Miyakogusa Predicted Gene

Lj3g3v0708190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0708190.1 Non Chatacterized Hit- tr|I1J6K8|I1J6K8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,72.99,0,BIOTINYL_LIPOYL,Biotin/lipoyl attachment; no
description,NULL; no description,E3 binding; seg,NULL;
,NODE_48235_length_1348_cov_137.943619.path2.1
         (266 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25860.1 | Symbols: LTA2, PLE2 | 2-oxoacid dehydrogenases acy...   193   8e-50
AT1G34430.1 | Symbols: EMB3003 | 2-oxoacid dehydrogenases acyltr...   132   2e-31
AT3G13930.1 | Symbols:  | Dihydrolipoamide acetyltransferase, lo...    73   3e-13
AT1G54220.2 | Symbols:  | Dihydrolipoamide acetyltransferase, lo...    67   1e-11
AT1G54220.1 | Symbols:  | Dihydrolipoamide acetyltransferase, lo...    67   1e-11
AT3G52200.2 | Symbols: LTA3 | Dihydrolipoamide acetyltransferase...    62   3e-10
AT3G52200.1 | Symbols: LTA3 | Dihydrolipoamide acetyltransferase...    62   5e-10

>AT3G25860.1 | Symbols: LTA2, PLE2 | 2-oxoacid dehydrogenases
           acyltransferase family protein | chr3:9460632-9462585
           FORWARD LENGTH=480
          Length = 480

 Score =  193 bits (491), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 111/187 (59%), Positives = 121/187 (64%), Gaps = 10/187 (5%)

Query: 39  PSKPRRRPSQSVQSKIREIFMPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADM 98
           P+   RR S +V+SKIREIFMPALSSTMTEGKIV W+K  G  L+KG+SVVVVESDKADM
Sbjct: 41  PATSHRR-SMTVRSKIREIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADM 99

Query: 99  DVETFYDGILAAIVVNEGQTAPVGAPIGLL---------AETXXXXXXXXXXXXXXXXXX 149
           DVETFYDG LAAIVV EG+TAPVGA IGLL         A++                  
Sbjct: 100 DVETFYDGYLAAIVVGEGETAPVGAAIGLLAETEAEIEEAKSKAASKSSSSVAEAVVPSP 159

Query: 150 XXXXXXXXXXXXXXXXXXXXXDGPRKTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPAD 209
                                DGPRKTVATPYAKKLAKQHKVDI SV GTGP GRIT +D
Sbjct: 160 PPVTSSPAPAIAQPAPVTAVSDGPRKTVATPYAKKLAKQHKVDIESVAGTGPFGRITASD 219

Query: 210 VEAAAGI 216
           VE AAGI
Sbjct: 220 VETAAGI 226


>AT1G34430.1 | Symbols: EMB3003 | 2-oxoacid dehydrogenases
           acyltransferase family protein | chr1:12588027-12590084
           REVERSE LENGTH=465
          Length = 465

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 75/91 (82%), Gaps = 3/91 (3%)

Query: 41  KPRRRPSQSVQSKIREIFMPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDV 100
           KPR  P   +Q+KIREIFMPALSSTMTEGKIV WVK  G  L+KG+SVVVVESDKADMDV
Sbjct: 29  KPRIIP---IQAKIREIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDV 85

Query: 101 ETFYDGILAAIVVNEGQTAPVGAPIGLLAET 131
           ETFYDG LAAI+V EG  APVG+ I LLAET
Sbjct: 86  ETFYDGYLAAIMVEEGGVAPVGSAIALLAET 116



 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 34/44 (77%)

Query: 171 DGPRKTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEAAA 214
           +G ++ VA+PYAKKLAK+ KV++  +VG+GP GRI   DVEA A
Sbjct: 178 EGGKRIVASPYAKKLAKELKVELAGLVGSGPMGRIVAKDVEAVA 221


>AT3G13930.1 | Symbols:  | Dihydrolipoamide acetyltransferase, long
           form protein | chr3:4596240-4600143 FORWARD LENGTH=539
          Length = 539

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 55  REIFMPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVN 114
           +EI MP+LS TMTEG I  W+K  G  ++ G+ +  VE+DKA +++E   +G LA IV  
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFLAKIVKE 171

Query: 115 EG-QTAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGP 173
           EG +   VG  I +  E                                          P
Sbjct: 172 EGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAKPAPSLPKEEKVEKPASAP 231

