Miyakogusa Predicted Gene

Lj3g3v0642570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642570.1 Non Chatacterized Hit- tr|I3T0M2|I3T0M2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.46,0,DUF3550,Protein of unknown function DUF3550/UPF0682;
seg,NULL; OS09G0470900 PROTEIN,NULL; FAMILY NOT,CUFF.41069.1
         (555 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03570.1 | Symbols:  | Protein of unknown function (DUF3550/U...   697   0.0  
AT4G40050.1 | Symbols:  | Protein of unknown function (DUF3550/U...   513   e-145

>AT3G03570.1 | Symbols:  | Protein of unknown function
           (DUF3550/UPF0682) | chr3:857013-860105 FORWARD
           LENGTH=607
          Length = 607

 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/600 (59%), Positives = 426/600 (71%), Gaps = 57/600 (9%)

Query: 5   NSNIPVSEAFWTLVDKADKKFSKIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKL 64
           N+NIP+SE +W+LV+KADKKFSKIRDLP+Y+RSR++ YF+KVFKVYTQLWKFQQENRQKL
Sbjct: 8   NNNIPLSEVYWSLVNKADKKFSKIRDLPFYERSRYENYFFKVFKVYTQLWKFQQENRQKL 67

Query: 65  VEAGLKRWEIGEIASRIGQLYFGQYMRTSDSNYLLESYVFYEAILTREYFKEGLFQDVNI 124
           VEAGLKRWEIGEIASRI QLY+G YMRTSD+ YL ESYVFYEAILTREYFK+GLFQD+NI
Sbjct: 68  VEAGLKRWEIGEIASRIAQLYYGHYMRTSDAGYLSESYVFYEAILTREYFKDGLFQDLNI 127

Query: 125 ANKQLRFLARFLMVCLVLNRWEMVHQLVNQLKVLVDECKRTFQESDFKEWKLVVQEIVRF 184
           ANKQLRFLARFLMVCLVL R EMVHQLV+Q K L+DECKRTFQE+DFKEWK+V QEIVRF
Sbjct: 128 ANKQLRFLARFLMVCLVLGRREMVHQLVDQFKRLIDECKRTFQETDFKEWKVVAQEIVRF 187

Query: 185 LKADTAFTNIRPLRYSLVLDPHPDT-LPQTSAAITKRSLKLQDAVLSSFHHNEVKFSELT 243
           LK+DTAF NIRPLRYSLVLDP+ D   P+ S     RSL+L DA+LSS++ NEVK+SELT
Sbjct: 188 LKSDTAFMNIRPLRYSLVLDPNLDAGTPRAS-----RSLRLTDAILSSYYCNEVKYSELT 242

Query: 244 IDTFRMLQCLEWEPSGSFYQASGSKPSQNGATGTTRISYIQDIADPTLPANPRKTILYRP 303
           +D+FRMLQCLEWEPSGS YQ++G+K  QN   G  RI+  Q + DPTLP NPRK +LYRP
Sbjct: 243 LDSFRMLQCLEWEPSGSLYQSTGAKMGQNAPVGVARINS-QSMNDPTLPPNPRKAVLYRP 301

Query: 304 SLTHFIAVLATICEELPSDGIVLVYLXXXXX--------------------------XXX 337
           S+THF+AVLATICEELPS GI+L+YL                                  
Sbjct: 302 SITHFLAVLATICEELPSHGILLLYLSASGKIGQISSSPLSARSATSVEENILRDFESHT 361

Query: 338 XXQNESGCIPFGPHGDK-----------------GSNCIYPSDFL------PFTRRPLLL 374
             Q     +   P G                   GS+ +  S ++      PFTR+PL +
Sbjct: 362 IKQETEPSLQITPSGQSLRQISEDAVSTPCGLSFGSHGLTGSSYIYPSDLVPFTRKPLFI 421

Query: 375 VIDNDNSKAFKVIAEAEKGKPVAMLLSPSCTPP-VEFDFSHHSNGSLFTMFLTAPLQAFC 433
           +ID+D+S  FK I  AEKG+P A+LLSPS TPP +  DFS   +GSLFT+FLT+P+QAFC
Sbjct: 422 IIDSDSSTVFKNICGAEKGEPAALLLSPSHTPPLISADFSRQPSGSLFTIFLTSPVQAFC 481

Query: 434 LLLGHQGTDNDLDIYNKAEMLLSSSLNNWGLALATSETLDSVWGQVLGDPFIRRLLLRFI 493
           LL     +D + DI+ KAE LLSSS+N W   LATS+TL  VW Q+L DPF+RRLLLRFI
Sbjct: 482 LLSEISASDMETDIFTKAEKLLSSSMNEWASTLATSDTLHPVWSQILKDPFLRRLLLRFI 541

