Miyakogusa Predicted Gene

Lj3g3v0662800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0662800.1 Non Chatacterized Hit- tr|I1M3B4|I1M3B4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41099 PE,83.33,4e-16,
,79454_g.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54200.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   257   5e-69
AT3G15470.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   236   8e-63
AT5G02430.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   105   3e-23
AT5G24320.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   100   9e-22
AT5G24320.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   100   1e-21
AT1G64610.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...    98   4e-21
AT1G64610.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    98   4e-21
AT5G53500.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    97   9e-21
AT2G37670.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    94   8e-20
AT5G42010.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    93   2e-19
AT1G48870.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    73   2e-13

>AT5G54200.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:21993565-21997076 REVERSE LENGTH=825
          Length = 825

 Score =  257 bits (657), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 128/205 (62%), Positives = 152/205 (74%), Gaps = 10/205 (4%)

Query: 50  WLKSIKSVASSMAGHKXXXXXXXXXXXXXKGGRRSSSATDDSQDGTFHGPERLRVRQYGK 109
           WLKSIK+VASS+ G+K             +GG+R SSATDDS+D +FH PER++VRQYGK
Sbjct: 286 WLKSIKNVASSVTGYKERRSTDDRDSPSERGGQRFSSATDDSRDMSFHDPERVKVRQYGK 345

Query: 110 SCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLME 169
           SCKE+TAL+KSQEIQAH GSIWSIKFSLDG+YLASAGEDCVI +W+VVESERKGELL M+
Sbjct: 346 SCKELTALFKSQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMD 405

Query: 170 KPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVFG 229
           K ED S+N+    NGSPEP +  +SP                    +SLD ++VPE VFG
Sbjct: 406 KQEDGSINLFLLANGSPEPVS--MSP--------KRRGRTSFSRKSVSLDNVLVPEAVFG 455

Query: 230 LTEKPICSFQGHLHDVLDLSWSKSQ 254
           L+EKP+CSF GHL DVLDLSWSKSQ
Sbjct: 456 LSEKPVCSFVGHLDDVLDLSWSKSQ 480


>AT3G15470.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr3:5216630-5219868 REVERSE LENGTH=883
          Length = 883

 Score =  236 bits (603), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 124/206 (60%), Positives = 145/206 (70%), Gaps = 16/206 (7%)

Query: 50  WLKSIKSVASSMAGH-KXXXXXXXXXXXXXKGGRRSSSATDDSQDGTFHGPERLRVRQYG 108
           W KSIKSVASSM GH K             +GGRRSSSATDDSQ+ +FHGPER+RVRQYG
Sbjct: 335 WFKSIKSVASSMTGHSKERRSSDDRDTSSERGGRRSSSATDDSQESSFHGPERVRVRQYG 394

Query: 109 KSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLM 168
           KS KE+TALYK+QEIQAH GSIWSIKFSLDGKYLASAGEDC+IH+WQVVE+E+KGELLL 
Sbjct: 395 KSSKELTALYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLD 454

Query: 169 EKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVF 228
                +        NGSPEP    +SP                    +SL+ + VP+++F
Sbjct: 455 RPELLLLA-----TNGSPEPTT--MSP--------RRRGRTSISRKSLSLENIFVPDSLF 499

Query: 229 GLTEKPICSFQGHLHDVLDLSWSKSQ 254
           GL+EKP CSFQGH+ DVLDL+WSKSQ
Sbjct: 500 GLSEKPFCSFQGHVDDVLDLAWSKSQ 525


>AT5G02430.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:526592-529839 FORWARD LENGTH=905
          Length = 905

 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/197 (35%), Positives = 100/197 (50%), Gaps = 14/197 (7%)

Query: 51  LKSIKSVASSMAGHKXXXXXXXXXXXXXKGGRRSSSATDDSQDGTFHGPERLRVRQYGKS 110
           LK+IK VA SM+  K                   +S+   ++       + ++VR  GKS
Sbjct: 342 LKNIKDVAHSMSSSKVSEKEKDSTGS-------GTSSPKVAEKNNEQANQWVKVRHSGKS 394

