Miyakogusa Predicted Gene

Lj3g3v0640360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0640360.1 Non Chatacterized Hit- tr|I1JMG9|I1JMG9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,87.36,0,TRNA
(GUANINE-N(7)-)-METHYLTRANSFERASE,NULL;
3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA
(GUAN,NODE_65917_length_1218_cov_30.502462.path1.1
         (184 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |...   257   4e-69
AT5G24840.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |...    59   1e-09

>AT5G17660.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |
           chr5:5818778-5820811 REVERSE LENGTH=312
          Length = 312

 Score =  257 bits (656), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 123/184 (66%), Positives = 147/184 (79%), Gaps = 8/184 (4%)

Query: 1   MVDIGCGSGRFLMWLAKRTPKERNYLGLEIRQRLVKRAEIWVKDLALDNIHFLFANATIS 60
           MVDIG GSGRFL+W A +  + RNYLGLEIRQ+LVKRA  WV +L L N+HF+FANA +S
Sbjct: 128 MVDIGSGSGRFLLWQANKNVESRNYLGLEIRQKLVKRANFWVNELGLSNVHFIFANAMVS 187

Query: 61  FKQLVESYPGPLLLVSILCPDPHFKKKHHKRRVLQKSLVGSIVDNLMPGGQVFVQSDVLE 120
           F+ L+ SYPGPL +VSILCPDPHFKK+H KRRV+QK LV SI+ NL PGG++FVQSDVL+
Sbjct: 188 FEHLISSYPGPLEIVSILCPDPHFKKRHQKRRVVQKPLVNSILQNLKPGGKIFVQSDVLD 247

Query: 121 VALDMRNQFD-EVDALKHIDDSNPAMLCDSE-GWLLSNPMEIRTEREIHAEFEGAKIYRR 178
           VA DMR+Q D E + L+H+D        D+E GWL  NPM IRTEREIHAEFEGA+IYRR
Sbjct: 248 VAQDMRDQLDEESNVLQHMDT------VDTEDGWLTENPMGIRTEREIHAEFEGARIYRR 301

Query: 179 LYQR 182
           LYQ+
Sbjct: 302 LYQK 305


>AT5G24840.1 | Symbols:  | tRNA (guanine-N-7) methyltransferase |
           chr5:8533897-8534652 REVERSE LENGTH=251
          Length = 251

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 36/199 (18%)

Query: 1   MVDIGCGSGRFLMWLAKRTPKERNYLGLEIRQRLVKRAEIWVKD--LAL---------DN 49
             DIGCG G  L+ LA   P +   +G+E+R ++ +    +VK+  LAL         +N
Sbjct: 67  FADIGCGFGGLLISLATLFP-DTLMIGMELRDKVTE----YVKERILALRRTSSEGQYEN 121

Query: 50  IHFLFANATISFKQLVESYPGPLLLVSILCPDPHFKKKHHKRRVLQKSLVGSIVDNLMPG 109
           I  +  N+        E   G L  +  L PDPHFK+K+H+RRV+   L+      L  G
Sbjct: 122 ISVVRTNSMKYIPNYFEK--GQLSKMFFLFPDPHFKEKNHRRRVISTHLLDEYAYVLRAG 179

Query: 110 GQVFVQSDVLEVA------LDMRNQFDEVDALKHIDDSNPAMLCDSEGWLLSNPMEIRTE 163
           G ++  +DV E+       L+    F+ +   + + D    +LC +            TE
Sbjct: 180 GIIYTITDVEELGEWMKSCLEKHPMFESLTQEELVSDPVVELLCSA------------TE 227

Query: 164 REIHAEFEGAKIYRRLYQR 182
                   G + +R +++R
Sbjct: 228 EGQKVARNGGQTFRAVFRR 246