Miyakogusa Predicted Gene

Lj3g3v0718650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718650.1 Non Chatacterized Hit- tr|I1JMK1|I1JMK1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,79.32,0,TGF BETA
RECEPTOR ASSOCIATED PROTEIN RELATED,NULL; CNH DOMAIN CONTAINING,NULL;
Vps39_2,Vacuolar sort,CUFF.41189.1
         (992 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 | chr1:808...  1092   0.0  
AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 | c...    52   2e-06

>AT1G22860.1 | Symbols:  | Vacuolar sorting protein 39 |
           chr1:8083400-8088867 FORWARD LENGTH=961
          Length = 961

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1006 (57%), Positives = 737/1006 (73%), Gaps = 66/1006 (6%)

Query: 7   STTRIVMEPLSQFDISTHSRTTTVRSLAIATLPNSHHHRAVLYVGTHSGTLFSLSADTTV 66
           S +R V+E  ++FD+    +   +R+L+++ + +S   + ++Y+GT+SG+L  LS DT  
Sbjct: 2   SKSRAVVELTARFDLGGDDK---IRALSLSPISDS---QTLVYLGTYSGSLILLSLDTLT 55

Query: 67  QNGDSTSFLRKLSFLRXXXXXXXXXXXXXXXXXXXXXXXXSEGSLFLVDSELSNRAVKLG 126
              ++ S L  +S                             G LFL+DS LS  A +LG
Sbjct: 56  ---NTVSRLASVSL-----SPSPVESIFVLGEERGRVLALCNGYLFLLDSLLSQPAKRLG 107

Query: 127 -FSKGVGVVTRR----KLRSXXXXXXXXXXXASNSQRFLQKLGG------LRLKEGEVLQ 175
              KG+ V+ +R       S           +S+S++FLQ LG       +R  +    +
Sbjct: 108 GLLKGINVIAKRVRGRDSSSTDLLPSEISTDSSSSKKFLQLLGAGNLVSDVRGNDSRHER 167

Query: 176 GGEGGCVLALAIGRRLVIVELVLGNRGGKSDKDGNGSLVVLKEIQCVDGVVSTMLWIDDS 235
             +G  V A+AIG R++++EL    + G S     GS VVLKEI  + G+  T++W+DD 
Sbjct: 168 VQQGHYVFAVAIGERMLLIELQCAEKEGLS-----GSFVVLKEILGIGGI-KTLVWLDDY 221

Query: 236 IIVGTVNGYSLISCVSGQSSVIFSLPDVSRPPRLKLLHKEWRVLLLVDNVGIIVDAHGQP 295
           +I GTV GYSLISCV+G S VIF+LPDVS PP LKLL KEW+VLLLVDNVG++VD +GQP
Sbjct: 222 VIAGTVKGYSLISCVTGLSGVIFTLPDVSGPPLLKLLCKEWKVLLLVDNVGVVVDTNGQP 281

Query: 296 VGGSLVFRHGLDSVGELSSYVVIVSDGKIELYHKKNGSCVQVLPFGGEGIGPCIVASEEG 355
           +GGSLVFR   DSVGELS Y+V V DGK+E++ KK+G+CVQ + FG +G GP ++A++E 
Sbjct: 282 IGGSLVFRRRPDSVGELSFYLVTVGDGKMEIHQKKSGACVQSVSFGPQGCGPSLLAADEA 341

Query: 356 RGGELVAVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEELESEGEMSKDLLSFVH 415
             G L+ V T +K++ Y+++P  EQIKDLLRKK Y+  ISLVEEL+S+GE+SKD+LSF+H
Sbjct: 342 GDGNLLVVTTLSKLIFYRRVPYEEQIKDLLRKKRYRETISLVEELDSQGEISKDMLSFLH 401

Query: 416 AQVGFLLLFDLHFEEAVDHFLRSETMEPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAP 475
           AQ+G+LLLFDL FEEAV+ FL+SE MEPSEVFPFIMRDPNRWSL+VPRNRYWGLHPPPAP
Sbjct: 402 AQIGYLLLFDLRFEEAVNQFLKSEKMEPSEVFPFIMRDPNRWSLVVPRNRYWGLHPPPAP 461

