Miyakogusa Predicted Gene

Lj3g3v0663830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0663830.1 Non Chatacterized Hit- tr|I3S0C4|I3S0C4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; DUF1218,Protein of
unknown function DUF12,CUFF.42782.1
         (186 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) ...   248   2e-66
AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) ...   239   8e-64
AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) ...   237   4e-63
AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) ...   184   4e-47
AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) ...   137   6e-33
AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) ...    99   1e-21
AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) ...    64   8e-11
AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) ...    59   2e-09

>AT4G27435.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr4:13723903-13724872 FORWARD LENGTH=173
          Length = 173

 Score =  248 bits (632), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 122/174 (70%), Positives = 141/174 (81%), Gaps = 2/174 (1%)

Query: 1   MASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFL 60
           MASK+V  IVFVF+LIAFGLAVAAEQRRSTA++V D+E  YNYCVY+SD ATGYGVGAFL
Sbjct: 1   MASKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFL 60

Query: 61  FLMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFVIAEVCLLAGSVENAYHT 120
           F + SQILIM+ SRCFCCGKPLKPGGSRA A+ILFI+ W+FF+IAE+CLLAGSVENAYHT
Sbjct: 61  FSVASQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHT 120

Query: 121 KYRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARE-SFQPY 173
           KYRT+F+ DNPP C+T+RK             AI+S+FYY  Y SA E S  PY
Sbjct: 121 KYRTMFM-DNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLSPY 173


>AT1G52910.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:19708114-19709128 FORWARD LENGTH=175
          Length = 175

 Score =  239 bits (610), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 110/171 (64%), Positives = 134/171 (78%)

Query: 1   MASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFL 60
           MASKLV+IIVF+ DLIA GLA+AAEQRRS  K+V D E  + +C Y SDIAT YG GAF+
Sbjct: 1   MASKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFV 60

Query: 61  FLMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFVIAEVCLLAGSVENAYHT 120
            L +SQ++IMVASRCFCCGK LKPGGSRAC ++LF+ICWVFF+IAEVCLLAGS+ NAYHT
Sbjct: 61  LLFISQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHT 120

Query: 121 KYRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARESFQ 171
            YR ++  +NPPSCE +RK            TAI+S+FYYI+YS AR+ +Q
Sbjct: 121 TYRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDGYQ 171


>AT3G15480.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr3:5226489-5227666 REVERSE LENGTH=175
          Length = 175

 Score =  237 bits (604), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 108/171 (63%), Positives = 134/171 (78%)

Query: 1   MASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFL 60
           MASKLV+IIVF+ DLIA GLA+AAEQRRS  K+  D +  Y+YCVY +DIAT YG GAF+
Sbjct: 1   MASKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFV 60

Query: 61  FLMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFVIAEVCLLAGSVENAYHT 120
            L VSQ+LIM ASRCFCCGK L PGGSRACA+ILF+ICWVFF+IAE+CLLA S+ NAYHT
Sbjct: 61  LLFVSQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHT 120

Query: 121 KYRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARESFQ 171
           +YR ++  ++PPSCE +RK            TAI+S+FYY+ YS AR+++Q
Sbjct: 121 QYRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARDAYQ 171


>AT1G61065.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:22490430-22491330 REVERSE LENGTH=180
          Length = 180

 Score =  184 bits (466), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 103/172 (59%), Positives = 126/172 (73%), Gaps = 3/172 (1%)

Query: 1   MASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFL 60
           MAS L+L++VFVFDLIAFGLAVAAEQRR+T +I  +S  + +YCVY+ DIATG GVG+FL
Sbjct: 1   MASVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESR-DLSYCVYDKDIATGLGVGSFL 59

Query: 61  FLMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFVIAEVCLLAGSVENAYHT 120
            L+ SQ+LIMVASRC CCG+ L P GSR+ A+ LFI  WVFF IA+VCLLAGSV NAYHT
Sbjct: 60  VLLASQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHT 119

