Miyakogusa Predicted Gene
- Lj3g3v0596290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0596290.1 Non Chatacterized Hit- tr|I1JMN3|I1JMN3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22574
PE,73.86,0,PPR,Pentatricopeptide repeat; TPR_1,Tetratricopeptide
TPR-1; no description,Tetratricopeptide-like h,CUFF.41000.1
(407 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 516 e-147
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 1e-60
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 9e-34
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 100 3e-21
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 100 3e-21
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 100 3e-21
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 72 7e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 70 3e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 8e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 62 6e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 61 2e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 58 2e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 57 3e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 7e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 55 9e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 53 4e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 51 1e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 1e-06
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 51 1e-06
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 51 2e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 50 2e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 50 2e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 2e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 50 2e-06
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 50 3e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 49 5e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 516 bits (1330), Expect = e-147, Method: Compositional matrix adjust.
Identities = 237/381 (62%), Positives = 306/381 (80%), Gaps = 3/381 (0%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L+VYDWMNNR ERFR+SASDAAIQLDL+ KV G+ AE FFL L +N KD+R +GSLLN
Sbjct: 119 LEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNA 178
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
YV + ++KAE+LL+ MR KGY +H LPFNVMMTLYMNL+EYDKVD ++ EMK+K+IRLD
Sbjct: 179 YVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLD 238
Query: 122 IYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
IYSYNIWLSSC S +EKME V++QM D +I PNW+TFSTMAT+YIKM + EKAED L
Sbjct: 239 IYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDAL 298
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
RK+E+RI GR+RIP+HYLLSLYG +GNK E+YRVW YKS+ P+IPNLGYHA+VSSL+R+
Sbjct: 299 RKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRM 358
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
DIEGAEK+YEEW+ V+SS D R+ NLL+ YVKND ++ A F+HM + G P+S+TW
Sbjct: 359 GDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTW 418
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIG 358
E+L+ G+ + +SEAL+CL+ AF+ +GS +W+PK L LS FFKLC++E D S E ++
Sbjct: 419 EILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLE 478
Query: 359 LLRKSGFLENEAYASLIGLSD 379
LLR+SG LE+++Y +LI + +
Sbjct: 479 LLRQSGDLEDKSYLALIDVDE 499
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 201/350 (57%), Gaps = 7/350 (2%)
Query: 18 SASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLDI 77
+ SD AI LDLVAK +++ E +F++L + K + T+GSLLN Y L +KAE LL+
Sbjct: 89 TVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNK 148
Query: 78 MRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW---LSSCES 134
M+ S+ +N +MTLY E +KV +I E+K +N+ D Y+YN+W L++
Sbjct: 149 MKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATND 208
Query: 135 IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFH 194
I +E+V E+M +D + P+W+T+S MA+IY+ +KAE L++LE + RD +
Sbjct: 209 ISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQ 268
Query: 195 YLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSV 254
+L++LYG +G EVYR+W + + P N+ Y ++ L++++D+ GAE L++EW +
Sbjct: 269 FLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQAN 328
Query: 255 RSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
S+ D R+ N+LIG Y + I KA E G N+ TWE+ + Y+ ++ A
Sbjct: 329 CSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARA 388
Query: 315 LSCLKKAFAT---DGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLR 361
L C+ KA + DG K W P P T+ A + + D E L+ +L+
Sbjct: 389 LECMSKAVSIGKGDGGK-WLPSPETVRALMSYFEQKKDVNGAENLLEILK 437
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 224/379 (59%), Gaps = 12/379 (3%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L++ +WM QE ++ A D A+ LDL++K+ G++SAE+FF ++ D ++ SLL+
Sbjct: 113 LEICEWMV-VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHS 171
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL- 120
YV +L DKAE+L + M G++ LP+N M+++Y++ +++KV +LI E+K IR
Sbjct: 172 YVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK---IRTS 228
Query: 121 -DIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAED 176
DI +YN+WL++ S +E E+V+ + K+ + P+W T+S + +Y K + EKA
Sbjct: 229 PDIVTYNLWLTAFASGNDVEGAEKVYLK-AKEEKLNPDWVTYSVLTNLYAKTDNVEKARL 287
Query: 177 CLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI 236
L+++E + ++R+ + L+SL+ +G+KD V W KS F + + Y +++S+++
Sbjct: 288 ALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVV 347
Query: 237 RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSN 296
++ + E A+ LY+EW SV + DAR+ NL++ Y+ D + F+E + + G P+ +
Sbjct: 348 KLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYS 407
Query: 297 TWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEIL 356
TWE+L+ Y+ K + + L C KA D K W + K +++ + E L
Sbjct: 408 TWEILTWAYLKRKDMEKVLDCFGKAI--DSVKKWTVNVRLVKGACKELEEQGNVKGAEKL 465
Query: 357 IGLLRKSGFLENEAYASLI 375
+ LL+K+G++ + Y SL+
Sbjct: 466 MTLLQKAGYVNTQLYNSLL 484
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 204/385 (52%), Gaps = 8/385 (2%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGS---- 57
LQ+ +WM N Q+ S D A++LDL+ K HG+ E +F L + R S
Sbjct: 90 LQMMEWMEN-QKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLP 148
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
LL YV ++ +AE+L++ + G+++ PFN MM LY +Y+KV M++S MK
Sbjct: 149 LLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNK 208
Query: 118 IRLDIYSYNIWLSSC---ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
I ++ SYN+W+++C + +E V+++M D ++ WS+ T+A +YIK EKA
Sbjct: 209 IPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKA 268
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSS 234
L E + +R+ + +L++LY +GNK+ V R+W KS+ I + Y ++SS
Sbjct: 269 RLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSS 328
Query: 235 LIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPN 294
L++ D+E AE+++ EW + + D R+ N+L+G YV+N I KA + + + G PN
Sbjct: 329 LVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPN 388
Query: 295 SNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTE 354
TWE+L EG++ + + +A+ + + F W+P + A + + E+
Sbjct: 389 YKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEAT 448
Query: 355 ILIGLLRKSGFLENEAYASLIGLSD 379
+ L + G Y L+ + +
Sbjct: 449 AYVRDLHRLGLASLPLYRLLLRMHE 473
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 212/377 (56%), Gaps = 6/377 (1%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L++++WM ++ F + SD AI+L+L+AK G+ +AE +F +L D++K++ T+GSLLN
Sbjct: 92 LEIFEWMERKEIAF--TGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNC 149
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
Y + + KA++ + M +V +SLPFN +M +YM L + +KV L+ MKEK+I
Sbjct: 150 YCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPC 209
Query: 122 IYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+Y++W+ SC S++ + E+V ++M + + +W+TF+ +A IYIK+ + KAE+ L
Sbjct: 210 DITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEAL 269
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
+ LE+ + R +H+L++LY G+ N EVYRVW K +P + N Y ++ +L ++
Sbjct: 270 KSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKL 329
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
DDI+G +K++ EW S + D R+ N+ I Y+K + ++A F S
Sbjct: 330 DDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKAR 389
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIG 358
+LL + + + AL + A D K+W +S+FF ++ D E
Sbjct: 390 QLLMMHLLKNDQADLALKHFEAA-VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCK 448
Query: 359 LLRKSGFLENEAYASLI 375
L K L +E Y L+
Sbjct: 449 TLTKWSPLSSETYTLLM 465
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 205/380 (53%), Gaps = 8/380 (2%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKR-THGSLLN 60
+++DWM R+ F VS D AI LDL+ K G+ +AE +F NL + K+ + T+G+L+N
Sbjct: 123 FEIFDWMEKRKMTFSVS--DHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMN 180
Query: 61 VYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
Y ++KA++ +IM +V +SLPFN MM++YM L + +KV +L+ MK++ I
Sbjct: 181 CYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISP 240
Query: 121 DIYSYNIWLSSCESI---EKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
+Y+IW+ SC S+ + +E++ ++MGKD W+TFS +A IY K +EKA+
Sbjct: 241 CGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSA 300
Query: 178 LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIR 237
L+ +E ++ +R H+L+SLY G+ EVYRVW + K P + NL Y ++ ++ +
Sbjct: 301 LKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSK 360
Query: 238 IDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNT 297
+ D++G +K++ EW S + D RL N+ I Y+K + ++A + P S
Sbjct: 361 LGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKA 420
Query: 298 WELLSEGYIADKRVSEALSCLKKAF--ATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEI 355
+LL + + + A+ L+ A + + W +S FF + D E
Sbjct: 421 RQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAED 480
Query: 356 LIGLLRKSGFLENEAYASLI 375
+L L++E LI
Sbjct: 481 FCKILSNWKPLDSETMTFLI 500
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 199/369 (53%), Gaps = 7/369 (1%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+ DWM+ + +S D AI+LDL+AKV G+ AE+FF + ++ +G+LLN
Sbjct: 90 LQISDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNC 148
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
Y ++ KAE + M+ G++ LP+NVM+ LY+ +Y V+ L+ EM+++ ++ D
Sbjct: 149 YASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPD 208
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
I++ N L S +E ME+ + D + +W T++ A YIK EKA + L
Sbjct: 209 IFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEML 268
Query: 179 RKLESRIKGRDRI-PFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIR 237
RK E + + R + L+S YG G K+EVYR+WS YK + N GY +++S+L++
Sbjct: 269 RKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLK 327
Query: 238 IDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNT 297
+DDIE EK+ EEW + S D R+ +LLI Y K ++KA + V +++T
Sbjct: 328 MDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTST 387
Query: 298 WELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILI 357
WE L+ GY ++ +A+ K+A W+P + L + + + D ++
Sbjct: 388 WERLALGYKMAGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDMEGLRKIL 446
Query: 358 GLLRKSGFL 366
LL + G +
Sbjct: 447 RLLSERGHI 455
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 191/354 (53%), Gaps = 6/354 (1%)
Query: 17 VSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLD 76
+S D AI+LDL+AKV G+ AE+FF + ++ +G+LLN Y ++ KAE +
Sbjct: 9 ISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQ 68
Query: 77 IMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL---SSCE 133
M+ G++ LP+NVM+ LY+ +Y V+ L+ EM+++ ++ DI++ N L S
Sbjct: 69 EMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVS 128
Query: 134 SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRI-P 192
+E ME+ + D + +W T++ A YIK EKA + LRK E + + R
Sbjct: 129 DVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHA 188
Query: 193 FHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWV 252
+ L+S YG G K+EVYR+WS YK + N GY +++S+L+++DDIE EK+ EEW
Sbjct: 189 YEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDDIEEVEKIMEEWE 247
Query: 253 SVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVS 312
+ S D R+ +LLI Y K ++KA + V +++TWE L+ GY ++
Sbjct: 248 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 307
Query: 313 EALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSGFL 366
+A+ K+A W+P + L + + + D ++ LL + G +
Sbjct: 308 KAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHI 360
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 198/378 (52%), Gaps = 5/378 (1%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L+V WMN S ++ A+ LDL+ +V+G +AE +F NL + K+ +T+G+LLN
Sbjct: 77 LEVSKWMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNC 135
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
YV + +K+ + M+ G+V SL +N +M LY N+ +++KV ++ EMKE+N+ D
Sbjct: 136 YVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPD 195
Query: 122 IYSYNIWLSSCESIEKMEQV---FEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
YSY I +++ ++ +E++ M + I +W+T++ A YI ++A + L
Sbjct: 196 NYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELL 255
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
+ E+R++ +D +++L++LY +G K EV R+W K + N Y ++ SL++I
Sbjct: 256 KMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKI 315
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
D + AE++ EW S + D R+ N +I Y+ +KA E + G +W
Sbjct: 316 DALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESW 375
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATD-GSKSWKPKPLTLSAFFKLCQDEDDTASTEILI 357
EL++ Y + A C+K A + GS+ W+P +++ DE E +
Sbjct: 376 ELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFV 435
Query: 358 GLLRKSGFLENEAYASLI 375
LR + + Y +L+
Sbjct: 436 ASLRNCIGVNKQMYHALV 453
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 153/262 (58%), Gaps = 6/262 (2%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L+V +WM +E ++S +D A ++DL++KV G+ +AER+F L + K T+ SLL+
Sbjct: 107 LEVTEWMVQHEES-KISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHA 165
Query: 62 YVHYRLKDKAESLLD-IMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
Y + ++AE+L I+ S ++ +N MMTLYM++ + +KV +I +K+K +
Sbjct: 166 YAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSP 225
Query: 121 DIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
DI++YN+WLSSC + I+++ ++ E+M D + W + + +IYI ++ AE
Sbjct: 226 DIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAEST 285
Query: 178 LR-KLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI 236
L + E I R+ I + +L+ L+ G+GNK + ++W + ++ + + Y ++SS +
Sbjct: 286 LPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYL 345
Query: 237 RIDDIEGAEKLYEEWVSVRSSD 258
+ + AE++ +W ++++
Sbjct: 346 MLGHLREAEEIIHQWKESKTTE 367
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 180/381 (47%), Gaps = 21/381 (5%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQV +WM+ +++ + D A +L L+ V G+ AE+FF ++ N + + SLLN
Sbjct: 88 LQVSEWMS-KEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNS 146
Query: 62 YVHY-RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
Y + KAE+ MR G ++ +P+N MM+LY LK +KV+ L+ EMK+ ++
Sbjct: 147 YARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEA 206
Query: 121 DIYSYN----IWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAED 176
D + N ++ + C+ E ME+ + I W T MA Y++ KA
Sbjct: 207 DNVTVNNVLKLYSAVCDVTE-MEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMK 265
Query: 177 CLRKLESRIKGRD-RIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSL 235
LR E + + + + +L+ LYG GN++EV RVW YKS N GY ++ SL
Sbjct: 266 MLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSL 325
Query: 236 IRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
+++DDI GAE++Y+ W S+ D R+ +L Y +KA T N
Sbjct: 326 LKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMNK 385
Query: 296 NTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF---KLCQ--DEDDT 350
LL + D+ L CL K S K L +S + ++C ED
Sbjct: 386 PVTPLLEQW--GDQMKPSDLKCLIKNLRDSKQFS---KALQVSEWMGEKQVCNLYLEDYA 440
Query: 351 AS---TEILIGLLRKSGFLEN 368
A TE ++GL + EN
Sbjct: 441 ARLYLTENVLGLEEAEKYFEN 461
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 193/384 (50%), Gaps = 25/384 (6%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+ +W++ ++ F + D A +LDL++KV G E + + ++ + + + +LL
Sbjct: 178 LQMTEWLDENKQ-FEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLAN 236
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
+V AE++ + M+ G+ + + N M+ LY + + K+ ++ ++++N++ +
Sbjct: 237 HVATSNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPN 295
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+ +Y I + S I MEQ+ E M K + + + +A Y EKAE L
Sbjct: 296 LNTYKILIDTKGSSNDITGMEQIVETM-KSEGVELDLRARALIARHYASAGLKEKAEKVL 354
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI-- 236
+++E +R LLS+YG + +DEV RVW + N Y+ ++++++
Sbjct: 355 KEMEGESLEENRHMCKDLLSVYGYLQREDEVRRVWKICEE------NPRYNEVLAAILAF 408
Query: 237 -RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
+ID ++ AE ++E+ + + + + ++L+ YV + + + + + M+D G +
Sbjct: 409 GKIDKVKDAEAVFEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGA 468
Query: 296 NTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD---EDDTAS 352
TW+ + + Y+ V +A S L KA +S + KPL +S+F L + D +
Sbjct: 469 LTWDAVIKLYVEAGEVEKAESSLSKAI-----QSKQIKPL-MSSFMYLMHEYVRRGDVHN 522
Query: 353 TEILIGLLRKSGFLENE-AYASLI 375
TE + ++++G+ AY +LI
Sbjct: 523 TEKIFQRMKQAGYQSRFWAYQTLI 546
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 175/370 (47%), Gaps = 18/370 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+ +W+ + + ++ D A +LDL K+ G+ E + + K + + +LL
Sbjct: 180 LQMSEWLEANK-KIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
V K+E + + M+ G+ + + M+ L+ + D+L+ M+++NI+
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLL-MEKENIKPS 297
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+ +Y I + + I MEQ+ E M KD + ++ T + A Y +KAE L
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETM-KDEGVELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
+++E +R F LLS+Y +G +DEV R+W +S +L A + + ++
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESL---AAIQAFGKL 413
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
+ ++ AE ++E+ V + + ++L+ YV + + K + + M + G + TW
Sbjct: 414 NKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTW 473
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD---EDDTASTEI 355
+ L + Y+ V +A S L KA +K L +++F + + D +TE
Sbjct: 474 DALIKLYVEAGEVEKADSLLDKASKQSHTK------LMMNSFMYIMDEYSKRGDVHNTEK 527
Query: 356 LIGLLRKSGF 365
+ +R++G+
Sbjct: 528 IFLKMREAGY 537
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 175/370 (47%), Gaps = 18/370 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+ +W+ + + ++ D A +LDL K+ G+ E + + K + + +LL
Sbjct: 180 LQMSEWLEANK-KIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
V K+E + + M+ G+ + + M+ L+ + D+L+ M+++NI+
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLL-MEKENIKPS 297
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+ +Y I + + I MEQ+ E M KD + ++ T + A Y +KAE L
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETM-KDEGVELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
+++E +R F LLS+Y +G +DEV R+W +S +L A + + ++
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESL---AAIQAFGKL 413
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
+ ++ AE ++E+ V + + ++L+ YV + + K + + M + G + TW
Sbjct: 414 NKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTW 473
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD---EDDTASTEI 355
+ L + Y+ V +A S L KA +K L +++F + + D +TE
Sbjct: 474 DALIKLYVEAGEVEKADSLLDKASKQSHTK------LMMNSFMYIMDEYSKRGDVHNTEK 527
Query: 356 LIGLLRKSGF 365
+ +R++G+
Sbjct: 528 IFLKMREAGY 537
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 175/370 (47%), Gaps = 18/370 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+ +W+ + + ++ D A +LDL K+ G+ E + + K + + +LL
Sbjct: 180 LQMSEWLEANK-KIEMTERDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLAN 238
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
V K+E + + M+ G+ + + M+ L+ + D+L+ M+++NI+
Sbjct: 239 CVAAGNVKKSELVFNKMKDLGFPLSGFTCDQMLLLHKRIDRKKIADVLLL-MEKENIKPS 297
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+ +Y I + + I MEQ+ E M KD + ++ T + A Y +KAE L
Sbjct: 298 LLTYKILIDVKGATNDISGMEQILETM-KDEGVELDFQTQALTARHYSGAGLKDKAEKVL 356
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
+++E +R F LLS+Y +G +DEV R+W +S +L A + + ++
Sbjct: 357 KEMEGESLEANRRAFKDLLSIYASLGREDEVKRIWKICESKPYFEESL---AAIQAFGKL 413
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
+ ++ AE ++E+ V + + ++L+ YV + + K + + M + G + TW
Sbjct: 414 NKVQEAEAIFEKIVKMDRRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTW 473
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD---EDDTASTEI 355
+ L + Y+ V +A S L KA +K L +++F + + D +TE
Sbjct: 474 DALIKLYVEAGEVEKADSLLDKASKQSHTK------LMMNSFMYIMDEYSKRGDVHNTEK 527
Query: 356 LIGLLRKSGF 365
+ +R++G+
Sbjct: 528 IFLKMREAGY 537
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 151/331 (45%), Gaps = 6/331 (1%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L++ +W+ R+ +R+ + + L+ K+HGVS E+ F + +++ + +L+
Sbjct: 117 LELMEWII-RERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIA 175
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
+ + A + MR GY L +N ++ + ++ MK
Sbjct: 176 CLDQGVIRLALEYMKKMRELGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPH 235
Query: 122 IYSYNIWL---SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+ +Y+I + ++ +I+ + + F+ M K + PN ++ +A + + AE
Sbjct: 236 VSTYHILMKLEANEHNIDGVLKAFDGM-KKAGVEPNEVSYCILAMAHAVARLYTVAEAYT 294
Query: 179 RKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRI 238
++E I G + L+ LYG +G + E+ R W+ + F + + Y + R+
Sbjct: 295 EEIEKSITGDNWSTLDILMILYGRLGKEKELARTWNVIRG-FHHVRSKSYLLATEAFARV 353
Query: 239 DDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
+++ AE+L+ E +V+ + N L+ Y K+ I+KA+ F MT G PNS T+
Sbjct: 354 GNLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITY 413
Query: 299 ELLSEGYIADKRVSEALSCLKKAFATDGSKS 329
L+ G K + EAL ++ SKS
Sbjct: 414 RHLALGCAKAKLMKEALKNIEMGLNLKTSKS 444
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 41/285 (14%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
L+V DWM +++ D + + L KV + AE+FF ++ +N++ + + SLL
Sbjct: 95 LEVSDWM--VEQKMYNLPEDFSARFHLTEKVLNLEEAEKFFESIPENMRFESMYNSLLRS 152
Query: 62 YVHY---RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNI 118
Y + KAES+ M+ G ++ P+N M +LY +L DKVD ++ EMKE N+
Sbjct: 153 YARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEILREMKENNV 212
Query: 119 RLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
LD + N L ++ S +AT M++F
Sbjct: 213 ELDNVTVNNALRV-----------------------YAAVSDVAT----MDKFLAD---- 241
Query: 179 RKLESRIKGRDRIPF---HYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSL 235
RK +R+ G + + L+SLYG G ++V+RVW YK+ N + ++ SL
Sbjct: 242 RKEITRLDGLTMLAMAKAYELMSLYGEAGEIEDVHRVWDKYKATRQK-DNEEFRTLIGSL 300
Query: 236 IRIDDIEGAEKL-YEEWVSVRSSDDARLGNLLIGWYVKNDNIDKA 279
+++ D +GAEK+ Y EW D R+ ++L+ Y + + KA
Sbjct: 301 LKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYREKGMVMKA 345
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFF-LNLTDNLKDKRTHGSLLN 60
L+ WM ++ F + + D A +L L KV G+ AE FF ++ +N+KD + +LL+
Sbjct: 398 LEASTWMCQKK-VFNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLS 456
Query: 61 VYVHY-RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIR 119
Y + KAE++ + MR G PFN +++LY + V++L+ +MK KNI
Sbjct: 457 CYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIE 516
Query: 120 LDIYSYNIWLSSCE---SIEKMEQV 141
DI + N L + +I+ ME+V
Sbjct: 517 PDIVTRNNVLRANAYILAIDSMEKV 541
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQV +W+ R F +S D A +L LV G+ AE+FF ++ +N++D H +LL++
Sbjct: 85 LQVSEWITKRGI-FDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSL 143
Query: 62 Y-VHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
Y + + + +AE+ MR + ++ P+ M+ LY L E + +D ++ +MKE +
Sbjct: 144 YTISKKTRHEAEATYQTMRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEH 203
Query: 121 D--IYSYNIW--LSSCESIEKMEQVFEQMG---KDPAIVPNWSTFSTMATIYIKMNQFEK 173
D + + N+ +S +E ME MG ++P W T ++A Y+K K
Sbjct: 204 DKNLTANNVLKAYASLPDVEAMEMFL--MGLEVEEPRFSLAWQTGISIAKAYLKGGSSRK 261
Query: 174 AEDCLRKLESRIKGRDRIPFH-YLLSLYGGVGNKDEVYRV 212
A + LR+ E + + + + L+ +Y G K + R+
Sbjct: 262 AVEMLRRTELVVDTKSKDSANKVLMMMYWDAGAKQDASRL 301
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 138/293 (47%), Gaps = 10/293 (3%)
Query: 35 VSSAERFFLNLT--DNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNV 92
V E+ F ++ D + D S+++++ DKA + ++ G + ++ + +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 93 MMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDP 149
++ Y L +EM ++ +D+ +YN L C+ + + +++F +M +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TER 474
Query: 150 AIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEV 209
