Miyakogusa Predicted Gene

Lj3g3v0669220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0669220.1 Non Chatacterized Hit- tr|I3SIK9|I3SIK9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.29,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Root_cap,Root cap,CUFF.41098.1
         (340 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   424   e-119
AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   399   e-111
AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   399   e-111
AT5G60530.1 | Symbols:  | late embryogenesis abundant protein-re...   310   1e-84
AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   291   3e-79
AT3G19430.1 | Symbols:  | late embryogenesis abundant protein-re...   245   3e-65

>AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:22075334-22076567 FORWARD
           LENGTH=337
          Length = 337

 Score =  424 bits (1091), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 200/342 (58%), Positives = 252/342 (73%), Gaps = 7/342 (2%)

Query: 1   MGVSRSIGLS-TFVLLFAFFMMHVDAFYSDTQTCTNRKSRCFLKKIQCPHECPLKSPSNP 59
           M +S+++ L  + V    F        Y     C+N  +RC+ K I+CP ECP K+  N 
Sbjct: 1   MEISKTLLLVISLVAATCFLQAKAAGVY-----CSNPYTRCYRKYIRCPEECPSKTAMNS 55

Query: 60  KDKVCYLDCDSPMCKASCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSD 119
           K+KVCY DCD P CK+ C+ RKPNCN  GSAC DPRF+G DGIVFYFHG+ +E FSLVSD
Sbjct: 56  KNKVCYADCDRPTCKSQCRMRKPNCNRPGSACYDPRFIGGDGIVFYFHGKSNEEFSLVSD 115

Query: 120 VNLQINARFIGLRPAGRPRDYTWIQALGILFDSHKFSVEATPSGIWDDEIDRLKISYDGS 179
            +LQIN RFIG RPAGR RD+TWIQALG LF+S+KFS+EA  +  WD+EID LK SYDG 
Sbjct: 116 SDLQINGRFIGHRPAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQ 175

Query: 180 ELDIPEGHLSTWQDRENQLRVERISSKNSVIVTIPEIAEISVNVVPVTKEDSRIHNYQIP 239
           +L +PE  LSTW      +++ER+S +NSVIVTI + AEI +NVVPVTKED RIH+Y++P
Sbjct: 176 DLSVPEETLSTWYSPNKDIKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVP 235

Query: 240 DDDCFAHLEVQFNFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLTSA 299
            DDCFAHLEVQF F+ LS KV+G+LGRTY+PDFQNPAKPGVAMPVVGGED ++T+SL S 
Sbjct: 236 SDDCFAHLEVQFRFFNLSPKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSN 295

Query: 300 DCRVCMFLPAEAS-EKADSVMEYGMLDCTGSSNSRNGIVCKR 340
           DC+ C+F  ++A  +   S +EY  LDCT  ++S  GIVC++
Sbjct: 296 DCKTCIFSESQAEIDSVKSEIEYATLDCTRGASSGYGIVCRK 337


>AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr1:20463107-20464407 FORWARD
           LENGTH=347
          Length = 347

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/335 (57%), Positives = 246/335 (73%), Gaps = 9/335 (2%)

Query: 13  VLLFAFFMMHVDAFYSDTQTCTNRKSRCFLKKIQCPHECPLKSPSNPKDKVCYLDCDSPM 72
           V+L+A  ++       +T+TC  RKS CFLKK  CP +CP  SP N   K C +DC +P+
Sbjct: 15  VMLYACIVVVQLEAALETKTCFQRKSPCFLKKQTCPKQCPSFSPPNGSTKACVIDCFNPI 74

Query: 73  CKASCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLR 132
           CKA+C++RKPNCNG+GSACLDPRF+G DGIVFYFHG+RDEHF+L+SDV+ Q+NARFIGLR
Sbjct: 75  CKATCRNRKPNCNGKGSACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGLR 134

Query: 133 PAGRPRDYTWIQALGILF--DSHKFSVEATPSGIWDDEIDRLKISYDGSELDIPEGHLST 190
           P GR RD+TWIQ+LG++F  +S  FS+EAT +  WD ++D L++SY+G E+ +P+G  S 
Sbjct: 135 PNGRARDFTWIQSLGLIFGPNSKTFSLEATKAEKWDHQVDHLRLSYEGKEISLPKGDTSV 194

Query: 191 WQ-DRENQLRVERISSKNSVIVTIPEIAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEV 249
           W     + +++ER S  NSV+VT+ +IAEI +NVVPVTKED  IH Y IP+DDCFAHLEV
Sbjct: 195 WSPPLGDYIKIERTSDINSVLVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLEV 254