Query: 174 R-------------KTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVE 211
                         +  A+P A+KLA+ + V + S+ GTGP GRI  ADVE
Sbjct: 232 EAKISKPSSAPSEDRIFASPLARKLAEDNNVPLSSIKGTGPEGRIVKADVE 282


>AT1G54220.2 | Symbols:  | Dihydrolipoamide acetyltransferase, long
           form protein | chr1:20246460-20250208 REVERSE LENGTH=539
          Length = 539

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 14/171 (8%)

Query: 55  REIFMPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVN 114
           +EI MP+LS TMTEG I  W+K  G  ++ G+ +  VE+DKA +++E   +G LA IV  
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKA 171

Query: 115 EG-QTAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGP 173
           EG +   VG  I +  E                                          P
Sbjct: 172 EGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEEKVKQPSSPP 231

Query: 174 R-------------KTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVE 211
                         +  A+P A+KLA+ + V +  + GTGP GRI  AD++
Sbjct: 232 EPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADID 282


>AT1G54220.1 | Symbols:  | Dihydrolipoamide acetyltransferase, long
           form protein | chr1:20246460-20250208 REVERSE LENGTH=539
          Length = 539

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 14/171 (8%)

Query: 55  REIFMPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVN 114
           +EI MP+LS TMTEG I  W+K  G  ++ G+ +  VE+DKA +++E   +G LA IV  
Sbjct: 112 QEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYLAKIVKA 171

Query: 115 EG-QTAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGP 173
           EG +   VG  I +  E                                          P
Sbjct: 172 EGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTKAEPTPAPPKEEKVKQPSSPP 231

Query: 174 R-------------KTVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVE 211
                         +  A+P A+KLA+ + V +  + GTGP GRI  AD++
Sbjct: 232 EPKASKPSTPPTGDRVFASPLARKLAEDNNVPLSDIEGTGPEGRIVKADID 282


>AT3G52200.2 | Symbols: LTA3 | Dihydrolipoamide acetyltransferase,
           long form protein | chr3:19360317-19366091 FORWARD
           LENGTH=713
          Length = 713

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 17/161 (10%)

Query: 59  MPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
           MPALS TM +G I  W K  G  +  GD +  +E+DKA ++ E+  +G LA I++ EG +
Sbjct: 293 MPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSK 352

Query: 118 TAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRK-- 175
              VG PI L+ E                                        D P +  
Sbjct: 353 DVAVGKPIALIVED-----------AESIEAIKSSSAGSSEVDTVKEVPDSVVDKPTERK 401

Query: 176 ---TVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEAA 213
              T  +P AK L  +H ++  S+  +GP G +  +DV AA
Sbjct: 402 AGFTKISPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAA 442



 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 59  MPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
           MPALS TM+ G +V W+K  G  +  GD +  +E+DKA ++ E+  +G LA I+V EG +
Sbjct: 166 MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSK 225

Query: 118 TAPVGAPIGLLAE 130
             PV  PI ++ E
Sbjct: 226 DIPVNEPIAIMVE 238


>AT3G52200.1 | Symbols: LTA3 | Dihydrolipoamide acetyltransferase,
           long form protein | chr3:19360317-19366091 FORWARD
           LENGTH=637
          Length = 637

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 17/161 (10%)

Query: 59  MPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
           MPALS TM +G I  W K  G  +  GD +  +E+DKA ++ E+  +G LA I++ EG +
Sbjct: 217 MPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYLAKILIPEGSK 276

Query: 118 TAPVGAPIGLLAETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRK-- 175
              VG PI L+ E                                        D P +  
Sbjct: 277 DVAVGKPIALIVED-----------AESIEAIKSSSAGSSEVDTVKEVPDSVVDKPTERK 325

Query: 176 ---TVATPYAKKLAKQHKVDIGSVVGTGPNGRITPADVEAA 213
              T  +P AK L  +H ++  S+  +GP G +  +DV AA
Sbjct: 326 AGFTKISPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAA 366



 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 59  MPALSSTMTEGKIVPWVKPGGAVLSKGDSVVVVESDKADMDVETFYDGILAAIVVNEG-Q 117
           MPALS TM+ G +V W+K  G  +  GD +  +E+DKA ++ E+  +G LA I+V EG +
Sbjct: 90  MPALSPTMSHGNVVKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSK 149

Query: 118 TAPVGAPIGLLAE 130
             PV  PI ++ E
Sbjct: 150 DIPVNEPIAIMVE 162