A+ P+ T + + + K+ + A + +K++ + D + ++ LL +G VG+ D
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 210 YRVWS--TYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLI 267
+W+ K I PT + Y +V++L + A ++++E +S + N +I
Sbjct: 535 KEIWADMVSKEILPT--PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 268 GWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
Y ++ N +F E M G VP+ ++ L G++ ++ +S+A +KK
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 38/282 (13%)
Query: 76 DIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESI 135
+I RS G I+ N+M+ + +KV +S+++EK + DI +YN +S+ S
Sbjct: 225 EISRS-GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 136 EKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQFEKA------------------- 174
ME+ FE M P P T++T+ K ++E+A
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 175 -----EDCLR-------KLESRIKGRDRIP----FHYLLSLYGGVGNKDEVYRVWSTYKS 218
E C + K+ S ++ RD +P F ++SL+ GN D+ +++ K
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 219 IFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDK 278
N+ Y ++ R I A L E + + D N ++ K + +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 279 ALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
A F MT+ P+S T +L +G+ + A+ +K
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 127/279 (45%), Gaps = 10/279 (3%)
Query: 49 LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDM 108
+ D + L+ Y + A +L + M +G + + +N ++ K + D
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L +EM E+ + D Y+ I + C+ +++ ++F++M K+ I + T++T+ +
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGF 525
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTI 223
K+ + A++ + S+ I + L++ G+ E +RVW K+I PT+
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 224 PNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFF 283
+ ++++ R + E E+ +S D N LI +V+ +N+ KA
Sbjct: 586 --MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 284 EHMTD--GGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
+ M + GG VP+ T+ + G+ ++ EA L+K
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRK 682
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 125/291 (42%), Gaps = 8/291 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ +L++ Y L ++A L++ M KG+ +N ++ +Y++ +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 111 SEMKEKNIRLDIYSY-NIWLSSCES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
+EM + D +Y ++ + +C+ + + E+VF M + +VP+ FS+M +++ +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTR 387
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+KA ++ D + + L+ Y G + + + +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y+ I+ L + + A+KL+ E D+ +LI + K N+ A+ F+ M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLS 338
+ + T+ L +G+ + A K+ +A SK P P++ S
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTA----KEIWADMVSKEILPTPISYS 554
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 131/318 (41%), Gaps = 8/318 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
DK T+ +LL+VY +A +L+ M G+ + +N +++ Y D+ L
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKME---QVFEQMGKDPAIVPNWSTFSTMATIYIK 167
++M EK + D+++Y LS E K+E +FE+M ++ PN TF+ +Y
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGN 431
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+F + ++ D + ++ LL+++G G EV V+ K
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
++ ++S+ R E A +Y + + D N ++ + +++ M
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDE 347
DG PN T+ L Y K + S ++ + S +P+ + L +C
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY----SGVIEPRAVLLKTLVLVCSKC 607
Query: 348 DDTASTEILIGLLRKSGF 365
D E L++ GF
Sbjct: 608 DLLPEAERAFSELKERGF 625
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 135/309 (43%), Gaps = 12/309 (3%)
Query: 2 LQVYDW-MNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDN--LKDKRTHGSL 58
L+ +DW M + + + S AI + ++ K VSSA F L ++ D ++ SL
Sbjct: 155 LRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 59 LNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNL-KEYDKVDMLISEMKEKN 117
++ + + +A ++ M G + +NV++ ++ + ++K+ L+ +MK
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 118 IRLDIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
I D Y+YN ++ C+ ++ QVFE+M K + T++ + +Y K ++ ++A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEM-KAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIV 232
L ++ + ++ L+S Y G DE + + K P + Y ++
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV--FTYTTLL 391
Query: 233 SSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
S R +E A ++EE + + N I Y + + F+ + G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 293 PNSNTWELL 301
P+ TW L
Sbjct: 452 PDIVTWNTL 460
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 28 LVAKVHGVSSAERFFLNLTDN--LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVI 85
+ +K + AER F L + D T S++++Y ++ KA +LD M+ +G+
Sbjct: 603 VCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 86 HSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYN-IWLSSCES--IEKMEQVF 142
+N +M ++ ++ K + ++ E+ K I+ DI SYN + + C + + ++F
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIF 722
Query: 143 EQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGG 202
+M ++ IVP+ T++T Y + FE+A +R + ++ ++ ++ Y
Sbjct: 723 SEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Query: 203 VGNKDEVYRVWSTYKSIFPTIP 224
+ KDE +++ P P
Sbjct: 782 LNRKDEAKLFVEDLRNLDPHAP 803
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 115/270 (42%), Gaps = 10/270 (3%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ ++L + +++E +L M + L + ++ Y N KE + L
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 111 SEMKEKNIR---LDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
E+ I + + + + S C+ + + E+ F ++ K+ P+ +T ++M +IY +
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL-KERGFSPDITTLNSMVSIYGR 641
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY---GGVGNKDEVYRVWSTYKSIFPTIP 224
KA L ++ R ++ L+ ++ G +E+ R K I P I
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA-KGIKPDI- 699
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
+ Y+ ++ + R + A +++ E + D N IG Y + ++A+
Sbjct: 700 -ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVR 758
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
+M G PN NT+ + +GY R EA
Sbjct: 759 YMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 173/380 (45%), Gaps = 38/380 (10%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNV 61
LQ+++W+ + F + ++ A QLDLVAKVH + AE F ++ ++ + + + +LL
Sbjct: 193 LQLWEWLGANTQ-FEFTEANYASQLDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLAN 251
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLD 121
V +KAE + + M+ + N ++ LY ++ + K+ ++ M+ +NI+
Sbjct: 252 CVLKHHVNKAEDIFNKMKELKFPTSVFACNQLLLLY-SMHDRKKISDVLLLMERENIKPS 310
Query: 122 IYSYNIWLSS---CESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCL 178
+Y+ ++S I ME++ E + K+ I + S +A YI+ E+A+D +
Sbjct: 311 RATYHFLINSKGLAGDITGMEKIVETI-KEEGIELDPELQSILAKYYIRAGLKERAQDLM 369
Query: 179 RKLESRIKGRDRIPF--HYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI 236
+++E KG + P+ LL LY +G+ D V R+ S + P N
Sbjct: 370 KEIEG--KGLQQTPWVCRSLLPLYADIGDSDNVRRL-SRFVDQNPRYDNC---------- 416
Query: 237 RIDDIEGAEKL----YEEWVSVRSSDDARLGNL-----LIGWYVKNDNIDKALNFFEHMT 287
I I+ KL E V R + ++ + L+ Y +N + K + + M
Sbjct: 417 -ISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALMEIYTENKMLAKGRDLVKRMG 475
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPL--TLSAFFKLCQ 345
+ G +TW L + YI V +A L +A +K K +P+ T A +
Sbjct: 476 NAGIAIGPSTWHALVKLYIKAGEVGKAELILNRA-----TKDNKMRPMFTTYMAILEEYA 530
Query: 346 DEDDTASTEILIGLLRKSGF 365
D +TE + ++++ +
Sbjct: 531 KRGDVHNTEKVFMKMKRASY 550
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDML 109
D T SLLN Y H + A +L+D M GY + F ++ L+++ K + V L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-AL 210
Query: 110 ISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIK 167
+ +M ++ + D+ +Y ++ ++ + K A I N F+T+ K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPN 225
E A D ++E++ + + ++ L++ G + R+ S K I P +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV-- 328
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ ++A++ + + + AEKL+EE + D NLLI + ++ +D+A F+
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
M +PN T+ L G+ KRV + + ++
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 157/406 (38%), Gaps = 81/406 (19%)
Query: 10 NRQERFRVSASDAAIQ--LDLVAKVHGVSSAERFFLNL-TDNLK-DKRTHGSLLNVYVHY 65
N+ E R+ A+ +D + K V A F + T ++ + T+ SL+N +Y
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 66 RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSY 125
A LL M K + + FN ++ + + + + L EM +++I D +Y
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 126 NIWLSS-C--ESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKL 181
N+ ++ C +++ +Q+F+ M KD +PN T++T+ + K + E + R++
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKD--CLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 182 ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDI 241
R G VGN + Y I+ + D
Sbjct: 425 SQR----------------GLVGN-------------------TVTYTTIIQGFFQAGDC 449
Query: 242 EGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFF------------------ 283
+ A+ ++++ VS R D ++L+ +D AL F
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 284 -EHMTDGGSV-------------PNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKS 329
E M G V P+ T+ + G + + + EA +K DG+
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK-MKEDGTL- 567
Query: 330 WKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSGFLENEAYASLI 375
P T + + + D A++ LI +R SGF+ + + SL+
Sbjct: 568 --PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 142/346 (41%), Gaps = 24/346 (6%)
Query: 49 LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDM 108
+ + +T L+N A+ L+ +M SKGY FN+++ Y + +
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 109 LISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYI 166
++ M + + D+Y+YN L+ K E V E + PN TF+ +
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVW----STYK--SIF 220
+ + ++A L +++++ D + F L+ + G+ D Y ++ YK S
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 221 PTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKAL 280
PT Y+ I+ + ++ AEKL++E V D L++ + K N++
Sbjct: 603 PT-----YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 281 NFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAF 340
F M + G +P+ T + + RV EA + + K L A
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ---------KGLVPEAV 708
Query: 341 FKLCQ-DEDDTASTEILIGLLRKSGFLENEAYASLI-GLSDATIGK 384
+C D+ + A+ ++++ L K + AY L GL D + K
Sbjct: 709 NTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRK 754
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 17/291 (5%)
Query: 35 VSSAERFFLNLTDN--LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNV 92
V AER + N + D+ T+ SL++ H ++A +L + KG + + +N
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 93 MMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIV 152
++ N + L +EM EK + ++ ++NI ++ + KM V + G ++
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN---GLCKMGCVSDADGLVKVMI 453
Query: 153 -----PNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKD 207
P+ TF+ + Y + E A + L + D ++ LL+ G+
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN---GLCKTS 510
Query: 208 EVYRVWSTYKSIFP--TIPNL-GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGN 264
+ V TYK++ PNL ++ ++ SL R ++ A L EE + + DA
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 265 LLIGWYVKNDNIDKALNFFEHMTDGGSVPNSN-TWELLSEGYIADKRVSEA 314
LI + KN ++D A F M + V +S T+ ++ + V+ A
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 5/250 (2%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+G+L+N V R A LL M +GY ++ ++V+++ + ++ L +M
Sbjct: 329 TYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Query: 114 KEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQF 171
EK + +I Y++ + K + E + + A +PN T+S++ + K
Sbjct: 389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLC 448
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
E+A ++++ R++ + L+ GVG E VWS +I + Y +I
Sbjct: 449 EEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSI 508
Query: 232 VSSLIRIDDIEGAEKLYEEWVS---VRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+ L I ++ A KLY E + +S D N+L+ +I +A++ M D
Sbjct: 509 IKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLD 568
Query: 289 GGSVPNSNTW 298
G P+ T
Sbjct: 569 RGCDPDVITC 578
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 12/323 (3%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDL--VAKVHGVSSAERFFLNLTDN--LKDKRTHGS 57
L+ YD++ N +S + + L + + K+ V A F + + L D T+ +
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
L++ D+A LLD M+S+G + +NV++ + +V L+ M K
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 118 IRLDIYSYNIWLSS-C--ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
+ +YN + C ++K + E+M I PN T+ T+ +K + A
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDA 346
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIV 232
L +E R ++ + L+S G +E +W K P I + Y +V
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNI--VVYSVLV 404
Query: 233 SSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
L R A+++ ++ +A + L+ + K ++A+ ++ M G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 293 PNSNTWELLSEGYIADKRVSEAL 315
N + +L +G RV EA+
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAM 487
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 153/369 (41%), Gaps = 52/369 (14%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLK---DKRTHGSL 58
LQ + +++N + AS + +D+ A++H + ++ +L+ +T +
Sbjct: 74 LQFFHFLDNHHREYVHDASSFDLAIDIAARLH-LHPTVWSLIHRMRSLRIGPSPKTFAIV 132
Query: 59 LNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNI 118
Y DKA L M G FN ++ + K +K L ++ +
Sbjct: 133 AERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-F 191
Query: 119 RLDIYSYNIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAED 176
+D +YN+ L+ I++ + E + + + I PN +T++TM + + Q A +
Sbjct: 192 SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWE 251
Query: 177 CLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY-----KSIFPTIPNLGYHAI 231
+++ R D + + ++ +G G E+ R + + + + P++ Y+A+
Sbjct: 252 FFLEMKKRDCEIDVVTYTTVVHGFGVAG---EIKRARNVFDEMIREGVLPSVAT--YNAM 306
Query: 232 VSSLIRIDDIEGAEKLYEEWVS-------------VR----------------------S 256
+ L + D++E A ++EE V +R
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC 366
Query: 257 SDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
+ + N++I +Y + ++KAL FE M G +PN +T+ +L G KR + +
Sbjct: 367 EPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVV 426
Query: 317 CLKKAFATD 325
+AFA +
Sbjct: 427 AGNQAFAKE 435
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFN-VMMTLYMNLKEYDKVDMLISE 112
++ +L+N Y + + LLD M+++ L +N V+ +++ + L +E
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAE 237
Query: 113 MKEKNIRLDIYSYNIWLSSCESI---EKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMN 169
M+ + I+ DI +YN LS+C ++ E VF M D IVP+ +T+S + + K+
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLR 296
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYH 229
+ EK D L ++ S D ++ LL Y G+ E V+ ++ T PN +
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT-PNANTY 355
Query: 230 AIVSSLI----RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+++ +L R DD+ +L+ E S + DA N+LI + + + + F
Sbjct: 356 SVLLNLFGQSGRYDDV---RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 286 MTDGGSVPNSNTWE 299
M + P+ T+E
Sbjct: 413 MVEENIEPDMETYE 426
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 122/277 (44%), Gaps = 12/277 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ +LL+ L D+AE + M G V ++ ++ + L+ +KV L+
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 111 SEMKEKNIRLDIYSYNIWLSS---CESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
EM DI SYN+ L + SI++ VF QM + PN +T+S + ++ +
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLLNLFGQ 364
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPN 225
+++ +++S D ++ L+ ++G G EV ++ ++I P +
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVS--VRSSDDARLGNLLIGWYVKNDNIDKALNFF 283
Y I+ + + E A K+ + + + S A G +I + + ++AL F
Sbjct: 425 --YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG--VIEAFGQAALYEEALVAF 480
Query: 284 EHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
M + GS P+ T+ L + V E+ + L +
Sbjct: 481 NTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 26/281 (9%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDMLISE 112
T SLLN Y H + +A +L+D M GY +++ FN ++ L+++ K + + LI
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM-ALIDR 211
Query: 113 MKEKNIRLDIYSYNIWLSS-CES---------IEKMEQVFEQMGKDPAIVPNWSTFSTMA 162
M K + D+ +Y + ++ C+ + KMEQ GK + P ++T+
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-----GK---LEPGVLIYNTII 263
Query: 163 TIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIF 220
K + A + +++E++ + + + L+S G + R+ S + I
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 221 PTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLG-NLLIGWYVKNDNIDKA 279
P + + A++ + ++ + AEKLY+E V RS D + + + LI + +D +D+A
Sbjct: 324 PDV--FTFSALIDAFVKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 280 LNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
FE M P+ T+ L +G+ KRV E + ++
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 128/269 (47%), Gaps = 16/269 (5%)
Query: 55 HGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
+ ++++ Y+ D A +L M +KG + + ++ +++ N + L+S+M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 115 EKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGK---DPAIVPNWSTFSTMATIYIKM 168
E+ I D+++++ + + K+ E+++++M K DP+IV T+S++ +
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV----TYSSLINGFCMH 374
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLL---SLYGGVGNKDEVYRVWSTYKSIFPTIPN 225
++ ++A+ + S+ D + ++ L+ Y V EV+R S + T+
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT- 433
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
Y+ ++ L + D + A+++++E VS + N L+ KN ++KA+ FE+
Sbjct: 434 --YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEA 314
+ P T+ ++ EG +V +
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ +L+ + Y+ ++ + M +G V +++ +N+++ + D +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
EM + +I +YN L C++ +EK VFE + + + P T++ M K
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCK 513
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+ E D L + D + ++ ++S + G+K+E ++ K T+PN G
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSG 572
Query: 228 -YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDA 260
Y+ ++ + +R D E + +L +E S + DA
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 606
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ +++N YV R E +L +M+ G V + + + ++M L + + + L EM
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 114 KEKNIRLDIYSYNIWLS-SCE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+E+ I D++ Y +S +C ++++ +F+++ + + P+ T+ + K+ +
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCKVGE 379
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
AE + +++S+ ++ F+ L+ Y G DE I+ + G+ A
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA-------SMIYDVMEQKGFQA 432
Query: 231 IVSSLIRIDDIEGAEKLYEE---WVSVRSSDDARLGNL----LIGWYVKNDNIDKALNFF 283
V + I K Y+E W+ +L + LI Y K N+++A F
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 284 EHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
M+ G PN+ T+ ++ Y ++ EA
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 151/352 (42%), Gaps = 34/352 (9%)
Query: 57 SLLNVYV-HYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKE 115
+L++ +V H RL D L D++ S G V +N ++ Y ++ +M+
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 116 KNIRLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFE 172
K + ++YSY I + + K+++ V +M D + PN F+ + + + K ++
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIP 476
Query: 173 KAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEV-YRVWSTYKSIFPTIP--NLGYH 229
+A + R++ + D F+ L+S G+ DE+ + +W I + + Y+
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLIS---GLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 230 AIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDG 289
++++ +R +I+ A KL E V S D N LI + +DKA + FE M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 290 GSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQD-- 346
G P++ + +L G V EA+ +K GS P +T ++ LC+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGS---TPDIVTFNSLINGLCRAGR 649
Query: 347 -ED---------------DTASTEILIGLLRKSGFLENEAYASLIGLSDATI 382
ED DT + L+ L K GF+ + G+ D +
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 132/277 (47%), Gaps = 8/277 (2%)
Query: 49 LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDM 108
+ D T+ SL+ Y L A +L MR+KG + + +++ + L + D+
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
+++EM ++ + +N +S+ C+ I + ++F +M + P+ TF+++ +
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGL 504
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIP- 224
++++ + A LR + S + + ++ L++ + G E ++ + + +F P
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN--EMVFQGSPL 562
Query: 225 -NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFF 283
+ Y++++ L R +++ A L+E+ + + N+LI ++ +++A+ F
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 284 EHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
+ M GS P+ T+ L G R+ + L+ +K
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 135/337 (40%), Gaps = 21/337 (6%)
Query: 53 RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISE 112
+++ +L + V A ++ M S+ F V+M + + E D L+ +
Sbjct: 183 KSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 113 MKEKNIRLDIYSYNIW---LSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMN 169
M + + Y LS C + + Q+ E+M VP+ TF+ + K +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL-MGCVPDAETFNDVILGLCKFD 301
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGN----KDEVYRVWSTYKSIFPTIPN 225
+ +A + ++ R D I + YL++ +G KD YR+ IF T+
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL-- 359
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
H V+ R+DD + L + S D N LI Y K + AL
Sbjct: 360 --IHGFVTHG-RLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LC 344
M + G PN ++ +L +G+ ++ EA + L + + DG KP + + C
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE-MSADG---LKPNTVGFNCLISAFC 470
Query: 345 QDEDDTASTEILIGLLRKSGFLENEAYASLI-GLSDA 380
++ + EI + RK + + SLI GL +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 13/294 (4%)
Query: 32 VHGVSSAER------FFLNLTDN--LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGY 83
+HG+ A R F+ + D+ RT+ L+ K +A +L+ M G
Sbjct: 295 IHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 84 VIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQ 140
+ + V++ + +++K L+ +M EK + ++ +YN ++ C+ IE
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD 414
Query: 141 VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY 200
V E M + + PN T++ + Y K N KA L K+ R D + ++ L+
Sbjct: 415 VVELM-ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 201 GGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDA 260
GN D YR+ S Y +++ SL + +E A L++ + +
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 261 RLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
+ LI Y K +D+A E M +PNS T+ L G AD ++ EA
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 18/246 (7%)
Query: 109 LISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYI 166
L+ EM+E I+ +I++Y + + S S K E+ E +G+ + ++PN T++ + Y
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY-----KSIFP 221
K E A D + +ESR + ++ L+ Y K V++ + + P
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC----KSNVHKAMGVLNKMLERKVLP 460
Query: 222 TIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALN 281
+ + Y++++ R + + A +L D +I K+ +++A +
Sbjct: 461 DV--VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 282 FFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF 341
F+ + G PN + L +GY +V EA L+K SK+ P LT +A
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML----SKNCLPNSLTFNALI 574
Query: 342 K-LCQD 346
LC D
Sbjct: 575 HGLCAD 580
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 130/321 (40%), Gaps = 38/321 (11%)
Query: 24 IQLDLVAKVHGVSSAERFFLNLTDN-LK-DKRTHGSLLNVYVHYRLKDKAESLLDIMRSK 81
+ +D KV V A +FF + N LK D+ T+ S++ V D+A + + +
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 82 GYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQ- 140
V + +N M+ Y + ++D+ L+ + K + +YN L+ + K+++
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 141 --VFEQMGKDPA---------------------------------IVPNWSTFSTMATIY 165
VFE+M KD A + PN T + M
Sbjct: 363 LKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN 225
K + ++A +++ ++ D I F L+ G VG D+ Y+V+ +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y +++ + E K+Y++ ++ S D +L N + K +K FE