Query: 111 CKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLLMEK 170
            K+++AL+  QEIQAH G IW++KFS D   LASAGEDC IHVW+V E E      +M  
Sbjct: 395 HKDLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECE------IMSM 448

Query: 171 PEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVFGL 230
            E     +   ++GS + ++   +  +  + +             +  D +  PE VF L
Sbjct: 449 NEGSLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIP-DYVHAPETVFSL 507

Query: 231 TEKPICSFQGHLHDVLD 247
           ++KPICSF GHL DVLD
Sbjct: 508 SDKPICSFTGHLDDVLD 524


>AT5G24320.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:8284858-8287651 REVERSE LENGTH=694
          Length = 694

 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 32/185 (17%)

Query: 82  RRSSSATDDSQDGTFHGP--ERLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDG 139
           +RS+   D+  +    G   ER++V++Y K  KE++AL+K QEIQAH G+I ++KFS DG
Sbjct: 204 KRSAGGDDNGGEVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDG 263

Query: 140 KYLASAGEDCVIHVWQVVESERKGELLLMEKPEDVSVNMLFPLNGSPE--PAA------- 190
           +YLASAGED V+ VW VVE ER  E    + P+     + F ++   E  P A       
Sbjct: 264 RYLASAGEDGVLRVWSVVEDERCEE---HDVPKIDPSCIYFEVSKLSELRPVAVEKDGIT 320

Query: 191 -ALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVFGLTEKPICSFQGHLHDVLDLS 249
            +L+SP                         +++P  +F + +KP+  F GH  D+LD+S
Sbjct: 321 GSLMSP-----------------RKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILDIS 363

Query: 250 WSKSQ 254
           WSK+ 
Sbjct: 364 WSKNN 368


>AT5G24320.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:8284858-8287651 REVERSE LENGTH=698
          Length = 698

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 32/185 (17%)

Query: 82  RRSSSATDDSQDGTFHGP--ERLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDG 139
           +RS+   D+  +    G   ER++V++Y K  KE++AL+K QEIQAH G+I ++KFS DG
Sbjct: 204 KRSAGGDDNGGEVAVCGSRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDG 263

Query: 140 KYLASAGEDCVIHVWQVVESERKGELLLMEKPEDVSVNMLFPLNGSPE--PAA------- 190
           +YLASAGED V+ VW VVE ER  E    + P+     + F ++   E  P A       
Sbjct: 264 RYLASAGEDGVLRVWSVVEDERCEE---HDVPKIDPSCIYFEVSKLSELRPVAVEKDGIT 320

Query: 191 -ALLSPGLDINPEXXXXXXXXXXXXXMSLDQLVVPENVFGLTEKPICSFQGHLHDVLDLS 249
            +L+SP                         +++P  +F + +KP+  F GH  D+LD+S
Sbjct: 321 GSLMSP-----------------RKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILDIS 363

Query: 250 WSKSQ 254
           WSK+ 
Sbjct: 364 WSKNN 368


>AT1G64610.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:23998920-24001297 REVERSE LENGTH=647
          Length = 647

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 11/150 (7%)

Query: 103 RVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERK 162
           RV+ + K  KE++++   QE  AH GSI ++KFS DGKY+ASAGEDCV+ VW + E ER 
Sbjct: 194 RVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERT 253

Query: 163 GELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLV 222
               + E    V   + F +N   +     + P L IN E              S   +V
Sbjct: 254 DTYEVAE----VDSGVYFGMNQRSQ-----IEP-LKINNEKTEKKSSFLRKSSDST-CVV 302

Query: 223 VPENVFGLTEKPICSFQGHLHDVLDLSWSK 252
           +P  +F ++EKP+  F+GH+ ++LDLSWS+
Sbjct: 303 LPPTIFSISEKPLHEFKGHIGEILDLSWSE 332


>AT1G64610.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:23998920-24001297 REVERSE LENGTH=647
          Length = 647

 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 11/150 (7%)

Query: 103 RVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERK 162
           RV+ + K  KE++++   QE  AH GSI ++KFS DGKY+ASAGEDCV+ VW + E ER 
Sbjct: 194 RVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERT 253

