Miyakogusa Predicted Gene

Lj3g3v0614800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0614800.1 Non Chatacterized Hit- tr|I1K8G4|I1K8G4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56746 PE,50,1e-17,
,NODE_39470_length_1005_cov_25.600000.path2.1
         (225 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02180.1 | Symbols:  | ferredoxin-related | chr1:413619-41450...   245   2e-65

>AT1G02180.1 | Symbols:  | ferredoxin-related | chr1:413619-414505
           REVERSE LENGTH=226
          Length = 226

 Score =  245 bits (625), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 114/170 (67%), Positives = 139/170 (81%), Gaps = 1/170 (0%)

Query: 29  HGNPANDIVDIINKNRTDQKLPHLNDSPGLGCMALQYVELCKGNCTDNNVVNCKPPEDDF 88
           HGN A+++V I+N+NRT +KL  LN+SPGLGCMALQYVELC+GNC  NN ++C+ PEDDF
Sbjct: 27  HGNSAHEMVSILNQNRTARKLGKLNESPGLGCMALQYVELCEGNCNVNNTLSCEHPEDDF 86

Query: 89  TEVFAPNCGVELPTFGTITGHIVGCQKKYLEPPLAFSEVLIKDKKSLSLLTNKSHTEVGV 148
           T+VFAPNCGVELPTFGTITGHI+GC  KY  P +AFS++L +D  +LS+L N+SHTEVGV
Sbjct: 87  TQVFAPNCGVELPTFGTITGHILGCSSKYAAPEVAFSDILFRDSSALSVLRNRSHTEVGV 146

Query: 149 GLVGLHNKGPFFWCVLFSNGNTNSSFVLENRGAGIHQKKGCYSGSNTTCS 198
           G+  LH KG FFWC+LFS+G  NSSFVLE+ G GI Q+ GCYSGS   CS
Sbjct: 147 GMARLH-KGTFFWCLLFSDGVKNSSFVLEDNGRGIKQRTGCYSGSAFPCS 195