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 286 MTDGGSVPNSNTWELLSEGYI 306
+ VP++ ++ +L G I
Sbjct: 543 IKARRFVPDARSYSILIHGLI 563
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 123/271 (45%), Gaps = 15/271 (5%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
+ +L+ + D +L M+ GY F ++ + D L+ EM
Sbjct: 170 AYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEM 229
Query: 114 KEKNIRLDIYSYNIWLSSCESIEKME---QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
K ++ DI YN+ + S + K++ + F ++ + + P+ T+++M + K N+
Sbjct: 230 KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANR 288
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHY----LLSLYGGVGNKDEVYRVWSTYKSIFPTIPN- 225
++A + LE K R R+P Y ++ YG G DE Y + ++ +IP+
Sbjct: 289 LDEAVEMFEHLE---KNR-RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK-GSIPSV 343
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y+ I++ L ++ ++ A K++EE + ++ + N+LI + +D A +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
M G PN T ++ + +++ EA +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 5/186 (2%)
Query: 136 EKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHY 195
EK +FE++ K VP+ ++S + IK + + ++ + D ++
Sbjct: 534 EKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 196 LLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVS 253
++ + G ++ Y++ K+ PT+ + Y +++ L +ID ++ A L+EE S
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTV--VTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 254 VRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSE 313
R + + + LI + K ID+A E + G PN TW L + + + ++E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 314 ALSCLK 319
AL C +
Sbjct: 711 ALVCFQ 716
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 12/241 (4%)
Query: 70 KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL 129
+A +L+D M +G+ P+ ++ + + + L+S+M+E +I+ + YN +
Sbjct: 28 QALALVDRMVEEGH----QPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAII 83
Query: 130 SS-CESIEKM--EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK 186
C+ + + +F +M D I P+ T+S M + + ++ AE LR + R
Sbjct: 84 DRLCKDGHHIHAQNLFTEM-HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI 142
Query: 187 GRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIVSSLIRIDDIEGA 244
D + F L++ G E ++ + IFPT + Y++++ + D + A
Sbjct: 143 NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT--TITYNSMIDGFCKQDRLNDA 200
Query: 245 EKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEG 304
+++ + S S D + LI Y K +D + F M G V N+ T+ L G
Sbjct: 201 KRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 260
Query: 305 Y 305
+
Sbjct: 261 F 261
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDK-RTHGSLLN 60
L+V++W+N R + AAI L ++ + + S A F + D+ + + +++
Sbjct: 175 LEVFEWLNLRHWHSPNARMVAAI-LGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMG 233
Query: 61 VYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYM---NLKEYDKVDMLISEMKEKN 117
VY KA+ L+D MR +G V + FN ++ + L V++L ++
Sbjct: 234 VYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-DMVRNSG 292
Query: 118 IRLDIYSYNIWLSSC---ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
+R D +YN LS+C +++ +VFE M + P+ T++ M ++Y + +A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSS 234
E +LE + D + ++ LL + N ++V V+ + + + Y+ I+
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 235 LIRIDDIEGAEKLYEEWVSVRSSD-DARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVP 293
+ ++ A +LY++ + + DA +LI K + +A M D G P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 294 NSNTWELLSEGYIADKRVSEA---LSCLKKA 321
T+ L GY + EA SC+ ++
Sbjct: 472 TLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 8/266 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDMLISE 112
T SLLN Y H + A +L+D M GY ++ F ++ L+++ K + V L+
Sbjct: 82 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDR 140
Query: 113 MKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQ 170
M ++ + ++ +Y + ++ ++ F + K A I + F+T+ K
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGY 228
+ A + +++E++ + + + L+S G + ++ S K I P + + +
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL--VTF 258
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+A++ + ++ AEKL+++ + D N LI + +D +DKA FE M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEA 314
P+ +T+ L +G+ KRV +
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDG 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 150/343 (43%), Gaps = 17/343 (4%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ SL++ Y A LL M K + + FN ++ ++ ++ + + L +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 114 KEKNIRLDIYSYNIWLSS-C--ESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYIKMN 169
+++I DI++YN ++ C + ++K +Q+FE M KD P+ T++T+ + K
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD--CFPDLDTYNTLIKGFCKSK 339
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLG 227
+ E + R++ R D + + L+ G+ D +V+ S + P I +
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MT 397
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y ++ L +E A ++++ D + +I K +D + F ++
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDE 347
G PN T+ + G + + + EA + LKK DG P T + + +
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKEDGP---LPDSGTYNTLIRAHLRD 513
Query: 348 DDTASTEILIGLLRKSGFLENEAYASLIGLSDATIGKGDLSRT 390
D A++ LI +R F+ + AS IGL + G L ++
Sbjct: 514 GDKAASAELIREMRSCRFVGD---ASTIGLVANMLHDGRLDKS 553
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 125/290 (43%), Gaps = 18/290 (6%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
+K +G L+ + KA +I+ +K V + +M+ Y L E + L
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+MK ++++ D+ +Y++ L+S ++ M++ E ++P+ ++ M Y +N
Sbjct: 659 EDMKRRDVKPDVVTYSVLLNSDPELD-MKREMEAFD----VIPDVVYYTIMINRYCHLND 713
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
+K + ++ R D + + LL NK E R S F P++ Y+
Sbjct: 714 LKKVYALFKDMKRREIVPDVVTYTVLLK------NKPE--RNLSREMKAFDVKPDVFYYT 765
Query: 231 I-VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDG 289
+ + +I D+ A++++++ + DA LI K + +A F+ M +
Sbjct: 766 VLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Query: 290 GSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSA 339
G P+ + L G + V +A+ +K+ K KP +LSA
Sbjct: 826 GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML----EKGIKPTKASLSA 871
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 155/350 (44%), Gaps = 36/350 (10%)
Query: 29 VAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSL 88
+ KV ++ A + F L + +D T ++ Y+ +A L D + S+ V+
Sbjct: 56 LCKVGKIAEARKLFDGLPE--RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVV--- 110
Query: 89 PFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL---SSCESIEKMEQVFEQM 145
+ M++ Y+ K+ +ML EM E+N + S+N + + I+K ++F++M
Sbjct: 111 TWTAMVSGYLRSKQLSIAEMLFQEMPERN----VVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 146 GKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGN 205
+ N ++++M ++ + ++A + L R+ RD + + ++ G
Sbjct: 167 PER-----NIVSWNSMVKALVQRGRIDEAMN----LFERMPRRDVVSWTAMVDGLAKNGK 217
Query: 206 KDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNL 265
DE R++ P + ++A+++ + + I+ A++L++ V D N
Sbjct: 218 VDEARRLFDC----MPERNIISWNAMITGYAQNNRIDEADQLFQ----VMPERDFASWNT 269
Query: 266 LIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATD 325
+I +++N ++KA F+ M + N +W + GY+ +K EAL+ K D
Sbjct: 270 MITGFIRNREMNKACGLFDRMPE----KNVISWTTMITGYVENKENEEALNVFSKML-RD 324
Query: 326 GSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSGFLENEAYASLI 375
GS KP T + C D + + L+ KS +NE S +
Sbjct: 325 GSV--KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSAL 372
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDML 109
D T SLLN Y H + A +L+D M GY + F ++ L+++ K + V L
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV-AL 210
Query: 110 ISEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYI 166
+ +M ++ + D+ +Y ++ C+ I+ + ++M K I + ++T+
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVVIYNTIIDGLC 269
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIP 224
K + A + +++++ D + L+S G + R+ S + I P +
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV- 328
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
+ + A++ + ++ + AEKLY+E + D + LI + +D +D+A + FE
Sbjct: 329 -VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
M PN T+ L +G+ KRV E + ++
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 149/346 (43%), Gaps = 17/346 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ SL++ +Y A LL M + + + F+ ++ ++ + + + L
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 111 SEMKEKNIRLDIYSYNIWLSS-C--ESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYI 166
EM +++I DI++Y+ ++ C + +++ + +FE M KD PN T+ST+ +
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYSTLIKGFC 409
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN- 225
K + E+ + R++ R + + + L+ + + D V+ S+ PN
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNI 468
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
L Y+ ++ L + + A ++E D N++I K ++ F +
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKL-C 344
++ G PN + + G+ EA S LKK DG P T + +
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK-MKEDGP---LPNSGTYNTLIRARL 584
Query: 345 QDEDDTASTEILIGLLRKSGFLENEAYASLIGLSDATIGKGDLSRT 390
+D D AS E LI +R GF + AS IGL + G L ++
Sbjct: 585 RDGDREASAE-LIKEMRSCGFAGD---ASTIGLVTNMLHDGRLDKS 626
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 138/349 (39%), Gaps = 44/349 (12%)
Query: 1 MLQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTH--GSL 58
++Q+++WM Q+ ++S S + + V VS A + ++ D + S+
Sbjct: 117 LIQLFEWM---QQHGKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYICNSI 172
Query: 59 LNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKE-YDKVDMLISEMKEKN 117
L+ V D L D M+ G + +N ++ + +K Y K LI E+
Sbjct: 173 LSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNG 232
Query: 118 IRLDIYSYNIWLSSCES---IEKMEQVFEQM---GKDPAI-------------------- 151
I++D Y L+ C S E+ E +QM G P I
Sbjct: 233 IQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKAD 292
Query: 152 -----------VPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY 200
VPN +T+ +YIK F+++ + L +LES + +P+ L+
Sbjct: 293 ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGL 352
Query: 201 GGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDA 260
G +E ++ K ++S+L R + A++L + + D
Sbjct: 353 SKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDL 412
Query: 261 RLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADK 309
+ N ++ Y + ++ + + M + P+ NT+ +L + +I +K
Sbjct: 413 VMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 19/246 (7%)
Query: 66 RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNL-------KEYDKVDMLISEMKEKNI 118
R +A+S D ++ + F + +Y NL E + + + EMK I
Sbjct: 235 RRASEAQSFFDSLKDR--------FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGI 286
Query: 119 RLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAE 175
++Y+Y+I L C I + VF M D PN TF+ + +++K + EK
Sbjct: 287 EPNVYTYSIVIDALCRCGQISRAHDVFADM-LDSGCAPNAITFNNLMRVHVKAGRTEKVL 345
Query: 176 DCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSL 235
+++ D I +++L+ + N + +V +T + ++ I +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 236 IRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
+ D+ GA ++Y + + + + N+L+ +V + + D L + M D PN
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 296 NTWELL 301
NT+ LL
Sbjct: 466 NTYRLL 471
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 132/317 (41%), Gaps = 15/317 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDK------RTH 55
L ++W +R + S +DL KV A +L D +K + T
Sbjct: 134 LAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLA----WHLIDLMKSRNVEISIETF 189
Query: 56 GSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKE 115
L+ YV L +A + M G V + F+++++ + + +K+
Sbjct: 190 TILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD 249
Query: 116 KNIRLDIYSY-NIWLSSCES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFE 172
+ D+ Y N+ C + I + E+VF++M K I PN T+S + + Q
Sbjct: 250 R-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEM-KLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 173 KAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIV 232
+A D + + I F+ L+ ++ G ++V +V++ K + + Y+ ++
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 233 SSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
+ R +++E A K+ + + +A N + + K +++ A + M +
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 293 PNSNTWELLSEGYIADK 309
PN+ T+ +L ++ K
Sbjct: 428 PNTVTYNILMRMFVGSK 444
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 11/251 (4%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW 128
+ A ++ M+SKG+ +N +++ N +V + EMKE + D SYNI
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNIL 333
Query: 129 LSSCESIEKMEQVF---EQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRI 185
+ C + +E F ++M K +VP + T++T+ N+ E AE +R++ +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQ-GMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 186 KGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDIEG 243
D + ++ L++ Y G+ + + + + I PT Y +++ L R +
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT--QFTYTSLIYVLCRKNKTRE 450
Query: 244 AEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSE 303
A++L+E+ V D + N L+ + N+D+A + + M P+ T+ L
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 304 GYIADKRVSEA 314
G + + EA
Sbjct: 511 GLCGEGKFEEA 521
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 124/306 (40%), Gaps = 18/306 (5%)
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
L+ R+ D+A +M+ KG+ + N ++TL L + + ++M
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 118 IRLDIYSYNIWLSSCESIEKMEQ------VFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
I+ ++Y++NI ++ K+++ + E G P IV T++T+ + +
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV----TYNTLVQGFSLRGRI 276
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
E A + +++S+ D ++ +LS G EV R K I ++ Y+ +
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNIL 333
Query: 232 VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
+ D+E A +E V N LI + I+ A + + G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 292 VPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAF-FKLCQDEDDT 350
V +S T+ +L GY +A + L TDG +P T ++ + LC+
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFA-LHDEMMTDG---IQPTQFTYTSLIYVLCRKNKTR 449
Query: 351 ASTEIL 356
+ E+
Sbjct: 450 EADELF 455
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDMLISE 112
T SLLN Y H + A +L+D M GY ++ F ++ L+++ K + V L+
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDR 215
Query: 113 MKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQ 170
M ++ + ++ +Y + ++ ++ F + K A I N +ST+ K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGY 228
+ A + ++E++ + I + L+S + R+ S + I P + + +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV--VTF 333
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+A++ + ++ + AEKLY+E + D + LI + +D +D+A + FE M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
PN T+ L G+ KR+ E + ++
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/266 (18%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 55 HGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
+ ++++ YR +D A +L M +KG + + ++ +++ N + + L+S+M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 115 EKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
E+ I ++ ++N + + K+ E+++++M K +I P+ T+S++ + ++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 381
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDE---VYRVWSTYKSIFPTIPNLGY 228
++A+ + S+ + + ++ L++ + DE ++R S + T+ Y
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT---Y 438
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
++ + D + A+ ++++ VS + N L+ KN ++KA+ FE++
Sbjct: 439 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEA 314
P T+ ++ EG +V +
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDG 524
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 119/266 (44%), Gaps = 8/266 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDMLISE 112
T SLLN Y H + A +L+D M GY ++ F ++ L+++ K + V L+
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDR 215
Query: 113 MKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQ 170
M ++ + ++ +Y + ++ + + K A I + F+T+ K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPNLGY 228
+ A + +++E++ + + + L+S G + ++ S K I P + + +
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL--VTF 333
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+A++ + ++ AEKLY++ + D N L+ + +D +DKA FE M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEA 314
P+ T+ L +G+ KRV +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDG 419
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 150/343 (43%), Gaps = 17/343 (4%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ SL++ Y A LL M K + + FN ++ ++ ++ + + L +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
Query: 114 KEKNIRLDIYSYNIWLSS-C--ESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYIKMN 169
+++I DI++YN ++ C + ++K +Q+FE M KD P+ T++T+ + K
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTYNTLIKGFCKSK 414
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLG 227
+ E + R++ R D + + L+ G+ D +V+ S + P I +
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI--MT 472
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y ++ L +E A ++++ D + +I K +D + F ++
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDE 347
G PN T+ + G + + + EA + LKK DG P T + + +
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK-MKEDGP---LPNSGTYNTLIRAHLRD 588
Query: 348 DDTASTEILIGLLRKSGFLENEAYASLIGLSDATIGKGDLSRT 390
D A++ LI +R F+ + AS IGL + G L ++
Sbjct: 589 GDKAASAELIREMRSCRFVGD---ASTIGLVANMLHDGRLDKS 628
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 110/247 (44%), Gaps = 8/247 (3%)
Query: 71 AESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLS 130
A+ L M KG + +N M+ + + + L+ +M E+ I D+ ++N +S
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 131 SCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKG 187
+ K+ E++ ++M I P+ T+++M + K N+F+ A + + +
Sbjct: 375 ASVKEGKLFEAEKLCDEM-LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMAS 429
Query: 188 RDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKL 247
D + F+ ++ +Y DE ++ Y+ ++ +D++ A+ L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 248 YEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIA 307
++E +S D N+L+ + +N+ +++AL FE + ++ + ++ G
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 308 DKRVSEA 314
+V EA
Sbjct: 550 GSKVDEA 556
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 124/284 (43%), Gaps = 17/284 (5%)
Query: 70 KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL 129
+A +L++ M KG I + + ++ + + L+S+M+E +I+ D+ Y+ +
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 130 SS-CESIEK--MEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK 186
C+ + +F +M + I PN T++ M + ++ A+ LR + R
Sbjct: 304 DRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 187 GRDRIPFHYLLSLYGGVGNKDEVYRVWST--YKSIFPTIPNLGYHAIVSSLIRIDDIEGA 244
D + F+ L+S G E ++ ++ IFP + Y++++ + + + A
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP--DTVTYNSMIYGFCKHNRFDDA 420
Query: 245 EKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEG 304
+ +++ + +S D N +I Y + +D+ + ++ G V N+ T+ L G
Sbjct: 421 KHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 305 YIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSA-FFKLCQDE 347
+ ++ A + F S P +T + + C++E
Sbjct: 477 FCEVDNLNAA----QDLFQEMISHGVCPDTITCNILLYGFCENE 516
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 45/253 (17%)
Query: 60 NVYVHY-----RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
N+ +H+ R+K+ A LL +M KGY + ++ ++ Y E DKV LI MK
Sbjct: 250 NIVIHFVCQLGRIKE-AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 115 EKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
K ++ + Y Y + I K+ E+ F +M + I+P+ ++T+ + K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDI 367
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
A ++ SR I P + L Y AI
Sbjct: 368 RAASKFFYEMHSR---------------------------------DITPDV--LTYTAI 392
Query: 232 VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
+S +I D+ A KL+ E D+ LI Y K ++ A HM G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 292 VPNSNTWELLSEG 304
PN T+ L +G
Sbjct: 453 SPNVVTYTTLIDG 465
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 126/279 (45%), Gaps = 28/279 (10%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHS------LPFNVMMTLYMNLKEYD 104
D T L+N Y KA + D R ++I + + + ++ + D
Sbjct: 420 DSVTFTELINGYC------KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 105 KVDMLISEMKEKNIRLDIYSYNIWLSS-CESIEKMEQV-----FEQMGKDPAIVPNWSTF 158
+ L+ EM + ++ +I++YN ++ C+S E V FE G + V T+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV----TY 529
Query: 159 STMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLS---LYGGVGNKDEVYRVWST 215
+T+ Y K + +KA++ L+++ + + F+ L++ L+G + + +++ W
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WML 588
Query: 216 YKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDN 275
K I P ++++V ++++ A +Y++ S D + L+ + K N
Sbjct: 589 AKGIAPNATT--FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 276 IDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
+ +A F+ M G + +T+ +L +G++ K+ EA
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 99/253 (39%), Gaps = 45/253 (17%)
Query: 60 NVYVHY-----RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
N+ +H+ R+K+ A LL +M KGY + ++ ++ Y E DKV LI MK
Sbjct: 250 NIVIHFVCQLGRIKE-AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 115 EKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
K ++ + Y Y + I K+ E+ F +M + I+P+ ++T+ + K
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ-GILPDTVVYTTLIDGFCKRGDI 367
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
A ++ SR I P + L Y AI
Sbjct: 368 RAASKFFYEMHSR---------------------------------DITPDV--LTYTAI 392
Query: 232 VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
+S +I D+ A KL+ E D+ LI Y K ++ A HM G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 292 VPNSNTWELLSEG 304
PN T+ L +G
Sbjct: 453 SPNVVTYTTLIDG 465
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 126/279 (45%), Gaps = 28/279 (10%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHS------LPFNVMMTLYMNLKEYD 104
D T L+N Y KA + D R ++I + + + ++ + D
Sbjct: 420 DSVTFTELINGYC------KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 105 KVDMLISEMKEKNIRLDIYSYNIWLSS-CESIEKMEQV-----FEQMGKDPAIVPNWSTF 158
+ L+ EM + ++ +I++YN ++ C+S E V FE G + V T+
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV----TY 529
Query: 159 STMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLS---LYGGVGNKDEVYRVWST 215
+T+ Y K + +KA++ L+++ + + F+ L++ L+G + + +++ W
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN-WML 588
Query: 216 YKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDN 275
K I P ++++V ++++ A +Y++ S D + L+ + K N
Sbjct: 589 AKGIAPNATT--FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646
Query: 276 IDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
+ +A F+ M G + +T+ +L +G++ K+ EA
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 110/247 (44%), Gaps = 8/247 (3%)
Query: 71 AESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLS 130
A+ L M KG + +N M+ + + + L+ +M E+ I D+ ++N +S
Sbjct: 315 AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 131 SCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKG 187
+ K+ E++ ++M I P+ T+++M + K N+F+ A+ + S
Sbjct: 375 ASVKEGKLFEAEKLCDEM-LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 188 RDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKL 247
D + F+ ++ +Y DE ++ Y+ ++ +D++ A+ L
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 248 YEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIA 307
++E +S D N+L+ + +N+ +++AL FE + ++ + ++ G
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 308 DKRVSEA 314
+V EA
Sbjct: 550 GSKVDEA 556
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 124/284 (43%), Gaps = 17/284 (5%)
Query: 70 KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL 129
+A +L++ M KG I + + ++ + + L+S+M+E +I+ D+ Y+ +
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 130 SS-CESIEK--MEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK 186
C+ + +F +M + I PN T++ M + ++ A+ LR + R
Sbjct: 304 DRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 187 GRDRIPFHYLLSLYGGVGNKDEVYRVWST--YKSIFPTIPNLGYHAIVSSLIRIDDIEGA 244
D + F+ L+S G E ++ ++ IFP + Y++++ + + + A
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD--TVTYNSMIYGFCKHNRFDDA 420
Query: 245 EKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEG 304
+ +++ + +S D N +I Y + +D+ + ++ G V N+ T+ L G
Sbjct: 421 KHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 305 YIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSA-FFKLCQDE 347