Query: 163 GELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLV 222
               + E    V   + F +N   +     + P L IN E              S   +V
Sbjct: 254 DTYEVAE----VDSGVYFGMNQRSQ-----IEP-LKINNEKTEKKSSFLRKSSDST-CVV 302

Query: 223 VPENVFGLTEKPICSFQGHLHDVLDLSWSK 252
           +P  +F ++EKP+  F+GH+ ++LDLSWS+
Sbjct: 303 LPPTIFSISEKPLHEFKGHIGEILDLSWSE 332


>AT5G53500.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:21726167-21728524 REVERSE LENGTH=654
          Length = 654

 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 8/152 (5%)

Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
           R++V+   K  KE++ALY+SQ+I+AH G+I ++KFS DGK+LAS+GED ++ VW+VVE +
Sbjct: 195 RVKVKHCKKQAKELSALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVE-D 253

Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
           +K  L      E     M F +N   +     L P L +N E              S   
Sbjct: 254 KKSRLRRDCLNEIDPSCMYFEVNDLSQ-----LKPVL-VNEEKPKKTTESFRKTSDSA-C 306

Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSK 252
           +V P  VF + EKP+  F+GH  +VLD+SWSK
Sbjct: 307 VVFPPKVFRIMEKPLYEFRGHTGEVLDISWSK 338


>AT2G37670.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr2:15797384-15800536 REVERSE LENGTH=903
          Length = 903

 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 79/152 (51%), Gaps = 21/152 (13%)

Query: 100 ERLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVES 159
           E ++VR  GKS KE++AL+  QEIQAH G++W+IKFS D  YLAS G D VIHVW+V E 
Sbjct: 377 EWVKVRPTGKSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQEC 436

Query: 160 ERKGELLLMEKPEDVSVNMLFPLNGSPEPAAALL--SPGLDINPEXXXXXXXXXXXXXMS 217
           E      LM   E           GS  P    L  S G +I                 +
Sbjct: 437 E------LMSMNE-----------GSLTPIHPSLCDSSGNEITVVEKKKKGKGSSGRRHN 479

Query: 218 L--DQLVVPENVFGLTEKPICSFQGHLHDVLD 247
              D + VPE VF  ++KP+CS +GHL  +LD
Sbjct: 480 HIPDYVHVPETVFSFSDKPVCSLKGHLDAILD 511


>AT5G42010.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:16802280-16804757 FORWARD LENGTH=709
          Length = 709

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 9/150 (6%)

Query: 103 RVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERK 162
           RV+ + K  KE+++L   QE  AH GSI  +KFS DGKYLASAGEDCV+ VW ++E ER+
Sbjct: 233 RVQSFKKQFKELSSLCVGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERR 292

Query: 163 GELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQLV 222
                 E  E  S  + F +N   +     + P    N +              +    V
Sbjct: 293 DNEF--EVAESDSSCVYFGMNDKSQ-----IEPLKTENEKIEKSRGLLRKKSESTC--AV 343

Query: 223 VPENVFGLTEKPICSFQGHLHDVLDLSWSK 252
           +P  VF ++E P   F+GH  ++LDLSWS+
Sbjct: 344 LPSKVFSISETPQHEFRGHTGEILDLSWSE 373


>AT1G48870.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:18072325-18074457 REVERSE LENGTH=593
          Length = 593

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 41/154 (26%)

Query: 101 RLRVRQYGKSCKEVTALYKSQEIQAHTGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESE 160
           +++V+   KS  E++A Y  Q+I  H G IW++KFS DGKYLA+ GED V+ +W++  S+
Sbjct: 172 KVKVKTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSD 231

Query: 161 RKGELLLMEKPEDVSVNMLFPLNGSPEPAAALLSPGLDINPEXXXXXXXXXXXXXMSLDQ 220
                 L ++          P+N   + AA +L                           
Sbjct: 232 SLLASFLRQQE---------PIN---QQAALVL--------------------------- 252

Query: 221 LVVPENVFGLTEKPICSFQGHLHDVLDLSWSKSQ 254
              P+  F + E P     GH  DVLDL+WS S 
Sbjct: 253 --FPQKAFHIEETPFQELYGHTGDVLDLAWSDSN 284