Query: 250 QFNFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCRVCMFLPA 309
           QF F  LSS VEGVLGRTY+ DF+NPAKPGVAMPVVGGEDKYRT SL    C  C++  +
Sbjct: 255 QFRFLKLSSNVEGVLGRTYKEDFKNPAKPGVAMPVVGGEDKYRTASLLETSCNACVY--S 312

Query: 310 EASEKADSV----MEYGMLDCTGSSNSRNGIVCKR 340
             S   D +    +    +DCTG S+S  GI C++
Sbjct: 313 GGSRSLDKIEPLLLNQNTVDCTGGSSSGVGIFCRK 347


>AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr4:13705341-13706637 FORWARD
           LENGTH=341
          Length = 341

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/342 (55%), Positives = 242/342 (70%), Gaps = 3/342 (0%)

Query: 1   MGVSRSIGLSTFVLLFAFFMMHVDAFYSDTQTCTNRKSRCFLKKIQCPHECPLKSPSNPK 60
           M V +S  L   + + A   +HV A++  T    N   RC L+ I CP ECP +   N +
Sbjct: 1   MEVPKS-SLLMIIFVVASCFLHVKAWHGQTYCGGNATPRCQLRYIDCPEECPTEMFPNSQ 59

Query: 61  DKVCYLDCDSPMCKASCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDV 120
           +K+C++DC  P+C+A C++ KPNC   GS CLDPRF+G DGIVFYFHG+ +EHFS+VSD 
Sbjct: 60  NKICWVDCFKPLCEAVCRAVKPNCESYGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDP 119

Query: 121 NLQINARFIGLRPAGRPRDYTWIQALGILFDSHKFSVEATPSGIWDDEIDRLKISYDGSE 180
           + QINARF G RPAGR RD+TWIQALG LF+SHKFS+E T    WD  +D LK + DG +
Sbjct: 120 DFQINARFTGHRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQD 179

Query: 181 LDIPEGHLSTWQDRENQLRVERISSKNSVIVTIPEIAEISVNVVPVTKEDSRIHNYQIPD 240
           L IP+  LSTW   +  +++ER++ KNSVIVTI + AEI VNVVPVTKED RIHNY++P 
Sbjct: 180 LIIPQETLSTWYSSDKDIKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPV 239

Query: 241 DDCFAHLEVQFNFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLTSAD 300
           DDCFAH EVQF F  LS KV+G+LGRTY+PDF+NPAKPGV MPVVGGED +RT+SL S  
Sbjct: 240 DDCFAHFEVQFKFINLSPKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHV 299

Query: 301 CRVCMFL--PAEASEKADSVMEYGMLDCTGSSNSRNGIVCKR 340
           C+ C+F   PA AS        Y +LDC+  ++S  G+VC++
Sbjct: 300 CKTCLFSEDPAVASGSVKPKSTYALLDCSRGASSGYGLVCRK 341


>AT5G60530.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr5:24334197-24335685 REVERSE LENGTH=439
          Length = 439

 Score =  310 bits (793), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 195/288 (67%), Gaps = 6/288 (2%)

Query: 33  CTNRKSRCFLKKIQCPHECPLKSPSNPKD-KVCYLDCDSPMCKASCKSRKPNCNGRGSAC 91
           C  R S C+ K + CP ECP + P+  K+ K C++DC +  C+A+CK RK NCNG GS C
Sbjct: 153 CQGRGS-CYYKTLVCPGECPKRKPTKNKNTKGCFIDCTN-KCEATCKWRKTNCNGYGSLC 210

Query: 92  LDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPAGRPRDYTWIQALGILFD 151
            DPRFVG DG++FYFHG +  +F++VSD NLQINA FIG RP GR RD+TW+QAL ++F+
Sbjct: 211 YDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVGRTRDFTWVQALNVMFE 270

Query: 152 SHKFSVEATPSGIWDDEIDRLKISYDGSELDIPEGHLSTWQDRENQLR---VERISSKNS 208
           +HK  + A     WD+  D   I YDG  + +PE   S W++   Q +   +ER   +NS
Sbjct: 271 NHKLVITANRVNQWDETSDAFTIRYDGELITLPEDEQSEWREISGQKKDIIIERTDERNS 330

Query: 209 VIVTIPEIAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFNFYGLSSKVEGVLGRTY 268
           V V + ++ ++ + V P+ KE++R+HNYQ+P DD FAHLE QF F  LS  VEGVLG+TY
Sbjct: 331 VRVLVSDLVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQFKFLDLSELVEGVLGKTY 390

