Miyakogusa Predicted Gene

Lj3g3v0718650.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718650.2 Non Chatacterized Hit- tr|I1JMK1|I1JMK1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.18,0,TGF BETA
RECEPTOR ASSOCIATED PROTEIN RELATED,NULL; CNH DOMAIN CONTAINING,NULL;
Vps39_2,Vacuolar sort,CUFF.41189.2
         (575 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 | chr1:808...   699   0.0  
AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 | c...    52   2e-06

>AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 |
           chr1:8083400-8088867 FORWARD LENGTH=961
          Length = 961

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/538 (66%), Positives = 431/538 (80%), Gaps = 35/538 (6%)

Query: 47  NRYWGLHPPPAPLEDVVDDGLMTIQRASFLRKAGVETIVDNDLFLNPPNRADLLESAIKN 106
           NRYWGLHPPPAP EDVVD+GLM IQRA+FLRKAG++T VD + F +PP+RADLL+SAIKN
Sbjct: 450 NRYWGLHPPPAPFEDVVDNGLMAIQRANFLRKAGMDTPVDEEFFSDPPSRADLLDSAIKN 509

Query: 107 ISRYLEDCREKNLSQSVREGVDTLLMYLYRALNNVEDMERLASSTNWCVVEELEHMLEES 166
           I+RYLE  REK L+  VREG+DTLLM LYRALN VEDME LASS N CVVEELE +L ES
Sbjct: 510 ITRYLEISREKGLTLPVREGIDTLLMLLYRALNRVEDMENLASSGNNCVVEELETLLTES 569

Query: 167 GHLRTLAFLYASKGMSSKAVSIWRILARNYSSGLWKGPALENNIPDSGEN---LISGKAI 223
           GHLRTLAFLYA+KGM +KA++IWR+  +NYSSGLW+    ++ +P   +N    +SGK  
Sbjct: 570 GHLRTLAFLYATKGMGAKALAIWRLFTKNYSSGLWQDS--DDLVPYLHDNELIRLSGKEA 627

Query: 224 AAAEASKILEGSSDQDLILQHLGWISDISQVLAVDVLTSNKREIQLSPDEVVTSIDPQKV 283
           AAAEA++ILE   D +L LQHL WI+D++ + A+ VLTS+KR  +LSP++V+ +IDP+KV
Sbjct: 628 AAAEAARILEEPCDPELALQHLSWIADVNPLFAIQVLTSDKRTEELSPEQVIQAIDPKKV 687

Query: 284 EILQRYLQWLIEEQDCIDTQFHTVYALSLAKSAIEAFESEN------VDSGNIETKRLSM 337
           EI+QRY QWLIEE+D  D Q HT YALSLA+SA+E  E +N      V +G+ E    ++
Sbjct: 688 EIIQRYFQWLIEERDYTDPQLHTSYALSLARSALECVEVQNGIQEADVPNGS-EAHDSNV 746

Query: 338 LTDSIFQTTVRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILA 397
            + S+F+  VRERLQ FLQSSDLYDPEE+L+L+EGSELWLEKAILYRR+G+ETLVLQ   
Sbjct: 747 GSISLFEVDVRERLQAFLQSSDLYDPEEILELVEGSELWLEKAILYRRIGKETLVLQ--- 803

Query: 398 LKLEDSEAAEQYCAEIGRADAYMQLLDMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVL 457
                                   LLDMYLDPQ+GK+PMF AAVRLLHNHGESLDPLQVL
Sbjct: 804 --------------------ILALLLDMYLDPQNGKEPMFKAAVRLLHNHGESLDPLQVL 843

Query: 458 EKLSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHVQIND 517
           +KLSPDMPL+LAS+T+LRM RARVHHHRQGQIVHN+SRA+D+D+RL+RL+ERSRH+QIND
Sbjct: 844 DKLSPDMPLKLASDTILRMLRARVHHHRQGQIVHNISRALDVDSRLARLEERSRHMQIND 903

Query: 518 ESLCDSCNARLGTKLFAMYPDDCVVCYKCYRRQGESVSVSGRNFKEDVLIKPGWVVSR 575
           ESLCDSC ARLGTKLFAMYPDD +VCYKCYRR GES SV+GR+FK DVLIKPGW+V+R
Sbjct: 904 ESLCDSCYARLGTKLFAMYPDDTIVCYKCYRRLGESKSVTGRDFKRDVLIKPGWLVNR 961


>AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 |
           chr4:17272088-17276524 REVERSE LENGTH=1000
          Length = 1000

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 436 MFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSR 495
           M +  + LL    E ++  Q L+ L  +  L      L  + R     HR   ++ +L +
Sbjct: 870 MISEVLDLLSQRWERINGAQALKLLPRETKLHNLLPFLAPLLRNSSEAHRNFSVIKSLRQ 929

Query: 496 AVDIDARLSRLDERSRHVQINDESLCDSCNARLGTKLFAMYPD-DCVVCYKCYR 548
           + ++  +      R    Q+  ES+C  CN ++GT +FA+YP+   +V + C+R
Sbjct: 930 SENLQVKEELYKHRKGVAQVTSESMCSLCNKKIGTSVFAVYPNGKTLVHFVCFR 983