+ ++ A + F S P +T + + C++E
Sbjct: 477 FCEVDNLNAA----QDLFQEMISHGVCPDTITCNILLYGFCENE 516
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T SLLN + H A SL+ M GY S FN ++ + L+
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CES---------IEKMEQVFEQMGKDPAIVPNWSTFST 160
M K + D+ +Y I ++ C+ ++KMEQ GK I P ++T
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ-----GK---IEPGVVIYNT 261
Query: 161 MATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KS 218
+ A + +++++ + + ++ L+ G + R+ S +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 219 IFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDK 278
I P + + + A++ + ++ + AEKLY+E + D + LI + +D +D+
Sbjct: 322 INPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 379
Query: 279 ALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
A + FE M PN T+ L +G+ KRV E + ++
Sbjct: 380 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 144/328 (43%), Gaps = 11/328 (3%)
Query: 53 RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISE 112
R++ +LLN +V + K ESL + G + +NV++ + KE++K +
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 113 MKEKNIRLDIYSYNIWLSSCESIEKME---QVFEQMGKDPAIVPNWSTFSTMATIYIKMN 169
M ++ + D++SY+ ++ K++ ++F++M + + P+ + ++ + ++K
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEK 233
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFH-YLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGY 228
+ A + +L + H ++S G D+ ++W K Y
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+++ L +++ AE ++ E ++S D N ++G + + I ++L + M
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH 353
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQDE 347
SV N ++ +L +G + + ++ EA + A K + T F LC +
Sbjct: 354 KNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPA----KGYAADKTTYGIFIHGLCVNG 408
Query: 348 DDTASTEILIGLLRKSGFLENEAYASLI 375
+ ++ + G L+ AYAS+I
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASII 436
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 130/300 (43%), Gaps = 17/300 (5%)
Query: 26 LDLVAKVHGVSSAERFFLNLTDNLK-DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYV 84
+D + K + + A FL L D +K D RT L++ + R D A +++D+M+ +
Sbjct: 246 MDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 85 IHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQ 144
+ + + Y ++ +V+ ++ EM+E ++ +Y I + S+ K +QV E
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM---HSLGKSKQVAEA 362
Query: 145 MG-----KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSL 199
+G K+ VP+ +S++ I K +F+ A + + ++ RD + ++ ++S
Sbjct: 363 LGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Query: 200 YGGVGNKDEVYRVWSTY-----KSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSV 254
+ R+ +S P + Y ++ ++ L V
Sbjct: 423 ALHHSRDEMALRLLKRMEDEEGESCSPNVET--YAPLLKMCCHKKKMKLLGILLHHMVKN 480
Query: 255 RSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
S D LLI + +++A FFE G VP +T ++L + + K ++EA
Sbjct: 481 DVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDE-LEKKNMAEA 539
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T GSLLN + +A SL+D M G+V + + +N ++ ++ + + M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 114 KEKNIRLDIYSYNIWLSSCESIEK---MEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
++K IR D +YN +S + + ++ M K I PN F+ + ++K
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIFFTALIDTFVKEGN 269
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLS---LYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+A + +++ R + ++ L++ ++G +G+ ++ + + K FP + +
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS-KGCFPDV--VT 326
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y+ +++ + +E KL+ E DA N LI Y + ++ A F M
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEAL 315
D G P+ T+ +L + + ++ +AL
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKAL 414
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDML 109
D T SLLN Y H + +A +L+D M Y +++ FN ++ L+++ K + V L
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-AL 207
Query: 110 ISEMKEKNIRLDIYSYNIWLSS-CES---------IEKMEQVFEQMGKDPAIVPNWSTFS 159
I M + + D+++Y ++ C+ ++KME+ GK A V ++T
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK-----GKIEADVVIYTTII 262
Query: 160 TMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--K 217
Y +N A + +++++ + + ++ L+ G + R+ S +
Sbjct: 263 DALCNYKNVND---ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 218 SIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNID 277
I P + + + A++ + ++ + AEKLY+E + D + LI + +D +D
Sbjct: 320 KINPNV--VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 278 KALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
+A + FE M PN T+ L +G+ KRV E + ++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ SL+ +Y A LL M + + + F+ ++ ++ + + + L EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 114 KEKNIRLDIYSYNIWLSS-C--ESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYIKMN 169
+++I DI++Y+ ++ C + +++ + +FE M KD PN T++T+ + K
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYNTLIKGFCKAK 409
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYH 229
+ E+ + R++ R G VGN + Y+
Sbjct: 410 RVEEGMELFREMSQR----------------GLVGN-------------------TVTYN 434
Query: 230 AIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDG 289
++ L + D + A+K++++ VS D ++L+ K ++KAL FE++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 290 GSVPNSNTWELLSEGYIADKRVSEA 314
P+ T+ ++ EG +V +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDG 519
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 37/249 (14%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCE 133
D M+ G + FN ++ + ++ L EM + I D++SYN L +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 134 SIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRI 191
+M+ FE + + P I+PN ++ST+ + K +F++A + ++ DR+
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 192 PFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEW 251
++ LLS+Y VG +E A + E
Sbjct: 446 SYNTLLSIYTKVGRSEE-----------------------------------ALDILREM 470
Query: 252 VSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRV 311
SV D N L+G Y K D+ F M +PN T+ L +GY
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 312 SEALSCLKK 320
EA+ ++
Sbjct: 531 KEAMEIFRE 539
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 167/395 (42%), Gaps = 61/395 (15%)
Query: 4 VYDWMNNR---QERFRVSASDAAI----QLDLVAKVHGVSSAERFFLNLTDNLKDKRTHG 56
++D M NR Q+ F + AI Q+DL ++ +R N+ ++
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV-------SYS 413
Query: 57 SLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEK 116
++++ + D+A +L MR G + + +N ++++Y + ++ ++ EM
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 117 NIRLDIYSYNIWLSSCESIEK---MEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
I+ D+ +YN L K +++VF +M ++ ++PN T+ST+ Y K +++
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 174 AEDCLRKLESRIKGRDRIPFHYL---LSLYGGVGNK----DEVYRVWSTYKSIFPTIPNL 226
A + R+ +S D + + L L G VG+ DE+ T + I P + +
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-----TKEGISPNV--V 585
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIG----WYVKNDNIDKALNF 282
Y++I+ + R ++ RS+D + G+L + ++ +
Sbjct: 586 TYNSIIDAFGRSATMD------------RSADYSNGGSLPFSSSALSALTETEGNRVIQL 633
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK 342
F +T + N+ T + EG + LSC+ + F KP +T SA
Sbjct: 634 FGQLT---TESNNRTTKDCEEGM-------QELSCILEVFRKMHQLEIKPNVVTFSAILN 683
Query: 343 LCQDEDDTASTEILIGLLRKSGFLENEAYASLIGL 377
C + +L+ LR +N+ Y + GL
Sbjct: 684 ACSRCNSFEDASMLLEELR---LFDNKVYGVVHGL 715
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 107/250 (42%), Gaps = 2/250 (0%)
Query: 71 AESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLS 130
AE LL M KG+ + FN+++ + ++ +M + + + SYN L
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 131 SCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGR 188
+KM++ E + + P+ T++TM T K + E A + L +L S+
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 189 DRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLY 248
I ++ ++ G + ++ ++ + Y ++V L R ++ A K +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 249 EEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIAD 308
E+ + +A N ++ K+ D+A++F M + G PN ++ +L EG +
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 309 KRVSEALSCL 318
EAL L
Sbjct: 568 GMAKEALELL 577
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 39/303 (12%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + S+LN V R D +M S+G V + V+ Y K + L+
Sbjct: 163 DSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLL 222
Query: 111 SEMKEKNIRLDIYSYNIW-LSSCE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
EM I+ ++Y Y I+ L C +E+ E++FE M K ++PN T+S M Y K
Sbjct: 223 DEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKH-GVLPNLYTYSAMIDGYCK 281
Query: 168 MNQFEKAEDCLRKL----------------ESRIKGRDRIP------------------- 192
+A +++ + K R+ +
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 193 FHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWV 252
++ L+ + GN E + S +S+ + Y +++ L D + A +L+++
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 253 SVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVS 312
+ R + N LI Y K N+++AL+ MT G PN T+ L +GY + +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 313 EAL 315
A+
Sbjct: 462 AAM 464
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 140/325 (43%), Gaps = 21/325 (6%)
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYM-------NLKEYDKVDM-- 108
L NV V L D +++ ++ +H + F V LY+ + K + ++
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-C--ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L+SEM+ N+ D+++Y I ++ C + + + ++F++M K+ I P+ +T++++ Y
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNERIFPSSATYNSLIHGY 419
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVW--STYKSIFPTI 223
K E+A D ++ + + I F L+ Y V + ++ T K I P +
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 224 PNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFF 283
+ Y A++ + + +++ A +LY + + + L+ + K + A++F+
Sbjct: 480 --VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 284 EHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKL 343
+ S N + L EG + + A + F+ S P + + K
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRA----SRFFSDMRSCGITPDICSYVSMLKG 593
Query: 344 CQDEDDTASTEILIGLLRKSGFLEN 368
E T +L + K+G L N
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPN 618
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 135/331 (40%), Gaps = 44/331 (13%)
Query: 36 SSAERFFLNLTDNLKDK-----RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPF 90
S AE+F L+ ++ R +L V R+ +KA ++ + M G + + F
Sbjct: 182 SMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITF 241
Query: 91 NVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMG---- 146
N M+ + ++VD + EMK +NI +YNI ++ KME+ G
Sbjct: 242 NTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 147 KDPAIVP---------------------------NWSTFSTMAT--IYI-KMNQFEKAED 176
A+ P N + T +T IYI + F + +D
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361
Query: 177 CLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSS 234
R+L S + D + ++ L+ Y +G E ++ ++ I P+I + Y+ ++
Sbjct: 362 A-RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI--VTYNTLIDG 418
Query: 235 LIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPN 294
L ++EGA++L EE + D L+ +VKN N+ A ++ M G P+
Sbjct: 419 LCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 295 SNTWELLSEGYIADKRVSEALSCLKKAFATD 325
+ + G + +A ++ ATD
Sbjct: 479 GYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 161/360 (44%), Gaps = 38/360 (10%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + SL+ + D+ ++L D + +G ++ +N ++ + L + + +
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMG----KDPAIVPNWSTFSTMATIYI 166
M E+ +R ++Y+Y + + K ++ + + KD PN T++ +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE--PNAVTYNIIINKLC 363
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRV-WSTYKSIFPTIPN 225
K A + + ++ R D I ++ LL G+ DE ++ + K T P+
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 226 -LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
+ Y+A++ L + + + A +Y+ V + D N+L+ +K +++KA+ ++
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 285 HMTDGGSVPNSNTWELLSEGY------------IADKRVSEA------LSCLKKAFATDG 326
++D V NS+T+ + +G+ + RVSE +CL + +G
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 327 S--KSWKPKPLTLSAFFKLCQDED--DTASTEILIGLLRKSGFLENEAYASLIGLSDATI 382
S ++W+ F ++ +D + D S I+I K+G +++ A + L+G+S A +
Sbjct: 544 SLDQAWR-------LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS-AESLLVGMSRAGL 595
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 43/344 (12%)
Query: 46 TDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDK 105
TD + + LL YV R A +L +M +G+ + N+++ E K
Sbjct: 101 TDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK 160
Query: 106 VDMLISEMKEKNIRLDIYSYNIWLSS-CESIEKMEQVFEQMGKDPAIVPNWSTFSTMATI 164
L+ EM+ ++ D++SYN + CE E +E+ E + +WS + T
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE-LEKALELANEMKGSGCSWS----LVTW 215
Query: 165 YIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIP 224
I ++ F KA G DE K +
Sbjct: 216 GILIDAFCKA-----------------------------GKMDEAMGFLKEMKFMGLEAD 246
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
+ Y +++ +++ + L++E + S A N LI + K + +A FE
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF-KL 343
M + G PN T+ L +G + EAL L D +P +T + KL
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD----EEPNAVTYNIIINKL 362
Query: 344 CQDEDDTASTEILIGLLRKSGFLENEAYASLIGLSDATIGKGDL 387
C+D + EI+ + ++ +N Y L+G KGDL
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLG---GLCAKGDL 403
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKV-DML 109
D T+ LLN Y + +AE ++ M G + + +N ++ + + DK + +
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 110 ISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYI 166
+ EM+ + D+ SY+ + + C + K ++FE+M + +V N T++++ ++
Sbjct: 314 VKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEM-RQKGMVMNVVTYTSLIKAFL 371
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNL 226
+ A+ L ++ DRI + +L GN D+ Y V++ T +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHM 286
Y++++S L R + A KL+E+ D +IG ++ + A ++ M
Sbjct: 432 SYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Query: 287 TDGG 290
D G
Sbjct: 492 MDKG 495
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 37/269 (13%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW 128
+KAE+L M G + +NV++ Y + + + +++EM I+LD YSYN
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL 296
Query: 129 LSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGR 188
L + ++ + M K + E C
Sbjct: 297 LKRHCRVSHPDKCYNFMVK----------------------EMEPRGFC----------- 323
Query: 189 DRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLY 248
D + + L+ + N + YR++ + + + Y +++ + +R + A+KL
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 249 EEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIAD 308
++ + S D ++ K+ N+DKA F M + P++ ++ L G
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 309 KRVSEALSCLKKAFATDGSKSWKPKPLTL 337
RV+EA+ K F K P LT
Sbjct: 444 GRVTEAI----KLFEDMKGKECCPDELTF 468
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 4/288 (1%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ +L+N + L +KAE + + ++ G +N +M Y + S M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 114 KEKNIRLDIYSYNIWLSSCESI---EKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+ D SYNI + + E VFE+M K I P + + + Y K
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARD 419
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
K E ++++ D + +L+LYG +G ++ ++ + ++ T Y+
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 231 IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGG 290
+++ + +E E+L+ E D IG Y + K L FE M D G
Sbjct: 480 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Query: 291 SVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLS 338
P+ T ++L ++++V + S L+ S PK + S
Sbjct: 540 CAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKS 587
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 116/288 (40%), Gaps = 4/288 (1%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ +L+N + L +KAE + + ++ G +N +M Y + S M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 114 KEKNIRLDIYSYNIWLSSCESI---EKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+ D SYNI + + E VFE+M K I P + + + Y K
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARD 441
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
K E ++++ D + +L+LYG +G ++ ++ + ++ T Y+
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 231 IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGG 290
+++ + +E E+L+ E D IG Y + K L FE M D G
Sbjct: 502 LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Query: 291 SVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLS 338
P+ T ++L ++++V + S L+ S PK + S
Sbjct: 562 CAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLVPKLMAKS 609
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 137/332 (41%), Gaps = 68/332 (20%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + S++NVY +L +A L+ M G + +++ ++ ++++Y+ ++ + +
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 111 SEMKEKNIRLDIYSYNIWL---SSCESIEKMEQVF---EQMGKDPAIVP----------- 153
+EMKE N LD+ + NI + + +++ +++F +M +P +V
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 154 --------------------NWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPF 193
N T++TM IY K + EKA + +++++SR + I +
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 194 HYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEE--- 250
++S++G G D ++ +S I + Y ++ + R+ + A++L E
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 251 -----------------------WVSVRSSDDARLGNL-----LIGWYVKNDNIDKALNF 282
WV ++ + + ++ +I Y +N +
Sbjct: 499 PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
FE M G P+SN ++ Y + +A
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 150/335 (44%), Gaps = 14/335 (4%)
Query: 30 AKVHG---VSSAERFFLNLTDNLKDK-RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVI 85
K+H SS+ +L ++ K K R + ++N YV + + + S + M G+V
Sbjct: 68 GKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVP 127
Query: 86 HSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQM 145
S FN ++T + +++ +E K K + LD+YS+ I + C ++E+ F+ +
Sbjct: 128 GSNCFNYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLL 186
Query: 146 GK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGV 203
+ + PN ++T+ K + EKA+D ++ + + L++
Sbjct: 187 IELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKN 246
Query: 204 GNKDEVYRVWSTYK--SIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDAR 261
G K + + ++ + +FP + Y+ +++ L + + A ++++E S +
Sbjct: 247 GVKKQGFEMYEKMQEDGVFPNL--YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 262 LGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKA 321
N LIG + +++A + M G PN T+ L +G+ ++ +ALS +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 322 FATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEIL 356
+ S S + +S F C+ D + + +++
Sbjct: 365 KSRGLSPSLVTYNILVSGF---CRKGDTSGAAKMV 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 112/269 (41%), Gaps = 39/269 (14%)
Query: 49 LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDM 108
+ ++RT+ L+N +K + + + M+ G + +N +M
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-CESIEKME--QVFEQMGKDPAIVPNWSTFSTMATIY 165
+ EM+E+ + +I +YN + C ++ E +V +QM D I PN T++T+ +
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGF 348
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN 225
+ + KA R L+SR + P++
Sbjct: 349 CGVGKLGKALSLCRDLKSR---------------------------------GLSPSL-- 373
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y+ +VS R D GA K+ +E +LI + ++DN++KA+
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEA 314
M + G VP+ +T+ +L G+ +++EA
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 118/282 (41%), Gaps = 43/282 (15%)
Query: 75 LDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL----- 129
LD+MR +G + + +N ++ + + D L M+ ++ Y+Y +++
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 130 -----SSCESIEKME----------------------------QVFEQMGKDPAIVPNWS 156
S+ E+ EKM+ Q+F + KD +VP+
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSV 504
Query: 157 TFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY 216
T++ M Y K+ + ++A L ++ D I + L++ DE ++++
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 217 KS--IFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKND 274
K + PT+ + Y+ +++ L + I+ A +L+E V + N L KND
Sbjct: 565 KEMKLKPTV--VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 275 NIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
+ AL M D G VP+ T+ + G + + +V EA+
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 3/193 (1%)
Query: 131 SCE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGR 188
SC+ ++ +FE+ KD + P T++ + ++ + E A+D +++S
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 189 DRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLY 248
D +++LL YG G DE++ ++ + + ++ ++S L++ +++ A LY
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 249 EEWVSVRS-SDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIA 307
+ +S R S A LI K+ + +A FE M D G PN + +L G+
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 308 DKRVSEALSCLKK 320
A + K+
Sbjct: 939 AGEADAACALFKR 951
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 7/287 (2%)
Query: 35 VSSAERFFLNLTDNL--KDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNV 92
V SAER F + D T+ +++ Y KA L M ++G+ + +
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 93 MMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDP 149
M+ ++ L EM EK I++ +++++ + K+ + VFE M +
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 150 AIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEV 209
+ PN + ++ + Y K E A L ++ D + + +++ G +E
Sbjct: 358 S-KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 210 YRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGW 269
+ T + I ++ Y +++ L + ++ AE+L+EE + D+ N LI
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 270 YVKNDNIDKALNFFEHM-TDGGSVPNSNTWELLSEGYIADKRVSEAL 315
+ K+ +D+A+ F+ M + G T+ +L G + R EAL
Sbjct: 477 FTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 95/239 (39%), Gaps = 44/239 (18%)
Query: 112 EMKEKNIRLDIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKM 168
+MKE I +Y+YN ++ S ++ E+VFE M + I P+ T++TM Y K
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM-ESGRIKPDIVTYNTMIKGYCKA 270
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGY 228
Q +KA + LR +E+R D+I Y
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKIT-----------------------------------Y 295
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
++ + D LY+E +L+IG K +++ FE+M
Sbjct: 296 MTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIR 355
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQD 346
GS PN + +L +GY V +A+ L + + +KP +T S LC++
Sbjct: 356 KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI----DEGFKPDVVTYSVVVNGLCKN 410
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 55 HGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
+ ++++ YR +D A +L M +KG + + ++ +++ N + L+S+M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 115 EKNIRLDIYSYNIWLSSC---ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
E+ I ++ +++ + + + K E+++E+M K +I PN T+S++ + +++
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR-SIDPNIFTYSSLINGFCMLDRL 374
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKD---EVYRVWSTYKSIFPTIPNLGY 228
+A+ L + + + + ++ L++ + D E++R S + T+ Y
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT---Y 431
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
++ + D + A+ ++++ VSV + N+L+ KN + KA+ FE++
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 289 GGSVPNSNTWELLSEG 304
P+ T+ ++ EG
Sbjct: 492 STMEPDIYTYNIMIEG 507
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM-TLYMNLKEYDKVDML 109
D T SLLN + H A +L+D M GY ++ F ++ L+++ K + V L
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV-AL 205
Query: 110 ISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPA--IVPNWSTFSTMATIYIK 167
I M ++ + D+ +Y ++ + + K A I N +ST+ K
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPN 225
+ A + ++E++ + I + L+S G + R+ S + I P +
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL-- 323
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ + A++ + ++ + AEKLYEE + + + LI + D + +A E
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
M +PN T+ L G+ KRV + +
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 141/332 (42%), Gaps = 15/332 (4%)
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
LLN V RL D + M G V + +NV++ + +K + L+SEM+EK
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 118 IRLDIYSYNIWLSS-CESIEKMEQVFEQ-MGKDPAIVPNWSTFSTMATIYIKMNQFEKAE 175