Query: 476 LEDVVDDGLMTIQRASFLRKAGVETIVDNDLFLNPPNRADLLESAIKNISRYLEDCREKN 535
            EDVVD+GLM IQRA+FLRKAG++T VD + F +PP+RADLL+SAIKNI+RYLE  REK 
Sbjct: 462 FEDVVDNGLMAIQRANFLRKAGMDTPVDEEFFSDPPSRADLLDSAIKNITRYLEISREKG 521

Query: 536 LSQSVREGVDTLLMYLYRALNNVEDMERLASSTNWCVVEELEHMLEESGHLRTLAFLYAS 595
           L+  VREG+DTLLM LYRALN VEDME LASS N CVVEELE +L ESGHLRTLAFLYA+
Sbjct: 522 LTLPVREGIDTLLMLLYRALNRVEDMENLASSGNNCVVEELETLLTESGHLRTLAFLYAT 581

Query: 596 KGMSSKAVSIWRILARNYSSGLWKGPALENNIPDSGEN---LISGKAIAAAEASKILEGS 652
           KGM +KA++IWR+  +NYSSGLW+    ++ +P   +N    +SGK  AAAEA++ILE  
Sbjct: 582 KGMGAKALAIWRLFTKNYSSGLWQDS--DDLVPYLHDNELIRLSGKEAAAAEAARILEEP 639

Query: 653 SDQDLILQHLGWISDISQVLAVDVLTSNKREIQLSPDEVVTSIDPQKVEILQRYLQWLIE 712
            D +L LQHL WI+D++ + A+ VLTS+KR  +LSP++V+ +IDP+KVEI+QRY QWLIE
Sbjct: 640 CDPELALQHLSWIADVNPLFAIQVLTSDKRTEELSPEQVIQAIDPKKVEIIQRYFQWLIE 699

Query: 713 EQDCIDTQFHTVYALSLAKSAIEAFESEN------VDSGNIETKRLSMLTDSIFQTTVRE 766
           E+D  D Q HT YALSLA+SA+E  E +N      V +G+ E    ++ + S+F+  VRE
Sbjct: 700 ERDYTDPQLHTSYALSLARSALECVEVQNGIQEADVPNGS-EAHDSNVGSISLFEVDVRE 758

Query: 767 RLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQY 826
           RLQ FLQSSDLYDPEE+L+L+EGSELWLEKAILYRR+G+ETLV                 
Sbjct: 759 RLQAFLQSSDLYDPEEILELVEGSELWLEKAILYRRIGKETLV----------------- 801

Query: 827 CAEIGRADAYMQLLDMYLDPQDGKDPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLA 886
                       LLDMYLDPQ+GK+PMF AAVRLLHNHGESLDPLQVL+KLSPDMPL+LA
Sbjct: 802 ------LQILALLLDMYLDPQNGKEPMFKAAVRLLHNHGESLDPLQVLDKLSPDMPLKLA 855

Query: 887 SETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHVQINDESLCDSCNARLG 946
           S+T+LRM RARVHHHRQGQIVHN+SRA+D+D+RL+RL+ERSRH+QINDESLCDSC ARLG
Sbjct: 856 SDTILRMLRARVHHHRQGQIVHNISRALDVDSRLARLEERSRHMQINDESLCDSCYARLG 915

Query: 947 TKLFAMYPDDCVVCYKCYRRQGESVSVSGRNFKEDVLIKPGWVVSR 992
           TKLFAMYPDD +VCYKCYRR GES SV+GR+FK DVLIKPGW+V+R
Sbjct: 916 TKLFAMYPDDTIVCYKCYRRLGESKSVTGRDFKRDVLIKPGWLVNR 961


>AT4G36630.1 | Symbols: EMB2754 | Vacuolar sorting protein 39 |
           chr4:17272088-17276524 REVERSE LENGTH=1000
          Length = 1000

 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 853 MFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASETLLRMFRARVHHHRQGQIVHNLSR 912
           M +  + LL    E ++  Q L+ L  +  L      L  + R     HR   ++ +L +
Sbjct: 870 MISEVLDLLSQRWERINGAQALKLLPRETKLHNLLPFLAPLLRNSSEAHRNFSVIKSLRQ 929

Query: 913 AVDIDARLSRLDERSRHVQINDESLCDSCNARLGTKLFAMYPD-DCVVCYKCYR 965
           + ++  +      R    Q+  ES+C  CN ++GT +FA+YP+   +V + C+R
Sbjct: 930 SENLQVKEELYKHRKGVAQVTSESMCSLCNKKIGTSVFAVYPNGKTLVHFVCFR 983