Query: 494 FCQEVLARYAPVYNKKEFXXXXXXXXXXXXXXXXHSYQSVIQQLASIFGATKYFIFSEDV 553
           FC+ VLA Y PV+N K+                  + QS + Q+A++FGAT  F   +D+
Sbjct: 542 FCRAVLALYTPVFNNKQNQPECCPSLPESLLPTAPAVQSAVFQMANVFGATSKFTIPQDI 601


>AT4G40050.1 | Symbols:  | Protein of unknown function
           (DUF3550/UPF0682) | chr4:18561206-18563727 REVERSE
           LENGTH=599
          Length = 599

 Score =  513 bits (1321), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/594 (45%), Positives = 369/594 (62%), Gaps = 55/594 (9%)

Query: 10  VSEAFWTLVDKADKKFSKIRDLPYYQRSRHDTYFYKVFKVYTQLWKFQQENRQKLVEAGL 69
           VS  F  LV+ AD+KF+++RDLP + R++   YF KVFK Y +LW +QQ +R KLVE+GL
Sbjct: 6   VSSNFRALVENADRKFARVRDLPAFGRAQSH-YFQKVFKAYMKLWNYQQSHRSKLVESGL 64

Query: 70  KRWEIGEIASRIGQLYFGQYMRTSDSNYLLESYVFYEAILTREYFKEGLFQDVNIANKQL 129
            RWEIGEIASRIGQLYF QYMRTS++ +LLE++VFYEAIL R YF E   +D+    K+L
Sbjct: 65  NRWEIGEIASRIGQLYFSQYMRTSEARFLLEAFVFYEAILKRSYFDEAQGKDLGARFKEL 124

Query: 130 RFLARFLMVCLVLNRWEMVHQLVNQLKVLVDECKRTFQESDFKEWKLVVQEIVRFLKADT 189
           RF ARFL+V L+++R +M+  L ++L++LVD     F+E++FKEW+LVVQEI RF+++DT
Sbjct: 125 RFYARFLLVSLIVDRKQMLLHLADKLRLLVDHSISNFRETNFKEWRLVVQEITRFIESDT 184

Query: 190 AFTNIRPLRYSLVLDPHPDTLPQTSAAITKRSLKLQDAVLSSFHHNEVKFSELTIDTFRM 249
             T +RPLRY  +LD +P +    +    K+  K +DA+L+S+H NEVK++E+T+DT+RM
Sbjct: 185 NLTYLRPLRYCAMLDSYPASQTYLARFHAKKLFKFRDALLASYHRNEVKYAEVTLDTYRM 244

Query: 250 LQCLEWEPSGSFYQASGSKPSQNG-------ATGTTRISYIQDIADPTLPANPRKTILYR 302
           +QCLEWEPSGSFYQ    +  +NG        +G   ++   D+ADP+LP NPRK ILYR
Sbjct: 245 MQCLEWEPSGSFYQKKPVEAKENGFVVDHTLTSGLIDMNLAADMADPSLPPNPRKAILYR 304

Query: 303 PSLTHFIAVLATICEELPSDGIVLVYLXX----XXXXXXXXQNESGC------------- 345
           P+++H +AVLA IC+EL  + ++L+YL              +N  G              
Sbjct: 305 PTVSHLLAVLAMICDELSPETVMLLYLSASGGPARENVAQPENSVGSSRTSKSKLLARAS 364

Query: 346 -------------------------IPFGPH-GDKGSNCIYPSDFLPFTRRPLLLVIDND 379
                                    +  GP  G  GSN +YP D +PFTR+PL L+ID+D
Sbjct: 365 QEQKSYKSEPHSNGKLMSAEYYENHLWLGPRGGSSGSNNLYPGDLIPFTRKPLFLIIDSD 424

Query: 380 NSKAFKVIAEAEKGKPVAMLLSPSCTPPVE---FDFSHHSNGSLFTMFLTAPLQAFCLLL 436
            S+AFKV+  AE+G+PVAMLLSP   P  E    D +   NGS FT FLTAPLQAFC +L
Sbjct: 425 TSRAFKVLGGAERGEPVAMLLSP-LKPSFENPSTDDTEALNGSQFTFFLTAPLQAFCQML 483

Query: 437 GHQGTDNDLDIYNKAEMLLSSSLNNWGLALATSETLDSVWGQVLGDPFIRRLLLRFIFCQ 496
           G   T  D ++ ++AE +LS+S + W   L TS+ L+ VW QVL DPF+RRL+LRFIFC+
Sbjct: 484 GLSNTKPDPELCDEAESILSASFSEWETILLTSKVLNLVWAQVLPDPFLRRLILRFIFCR 543

Query: 497 EVLARYAPVYNKKEFXXXXXXXXXXXXXXXXHSYQSVIQQLASIFGATKYFIFS 550
            VL  ++   +   +                   QS +Q+LA   G  K F F+
Sbjct: 544 SVLTSFSRTEDDDPYLPQCHPNLPELLSSVSKPVQSSVQRLAEHLGVAKSFHFT 597