+ DI++YN +S C+ E + Q + + PN T+++ + + + +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 176 DCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSL 235
R+++ + + + + L+ Y + + DE R+ +S + + Y++I+ L
Sbjct: 294 RLFREIKDDVTA-NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 236 IRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
I A +L E + D N LI Y K +++ A+ + M + G +
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 296 NTWELLSEGYIA----DKRVSEALSCLKKAFATD-GSKSW-------KPKPLTLSAFFKL 343
+++ L G+ + E S ++K F+ + SW + K ++ +
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 344 CQDEDDTASTEILIGLLRKSGFLENEAYASLI 375
+ A + GL+R+ LE YA ++
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 32/323 (9%)
Query: 60 NVYVHYRLKD---------KAESL-LDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDML 109
NVY H L D KA L L ++RS Y + + M+ Y + ++ +ML
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 110 ISEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYI 166
S MKE+ + ++ +Y ++ C+ S + ++ MG D +PN T++
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG-DEGFMPNIYTYNAAIDSLC 439
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNL 226
K ++ +A + L K S D + + L+ + ++ + F +
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL-------AFFCRMNKT 492
Query: 227 GYHA-------IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKA 279
G+ A ++++ R ++ +E+L++ VS+ +I Y K +ID A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 280 LNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSA 339
L +F +M G VP+S T+ L G V EA L +A G + +TL+
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK-LYEAMIDRGLSPPEVTRVTLA- 610
Query: 340 FFKLCQDEDDTASTEILIGLLRK 362
++ C+ +D+A+ IL+ L K
Sbjct: 611 -YEYCK-RNDSANAMILLEPLDK 631
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 126/270 (46%), Gaps = 10/270 (3%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + ++++ YR D A +L M +KG ++ +++ N + L+
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
S+M E+ I ++ ++N + + K+ E++F++M + +I PN T++++ +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCM 357
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGG---VGNKDEVYRVWSTYKSIFPTIP 224
++ ++A+ + S+ D + ++ L++ + V + E++R S + T+
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
Y ++ + D + A+ ++++ VS + N L+ KN ++KA+ FE
Sbjct: 418 ---YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
++ P+ T+ ++SEG +V +
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 47 DNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKV 106
D L D T+ +L+N + + L M +G V +++ + ++ + + D
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 107 DMLISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMAT 163
M+ +M + +I +YN L C++ +EK VFE + K + P+ T++ M+
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSE 493
Query: 164 IYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTI 223
K + E D L + D I ++ ++S + G K+E Y ++ K P +
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP-L 552
Query: 224 PNLG-YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDA 260
P+ G Y+ ++ + +R D + +L +E S R + DA
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 116/270 (42%), Gaps = 14/270 (5%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVD---MLI 110
T SLLN + H +A +L+D M GY ++ F TL L +++K L+
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT---TLVHGLFQHNKASEAVALV 193
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CESIEK--MEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
M K + D+ +Y ++ C+ E + +M K I + +ST+ K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYSTVIDSLCK 252
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPN 225
+ A + +++++ D + L+S G + R+ S + I P +
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV-- 310
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ +++++ + + + AEKL++E + + N LI + +D +D+A F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
M +P+ T+ L G+ K+V + +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 138/335 (41%), Gaps = 31/335 (9%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D RT +LL+ D+A + + +G V+ + +N +++ K+ D+ M +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFE--QMGKDPAIVPNWSTFSTMATIYIKM 168
EM ++ ++ D Y+Y+I + ++ K+E+ + K ++P+ T+S M K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPNL 226
+ E+ ++ ++ S+ + + +++L+ Y G + +K I P +
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN--SA 681
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHM 286
Y +++ + I +E A+ L+EE + LI Y K + K M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 287 TDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD 346
PN T+ ++ GY D V+EA L + K P +T F
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM----REKGIVPDSITYKEF------ 791
Query: 347 EDDTASTEILIGLLRKSGFLE------NEAYASLI 375
+ G L++ G LE E YA++I
Sbjct: 792 ---------IYGYLKQGGVLEAFKGSDEENYAAII 817
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 138/335 (41%), Gaps = 31/335 (9%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D RT +LL+ D+A + + +G V+ + +N +++ K+ D+ M +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFE--QMGKDPAIVPNWSTFSTMATIYIKM 168
EM ++ ++ D Y+Y+I + ++ K+E+ + K ++P+ T+S M K
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPNL 226
+ E+ ++ ++ S+ + + +++L+ Y G + +K I P +
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN--SA 681
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHM 286
Y +++ + I +E A+ L+EE + LI Y K + K M
Sbjct: 682 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 287 TDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD 346
PN T+ ++ GY D V+EA L + K P +T F
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM----REKGIVPDSITYKEF------ 791
Query: 347 EDDTASTEILIGLLRKSGFLE------NEAYASLI 375
+ G L++ G LE E YA++I
Sbjct: 792 ---------IYGYLKQGGVLEAFKGSDEENYAAII 817
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 107/265 (40%), Gaps = 41/265 (15%)
Query: 90 FNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGK-- 147
F+ +++ +K+YD V L +M+ I ++ + NI L+ ++ +GK
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 148 ----DPAIV-------------------------------PNWSTFSTMATIYIKMNQFE 172
+P+IV PN ++T+ K Q +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 173 KAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPNLGYHA 230
A D L ++E G D + ++ L+S G + R+ S T + I+P + ++A
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV--FTFNA 261
Query: 231 IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGG 290
++ + ++ + AE+ YEE + D +LLI +D+A F M G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 291 SVPNSNTWELLSEGYIADKRVSEAL 315
P+ T+ +L GY K+V +
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGM 346
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T GSLLN + A + D M GY + + +N ++ K+ D L++ M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 114 KEKNIRLDIYSYNIWLSS-CESIE--KMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
++ I D+ +YN +S C S ++ M K I P+ TF+ + +K +
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGR 271
Query: 171 FEKAEDCLRKLESRIKGRDRIPFH---YLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+AE+ ++ R D + + Y L +Y + +E++ + K FP + +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG-FMVSKGCFPDV--VT 328
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y +++ + +E KL+ E + +LI Y + ++ A F M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEAL 315
G PN T+ +L G + ++ +AL
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKAL 416
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 16/282 (5%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVD---MLI 110
T SLLN + H +A +L+D M GY ++ F TL L +++K L+
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT---TLVHGLFQHNKASEAVALV 203
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CESIEK--MEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
M K + D+ +Y ++ C+ E + +M K I + ++T+ K
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG-KIEADVVIYNTIIDGLCK 262
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY--KSIFPTIPN 225
+ A D K+E++ D ++ L+S G + R+ S K+I P +
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL-- 320
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSS-DDARLGNLLIGWYVKNDNIDKALNFFE 284
+ ++A++ + ++ + AEKLY+E V + D N LI + K +++ + F
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDG 326
M+ G V N+ T+ L G+ + A K+ +DG
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ-MVSDG 421
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 142/346 (41%), Gaps = 16/346 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + ++++ Y+ D A L + M +KG +N +++ N + L+
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
S+M EKNI D+ +N + + K+ E+++++M K P+ ++T+ + K
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPN 225
+ E+ + R++ R + + + L+ + + D V+ S + P I
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI-- 426
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y+ ++ L ++E A ++E D +I K ++ + F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKL-C 344
++ G PN T+ + G+ K + E L DG P T + +
Sbjct: 487 LSLKGVKPNVVTYTTMMSGF-CRKGLKEEADALFVEMKEDGP---LPNSGTYNTLIRARL 542
Query: 345 QDEDDTASTEILIGLLRKSGFLENEAYASLIGLSDATIGKGDLSRT 390
+D D+ AS E LI +R GF + AS GL + G L ++
Sbjct: 543 RDGDEAASAE-LIKEMRSCGFAGD---ASTFGLVTNMLHDGRLDKS 584
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 134/343 (39%), Gaps = 55/343 (16%)
Query: 26 LDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVI 85
+D+ AK +S A R F + D + L + YV L ++A + + MR +G+
Sbjct: 202 VDMYAKCDRISDARRVFEWIVD--PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 86 HSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-----CESI----- 135
L F ++ Y+ L + +L EM D+ ++N+ +S CE++
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSP----DVVAWNVMISGHGKRGCETVAIEYF 315
Query: 136 ------------EKMEQVFEQMGKDP---------------AIVPNWSTFSTMATIYIKM 168
+ V +G + N S++ ++Y K
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGY 228
+ E A LE + + + ++ ++ Y G +V ++ KS I + +
Sbjct: 376 EKMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+++S+ D+E + + + + + + +GN L+ Y K ++ A FE M D
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKK----AFATDGS 327
+V TW + Y+ D+ SEA K+ +DG+
Sbjct: 492 RDNV----TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 110/260 (42%), Gaps = 20/260 (7%)
Query: 140 QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSL 199
QV+ M + I PN TF+ + ++ + F + +D L K+E D + ++ L+S
Sbjct: 222 QVYSVMCR-VGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSS 280
Query: 200 YGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSS 257
Y G E + ++ + + P + + Y +++ L + + A + + V
Sbjct: 281 YCRRGRLKEAFYLYKIMYRRRVVPDL--VTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 258 DDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSC 317
D N LI Y K + ++ M VP+ T +++ EG++ + R+ A++
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN- 397
Query: 318 LKKAFATDGSKSWKPKPLTLSAFF--KLCQDEDDTASTEILIGLLRKSGF-LENEAYASL 374
F + + P + F LCQ+ A+ +L ++ + G + E Y +L
Sbjct: 398 ----FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNL 453
Query: 375 I-------GLSDATIGKGDL 387
I + +A + KG L
Sbjct: 454 IESLSRCDAIEEALVLKGKL 473
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 132/306 (43%), Gaps = 10/306 (3%)
Query: 46 TDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDK 105
T+ L D T+ L+N + + L+D M+S + +N ++ L +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 106 VDMLISEMKEKNIRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMA 162
L+ +M+ ++ + ++NI WL E E + + +++ P+ T+ T+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 163 TIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVW-STYKSIFP 221
Y+K+ A + +R++ + + I + +L DE + + S +K F
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF- 482
Query: 222 TIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALN 281
+ + Y ++ R + +E A ++++E V+ + N LIG + + A+
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 282 FFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF 341
F+ + + G +P+ +T+ + GY + RV +A ++ S+KP T +
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI----KHSFKPDNYTCNILL 598
Query: 342 K-LCQD 346
LC++
Sbjct: 599 NGLCKE 604
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 66 RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSY 125
RL D E LLD M+ G V + + +N ++ Y L + ++ MK+ N+ D+ +Y
Sbjct: 255 RLSDLKELLLD-MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 126 NIWLSSCESIEKMEQVFEQMG--KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLES 183
NI ++ + M + E M K + P+ T++T+ ++ +A + ++E+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 184 RIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNL-GYHAIVSSLIRIDDIE 242
+++ + L ++ V R + P++ YH ++ + +++ D+
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 243 GAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLS 302
GA ++ E + N ++ K +D+A N G + + T+ L
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 303 EGYIADKRVSEAL 315
G+ +++V +AL
Sbjct: 494 MGFFREEKVEKAL 506
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 15/255 (5%)
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L+ +M+E+NI+LD Y+I + C+ S++ +F +M + I N T++ + +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGF 308
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY---GGVGNKDEVYRVWSTYKSIFPT 222
+++ LR + R + + F L+ + G + +E+++ ++ I P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPD 367
Query: 223 IPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
+ Y +++ + + ++ A ++ + VS + R N+LI Y K + ID L
Sbjct: 368 --TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK 342
F M+ G V ++ T+ L +G+ +++ A K+ F S+ P +T
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVA----KELFQEMVSRKVPPNIVTYKILLD 481
Query: 343 -LCQDEDDTASTEIL 356
LC + + + EI
Sbjct: 482 GLCDNGESEKALEIF 496
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 122/280 (43%), Gaps = 22/280 (7%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ SL++ + DKA ++D+M SKG + FN+++ Y D L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
+M + + D +YN + CE + +++F++M + PN T+ +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM-VSRKVPPNIVTYKILLDGLCD 485
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY-----KSIFPT 222
+ EKA + K+E D ++ ++ G+ N +V W + K + P
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIH---GMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 223 IPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
+ Y+ ++ L + + AE L+ + + D N+LI ++ + + K++
Sbjct: 543 VKT--YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAF 322
E + G +++T +++ + ++D R LKK+F
Sbjct: 601 IEELKRCGFSVDASTIKMVID-MLSDGR-------LKKSF 632
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T L++ +V +A+ LL M +G +++ +N ++ + ++ ++ M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 114 KEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
K DI ++NI ++ C++ I+ ++F +M ++ N T++T+ + + +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL-RGVIANTVTYNTLVQGFCQSGK 453
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG--- 227
E A+ +++ SR D + + LL G+ + E+ + + I + L
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLD---GLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y I+ + ++ A L+ DAR N++I + D++ KA F MT
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEA 314
+ G P+ T+ +L ++ D + A
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTA 597
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 14/299 (4%)
Query: 71 AESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLS 130
A L+D M G+ + + + ++ + + L+ +M+E+NI+LD Y+I +
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 131 S-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKG 187
C+ S++ +F +M + + T++T+ + +++ LR + R
Sbjct: 272 GLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 188 RDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPNLGYHAIVSSLIRIDDIEGAE 245
+ + F L+ + G E ++ + I P + Y++++ + + +E A
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN--TITYNSLIDGFCKENRLEEAI 388
Query: 246 KLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGY 305
++ + +S D N+LI Y K + ID L F M+ G + N+ T+ L +G+
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 306 IADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQDEDDTASTEILIGLLRKS 363
++ A KK F S+ +P ++ LC + + + EI G + KS
Sbjct: 449 CQSGKLEVA----KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF-GKIEKS 502
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 117/305 (38%), Gaps = 43/305 (14%)
Query: 47 DNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKV 106
D D T+ L+N K+ A LD KG + ++L + ++ Y KEYD
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 107 DMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATI 164
L+ +M E+ + DI +Y I + M+ K D + P+ + ++ + +
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 165 YIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIP 224
K +F A + L S + R+ +P Y+
Sbjct: 460 LCKTGRFLPA----KLLFSEMLDRNILPDAYV---------------------------- 487
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
Y ++ IR D + A K++ V D N +I + ++ +D+AL
Sbjct: 488 ---YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-- 342
M + VP+ T+ + +GY+ + ++ A+ K F KP +T ++
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAI----KIFRYMEKNKCKPNVVTYTSLINGF 600
Query: 343 LCQDE 347
CQ +
Sbjct: 601 CCQGD 605
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 141/337 (41%), Gaps = 8/337 (2%)
Query: 55 HGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMK 114
+ +L+ V ++ DKA + M G + +++++ L + + ++D ++ E+
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EIS 366
Query: 115 EKNIRLDIYSYNI-WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
++ + IYSY + LS + + ++F M P S S + ++ E
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVS 233
E L K+ + D + ++ + S G + ++ ++ K P+ Y+ +++
Sbjct: 427 IE-MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIA 485
Query: 234 SLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVP 293
S R+ +++ A ++EE D N LI KN ++D+A F+ M + G P
Sbjct: 486 SFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNP 545
Query: 294 NSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTAST 353
+ T+ L E + +RV A S ++ K +P +T + + TA
Sbjct: 546 DVVTYSTLMECFGKTERVEMAYSLFEEMLV----KGCQPNIVTYNILLDCLEKNGRTAEA 601
Query: 354 EILIGLLRKSGFLENE-AYASLIGLSDATIGKGDLSR 389
L +++ G + Y L L + GK + R
Sbjct: 602 VDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRR 638
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 12/276 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D+ T+ L++ YV+ + A +L M + +S F+ ++ + + E+ K ++
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL 432
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIK 167
EMK ++ D YN+ + + ++ F++M + I P+ T++T+ + K
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE-GIEPDRVTWNTLIDCHCK 491
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+ AE+ +E R ++ +++ YG D++ R+ KS +PN+
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQ-GILPNVV 550
Query: 228 YHAIVSSLI----RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFF 283
H + + R +D A + EE SV + + N LI Y + ++A+N F
Sbjct: 551 THTTLVDVYGKSGRFND---AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 284 EHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLK 319
MT G P+ L + D+R +EA + L+
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 155/375 (41%), Gaps = 25/375 (6%)
Query: 19 ASDAAIQLDLVAKVHGVSSAERFFLNLTDNLK-DKRTHGSLLNVYVHYRLKDKAESLLDI 77
+ D ++ LDL+ K+ ER N+K D T+ ++++ D A SL
Sbjct: 206 SGDTSLALDLLRKME-----ER-------NVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 78 MRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEK 137
M +KG + +N ++ +++ +L+ +M + I ++ ++N+ L K
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 138 MEQVFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHY 195
+++ E + I PN T++T+ Y N+ +A + L + D + F
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 196 LLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVR 255
L+ Y V D+ +V+ + Y +V + I+ AE+L++E VS
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 256 SSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
D +L+ N ++KAL FE + + + EG +V +A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 316 SCLKKAFATDGSKSWKPKPLTLSAFFK-LCQDEDDTASTEILIGLLRKSGFLENEA-YAS 373
+ F + K KP +T + LC+ + + IL+ + + G N+ Y +
Sbjct: 494 N----LFCSLPCKGVKPNVMTYTVMISGLCK-KGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 374 LIGLSDATIGKGDLS 388
LI A + GDL+
Sbjct: 549 LI---RAHLRDGDLT 560
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Query: 53 RTHGSLLNVYVHY-RLKDKAESLLDIMRSKGYVIHS--LPFNVMMTLYMNLKEYDKVDML 109
RT G ++ Y R++D L + R K + + + FN ++ ++ + + D +D +
Sbjct: 261 RTCGIVVGGYCREGRVRD---GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 110 ISEMKEKNIRLDIYSY----NIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
++ MKE N++ D+ +Y N W SS +EK QVF++M K + P+ +S +A Y
Sbjct: 318 LTLMKECNVKADVITYSTVMNAW-SSAGYMEKAAQVFKEMVK-AGVKPDAHAYSILAKGY 375
Query: 166 IKMNQFEKAEDCLRKL--ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTI 223
++ + +KAE+ L L ESR + + F ++S + G+ D+ RV++ F
Sbjct: 376 VRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNGSMDDAMRVFNKM-CKFGVS 431
Query: 224 PNL 226
PN+
Sbjct: 432 PNI 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 126/300 (42%), Gaps = 45/300 (15%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYV---IHSLPFNVMMTLYMNLKEYDKVDMLI 110
T+ +L+ Y +++ LLD+M +G V + FNV++ + K+ ++ ++
Sbjct: 152 TYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVV 211
Query: 111 SEMKEKNIRLDIYSYNIWLSSC-----ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
+M+E +R D +YN +++C E++ +V E+M PN T + Y
Sbjct: 212 KKMEECGVRPDTVTYNT-IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGY 270
Query: 166 IKMNQFEKAEDCLRKL-ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIP 224
+ + +R++ E R++ + + F+ L++ + V ++D + V + K
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEA-NLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKAD 329
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVK------------ 272
+ Y ++++ +E A ++++E V DA ++L YV+
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 389
Query: 273 ----------------------NDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKR 310
N ++D A+ F M G PN T+E L GY+ K+
Sbjct: 390 TLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 449
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 112/253 (44%), Gaps = 5/253 (1%)
Query: 46 TDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDK 105
T + D+ T+ ++L+VY ++ SL + + G+ ++ F+V+ ++ +YD
Sbjct: 250 TGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 106 VDMLISEMKEKNIRLDIYSYNIWLSSCESIEK---MEQVFEQMGKDPAIVPNWSTFSTMA 162
+ ++ EMK +++ ++ YN L + K +F +M + + PN T + +
Sbjct: 310 IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM-LEAGLTPNEKTLTALV 368
Query: 163 TIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPT 222
IY K A +++++ D I ++ LL++ +G ++E R+++ K
Sbjct: 369 KIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQC 428
Query: 223 IP-NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALN 281
P N Y A+++ E A +L+EE + + L+ K ID +
Sbjct: 429 RPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVY 488
Query: 282 FFEHMTDGGSVPN 294
F+ G P+
Sbjct: 489 VFDLSIKRGVKPD 501
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 119/270 (44%), Gaps = 12/270 (4%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ SL+ Y L ++AE + ++++ K V + V+M Y + + M
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM 357
Query: 114 KEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
E +R + N ++ C+S + + EQ+F +M D ++ P+ T++T+ Y +
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGY 416
Query: 171 FEKAEDCLRKLESRIKGRDRIP----FHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNL 226
++A KL ++ ++ +P ++ LL Y +G +V +W +
Sbjct: 417 VDEA----LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEI 472
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHM 286
++ +L ++ D A KL+E ++ D N++I K + +++A +++
Sbjct: 473 SCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 287 TDGGSVPNSNTWELLSEGYIADKRVSEALS 316
P T++ LS GY + EA +
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 24/258 (9%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVD---MLI 110
T+G+L+ + + + DKA + M KG +L N+ + +L DK+D +L+
Sbjct: 613 TYGALITGWCNIGMIDKAYATCFEMIEKGI---TLNVNICSKIANSLFRLDKIDEACLLL 669
Query: 111 SEMKEKNIRLDIY-SYNIWL----SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
++ + ++ L Y S +L ++C +K+ + E +VPN ++
Sbjct: 670 QKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGL 729
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDR-IP--FHYLLSLYG----GVGNKDEVYRVWSTYKS 218
K + E A RKL S + DR IP + Y + ++G G NK R K
Sbjct: 730 CKAGKLEDA----RKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKG 785
Query: 219 IFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDK 278
I P I + Y+A++ L ++ +++ A++L + + +A N LI VK+ N+ +
