Miyakogusa Predicted Gene

Lj3g3v0597310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0597310.1 Non Chatacterized Hit- tr|I1KJF7|I1KJF7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.89,0,SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,NULL; no description,Cyclin-like;
Cyclin-like,Cyclin-like;,CUFF.41002.1
         (206 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 | chr2:18442287-184...   268   1e-72
AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359...   198   2e-51
AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 | chr5:24778...   198   2e-51
AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704...   158   3e-39
AT3G05327.1 | Symbols:  | Cyclin family protein | chr3:1517581-1...   137   5e-33
AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 | chr2:18591688-185...   136   7e-33
AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-233...   136   1e-32
AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 | chr3:22379846-223...   131   3e-31

>AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 |
           chr2:18442287-18443304 REVERSE LENGTH=202
          Length = 202

 Score =  268 bits (686), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/197 (67%), Positives = 154/197 (78%), Gaps = 5/197 (2%)

Query: 1   MAELESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           MAELE+PSVM K+I FLSSLLERVAESND ++++   +Q++SVFHGLSRP I+IQSYLER
Sbjct: 1   MAELENPSVMSKLIAFLSSLLERVAESNDLTRRVATQSQRVSVFHGLSRPTITIQSYLER 60

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IFKYANCSPSCF+VAYVYLDRFT +QPSLPINSFNVHRLLITSVMVAAKF+DD+YYNNAY
Sbjct: 61  IFKYANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAY 120

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQTQPLNFADSSLSL 180
           YAKVGGI+  EMN              NVTP TF AY  +LQKEM   QPL     SL +
Sbjct: 121 YAKVGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEMTLLQPL-----SLVV 175

Query: 181 GKSLKAHLCFNEGESSH 197
             S ++ + FN+ E+SH
Sbjct: 176 VPSSRSLITFNDDEASH 192


>AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359253
           REVERSE LENGTH=216
          Length = 216

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 100/198 (50%), Positives = 134/198 (67%)

Query: 9   VMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLERIFKYANCS 68
           +MP VIT +SSLL+RV+E+ND   +  + +++IS F+ +++P+ISI+SY+ERIFKYA+CS
Sbjct: 19  IMPNVITAMSSLLQRVSETNDDLSRPFREHKRISAFNAVTKPSISIRSYMERIFKYADCS 78

Query: 69  PSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGIT 128
            SC+IVAY+YLDRF QKQP LPI+S NVHRL+ITSV+V+AKFMDD+ YNNA+YAKVGGIT
Sbjct: 79  DSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVSAKFMDDLCYNNAFYAKVGGIT 138

Query: 129 KIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQTQPLNFADSSLSLGKSLKAHL 188
             EMN              NVT  T+  YC  LQ+EM+     +       L +S   +L
Sbjct: 139 TEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVMRTMYSPLLEPAFLVRSFHKNL 198

Query: 189 CFNEGESSHQKQQQQLAV 206
             N  +  H+  Q   AV
Sbjct: 199 LKNLYDEDHRNSQVTSAV 216


>AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 |
           chr5:24778265-24779019 FORWARD LENGTH=219
          Length = 219

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/209 (51%), Positives = 140/209 (66%), Gaps = 10/209 (4%)

Query: 3   ELESP--SVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLER 60
           +L+ P   +MP V+T +S LL+RV+E+ND     L   QK S F G+++P+ISI+SYLER
Sbjct: 13  DLQEPLAEIMPSVLTAMSYLLQRVSETNDN----LSQKQKPSSFTGVTKPSISIRSYLER 68

Query: 61  IFKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAY 120
           IF+YANCS SC+IVAY+YLDRF +KQP LPINSFNVHRL+ITSV+V+AKFMDD+ YNN Y
Sbjct: 69  IFEYANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEY 128

Query: 121 YAKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEM---LQTQPLNFADSS 177
           YAKVGGI++ EMN              NVT  TF  YC  LQ+EM   ++ + L    SS
Sbjct: 129 YAKVGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREMAMLMKMKSLFLEPSS 188

Query: 178 LSLGKSLKAHLCFNEGES-SHQKQQQQLA 205
             +    K  +  +E +S S    ++QLA
Sbjct: 189 FKISSKTKLVMYPHEEDSLSTHHNKKQLA 217


>AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704813
           REVERSE LENGTH=210
          Length = 210

 Score =  158 bits (399), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 5/177 (2%)

Query: 3   ELESPSVMPKVITFLSSLLERVAESNDQ-SQQLLQHNQKISVFHGLSRPNISIQSYLERI 61
           E  + +  P+V+T +S ++E++   N+  ++Q     + +  FHG+  P+ISI  YLERI
Sbjct: 17  ESATEAATPRVLTIISHVMEKLVARNEWLAKQTKGFGKSLEAFHGVRAPSISIAKYLERI 76

