Miyakogusa Predicted Gene

Lj3g3v0642540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0642540.1 Non Chatacterized Hit- tr|A9NPM0|A9NPM0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,32.89,1e-17,seg,NULL; EF_HAND_2,EF-HAND 2; no
description,EF-hand-like domain,CUFF.41062.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G64850.1 | Symbols:  | Calcium-binding EF hand family protein...   214   2e-56

>AT1G64850.1 | Symbols:  | Calcium-binding EF hand family protein |
           chr1:24096548-24097574 REVERSE LENGTH=162
          Length = 162

 Score =  214 bits (545), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/156 (64%), Positives = 119/156 (76%)

Query: 1   MGQVFDKLQGKDWREKQIRKITDRVFERVKSQMQTNNLCFEELYIAVLLVYNDINKYIPG 60
           MGQVF+KL+GK+WR KQ++ I DRVF+R K Q    NL FEELYIAVLLVYNDINK +PG
Sbjct: 1   MGQVFNKLRGKEWRHKQVQAICDRVFDRFKMQTGRANLTFEELYIAVLLVYNDINKRLPG 60

Query: 61  PHFDPPSKEKVREVMKNCDINFDGEIDPEEFYSFIQIMTADTVTFVGQKLIITLXXXXXX 120
           PHFDPPSK+ V  +M +CDIN DGE+D EEF  FI+ +TA+T   V Q LII L      
Sbjct: 61  PHFDPPSKDLVNSIMTDCDINLDGELDREEFVKFIEQITAETFNVVSQGLIIALIVAPTV 120

Query: 121 XXXTKKATEGVPGVGKLVQRLPNSVYASLVTLAAVW 156
              TKKATEGVPGVGK+VQ+LP S+YASLVTLA +W
Sbjct: 121 AIATKKATEGVPGVGKVVQKLPTSIYASLVTLAVMW 156