Sbjct: 786 IIPNI--VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Query: 279 ALNFFEHMTDGGSVPNSN 296
A+ E M + G V S+
Sbjct: 844 AMRLKEKMIEKGLVRGSD 861
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 34/280 (12%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ SL++ Y + +D A +L M + + + M+ + + D+ L+ M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 114 KEKNIRLDIYSYNIWLSSCESIEKME---QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+EK + ++ +Y + I K+E ++ E+MG + PN+ T+ + K
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGA 829
Query: 171 FEKAEDCLRKLESR------------IKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS 218
+ A + L +++ I+G ++ F L L +G D
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK-EFIESLGLLDEIGQDD----------- 877
Query: 219 IFPTIPNLG-YHAIVSSLIRIDDIEGAEKLYEEWVSVRSS--DDARLGNLLIGWYVKNDN 275
T P L Y ++ +LI+ +E A +L EE + ++ D + N LI +
Sbjct: 878 ---TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 276 IDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
++ A F MT G +P ++ L +G + ++SEAL
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 109 LISEMKEKNIRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L M+ I DI N+ L C IE + F + + + P+ T++TM Y
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGY 617
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN 225
+ + ++AE L+ G + + L+ + + D R++S
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y ++ + DIEG+ KL+EE S +++I K +D+A N F
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEA 314
D +P+ + +L GY R+ EA
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 2 LQVYDWMNNRQERFRVSASDAA--IQLDLVAKVHGVSSAERFFLNLTDNL--KDKRTHGS 57
LQ++D M +R ++SA A + + L+ K H + A +FF NL + D T+ +
Sbjct: 557 LQLFDLM----QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
++ Y R D+AE + ++++ + +++ +++ + + D + S M EK
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 118 IRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
+ + +Y W S IE ++FE+M ++ I P+ ++S + K + ++A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVG 204
+ + D + + L+ Y VG
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVG 761
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 128/299 (42%), Gaps = 18/299 (6%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D + +L+N + D A +LD MRSK + ++ +N+M+ + + D ++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 111 SEMKEKNIRLDIYSYNIWLSSC-------ESIEKMEQVFEQMGKDPAIVPNWSTFSTMAT 163
+++ N + + +Y I + + E+++ M+++ + + P+ T++T+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR-----GLKPDMFTYNTIIR 271
Query: 164 IYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTI 223
K ++A + +R LE + D I ++ LL G +E ++ + S
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS-EKCD 330
Query: 224 PN-LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
PN + Y ++++L R IE A L + + DA + LI + + +D A+ F
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF 341
E M G +P+ + + + + +AL + F G P + + F
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQAL----EIFGKLGEVGCSPNSSSYNTMF 445
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 37/238 (15%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW 128
++A +LL +M+ KG + ++ ++ + D + M DI +YN
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 129 LSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK 186
L++ K +Q E GK + PN S+++TM + + D +R L
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM------FSALWSSGDKIRAL----- 458
Query: 187 GRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEK 246
H +L + + DE+ Y++++S L R ++ A +
Sbjct: 459 -------HMILEMMSNGIDPDEIT-----------------YNSMISCLCREGMVDEAFE 494
Query: 247 LYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEG 304
L + S N+++ + K I+ A+N E M G PN T+ +L EG
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 4/209 (1%)
Query: 109 LISEMKEKNIRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L M+ I DI N+ L C IE + F + + + P+ T++TM Y
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IEGKMEPDIVTYNTMICGY 646
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN 225
+ + ++AE L+ G + + L+ + + D R++S
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 226 LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEH 285
+ Y ++ + DIEG+ KL+EE S +++I K +D+A N F
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 286 MTDGGSVPNSNTWELLSEGYIADKRVSEA 314
D +P+ + +L GY R+ EA
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 2 LQVYDWMNNRQERFRVSASDAA--IQLDLVAKVHGVSSAERFFLNLTDNL--KDKRTHGS 57
LQ++D M +R ++SA A + + L+ K H + A +FF NL + D T+ +
Sbjct: 586 LQLFDLM----QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
++ Y R D+AE + ++++ + +++ +++ + + D + S M EK
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 118 IRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKA 174
+ + +Y W S IE ++FE+M ++ I P+ ++S + K + ++A
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 175 EDCLRKLESRIKGRDRIPFHYLLSLYGGVG 204
+ + D + + L+ Y VG
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/363 (17%), Positives = 145/363 (39%), Gaps = 49/363 (13%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+G+++ D A +++ M + G + + + ++ ++ + ++ EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 114 KEKNIRLDIYSYN---IWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
KE+ I DI+ YN I LS + +++ +M ++ + PN T+ + YI+ ++
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGYIEASE 537
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS------------ 218
F A+ ++++ +++ L++ Y K +V S Y+S
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYC---KKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 219 -------------------IFPTIPNLG-------YHAIVSSLIRIDDIEGAEKLYEEWV 252
IF + G Y +++ ++ +++ A +++E V
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 253 SVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVS 312
+ + + N+L+G + ++ I+KA + M+ G PN+ T+ + +GY ++
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 313 EALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSGFLENEAYA 372
EA + F K P + C +D + G +K +
Sbjct: 715 EAF----RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 373 SLI 375
+LI
Sbjct: 771 ALI 773
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 108/251 (43%), Gaps = 8/251 (3%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW 128
+KA++L D M + G + + + ++ Y K + L+ EMK++NI + Y+Y
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTV 423
Query: 129 LSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRI 185
+ C S ++ + ++M PN ++T+ +++ ++F A L++++ +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEM-IASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 186 KGRDRIPFHYLLSLYGGVGNKDEV--YRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEG 243
D ++ L+ DE + V + P Y A +S I +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA--FTYGAFISGYIEASEFAS 540
Query: 244 AEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSE 303
A+K +E + L LI Y K + +A + + M D G + ++ T+ +L
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 304 GYIADKRVSEA 314
G + +V +A
Sbjct: 601 GLFKNDKVDDA 611
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 193 FHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG-YHAIVSSLIRIDDIEGAEKLYEEW 251
F + Y D + T K + PN+G Y+ +V+ ++ D++ A + Y+
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 252 VSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRV 311
R+ D N+LI Y ++ D AL+ F M + G PN ++ L G+++ ++
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 312 SEAL 315
E +
Sbjct: 280 EEGV 283
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 121/268 (45%), Gaps = 10/268 (3%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T GSLL+ + A SL+ +M GY + + +N ++ E + L++EM
Sbjct: 143 TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
Query: 114 KEKNIRLDIYSYNIWLSS-CESIE--KMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
++K + D+ +YN L+ C S ++ M K +I P+ TF+ + +++K
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR-SINPDVVTFTALIDVFVKQGN 261
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYL---LSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
++A++ +++ + + ++ + L ++G + + + + + ++ K FP + +
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS-KGCFPNV--VT 318
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y+ ++S + ++ KL++ + D N LI Y + + AL+ F M
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEAL 315
P+ T +L G + + AL
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESAL 406
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 4/268 (1%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D+ T GSL+N + A SL+D M GY + +N ++ K +
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 111 SEMKEKNIRLDIYSYNIWLSS-CESIE--KMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
E++ K IR ++ +Y ++ C S ++ M K I PN T+S + ++K
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLDAFVK 272
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
+ +A++ ++ D + + L++ DE +++ S +
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 228 YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMT 287
Y+ +++ + +E KL+ E + N LI + + ++DKA FF M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 288 DGGSVPNSNTWELLSEGYIADKRVSEAL 315
G P+ T+ +L G + + +AL
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKAL 420
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 66 RLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSY 125
+L D + D+++S+ + + FN +++ + LK+YD V L +M+ IR D+Y++
Sbjct: 65 KLNDAIDLFSDMVKSRPFP-SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 126 NIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLES 183
NI ++ ++ +GK P+ T ++ + + N+ A + K+
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 184 RIKGRDRIPFHYLL--------------------------------SLYGGVGNK---DE 208
D + ++ ++ +L G+ N +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 209 VYRVWSTY--KSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLL 266
R+ S K I P + + Y A++ + ++ + A++L+EE V + D + L
Sbjct: 244 AARLLSDMIKKKITPNV--ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 267 IGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
I +D ID+A F+ M G + + ++ L G+ KRV + +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 122/283 (43%), Gaps = 9/283 (3%)
Query: 62 YVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKE-YDKVDMLISEMKEKNIRL 120
Y L DKA S++ + ++ G++ L +N ++ + K + + EM E +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 121 DIYSYNIWLSS---CESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
++++YNI + +I+ +F++M + +PN T++T+ Y K+ + +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 178 LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIR 237
LR + + + I ++ +++ G EV V + ++ + Y+ ++ +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 238 IDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNT 297
+ A ++ E + + LI K N+++A+ F + M G PN T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 298 WELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAF 340
+ L +G+ ++EA L++ + P +T +A
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREM----NDNGFSPSVVTYNAL 421
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 112/270 (41%), Gaps = 6/270 (2%)
Query: 49 LKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDM 108
L + T+ +L++ Y R D LL M KG + + +NV++ +V
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 109 LISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGK--DPAIVPNWSTFSTMATIYI 166
+++EM + LD +YN + Q + + P+ T++++
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYK--SIFPTIP 224
K +A + L ++ R + + L+ + G +E YRV P++
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV- 415
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
+ Y+A+++ +E A + E+ S D + ++ + ++ ++D+AL
Sbjct: 416 -VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEA 314
M + G P++ T+ L +G+ +R EA
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 226 LGYHAIVSSLIRID-DIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
L Y+A++ + IR +I AE +++E + + S + N+LI + NID AL F+
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-L 343
M G +PN T+ L +GY +++ + L+ K +P ++ + L
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM----ALKGLEPNLISYNVVINGL 285
Query: 344 CQDEDDTASTEILIGLLRKSGFLENEAYASLI 375
C++ + +L + R+ L+ Y +LI
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ ++++ + L D+A L M G + ++ +N ++ + + + + L+
Sbjct: 160 DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV 219
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQM---GKDPAIVPNWSTFSTMATIYIK 167
E+ E L++ ++ I LSS ++ +E+ + M G DP +V TFS++ K
Sbjct: 220 DEISE----LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVV----TFSSIINRLCK 271
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLL-SLYGGVGNKDEVYR-VWSTY-KSIFPTIP 224
+ + LR++E + + + L+ SL+ K +YR + Y + + IP
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF-----KANIYRHALALYSQMVVRGIP 326
Query: 225 N--LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
+ Y ++ L + D+ AEK ++ + + L+ K ++ A
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
M + +PN T+ + GY+ + EA+S L+K
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 39/243 (16%)
Query: 112 EMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKM 168
+M++ I+ D+ I + + C++ + +V ++M KD I PN T+S++ T K
Sbjct: 38 QMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRM-KDRGISPNVVTYSSLITGLCKS 96
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY---GGVGNKDEVYRVWS---------TY 216
+ AE L +++S+ + I F L+ Y G + D VY++ TY
Sbjct: 97 GRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 156
Query: 217 KSIF----------------------PTIPNL-GYHAIVSSLIRIDDIEGAEKLYEEWVS 253
S+ PN+ Y + + + ++ KL ++
Sbjct: 157 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 216
Query: 254 VRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSE 313
+ + N LI Y + ID AL F +MT G +PN ++ ++ G A+ V +
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 276
Query: 314 ALS 316
ALS
Sbjct: 277 ALS 279
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 72 ESLLDIMRSKGYVIHSL--PFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWL 129
++++ M+SK + +N ++ + +K+Y ++ + +M E D+ +YNI L
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL 261
Query: 130 SSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK 186
+ + KM++ +F++M +D P+ T++ + I K N+
Sbjct: 262 WTNYRLGKMDRFDRLFDEMARD-GFSPDSYTYNILLHILGKGNK---------------- 304
Query: 187 GRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEK 246
P L +L + EV I P++ L Y ++ L R ++E +
Sbjct: 305 -----PLAALTTL----NHMKEV--------GIDPSV--LHYTTLIDGLSRAGNLEACKY 345
Query: 247 LYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYI 306
+E V D ++I YV + +DKA F MT G +PN T+ + G
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Query: 307 ADKRVSEALSCLKK 320
EA LK+
Sbjct: 406 MAGEFREACWLLKE 419
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 51/311 (16%)
Query: 15 FRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKD----- 69
R S S+AA+ LV + E LNL + D G N++V+ L D
Sbjct: 326 LRFSPSEAAVS-SLVEGLRKRGKIEEA-LNLVKRVVD---FGVSPNLFVYNALIDSLCKG 380
Query: 70 ----KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSY 125
+AE L D M G + + +++++ ++ + D + EM + ++L +Y Y
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 126 NIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRI 185
N +++ F ++ M AE +KLE +
Sbjct: 441 N-----------------------SLINGHCKFGDISAAEGFM-----AEMINKKLEPTV 472
Query: 186 KGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIPNLGYHAIVSSLIRIDDIEG 243
+ + L+ Y G ++ R++ T K I P+I + ++S L R I
Sbjct: 473 -----VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT--FTTLLSGLFRAGLIRD 525
Query: 244 AEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSE 303
A KL+ E + N++I Y + ++ KA F + MT+ G VP++ ++ L
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 304 GYIADKRVSEA 314
G + SEA
Sbjct: 586 GLCLTGQASEA 596
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 29/259 (11%)
Query: 55 HGSLLNVYVHYRLKDKAESLLDIMRSKGYV---IHSLPFNVMMTLYMNLKEYDKVDMLIS 111
+ +L++ Y D A +LL+ M+S +H+ +++++ ++ + +DKV L+S
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHT--YSILIKSFLQVFAFDKVQDLLS 245
Query: 112 EMKEKNIRLDIYSYNIWLSS---CESIEKMEQVFEQM-GKDPAIVPNWSTFSTMATIYIK 167
+M+ + IR + +YN + + + +ME QM G+D +W+ ST+ +
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRA-FGG 304
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG 227
Q E E+C K +S + F+ LL YG GN ++ V + + +
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 228 YHAIVSSLIRIDDIE---------GAEKLYEEWVSV--------RSSDDARLGNLLIGWY 270
Y+ ++ + R D++ +E+++ V++ R+S ++G +L +
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVL--RF 422
Query: 271 VKNDNIDKALNFFEHMTDG 289
++N +I L FF + D
Sbjct: 423 IENSDIRLDLVFFNCLVDA 441
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 13/297 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D +T L+ +KA LL +M G + +N ++ + E +K +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 111 SEMKEKNI-RLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYI 166
++K ++ D+ +Y +S KM + + + M + I P TF+ + Y
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR-LGIYPTNVTFNVLVDGYA 323
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIP 224
K + AE+ K+ S D + F L+ Y VG + +R+W + +FP
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA- 382
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
Y ++++L + + A +L + S + N +I + K +++A E
Sbjct: 383 -FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF 341
M P+ T+ +L G+ R+ EA+S K A S P +T+S+
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS----PDKITVSSLL 494
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 13/297 (4%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D +T L+ +KA LL +M G + +N ++ + E +K +
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 111 SEMKEKNI-RLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYI 166
++K ++ D+ +Y +S KM + + + M + I P TF+ + Y
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR-LGIYPTNVTFNVLVDGYA 323
Query: 167 KMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS--TYKSIFPTIP 224
K + AE+ K+ S D + F L+ Y VG + +R+W + +FP
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA- 382
Query: 225 NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFE 284
Y ++++L + + A +L + S + N +I + K +++A E
Sbjct: 383 -FTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 285 HMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF 341
M P+ T+ +L G+ R+ EA+S K A S P +T+S+
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS----PDKITVSSLL 494
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 155/360 (43%), Gaps = 48/360 (13%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKV-HGVSSAERF-----FLN-LTDNLKDKRT 54
L+ Y W+ V SD ++ L+L K+ H +++A+R+ FL+ N D +
Sbjct: 85 LRYYSWL--------VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQV 136
Query: 55 HGSLL------NVYVHYRLKD----------KAESLLDIMRSKGYV---IHSLPFNVMMT 95
H NV V+ + D + E + + GY + +L +M
Sbjct: 137 HSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMI 196
Query: 96 LYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIV 152
+ V+ + EM + I+ +++++N+ +++ C++ + K V E M K
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-KVYGCS 255
Query: 153 PNWSTFSTMATIYIKMN---QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEV 209
PN +++T+ Y K+ + KA+ L+++ + F+ L+ G D +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID---GFWKDDNL 312
Query: 210 YRVWSTYKSIFP--TIPN-LGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLL 266
+K + PN + Y+++++ L I A + ++ VS + N L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 267 IGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDG 326
I + KND + +AL+ F + G+VP + + +L + Y ++ + + LK+ +G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA-LKEEMEREG 431
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 131/295 (44%), Gaps = 9/295 (3%)
Query: 57 SLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEK 116
+ ++V+V +KA L+ M+ G V + + +N M+ Y +L ++ L+ +M K
Sbjct: 282 TTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSK 341
Query: 117 NIRLDIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
D SY +L + I ++ + ++M K+ +VP+ T++T+ + K + ++
Sbjct: 342 GCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN-LGYHAIV 232
A L+ + + D++ + ++ G E + + S P+ + Y A+V
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461
Query: 233 SSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
+ R+ +++ A+KL + + + L+ + +A +
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521
Query: 293 PNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQD 346
PNS T+ ++ G + ++SEA +++ K + P P+ ++ + LC+D
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVL----KGFFPGPVEINLLLQSLCRD 572
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 123/303 (40%), Gaps = 30/303 (9%)
Query: 10 NRQERFRVSASDAAIQ--LDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRL 67
++ +RFRV + L AK+ +RFF KD G+ V+ + +
Sbjct: 216 SKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF-------KDMIGAGARPTVFTYNIM 268
Query: 68 KD---------KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNI 118
D A L + M+ +G V ++ +N M+ + + D EMK+
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 119 RLDIYSYNIWLSSCESIEKME---QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAE 175
D+ +YN ++ K+ + + +M K + PN ++ST+ + K ++A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREM-KGNGLKPNVVSYSTLVDAFCKEGMMQQA- 386
Query: 176 DCLRKLESRIKGRDRIPFHY----LLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
K ++ +P Y L+ +GN + +R+ + + + Y A+
Sbjct: 387 ---IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 232 VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
+ L + ++ AE+L+ + + + N LI +VK N+D+AL + G
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 292 VPN 294
P+
Sbjct: 504 KPD 506
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 131/329 (39%), Gaps = 13/329 (3%)
Query: 53 RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISE 112
R+ LL+ + D + M G +N+M+ + + L E
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 113 MKEKNIRLDIYSYNIWLSSCESIEKMEQV---FEQMGKDPAIVPNWSTFSTMATIYIKMN 169
MK + + D +YN + + +++ FE+M KD P+ T++ + + K
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFG 346
Query: 170 QFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN-LGY 228
+ + R+++ + + + L+ + G + + + + + +PN Y
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTY 405
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+++ + +I ++ A +L E + V + LI + + +A F M
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAF-FKLCQDE 347
G +PN ++ L G++ K + AL L + + KP L F + LC E
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNEL----KGRGIKPDLLLYGTFIWGLCSLE 521
Query: 348 DDTASTEILIGLLRKSGFLENE-AYASLI 375
A+ ++++ +++ G N Y +L+
Sbjct: 522 KIEAA-KVVMNEMKECGIKANSLIYTTLM 549
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 138/312 (44%), Gaps = 17/312 (5%)
Query: 4 VYDWMNNRQERFRVSASDAAIQL--DLVAKVHGVSSAERFF-----LNLTDNLKDKRTHG 56
V+ N +E F ++ + L + K + + SA + + L NL T+
Sbjct: 174 VHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLV---TYT 230
Query: 57 SLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEK 116
++L YV + A+ +L+ M +G+ + + V+M Y L + + ++ +M++
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKN 290
Query: 117 NIRLDIYSYNIWLSS-CESIEKME--QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
I + +Y + + + C+ + E +F++M + + +P+ S + + ++ ++
Sbjct: 291 EIEPNEVTYGVMIRALCKEKKSGEARNMFDEM-LERSFMPDSSLCCKVIDALCEDHKVDE 349
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY-KSIFPTIPNLGYHAIV 232
A RK+ D L+ G E +++ + K P++ L Y+ ++
Sbjct: 350 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSL--LTYNTLI 407
Query: 233 SSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
+ + ++ A +L+++ + +A N+LI KN N+ + + E M + G
Sbjct: 408 AGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF 467
Query: 293 PNSNTWELLSEG 304
PN T+ +L EG
Sbjct: 468 PNKTTFLILFEG 479
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 207 DEVYRVWSTYKSIFPTIPNL-GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNL 265
D V+ ++ K F PN+ + +V +L + +DIE A K+ +E S+ +
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 266 LIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCL 318
++G YV +++ A E M D G P++ T+ +L +GY R SEA + +
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 117/284 (41%), Gaps = 6/284 (2%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ L+ YV +A ++++M KG + +++ + ++ Y + D+ L
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 111 SEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMG--KDPAIVPNWSTFSTMATIYIKM 168
MKE + +YN LS + ++ + + K PN +T++TM +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGY 228
+ R+++S DR F+ L+S YG G++ + +++ Y
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 229 HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD 288
+A++++L R D E + + S +L++ Y K N + +
