Miyakogusa Predicted Gene

Lj3g3v0669210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0669210.1 Non Chatacterized Hit- tr|I3SZI7|I3SZI7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,88.64,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.41099.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   208   2e-54
AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   197   3e-51
AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   187   4e-48
AT5G60530.1 | Symbols:  | late embryogenesis abundant protein-re...   156   6e-39
AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA) prot...   154   3e-38
AT3G19430.1 | Symbols:  | late embryogenesis abundant protein-re...   129   7e-31

>AT1G54890.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr1:20463107-20464407 FORWARD
           LENGTH=347
          Length = 347

 Score =  208 bits (529), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 93/146 (63%), Positives = 118/146 (80%), Gaps = 2/146 (1%)

Query: 33  DTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRG 92
           +T+TC  RKS CFLKK  CP +CP  SP N   K C +DC +P+CKA+C++ KPNCNG+G
Sbjct: 31  ETKTCFQRKSPCFLKKQTCPKQCPSFSPPNGSTKACVIDCFNPICKATCRNRKPNCNGKG 90

Query: 93  SACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGI 152
           SACLDPRF+G DGIVFYFHG+RDEHF+L+SDV+ Q+NARFIGLRP+GR RD+TWIQ+LG+
Sbjct: 91  SACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGLRPNGRARDFTWIQSLGL 150

Query: 153 LF--DSHKFSVEATPSGIWDDEVDRL 176
           +F  +S  FS+EAT +  WD +VD L
Sbjct: 151 IFGPNSKTFSLEATKAEKWDHQVDHL 176


>AT5G54370.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:22075334-22076567 FORWARD
           LENGTH=337
          Length = 337

 Score =  197 bits (501), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 88/140 (62%), Positives = 107/140 (76%)

Query: 37  CTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSACL 96
           C+N  ++C+ K I CP ECP K+  N K KVCY DCD P CK+ C+  KPNCN  GSAC 
Sbjct: 29  CSNPYTRCYRKYIRCPEECPSKTAMNSKNKVCYADCDRPTCKSQCRMRKPNCNRPGSACY 88

Query: 97  DPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDS 156
           DPRF+G DGIVFYFHG+ +E FSLVSD +LQIN RFIG RP+GR RD+TWIQALG LF+S
Sbjct: 89  DPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHRPAGRARDFTWIQALGFLFNS 148

Query: 157 HKFSVEATPSGIWDDEVDRL 176
           +KFS+EA  +  WD+E+D L
Sbjct: 149 NKFSLEAAKTASWDNEIDHL 168


>AT4G27400.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr4:13705341-13706637 FORWARD
           LENGTH=341
          Length = 341

 Score =  187 bits (474), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 109/156 (69%), Gaps = 4/156 (2%)

Query: 21  MHVDAFYGVYYSDTQTCTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKAS 80
           +HV A++G  Y       N   +C L+ I CP ECP +   N + K+C+VDC  P+C+A 
Sbjct: 20  LHVKAWHGQTYCGG----NATPRCQLRYIDCPEECPTEMFPNSQNKICWVDCFKPLCEAV 75

Query: 81  CKSPKPNCNGRGSACLDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGR 140
           C++ KPNC   GS CLDPRF+G DGIVFYFHG+ +EHFS+VSD + QINARF G RP+GR
Sbjct: 76  CRAVKPNCESYGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINARFTGHRPAGR 135

Query: 141 PRDYTWIQALGILFDSHKFSVEATPSGIWDDEVDRL 176
            RD+TWIQALG LF+SHKFS+E T    WD  +D L
Sbjct: 136 TRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHL 171


>AT5G60530.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr5:24334197-24335685 REVERSE LENGTH=439
          Length = 439

 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 72/139 (51%), Positives = 95/139 (68%), Gaps = 3/139 (2%)

Query: 37  CTNRKSQCFLKKIPCPHECPLKSPS-NPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSAC 95
           C  R S C+ K + CP ECP + P+ N   K C++DC +  C+A+CK  K NCNG GS C
Sbjct: 153 CQGRGS-CYYKTLVCPGECPKRKPTKNKNTKGCFIDC-TNKCEATCKWRKTNCNGYGSLC 210

Query: 96  LDPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFD 155
            DPRFVG DG++FYFHG +  +F++VSD NLQINA FIG RP GR RD+TW+QAL ++F+
Sbjct: 211 YDPRFVGGDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVGRTRDFTWVQALNVMFE 270

Query: 156 SHKFSVEATPSGIWDDEVD 174
           +HK  + A     WD+  D
Sbjct: 271 NHKLVITANRVNQWDETSD 289


>AT5G60520.1 | Symbols:  | Late embryogenesis abundant (LEA)
           protein-related | chr5:24331787-24332947 REVERSE
           LENGTH=338
          Length = 338

 Score =  154 bits (390), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 92/137 (67%), Gaps = 2/137 (1%)

Query: 41  KSQCFLKKIPCPHECPLKSPSNPKAK-VCYVDCDSPMCKASCKSPKPNCNGRGSACLDPR 99
           +  C  K + CP ECP + P   K K  C++DC S  C+ +CK  K NCNG GS C DPR
Sbjct: 56  RGSCNQKILTCPKECPERKPKMNKKKKACFIDCSSK-CEVTCKWRKANCNGYGSLCYDPR 114

Query: 100 FVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDSHKF 159
           FVG DG++FYFHG +D +F++VSD NLQINA FIG RP+GR RD+TW+QA  ++FDSH  
Sbjct: 115 FVGGDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDSHNL 174

Query: 160 SVEATPSGIWDDEVDRL 176
            + A     WDD VD L
Sbjct: 175 VIAAKKVASWDDSVDSL 191


>AT3G19430.1 | Symbols:  | late embryogenesis abundant
           protein-related / LEA protein-related |
           chr3:6736382-6738330 REVERSE LENGTH=559
          Length = 559

 Score =  129 bits (325), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 86/140 (61%), Gaps = 16/140 (11%)

Query: 37  CTNRKSQCFLKKIPCPHECPLKSPSNPKAKVCYVDCDSPMCKASCKSPKPNCNGRGSACL 96
           C  ++S C+  +  CP +CP         + C VDC +  CK  C     NC+  GS C 
Sbjct: 265 CKKQRSPCYGVEYTCPADCP---------RSCQVDCVT--CKPVC-----NCDKPGSVCQ 308

Query: 97  DPRFVGADGIVFYFHGRRDEHFSLVSDVNLQINARFIGLRPSGRPRDYTWIQALGILFDS 156
           DPRF+G DG+ FYFHG++D +F L+SD NL INA FIG R +G  RD+TW+Q++ ILF +
Sbjct: 309 DPRFIGGDGLTFYFHGKKDSNFCLISDPNLHINAHFIGKRRAGMARDFTWVQSIAILFGT 368

Query: 157 HKFSVEATPSGIWDDEVDRL 176
           H+  V A  +  WDD VDR+
Sbjct: 369 HRLYVGALKTATWDDSVDRI 388