFKVVELTCD+H+ ELV  
Sbjct: 387 YPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTS 446

Query: 241 PSLEEIVHYDQWARQYAAGLQ 261
           PSLEEIVHYD WAR+YAA +Q
Sbjct: 447 PSLEEIVHYDLWAREYAANVQ 467