Query: 121 KYRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARESFQP 172
           KYR  F  +  PSC ++RK            T I+SE YY+  S A++ FQP
Sbjct: 120 KYRVYF-GNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKD-FQP 169


>AT1G13380.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:4589218-4590362 REVERSE LENGTH=188
          Length = 188

 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 114/186 (61%), Gaps = 6/186 (3%)

Query: 2   ASKLVLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFLF 61
           AS LV I+V    L+AFG ++AAE+RRS  K + D   N  +CVY+SD+ATGYGVGAFLF
Sbjct: 6   ASTLVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLF 65

Query: 62  LMVSQILIMVASRCFCCGKPLKPGGSRACAVILFIICWVFFVIAEVCLLAGSVENAYHTK 121
           L+ S+ L+M  ++C C G+PL PG  RA ++I FI  W+ F++AE C++AG+ +NAYHTK
Sbjct: 66  LLSSESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTK 125

Query: 122 YRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARESFQPYLGGE--TG 179
           Y    +     SC ++RK            T +++ +YY+ ++ +  S   +      + 
Sbjct: 126 Y----LSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPPAHKANRSSSN 181

Query: 180 VGMGAY 185
           +GM  Y
Sbjct: 182 IGMAGY 187


>AT1G68220.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr1:25570322-25571562 FORWARD LENGTH=201
          Length = 201

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 6   VLIIVFVFDLIAFGLAVAAEQRRSTAKIVLDSEANYNYCVYNSDIATGYGVGAFLFLMVS 65
           +L +V    L+AF  A  AE+RRSTA  V D       C Y ++ +T YG+ AF  L+VS
Sbjct: 7   ILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVS 66

Query: 66  QILIMVASRCFCCGKPLKPGGS-RACAVILFIICWVFFVIAEVCLLAGSVENAYHTKYRT 124
           Q ++   ++C C GK L  G S    A++ F++ WV F+ AE CLL GS  NAYHTK   
Sbjct: 67  QAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEG 126

Query: 125 LFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSA 166
           ++ K    SC  +              + I +  YY+ +S A
Sbjct: 127 IY-KGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKA 167


>AT5G17210.1 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656519-5657970 FORWARD LENGTH=209
          Length = 209

 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 5/177 (2%)

Query: 9   IVFVFDLIAFGLAVAAEQRR-STAKIVLDSEANYNYCVYNSDIATGYGVGAFLFLMVSQI 67
           ++F+  L++   A  AE  R   +++ +    +   C Y    A   G  + LFLM++QI
Sbjct: 11  VLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFTSALFLMMAQI 70

Query: 68  LIMVASRCFCCGKPLKPGGSR-ACAVILFIICWVFFVIAEVCLLAGSVENAYHTKYRTLF 126
           ++ V+S CFCC K   P  S    ++I F++ W  FVIA + LL+G+  N  HT+     
Sbjct: 71  IVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEES--- 127

Query: 127 VKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYINYSSARESFQPYLGGETGVGMG 183
           +      C  V+             T  +   YY+  +S ++         TG+ MG
Sbjct: 128 MNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAATTTQGTGIAMG 184


>AT5G17210.2 | Symbols:  | Protein of unknown function (DUF1218) |
           chr5:5656700-5657970 FORWARD LENGTH=175
          Length = 175

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 4/141 (2%)

Query: 44  CVYNSDIATGYGVGAFLFLMVSQILIMVASRCFCCGKPLKPGGSR-ACAVILFIICWVFF 102
           C Y    A   G  + LFLM++QI++ V+S CFCC K   P  S    ++I F++ W  F
Sbjct: 13  CTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTF 72

Query: 103 VIAEVCLLAGSVENAYHTKYRTLFVKDNPPSCETVRKXXXXXXXXXXXXTAIISEFYYIN 162
           VIA + LL+G+  N  HT+     +      C  V+             T  +   YY+ 
Sbjct: 73  VIAFLVLLSGAALNDEHTEES---MNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLC 129

Query: 163 YSSARESFQPYLGGETGVGMG 183
            +S ++         TG+ MG
Sbjct: 130 LTSNKQIVAATTTQGTGIAMG 150