Query: 62  FKYANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYY 121
           +KY  CSP+CF+V YVY+DR   K P   + S NVHRLL+T VM+AAK +DD++YNN +Y
Sbjct: 77  YKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDDVHYNNEFY 136

Query: 122 AKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEMLQTQPLNFADSSL 178
           A+VGG++  ++N               V+   F++YC HL+KEM     LN A SSL
Sbjct: 137 ARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEM----QLNDAVSSL 189


>AT3G05327.1 | Symbols:  | Cyclin family protein |
           chr3:1517581-1518399 REVERSE LENGTH=212
          Length = 212

 Score =  137 bits (345), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 103/165 (62%), Gaps = 7/165 (4%)

Query: 8   SVMPKVITFLSSLLERVAESNDQSQQLLQHNQ--KISVFHGLSRPNISIQSYLERIFKYA 65
           S  P+VIT L+S LE++ + N +     +HN+  +I++FHG   P++SI  Y ERI +YA
Sbjct: 28  STPPRVITLLASTLEKMIQKNKKKFHT-RHNKADEITMFHGSKAPSLSIYRYTERIHRYA 86

Query: 66  NCSPSCFIVAYVYLDRFTQKQPSLP----INSFNVHRLLITSVMVAAKFMDDMYYNNAYY 121
            CSP CF+ A+ Y+ R+ Q+  +      + S NVHRLLITS++VAAKF++   YNNAYY
Sbjct: 87  QCSPVCFVAAFAYILRYLQRPEATSTARRLTSLNVHRLLITSLLVAAKFLERQCYNNAYY 146

Query: 122 AKVGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEML 166
           AK+GG++  EMN               +T  TF+ +C+ LQKE +
Sbjct: 147 AKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKETV 191


>AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 |
           chr2:18591688-18592443 FORWARD LENGTH=222
          Length = 222

 Score =  136 bits (343), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 99/161 (61%)

Query: 5   ESPSVMPKVITFLSSLLERVAESNDQSQQLLQHNQKISVFHGLSRPNISIQSYLERIFKY 64
           +  + +P VI+ LSSL+ER    N++  +      K  VF     P+++IQSYLERIF+Y
Sbjct: 22  DDSNTVPLVISVLSSLIERTLARNERISRSYGGFGKTRVFDCREIPDMTIQSYLERIFRY 81

Query: 65  ANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKV 124
               PS ++VAYVY+DRF Q      I+  NVHRLLIT++M+A+K+++DM Y N+Y+AKV
Sbjct: 82  TKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFAKV 141

Query: 125 GGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEM 165
           GG+   ++N              +V    F++YC HL++E+
Sbjct: 142 GGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREV 182


>AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 |
           chr3:23323143-23323893 REVERSE LENGTH=221
          Length = 221

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 86/137 (62%), Gaps = 1/137 (0%)

Query: 28  NDQSQQLLQHNQKISVFHGLSRPNISIQSYLERIFKYANCSPSCFIVAYVYLDRFTQKQP 87
           N   + LL     ++VF G S P ISI  YL+RIFKY+ CSPSCF++A++Y+D F  K  
Sbjct: 49  NHDDKILLGSPDSVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHKTR 108

Query: 88  SLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGITKIEMNXXXXXXXXXXXXXX 147
           +L +   NVHRL+IT+VM+AAK  DD Y+NNAYYA+VGG+T  E+N              
Sbjct: 109 AL-LKPLNVHRLIITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKL 167

Query: 148 NVTPGTFQAYCVHLQKE 164
            V P TF  +C  L+K+
Sbjct: 168 QVDPQTFHTHCCQLEKQ 184


>AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 |
           chr3:22379846-22380641 FORWARD LENGTH=230
          Length = 230

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 100/162 (61%), Gaps = 4/162 (2%)

Query: 8   SVMPKVITFLSSLLERVAESNDQ-SQQLL---QHNQKISVFHGLSRPNISIQSYLERIFK 63
           S  P VI+ LSSL++R    N++ S++ L       K  +F     P+++IQSYL RIF+
Sbjct: 27  SKTPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLGRIFR 86

Query: 64  YANCSPSCFIVAYVYLDRFTQKQPSLPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAK 123
           Y    PS ++VAYVY+DRF Q  P   I+  NVHRLLIT++M+A+K+++D+ Y N+Y+AK
Sbjct: 87  YTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSYFAK 146

Query: 124 VGGITKIEMNXXXXXXXXXXXXXXNVTPGTFQAYCVHLQKEM 165
           VGG+   ++N              +V    F++YC HL++E+
Sbjct: 147 VGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREV 188