Query: 269 QPDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCRVCMFLPAEASEKAD 316
           +PD+ + AK GV MPV+GGEDKY+T SL S  CR+C F P E S  AD
Sbjct: 391 RPDYVSSAKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEESLSAD 438


>AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:24331787-24332947 REVERSE
           LENGTH=338
          Length = 338

 Score =  291 bits (746), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/277 (50%), Positives = 186/277 (67%), Gaps = 5/277 (1%)

Query: 33  CTNRKSRCFLKKIQCPHECPLKSPSNPKDK-VCYLDCDSPMCKASCKSRKPNCNGRGSAC 91
           C  R S C  K + CP ECP + P   K K  C++DC S  C+ +CK RK NCNG GS C
Sbjct: 53  CLARGS-CNQKILTCPKECPERKPKMNKKKKACFIDCSSK-CEVTCKWRKANCNGYGSLC 110

Query: 92  LDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPAGRPRDYTWIQALGILFD 151
            DPRFVG DG++FYFHG +D +F++VSD NLQINA FIG RPAGR RD+TW+QA  ++FD
Sbjct: 111 YDPRFVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFD 170

Query: 152 SHKFSVEATPSGIWDDEIDRLKISYDGSELDIPEGHLSTWQD--RENQLRVERISSKNSV 209
           SH   + A     WDD +D L + ++G E+++P    + W+    E ++ VER   +N+V
Sbjct: 171 SHNLVIAAKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEWRIDLDEREVIVERTDERNNV 230

Query: 210 IVTIPEIAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFNFYGLSSKVEGVLGRTYQ 269
            VT+  I +I + V P+ KE+ R+H YQ+P DD FAHLE QF F+ LS  VEGVLG+TY+
Sbjct: 231 RVTVSGIVQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDLVEGVLGKTYR 290

Query: 270 PDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCRVCMF 306
           P + +P K GV MP++GGEDKY+T SL S  C VC F
Sbjct: 291 PGYVSPVKTGVPMPMMGGEDKYQTPSLFSPLCNVCRF 327


>AT3G19430.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr3:6736382-6738330 REVERSE LENGTH=559
          Length = 559

 Score =  245 bits (625), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 187/312 (59%), Gaps = 21/312 (6%)

Query: 33  CTNRKSRCFLKKIQCPHECPLKSPSNPKDKVCYLDCDSPMCKASCKSRKPNCNGRGSACL 92
           C  ++S C+  +  CP +CP         + C +DC +  CK  C     NC+  GS C 
Sbjct: 265 CKKQRSPCYGVEYTCPADCP---------RSCQVDCVT--CKPVC-----NCDKPGSVCQ 308

Query: 93  DPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPAGRPRDYTWIQALGILFDS 152
           DPRF+G DG+ FYFHG++D +F L+SD NL INA FIG R AG  RD+TW+Q++ ILF +
Sbjct: 309 DPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRAGMARDFTWVQSIAILFGT 368

Query: 153 HKFSVEATPSGIWDDEIDRLKISYDGSELDIPEGHLSTWQDREN---QLRVERISS-KNS 208
           H+  V A  +  WDD +DR+ +S+DG+ + +P+   + W        ++ V+R+++  N+
Sbjct: 369 HRLYVGALKTATWDDSVDRIAVSFDGNVISLPQLDGARWTSSPGVYPEVSVKRVNTDTNN 428

Query: 209 VIVTIPEIAEISVNVVPVTKEDSRIHNYQIPDDDCFAHLEVQFNFYGLSSKVEGVLGRTY 268
           + V +  + +I+  VVP+T EDSRIH Y + +DDC AHL++ F F  LS  V+GVLG+TY
Sbjct: 429 LEVEVEGLLKITARVVPITMEDSRIHGYDVKEDDCLAHLDLGFKFQDLSDNVDGVLGQTY 488

Query: 269 QPDFQNPAKPGVAMPVVGGEDKYRTTSLTSADCRVCMFLPAEASEKADSVMEYGMLDCTG 328
           + ++ +  K GV MPV+GG+ +++TT L + DC    F     S    S +E   + C  
Sbjct: 489 RSNYVSRVKIGVHMPVMGGDREFQTTGLFAPDCSAARFTGNGDSNNGRSKLELPEMSCAS 548

Query: 329 SSNSRNGIVCKR 340
               + G+VCKR
Sbjct: 549 GLGGK-GVVCKR 559