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Query: 289 GGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKP 332
G P +W LL +A+ + AL+ ++AF +KP
Sbjct: 590 GQIFP---SWMLLRTLLLANFKC-RALAGSERAFTLFKKHGYKP 629
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 114/279 (40%), Gaps = 22/279 (7%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T+ +LLN E+++ M+SKG+ +++M+ Y Y ++ + + +
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 114 KEKNIRLDIYSYNIWL---------SSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATI 164
KE I + W+ C ++ E+ F + K P+ F++M +I
Sbjct: 588 KEGQI------FPSWMLLRTLLLANFKCRALAGSERAF-TLFKKHGYKPDMVIFNSMLSI 640
Query: 165 YIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTI- 223
+ + N +++AE L + D + ++ L+ +Y G E ++ K++ +
Sbjct: 641 FTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG---ECWKAEEILKTLEKSQL 697
Query: 224 -PNL-GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALN 281
P+L Y+ ++ R ++ A ++ E N + Y + +
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 282 FFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
E M PN T++++ +GY + SEA+ + K
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 113/255 (44%), Gaps = 15/255 (5%)
Query: 109 LISEMKEKNIRLDIYSYNIWLSS-CE--SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIY 165
L +M+E+NI+ + Y+I + S C+ S + +F +M + I + T+S++
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGL 290
Query: 166 IKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLY---GGVGNKDEVYRVWSTYKSIFPT 222
+++ LR++ R D + F L+ ++ G + E+Y T + I P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT-RGIAPD 349
Query: 223 IPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
+ Y++++ + + + A ++++ VS D ++LI Y K +D +
Sbjct: 350 --TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 283 FEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFK 342
F ++ G +PN+ T+ L G+ +++ A K+ F S+ P +T
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAA----KELFQEMVSRGVPPSVVTYGILLD 463
Query: 343 -LCQDEDDTASTEIL 356
LC + + + EI
Sbjct: 464 GLCDNGELNKALEIF 478
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 119/283 (42%), Gaps = 13/283 (4%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSY--- 125
D A SL + M KG + ++ ++ N ++D ++ EM +NI D+ ++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 126 -NIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESR 184
++++ + +E E E + + I P+ T++++ + K N +A + S+
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITR--GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 185 IKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPN-LGYHAIVSSLIRIDDIEG 243
D + + L++ Y D+ R++ S IPN + Y+ +V + +
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNA 438
Query: 244 AEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSE 303
A++L++E VS +L+ N ++KAL FE M + ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 304 GYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFF-KLCQ 345
G +V +A S F + K KP +T + LC+
Sbjct: 499 GMCNASKVDDAWS----LFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D T+ SL++ + +A + D+M SKG + +++++ Y K D L
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 111 SEMKEKNIRLDIYSYN-IWLSSCES--IEKMEQVFEQM---GKDPAIVPNWSTFSTMATI 164
E+ K + + +YN + L C+S + +++F++M G P++V T+ +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV----TYGILLDG 464
Query: 165 YIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTY-----KSI 219
+ KA + K++ K R + + G+ N +V WS + K +
Sbjct: 465 LCDNGELNKALEIFEKMQ---KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 220 FPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKA 279
P + + Y+ ++ L + + A+ L+ + + D N+LI ++ + +
Sbjct: 522 KPDV--VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 280 LNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEAL 315
+ E M G +S+T +++ + ++D+R+ ++
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 148/382 (38%), Gaps = 61/382 (15%)
Query: 9 NNRQERFRVSASD----AAIQLDLVAK--VHG--VSSAERFFLNLTDNLK-----DKRTH 55
NN + FR S +AI ++ K V G AE F L D K D++ +
Sbjct: 198 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 56 GSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKE 115
++ +Y +KA + M KG ++ +N +M+ + KE K+ +M+
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI---YDQMQR 314
Query: 116 KNIRLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFE 172
+I+ D+ SY + + + + E+ VFE+M D + P ++ + + E
Sbjct: 315 SDIQPDVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVE 373
Query: 173 KAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIV 232
+A+ + + RDR IFP + Y ++
Sbjct: 374 QAKTVFKSMR-----RDR----------------------------IFPDL--WSYTTML 398
Query: 233 SSLIRIDDIEGAEKLYEEW-VSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
S+ + D+EGAEK ++ V + G L+ G Y K ++++K + +E M G
Sbjct: 399 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG-YAKANDVEKMMEVYEKMRLSGI 457
Query: 292 VPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTA 351
N + + K AL K+ + K K + LS L +D+
Sbjct: 458 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS----LASTQDELE 513
Query: 352 STEILIGLLRKSGFLENEAYAS 373
+ L G+ ++ + Y S
Sbjct: 514 EAKELTGIRNETATIIARVYGS 535
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 87 SLPFNVMMTLYMNLKEYDKVDMLISEM-KEKNIRLDIYSYNIWLSSCESIEKME---QVF 142
S +N ++ + M +++KV + +EM E + D +Y+ +SS E + + + ++F
Sbjct: 197 SSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF 256
Query: 143 EQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGG 202
++M KD + P ++T+ IY K+ + EKA D +++ + L+ G
Sbjct: 257 DEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK 315
Query: 203 VGNKDEVYRVWSTYKSIF--PTIPNLGY-HAIVSSLIRIDDIEGAEKLYEEWVSVRSSDD 259
G DE Y YK + P++ + + +++ L ++ +E ++ E R +
Sbjct: 316 AGRVDEAY---GFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPT 372
Query: 260 ARLGNLLI-GWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCL 318
N +I + ++ + ++F+ M P+ T+ +L +GY RV +AL L
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 319 KKAFATDGSKSWKPKPLTLSAFFK-LCQDEDDTASTEILIGLLRKSGFLENEAYASLI 375
++ K + P P + L + + A+ E+ L G + + YA +I
Sbjct: 433 EEM----DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMI 486
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 15/339 (4%)
Query: 3 QVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLT--DNLKDKRTHGSLLN 60
Q+ + R R R S IQ K V A F +T D ++ ++ +L+N
Sbjct: 102 QILRLVRYRNVRCRESLFMGLIQH--YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLIN 159
Query: 61 VYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
V V +KA+S D + +S+ FN+++ +++ +++ + EM E ++
Sbjct: 160 VLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQP 219
Query: 121 DIYSYNI---WLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
+ +YN +L + + K + + E M K I PN TF + ++ +A+
Sbjct: 220 SVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Query: 178 LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSL 235
+ +E R + + L+S G G DE + K I P + + Y+ +V+ L
Sbjct: 279 MFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDV--VIYNILVNHL 336
Query: 236 IRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
+ A ++ E +A ++I + + ++ D LN M P
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 296 NTWELLSEGYIADKRVSEA---LSCLKKAFATDGSKSWK 331
T+ + G I + A L + K + GS +W+
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQ 435
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 148/382 (38%), Gaps = 61/382 (15%)
Query: 9 NNRQERFRVSASD----AAIQLDLVAK--VHG--VSSAERFFLNLTDNLK-----DKRTH 55
NN + FR S +AI ++ K V G AE F L D K D++ +
Sbjct: 191 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 56 GSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKE 115
++ +Y +KA + M KG ++ +N +M+ + KE K+ +M+
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKI---YDQMQR 307
Query: 116 KNIRLDIYSYNIWLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFE 172
+I+ D+ SY + + + + E+ VFE+M D + P ++ + + E
Sbjct: 308 SDIQPDVVSYALLIKAYGRARREEEALSVFEEM-LDAGVRPTHKAYNILLDAFAISGMVE 366
Query: 173 KAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIV 232
+A+ + + RDR IFP + Y ++
Sbjct: 367 QAKTVFKSMR-----RDR----------------------------IFPDL--WSYTTML 391
Query: 233 SSLIRIDDIEGAEKLYEEW-VSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
S+ + D+EGAEK ++ V + G L+ G Y K ++++K + +E M G
Sbjct: 392 SAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG-YAKANDVEKMMEVYEKMRLSGI 450
Query: 292 VPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTA 351
N + + K AL K+ + K K + LS L +D+
Sbjct: 451 KANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS----LASTQDELE 506
Query: 352 STEILIGLLRKSGFLENEAYAS 373
+ L G+ ++ + Y S
Sbjct: 507 EAKELTGIRNETATIIARVYGS 528
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 53 RTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISE 112
RT G+++N Y ++A M+ G + FN ++ ++N+ + D V ++
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 113 MKEKNIRLDIYSY----NIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKM 168
M+E ++ D+ ++ N W SS +++ E+++ M + I P+ FS +A Y +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAW-SSVGDMKRCEEIYTDM-LEGGIDPDIHAFSILAKGYARA 649
Query: 169 NQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNL 226
+ EKAE L ++ + + + ++S + G + +V+ I PNL
Sbjct: 650 GEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL 707
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 124/267 (46%), Gaps = 18/267 (6%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D R+ L+N + +A S+ + + +G+ + + ++T K + + LI
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 111 SEMKEKNIRLDIYSYN-IWLSSCES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIK 167
S++++ ++ D +N I +S ES +++ ++FE+M K+ P STF+T+ Y K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM-KESGCKPTASTFNTLIKGYGK 436
Query: 168 MNQFEKAEDCLRKL--ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS-TYK----SIF 220
+ + E++ L + + ++ DR + L+ + N+ ++ W+ YK +
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRT-CNILVQAWC---NQRKIEEAWNIVYKMQSYGVK 492
Query: 221 PTIPNLGYHAIVSSLIRIDDIEGAEKLY-EEWVSVRSSDDARLGNLLIGWYVKNDNIDKA 279
P + + ++ + + RI AE + + + + R ++ Y + +++A
Sbjct: 493 PDV--VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 280 LNFFEHMTDGGSVPNSNTWELLSEGYI 306
L FF M + G PN + L +G++
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFL 577
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T G L+ +Y ++AE MR G V S ++ M+T+Y L+ YDK + +I M
Sbjct: 247 TIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLM 305
Query: 114 KEKNIRLDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
K+ +RL + ++ + L++ KM E + M + PN ++T+ T Y K+ +
Sbjct: 306 KQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM-EAAGFSPNIIAYNTLITGYGKIFK 364
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
E A+ +L + D + ++ +G N +E + K +
Sbjct: 365 MEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFT 424
Query: 231 IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGG 290
+++ + D +GA K E+ + + LG +++ Y K ID +
Sbjct: 425 LINLQAKYGDRDGAIKTIEDMTGIGCQYSSILG-IILQAYEKVGKIDVVPCVLKGSFHNH 483
Query: 291 SVPNSNTWELLSEGYIADKRVSEALSCLKK 320
N ++ L Y+ V + L L++
Sbjct: 484 IRLNQTSFSSLVMAYVKHGMVDDCLGLLRE 513
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T LL+VY +L K L + + G V+ + +N ++ Y K+Y + I M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 114 KEKNIRLDIYSYNIWLSSC---ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+ + + +YN L + + +EK + ++M K + P+ T++ M IY +
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS-GPDHYTYNIMINIYGEQGW 818
Query: 171 FEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHA 230
++ D L++L+ G D ++ L+ YG G +E + + + Y
Sbjct: 819 IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTN 878
Query: 231 IVSSLIRIDD 240
+V++L R D+
Sbjct: 879 LVTALRRNDE 888
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 129/327 (39%), Gaps = 51/327 (15%)
Query: 27 DLVAKV-----HGVSSAERFFLNLTDN---LKDKRTHGSLLNVYVHYRLKDKAESLLDIM 78
DL+ +V H A RFF + D RT+ S++++ R + S+L+ M
Sbjct: 162 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 221
Query: 79 RSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKM 138
+KG + F + M + KE K + MK+ ++ + + N L S
Sbjct: 222 GTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA--- 277
Query: 139 EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLS 198
++GK+ ++ KL+ R + + + LL+
Sbjct: 278 -----KLGKEAQVL-------------------------FDKLKERFTP-NMMTYTVLLN 306
Query: 199 LYGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRS 256
+ V N E R+W+ + + P I + ++ ++ L+R A KL+ S
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDI--VAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 257 SDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
+ R ++I + K +++ A+ +F+ M D G P++ + L G+ K++
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 317 CLKKAFATDGSKSWKPKPLTLSAFFKL 343
LK+ K P T +A KL
Sbjct: 425 LLKEM----QEKGHPPDGKTYNALIKL 447
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 131/321 (40%), Gaps = 14/321 (4%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKR------TH 55
L++++ M + +R S + +D + K ++ AE+ F D + +R T+
Sbjct: 199 LELFNRM--KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF----DEMLARRLLPSLITY 252
Query: 56 GSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKE 115
+L++ Y +K+ + + M++ + FN ++ + + ++ EMK+
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 116 KNIRLDIYSYNIWLSSCESIEKMEQVFE--QMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
D ++++I S EK E + D + N T S + K + EK
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVS 233
AE+ L + ++ + + ++ ++ Y G+ + +L Y+ ++
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 234 SLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVP 293
+ ++E AEK + S N+LIG Y + DK + + M D G++P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 294 NSNTWELLSEGYIADKRVSEA 314
N ++ L ++ EA
Sbjct: 493 NVVSYGTLINCLCKGSKLLEA 513
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 114/253 (45%), Gaps = 12/253 (4%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIW 128
DK +L M G + + + + ++ + + ++ +M+++ + + YN+
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 129 LSSCESIEKMEQVF---EQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRI 185
+ C S K+E F ++M K I N T++T+ + +AED L ++ +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 186 KGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYK--SIFPTIPNLGYHAIVSSLIRIDDIEG 243
D ++ L+S YG GN ++ K I PT+ YH ++ SL + IE
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT--YHLLI-SLCTKEGIEL 651
Query: 244 AEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSE 303
E+L+ E +S++ D + N ++ Y + +++KA N + M + + T+ L
Sbjct: 652 TERLFGE-MSLKP--DLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLIL 708
Query: 304 GYIADKRVSEALS 316
G + ++ E S
Sbjct: 709 GQLKVGKLCEVRS 721
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 8/252 (3%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLK-EYDKVDMLISEMKEKNIRLDIYSYNIWLSSC 132
L+D M GY + FN+++ D V+ I K N R +SYN L S
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS-KTFNYRPYKHSYNAILHSL 232
Query: 133 ESIEK---MEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRD 189
+++ ++ V+EQM +D P+ T++ + ++ + ++ L ++ D
Sbjct: 233 LGVKQYKLIDWVYEQMLED-GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPD 291
Query: 190 RIPFHYLLSLYGGVGNKD-EVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLY 248
++ LL + GNK + + + + + + ++ L R +E +
Sbjct: 292 LYTYNILLH-HLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFM 350
Query: 249 EEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIAD 308
+E V V + D ++I Y+ ++KA F+ MT+ G +PN T+ + G+
Sbjct: 351 DETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 309 KRVSEALSCLKK 320
+ EA + LK+
Sbjct: 411 GKFKEACALLKE 422
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 21/335 (6%)
Query: 17 VSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLD 76
+S + A LD+V ++ VS E+ N D KD RT L++VY + K + +
Sbjct: 196 LSIAGEARNLDMVDEL--VSEMEK---NGCD--KDIRTWTILISVYGKAKKIGKGLLVFE 248
Query: 77 IMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIE 136
MR G+ + + +N+M+ D EM EK I + +Y + L E
Sbjct: 249 KMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSE 308
Query: 137 KMEQVFEQMGKDPAIVPNWS---TFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPF 193
K++ V + + D + S F + + + ++A + +R+L+++ D F
Sbjct: 309 KVD-VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 194 HYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVS 253
L+ + + K N+ Y I+S +R +D+ A + +E V
Sbjct: 368 EILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFE--VI 424
Query: 254 VRSSDDARLGNL--LIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRV 311
+S R+ ++ K +K N F M + G P+S + G++ RV
Sbjct: 425 KKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRV 484
Query: 312 SEALSCLKKAFATDGSKSWKPKPLTLSAFFK-LCQ 345
+EA K F++ K KP + S F K LC+
Sbjct: 485 AEAW----KVFSSMEEKGIKPTWKSYSIFVKELCR 515
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 124/284 (43%), Gaps = 20/284 (7%)
Query: 57 SLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEK 116
+L++ +V +AE L M +G ++ + ++ + + DK + ++ M K
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 117 NIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
+I ++NI ++ C++ I+ ++F +M +V + T++T+ + ++ + E
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLEV 440
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLG---YHA 230
A++ +++ SR D + + LL G+ + E + ++ I + L Y+
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLD---GLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 231 IVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGG 290
I+ + ++ A L+ D + N++IG K ++ +A F M + G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 291 SVPNSNTWELLSEGYIAD-------KRVSEALSCLKKAFATDGS 327
PN T+ +L ++ + K + E C F+ D S
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC---GFSVDAS 598
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 18/279 (6%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T G L+ Y L DK LL+ M S G + + + +N +++ + D + ++ +M
Sbjct: 184 TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 114 KEKNIRLDIYSYNIWLSS-CESIEKME--QVFEQMGKDPAI---VPNWSTFSTMATIYIK 167
+E+ + DI ++N +S+ C+ + ++ ++F M D + PN T++ M + K
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 168 MNQFEKAEDCLRKLESRIKGRDRIPF--HYLLSLYGGVGN----KDEVYRVWSTYKSIFP 221
+ E A + L I+ D + Y + L G V + + E T K I P
Sbjct: 304 VGLLEDA----KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 222 TIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALN 281
+I Y+ ++ L ++ + A+ + DA L+ Y +D A +
Sbjct: 360 SI--YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKS 417
Query: 282 FFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKK 320
+ M +PN+ T +L R+SEA L+K
Sbjct: 418 LLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 16/259 (6%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-C 132
L D+M++K + + PFN +++ + +++ L+ +M E IR D+ + I +++ C
Sbjct: 282 LSDLMKNKT-PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 133 ES--IEKMEQVFEQM-GK---DPAIVPNWST-FSTMATIYIKMNQFEKAEDCL--RKLES 183
+S +++ +VFEQM GK D ++ S F+T+ K+ + ++AE+ L KLE
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 184 RIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDI 241
R + + ++ L+ Y G + V S K I P + + + IV + R +
Sbjct: 401 RCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV--VTVNTIVGGMCRHHGL 457
Query: 242 EGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELL 301
A + + + LI N++KA+ ++E M + G P++ + L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 302 SEGYIADKRVSEALSCLKK 320
G +R +A+ ++K
Sbjct: 518 ISGLCQVRRDHDAIRVVEK 536
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 13/175 (7%)
Query: 219 IFPTIPNLG-------YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYV 271
+F I LG Y+A++ +L++ + ++ A +++ S D N+LI
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 272 KNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWK 331
K +D+A+ + M G+ PN T+ +L +G++ RV EAL K +
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEAL----KQLEMMRVRKLN 282
Query: 332 PKPLTLSAFFK-LCQDEDDTASTEILIGLLRKSGFLENEAY-ASLIGLSDATIGK 384
P T+ F + + + E+L+G + K L+ Y A L LS+ ++ K
Sbjct: 283 PNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK 337
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 135 IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGR---DRI 191
I+K VFE M K + + T+S M ++ E A R+LE K R D +
Sbjct: 158 IQKAFTVFEFMRKKENVTGH--TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVV 215
Query: 192 PFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEW 251
++ +SL G + N E R+W K + Y +VS +R E A +Y+E
Sbjct: 216 LYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEM 275
Query: 252 VSVRSS--DDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPN 294
V+ + S +DA +I K + D AL F+ M G PN
Sbjct: 276 VNNKISLREDAMYA--MISACTKEEKWDLALKIFQSMLKKGMKPN 318
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 16/259 (6%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-C 132
L D+M++K + + PFN +++ + +++ L+ +M E IR D+ + I +++ C
Sbjct: 282 LSDLMKNKT-PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 133 ES--IEKMEQVFEQM-GK---DPAIVPNWST-FSTMATIYIKMNQFEKAEDCL--RKLES 183
+S +++ +VFEQM GK D ++ S F+T+ K+ + ++AE+ L KLE
Sbjct: 341 KSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 184 RIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDI 241
R + + ++ L+ Y G + V S K I P + + + IV + R +
Sbjct: 401 RCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV--VTVNTIVGGMCRHHGL 457
Query: 242 EGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELL 301
A + + + LI N++KA+ ++E M + G P++ + L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 302 SEGYIADKRVSEALSCLKK 320
G +R +A+ ++K
Sbjct: 518 ISGLCQVRRDHDAIRVVEK 536
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 18/225 (8%)
Query: 104 DKVDMLISEMKEKNIRLDIYSYNIWLSSCESI--EKMEQVFEQMGKDPAIVPNWSTFSTM 161
++ + L+ EM+E+ I I Y+ + + EK V + K+ P T+ +
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 162 ATIYIKMNQFEKAEDCLRKL-ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIF 220
+Y K+ + KA + R + E +K + Y + + G V KD W+ ++F
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKT---YSMMINGFVKLKD-----WANAFAVF 542
Query: 221 PTIPNLG-------YHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKN 273
+ G Y+ I+S+ + +++ A + +E +R R +I Y K+
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 274 DNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCL 318
++ ++L F+ M G VP +T+ L G + +++ +A+ L
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEIL 647
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/249 (18%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 61 VYVHYRL--KDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNI 118
+Y H + ++AE+L+ M +G ++ MM Y + + K ++ +KE
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 119 RLDIYSYNIWLSSCESIEKMEQVFE--QMGKDPAIVPNWSTFSTMATIYIKMNQFEKAED 176
+ +Y ++ + K+ + E ++ K+ + N T+S M ++K+ + A
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 177 CLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI 236
+ D I ++ ++S + G+GN D + + + + I+
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 237 RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSN 296
+ D+ + ++++ N LI V+ ++KA+ + MT G N +
Sbjct: 601 KSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEH 660
Query: 297 TWELLSEGY 305
T+ + +GY
Sbjct: 661 TYTKIMQGY 669
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 121/275 (44%), Gaps = 27/275 (9%)
Query: 27 DLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIH 86
DL HG ERF N+ + S++ Y+ A L D M+ +
Sbjct: 263 DLCGDDHGGEFRERFCKNVV-------SWNSMIKAYLKVGDVVSARLLFDQMKDR----D 311
Query: 87 SLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMG 146
++ +N M+ Y+++ + L SEM + D +S+N+ +S S+ +E
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFE 367
Query: 147 KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNK 206
K P + +++++ Y K +++A D ++ + D LLS G+ N
Sbjct: 368 KTPE--KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 207 D---EVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLG 263
+++++ K++ P +P ++A+++ R +I + ++++E ++ +
Sbjct: 426 RLGMQMHQI--VVKTVIPDVPV--HNALITMYSRCGEIMESRRIFDE---MKLKREVITW 478
Query: 264 NLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTW 298
N +IG Y + N +ALN F M G P+ T+
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 101 KEYDKVDMLISEMKEKNIRLDIYSYNIWL-SSCES--IEKMEQVFEQMGKDPA------- 150
+ +D +D L+S+M+E R D+ YN + SC+ + ++F++M +D
Sbjct: 154 RVFDAID-LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 151 ---------------------------IVPNWSTFSTMATIYIKMNQFEKAEDCLRKLES 183
IVPN TF+ + +++K +F +A ++
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 184 RIKGRDRIPFHYL---LSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDD 240
R D ++ L L ++G V ++ + T K P + + Y+ +++ +
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT-KGCLPDV--VTYNTLINGFCKSKR 329
Query: 241 IEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWEL 300
