Miyakogusa Predicted Gene

Lj3g3v0718540.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0718540.2 Non Chatacterized Hit- tr|I1K261|I1K261_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,71.47,0,ZF_BED,Zinc finger, BED-type predicted; zf-BED,Zinc
finger, BED-type predicted; SUBFAMILY NOT NAMED,,CUFF.41180.2
         (449 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...   201   8e-52
AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...    93   4e-19

>AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr3:14321838-14323928 FORWARD LENGTH=696
          Length = 696

 Score =  201 bits (511), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 226/450 (50%), Gaps = 29/450 (6%)

Query: 22  ELVQPDSSQLQEN--EQGND--LVGEEAXXXXXXXXTSSVWEDFYEVNLVGGKMKAVCKY 77
           E+  P++  ++E   E  ND  +V  E          S VWE F    +     +A CK 
Sbjct: 31  EIRSPETQPIEETALEVYNDTEMVSPETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKG 90

Query: 78  CKQKFATSGVG--ASTSHLRRHGEVCTQKSLQKASEKKQSVI---PFQP----------- 121
           C Q FA S     A TSHL+RH    T  +L    +   + +   P+ P           
Sbjct: 91  CNQSFAYSNGNKVAGTSHLKRHIFKGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRS 150

Query: 122 -SNGNPFIISGARYNNEKMREIIASAIMVHEMPFNVVEDEVWMWAFQYANSDFTKVTRKT 180
            +N +P++     +N +K R+ IA  I++H+ P ++V+   ++   Q     F  V+   
Sbjct: 151 QNNASPYVA----FNQDKCRQEIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNN 206

Query: 181 IRKDCLALYEAEKK-ILKTMLNSVNKISLTTDMWKSSHKVTEYMVLTGHFIDVGWKLQKR 239
           ++ DC+A Y AEK+ ++K++     +  LT D W S   +  Y+ +T H+ID  WK+QK+
Sbjct: 207 VQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSKLTLG-YVFITAHYIDSDWKIQKK 265

Query: 240 VLSFVKVPAPRRGVDVADAIFKCLKVWGLENKVFSVSVDNAAYNDTCLKNLKDTLSLSSK 299
           +L+ +    P     ++ A+  C+  WGLE K+F+V+ ++ A N + ++N++  L + + 
Sbjct: 266 LLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPASN-SAVENIRPQLCIKNP 324

Query: 300 LFLNGALFHVRCCAHILNLLVQDGLGKIKSIIFNVRESVKYINYNDARLKNFCDVVEQKR 359
             L+G L    C A     L +D L K K +I N+R+SVK++  +++  + F ++ EQ +
Sbjct: 325 GILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQ 384

Query: 360 LKERKLI-MDCPTRWNSTFRMLATALKFKTAFDAYKEREPHYDYTPSSEDWSKVEKVCKL 418
           +   K++ +D  T+WN+T+ ML  A + K  F      +P Y   PS+EDW  VE +C  
Sbjct: 385 VPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTF 444

Query: 419 LEVFDLATHVISGSEYPTSNLYLAEVWRVK 448
           L+    A   +  +  P++  +  EVW+ +
Sbjct: 445 LKPLFEAVSTLQSTGNPSAVTFFHEVWKTQ 474


>AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr1:6385614-6388005 FORWARD LENGTH=690
          Length = 690

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/332 (21%), Positives = 147/332 (44%), Gaps = 31/332 (9%)

Query: 75  CKYCKQKFATSGVGASTSHLRRH------------GEVCTQKSLQKASEKKQSVIPFQPS 122
           CK+C Q ++   +  +T +L RH             +V T  S+ +       V P Q  
Sbjct: 72  CKFCGQSYS---IATATGNLGRHLTNRHPGYDKAAADVVTSSSVPQT--PPAVVKPSQSQ 126

Query: 123 NGNPFIISGARYNNEKMREIIASAIMVHEMPFNVVEDEVWMW-AFQYANSDFTKVTRKTI 181
           +  P      + + + +  ++   + +  +P + V DE W+  +F++          +  
Sbjct: 127 SKVP------QLDYDHLNWLVLKWLALSSLPPSTV-DETWLGNSFKFLKPSIQLWPAEKY 179

Query: 182 RKDCLALYEAEKKILKTMLNSV-NKISLTTDMWKSSHKVTEYMVLTGHFIDVGWKLQKRV 240
           +     ++ + +  +KT L  + +K+S+T   W S   +  YM +TG +ID  W   + +
Sbjct: 180 KAILDEVFTSMRGDVKTTLEHIQSKVSVTLSFWNSYENIF-YMSVTGQWIDENWSSHRLL 238

Query: 241 LSFVKVPAPRRGVDVADAIFKCLKVWGLENKVFSVSVDNAAYNDTCLKNLKDTLSLSSKL 300
           L   ++P P  G ++ +++ K LK + +E+++   + DN+        +LK+       L
Sbjct: 239 LDICRIPYPSGGSEIYNSLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL 298

Query: 301 FLNGALFHVRCCAHILNLLVQDGLGKIKSIIFNVRESVKYINYNDARLKNFCDVVEQKRL 360
                  ++ C A  LN ++ +GL  IK II  VRE  + +N +     +F  +    + 
Sbjct: 299 ----PFCYIPCAAQTLNDIIDEGLATIKPIISKVREFTQELNASTELSDDFIQLTTAYQE 354

Query: 361 KERKLIMDCPTRWNSTFRMLATALKFKTAFDA 392
              KL +D  +RW+  ++M+    K   + D+
Sbjct: 355 GNWKLPIDASSRWSGNYQMVNILCKASKSLDS 386