++ KL+ E D N +I Y + D A F M S PN T+ +
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSI 386
Query: 301 LSEGYIADKRVSEAL 315
L G + RV +AL
Sbjct: 387 LLYGLCMNWRVEKAL 401
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 128/327 (39%), Gaps = 51/327 (15%)
Query: 27 DLVAKV-----HGVSSAERFFLNLTDN---LKDKRTHGSLLNVYVHYRLKDKAESLLDIM 78
DL+ +V H A RFF + D RT+ S++++ R + S+L+ M
Sbjct: 161 DLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM 220
Query: 79 RSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKM 138
+KG + F + M + KE K + MK+ ++ + + N L S
Sbjct: 221 GTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRA--- 276
Query: 139 EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLS 198
++GK+ ++ KL+ R + + + LL+
Sbjct: 277 -----KLGKEAQVL-------------------------FDKLKERFTP-NMMTYTVLLN 305
Query: 199 LYGGVGNKDEVYRVWSTY--KSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRS 256
+ V N E R+W+ + P I + ++ ++ L+R A KL+ S
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDI--VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 257 SDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
+ R ++I + K +++ A+ +F+ M D G P++ + L G+ K++
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 317 CLKKAFATDGSKSWKPKPLTLSAFFKL 343
LK+ K P T +A KL
Sbjct: 424 LLKEM----QEKGHPPDGKTYNALIKL 446
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 90 FNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSC---ESIEKMEQVFEQMG 146
FN +M Y +++ +++ M+ + DI ++N+ + S + EKMEQ F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 147 KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNK 206
+ P TF++M Y K +KAE +K+ I + ++ +YG G+
Sbjct: 306 RSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 207 DEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLL 266
++ + +A++ R A+KL+ + R DA L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 267 IGWYVKNDNIDKALNFFEHMTDGGSVPN 294
Y K D ++ + M G VPN
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 126/299 (42%), Gaps = 31/299 (10%)
Query: 8 MNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRL 67
+ + E+F+ S + + +VHG+ SA F L + K S ++ + Y+
Sbjct: 67 LTQKVEKFKRSCESESFR-----QVHGLYSA--FIRRLREAKK-----FSTIDEVLQYQK 114
Query: 68 KDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNI 127
K D ++S+ +VI +M LY + L EM E N + S+N
Sbjct: 115 K------FDDIKSEDFVIR------IMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNA 162
Query: 128 WLSSCESIEKMEQ---VFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESR 184
LS+ + +K+++ F+++ + I P+ T++TM + + +LE
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKN 222
Query: 185 IKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDIE 242
D I F+ LL + E R+W KS + P I Y++ V L R
Sbjct: 223 GFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI--RSYNSRVRGLTRNKKFT 280
Query: 243 GAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELL 301
A L + + S D N LI Y ++N+++ + + M + G P++ T+ +L
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCML 339
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 4/208 (1%)
Query: 90 FNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSC---ESIEKMEQVFEQMG 146
FN +M Y +++ +++ M+ + DI ++N+ + S + EKMEQ F+ +
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 147 KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNK 206
+ P TF++M Y K +KAE +K+ I + ++ +YG G+
Sbjct: 306 RSKE-KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSV 364
Query: 207 DEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLL 266
++ + +A++ R A+KL+ + R DA L
Sbjct: 365 SRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFL 424
Query: 267 IGWYVKNDNIDKALNFFEHMTDGGSVPN 294
Y K D ++ + M G VPN
Sbjct: 425 YKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 51 DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLI 110
D+ T+ ++++ +V+ L D+A +L M G + + +NV++ Y + D+ + L+
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 111 SEMKE-KNIRLDIYSYNIWLSSCESIEKMEQV---FEQMGKDPAIVPNWSTFSTMATIYI 166
EM E I D+ SYNI + C I+ F +M + I P +++T+ +
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM-RTRGIAPTKISYTTLMKAFA 569
Query: 167 KMNQFEKAEDCLRKL--ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYK--SIFPT 222
Q + A ++ + R+K D I ++ L+ Y +G ++ RV S K +P
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVK-VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 223 IPNLG 227
+ G
Sbjct: 629 VATYG 633
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 16/259 (6%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-C 132
L D+M++K + + PFN +++ + +++ L+ +M E IR D+ + I +++ C
Sbjct: 282 LSDLMKNKT-PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 133 ES--IEKMEQVFEQM-GK---DPAIVPNWST-FSTMATIYIKMNQFEKAEDCL--RKLES 183
+S +++ +VFE+M GK D ++ S F+T+ K+ + ++AE+ L KLE
Sbjct: 341 KSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 184 RIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDI 241
R + + ++ L+ Y G + V S K I P + + + IV + R +
Sbjct: 401 RC-APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV--VTVNTIVGGMCRHHGL 457
Query: 242 EGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELL 301
A + + + LI N++KA+ ++E M + G P++ + L
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Query: 302 SEGYIADKRVSEALSCLKK 320
G +R +A+ ++K
Sbjct: 518 ISGLCQVRRDHDAIRVVEK 536
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 28/248 (11%)
Query: 104 DKVDMLISEMKEKNIRLDIYSYNIWLSS---CESIEKMEQVFEQMGKDPAIVPNWSTFST 160
++ L EM E+ + + Y L++ I+ + ++M P P+ T+ST
Sbjct: 141 NRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYST 200
Query: 161 MATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIF 220
+ + +QF+ + ++++ R+ + + + +LS YG VG D++ +V S
Sbjct: 201 LLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVST 260
Query: 221 PTIPNL-GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKA 279
P++ + I+S + I+ E YE++ + + R N+LIG Y K DK
Sbjct: 261 ACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKM 320
Query: 280 LNFFEHM-------------------TDGGSVPNSNTW--ELLSEGYIADKRVSEALSCL 318
+ E+M D G N ++ SEG AD ++ CL
Sbjct: 321 SSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKAD---TKTFCCL 377
Query: 319 KKAFATDG 326
+A G
Sbjct: 378 INGYANAG 385
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 24/310 (7%)
Query: 35 VSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMM 94
+ A +FF ++ N++D + +++ Y D+A L D + V + M+
Sbjct: 235 IVEARQFFDSM--NVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMV 288
Query: 95 TLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPN 154
+ Y+ + ++ L +M E+N S+N L+ E+ME E P N
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNE----VSWNAMLAGYVQGERMEMAKELFDVMPC--RN 342
Query: 155 WSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWS 214
ST++TM T Y + + +A++ K+ R D + + +++ Y G+ E R++
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 215 TYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKND 274
+ + + + +S+ + +E ++L+ V +GN L+ Y K
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 275 NIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKP 334
+I++A + F+ M V +W + GY AL + F + + KP
Sbjct: 459 SIEEANDLFKEMAGKDIV----SWNTMIAGYSRHGFGEVAL----RFFESMKREGLKPDD 510
Query: 335 LTLSAFFKLC 344
T+ A C
Sbjct: 511 ATMVAVLSAC 520
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 90 FNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCES---IEKMEQVFEQMG 146
FN++M++ + ++ + ++ ++E + D Y +SSC ++ M +VF QM
Sbjct: 470 FNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM- 528
Query: 147 KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNK 206
+ + N TF + + Q KA L S+ DR+ F+ L+S G G
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 207 DEVYRVWSTYKS-IFPTIPN-LGYHAIVSSLIRIDDIEGAEKLYE 249
D + V + K+ P P+ + A++ + +E A+++Y+
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 18/259 (6%)
Query: 54 THGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
T G+L++ KA I+RSK + FN +++ D+ +++EM
Sbjct: 539 TFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEM 598
Query: 114 KEKN--IRLDIYSYNIWLSSC---ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKM 168
K + I D S + +C +E+ ++V++ + K + T I +
Sbjct: 599 KAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK-------YGIRGTPEVYTIAV 651
Query: 169 NQFEKAED----C--LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPT 222
N K+ D C + ++ + D + F L+ + G DE + + KS
Sbjct: 652 NSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIR 711
Query: 223 IPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNF 282
+ + Y +++ + D + A +LYE+ S++ N LI + + + KA+ +
Sbjct: 712 LGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEY 771
Query: 283 FEHMTDGGSVPNSNTWELL 301
+ + G PN+ T+ +L
Sbjct: 772 LDEIKTLGLKPNTITYSML 790
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 26 LDLVAKVHGVSSAERFFLNLTDNLK-----DKRTHGSLLNVYVHYRLKDKAESLLDIMRS 80
+ L KV + AE + L + D T ++N+Y + KAE++ D M+
Sbjct: 652 IKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQ 711
Query: 81 KGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCESIEKMEQ 140
+G + F +M+ +Y +++ + +M+E I D SYN L + ++
Sbjct: 712 RGEA-NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 141 VFEQMGK--DPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLE 182
E + I P+ STF ++ TI +K+ +KA +RK+E
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA---VRKIE 811
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 138/353 (39%), Gaps = 50/353 (14%)
Query: 33 HGVSSAERFFLNLTD-NLK-DKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPF 90
H V AE + D N++ D+ T +L +YV + +K+ S G + S +
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGN-MSSEGY 474
Query: 91 NVMMTLYMN---LKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS---CESIEKMEQVFEQ 144
+ + Y L E ++V + E+ ++ + YN+ + + +S EK ++FE
Sbjct: 475 SANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGISKSCEKACELFES 530
Query: 145 MGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVG 204
M + P+ T++T+ I + K L K+ D IP
Sbjct: 531 M-MSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP------------ 577
Query: 205 NKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGN 264
Y A++SS +++ + AE++Y+E V D +
Sbjct: 578 -----------------------YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614
Query: 265 LLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFAT 324
+LI + N+ +A+++ E M + G NS + L + Y + EA + +K +
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS 674
Query: 325 DGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSGFLENEAYASLIGL 377
+K+ P T + L + E + +++ G +A ++ +
Sbjct: 675 -CNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCM 726
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 70 KAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLIS------EMKEKNIRLDIY 123
+A LD M KG ++ + ++++ Y K+DM + E ++ NI LD
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYC------KMDMCLEALEKFKEFRDMNIFLDRV 389
Query: 124 SYNIWLSSCESIEKMEQVFE--QMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKL 181
YN+ + + ++E+ FE Q KD IVP+ ++T+ Y + A D + ++
Sbjct: 390 CYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEM 449
Query: 182 ESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDI 241
D I ++ L+S G+++EV ++ K+ P + I+ L +
Sbjct: 450 IGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKV 509
Query: 242 EGAEKLY 248
+ AE +
Sbjct: 510 KEAEDFF 516
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 46/329 (13%)
Query: 69 DKAESLLDIMRSKGYVIHSLPFNVMMTLY-MNLKEYDKVDMLISEMKEKNIRLDIYSYNI 127
++A LL M+ +G V + + ++ Y + K D +D LI EM + D+ +YN+
Sbjct: 405 EEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD-LIDEMIGNGMSPDLITYNV 463
Query: 128 WLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESR 184
+S E++ +++E+M K PN T S + + ++AED LE +
Sbjct: 464 LVSGLARNGHEEEVLEIYERM-KAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 185 IKGRDRIPFHYLLSLYGGVGNKDEVYRVW---------STYKSIFPTIPNLGYHAIVSSL 235
++ F + Y G + Y+ + S Y +F ++ GY
Sbjct: 523 CP-ENKASF---VKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGY------- 571
Query: 236 IRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNS 295
+E A + ++ + R + +IG + K +N+ +A F+ M + G +P+
Sbjct: 572 -----LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 296 NTWELLSEGYIADKRVSEALSCLKKA---FATDGSKSWKPKPLT----LSAFFKLCQDED 348
T+ ++ Y R++E L+KA F + KP +T L + KL +
Sbjct: 627 FTYTIMIHTYC---RLNE----LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 349 DTASTEILIGLLRKSGFLENEAYASLIGL 377
+T S + +G RK+ + E A+ IGL
Sbjct: 680 ETCSVQGEVG-KRKASEVLREFSAAGIGL 707
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 145/342 (42%), Gaps = 31/342 (9%)
Query: 15 FRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLNVYVHYRLKDKAESL 74
RVS S A+ AK + A +FF + + +D S+L Y ++A L
Sbjct: 216 LRVSNSILAV----YAKCGELDFATKFFRRMRE--RDVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 75 LDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSC-- 132
+ M +G + +N+++ Y L + D L+ +M+ I D++++ +S
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 133 -----ESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKG 187
++++ ++F G P V S S + + + +NQ + K+
Sbjct: 330 NGMRYQALDMFRKMF-LAGVVPNAVTIMSAVSACSCLKV-INQGSEVHSIAVKMGFI--- 384
Query: 188 RDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS--IFPTIPNLGYHAIVSSLIRIDDIEGAE 245
D + + L+ +Y G ++ +V+ + K+ ++ ++++++ + A
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT------WNSMITGYCQAGYCGKAY 438
Query: 246 KLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVP-NSNTWELLSEG 304
+L+ + N +I Y+KN + +A++ F+ M G V N+ TW L+ G
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 305 YIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQD 346
YI + + EAL +K + + P +T+ + C +
Sbjct: 499 YIQNGKKDEALELFRKMQFS----RFMPNSVTILSLLPACAN 536
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/195 (17%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 121 DIYSYNIWLSSCESIEKMEQVFEQMG-KDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLR 179
DI S+N + ++ +++VF MG PN T+ST + K + + A
Sbjct: 128 DIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFH 187
Query: 180 KLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRID 239
++ + + F L+ Y G+ + ++ + + ++ + Y A++ +
Sbjct: 188 SMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247
Query: 240 DIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWE 299
+++ AE++Y V R ++ + +I + + + D A+ F M + G + +
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 300 LLSEGYIADKRVSEA 314
++ G + ++ EA
Sbjct: 308 VIISGLCGNGKLKEA 322
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 3/187 (1%)
Query: 129 LSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGR 188
L+S ++K F M + N T + K E+A+ KL+ IK
Sbjct: 156 LASARELKKCVNYFHLMN-GFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKP- 213
Query: 189 DRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLY 248
D I + ++ + VG+ E ++W+ + I+ +L++ + + A K++
Sbjct: 214 DEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVF 273
Query: 249 EEWVSVRSSD-DARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIA 307
VS R D D ++I W KN ID A F+ M + G ++ TW L G +
Sbjct: 274 YVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLV 333
Query: 308 DKRVSEA 314
+RV EA
Sbjct: 334 KRRVVEA 340
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 131/326 (40%), Gaps = 28/326 (8%)
Query: 61 VYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRL 120
+Y R A L D M + + FN +++ Y + Y++ L E +E N++L
Sbjct: 91 MYCKCRELGFARQLFDRMPERNII----SFNSLISGYTQMGFYEQAMELFLEAREANLKL 146
Query: 121 DIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRK 180
D ++Y L C E+ + ++ +V S + + I M D
Sbjct: 147 DKFTYAGALGFCG--ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMS 204
Query: 181 LESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDD 240
L R RD++ ++ L+S Y VG +E + + + NL +A+ S+++
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA---KMHRDGLNLTTYAL-GSVLKACC 260
Query: 241 IEGAEKLYEEWVSVRSSDDARLG--------NLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
I E E+ +++ A+LG L+ Y KN ++ +A+ F M
Sbjct: 261 INLNEGFIEKGMAIHCY-TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLM------ 313
Query: 293 PNSN--TWELLSEGYIA-DKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDD 349
P+ N T+ + G++ D+ EA S K F + +P P T S K C
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 350 TASTEILIGLLRKSGFLENEAYASLI 375
+ L+ K+ F +E S +
Sbjct: 374 LEYGRQIHALICKNNFQSDEFIGSAL 399
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 115/292 (39%), Gaps = 29/292 (9%)
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
L+N+YV + L + A L D M + + + M++ Y K + K L+ M N
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 118 IRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
+R ++Y+Y+ L SC + + + + K+ + + S + ++ K+ + ED
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGE---PEDA 213
Query: 178 LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIR 237
L + + G D I ++ S+ GG +F + G+ A ++L
Sbjct: 214 LSVFDEMVTG-DAIVWN---SIIGGFAQNSRS----DVALELFKRMKRAGFIAEQATLTS 265
Query: 238 IDDIEGAEKLYEEWVS-----VRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSV 292
+ L E + V+ D L N L+ Y K +++ AL F M + +
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 293 PNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLC 344
TW + G + EAL K F S KP +T+ C
Sbjct: 326 ----TWSTMISGLAQNGYSQEAL----KLFERMKSSGTKPNYITIVGVLFAC 369
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 114/268 (42%), Gaps = 11/268 (4%)
Query: 59 LNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNI 118
LN H+R D+ L ++M S+G F +++ ++ + + +V + +MK+
Sbjct: 168 LNRNGHFRAADQ---LPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGF 224
Query: 119 RLDIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAE 175
+ ++ YN + + + V+E +D +V +TF + K + E+
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYEDFKED-GLVEESTTFMILVKGLCKAGRIEEML 283
Query: 176 DCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYK--SIFPTIPNLGYHAIVS 233
+ L+++ + D + ++ GN D RVW + I P + + Y +V
Sbjct: 284 EILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV--MAYGTLVV 341
Query: 234 SLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVP 293
L + +E +L+ E + D + +LI +V + + A N +E + D G +
Sbjct: 342 GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIA 401
Query: 294 NSNTWELLSEGYIADKRVSEALSCLKKA 321
+ + + +G + +V +A + A
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVA 429
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 134/314 (42%), Gaps = 19/314 (6%)
Query: 74 LLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-C 132
L++ MR K +++ F ++M Y ++ D+ + M++ ++ ++ ++N LS+ C
Sbjct: 156 LINAMRKKK-MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC 214
Query: 133 ES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDR 190
+S + K ++VFE M +D P+ T+S + + K KA + R++ D
Sbjct: 215 KSKNVRKAQEVFENM-RD-RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 272
Query: 191 IPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTI---PNLGYHAIVSSLIRIDDIEGAEKL 247
+ + ++ + G DE + +S+ P+I Y +V + + +E A
Sbjct: 273 VTYSIMVDILCKAGRVDEALGI---VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 248 YEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIA 307
+ E D + N LIG + K + + + M G PNS + ++ I
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 308 DKRVSEALSCLKKAFATDGSKSWKPKPLTLSAFFKLCQDEDDTASTEILIGLLRKSG-FL 366
EA +K K +P T + K+ ++ + + + + +RK G F
Sbjct: 390 RGEKDEAFDVFRKMI-----KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 367 ENEAYASLI-GLSD 379
++ LI GL +
Sbjct: 445 SMHTFSVLINGLCE 458
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 132/322 (40%), Gaps = 49/322 (15%)
Query: 58 LLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKN 117
L+ Y + L ++A+S+++ ++H LP+NV++ Y + +++V M K
Sbjct: 84 LVTFYSAFNLHNEAQSIIE----NSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKG 139
Query: 118 IRLDIYSYNIWLSSCESIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDC 177
IR D ++Y L +C E ++ F ++ V ++ + + I M + +
Sbjct: 140 IRPDAFTYPSVLKACG--ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGI 197
Query: 178 LRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVY----RVWSTYKSI------------FP 221
R+L R+ RD + ++ +++ Y G E + ++W + +
Sbjct: 198 ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 222 TIPNLGYHAIVSSL---------------IRIDDIEGAEKLYEE--WVSVRSSDDA--RL 262
T +G ++S + ++ + GA +L +E +++ SS D +
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 263 GNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAF 322
N LI Y K ++ AL F + TW + GY + EA L++
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLC----TWNSIISGYAQLNKSEEASHLLREML 373
Query: 323 ATDGSKSWKPKPLTLSAFFKLC 344
++P +TL++ LC
Sbjct: 374 VA----GFQPNSITLASILPLC 391
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 60 NVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIR 119
N +V+Y L SL D M + G + + ++ N + D L+ M ++ I+
Sbjct: 190 NGHVNYAL-----SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 120 LDIYSYNIWLSSCESIEKM---EQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAED 176
D+ ++N + + K E+++ +M + +I PN T++++ + ++A
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 177 CLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLI 236
+E++ D + + L++ + D+ +++ T + Y ++
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 237 RIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTD---GGSVP 293
++ A++++ VS + R N+L+ N + KAL FE M G P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 294 NSNTWELLSEGYIADKRVSEAL 315
N T+ +L G + ++ +AL
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKAL 445
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 12/288 (4%)
Query: 30 AKVHGVSSAERFFLNLTDNL--KDKRTHGSLLNVYVHYRLKDKAESLLDIMRSKGYVIHS 87
+KV + A R + + D+ D S+L++ + +AES+ + +R KG
Sbjct: 666 SKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDV 724
Query: 88 LPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSSCES---IEKMEQVFEQ 144
+ F MM LY + D+ + EM+E + D S+N ++ + + + ++F +
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHE 784
Query: 145 MGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVG 204
M + ++ +W TF T+ T+ K +A L+ + K +L+ +G
Sbjct: 785 MLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAI--TATLFSAMG 842
Query: 205 NKDEVYRVWSTYKSIFPTIP--NLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARL 262
Y + S + IP + Y+A++ + DI+ A K Y D
Sbjct: 843 LY--AYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
Query: 263 GNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKR 310
L+G Y K ++ +T G P+ + ++ + + Y++ R
Sbjct: 901 QAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANR 948
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/300 (18%), Positives = 129/300 (43%), Gaps = 19/300 (6%)
Query: 29 VAKVHGVSSAERFFLNLTDNLKDKR------THGSLLNVYVHYRLKDKAESLLDIMRSKG 82
+ KV S A N+ +++KR ++ S+++ + D A + + M G
Sbjct: 558 LCKVGQTSKARELLANM---IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNG 614
Query: 83 YVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS-CE--SIEKME 139
+ + + +M D+ + EMK K ++LDI +Y + C+ ++E
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 140 QVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSL 199
+F ++ ++ + P+ ++++ + + + A D +K+ +K R +L
Sbjct: 675 ALFSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDLYKKM---LKDGLRCDLGTYTTL 730
Query: 200 YGGV---GNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEWVSVRS 256
G+ GN +++ +++ + Y IV+ L + K++EE
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 257 SDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALS 316
+ + + N +I + + N+D+A + M D G +P+ T+++L G + + + A S
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAAS 850
>AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8928009-8928908 REVERSE
LENGTH=299
Length = 299
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 93 MMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYNIWLSS--------CESIEKMEQVFEQ 144
M+ LY +++D V L+ EM EK ++ + L+S + +EK +E
Sbjct: 1 MLCLYHQAEDHDMVVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVVDVQGVEKFLSKWEV 60
Query: 145 MGKDPAIVPNWSTFSTMATIYIKMNQFEKAEDCLRKLESRIK-GRDRIPFHYLLSLYGGV 203
M +D W+TF +YI+ EK LR+ E+ + G I + L+++Y
Sbjct: 61 MIQD-----KWTTFYFPGLVYIRAGFMEKGLALLRRSETFVDDGCREIIYGCLMTVYCNE 115
Query: 204 GNKDEVYRVWSTYKSIFPTIPNLGYHAIVSSLIRIDDIEGAEKLYEEW 251
++VYR+W+ K + + IV + + D++G + EEW
Sbjct: 116 NLTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKGDLDG---VMEEW 160
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 137/326 (42%), Gaps = 25/326 (7%)
Query: 2 LQVYDWMNNRQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKR-----THG 56
L V+ W N Q+ F+ + S+ ++ + K+ + +L D++K K+ T
Sbjct: 112 LSVFKWAEN-QKGFKHTTSNYNALIESLGKIKQF----KLIWSLVDDMKAKKLLSKETFA 166
Query: 57 SLLNVYVHYRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEK 116
+ Y R +A M G+ + S FN M+ + + +MK+K
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 117 NIRLDIYSYNIWLSSCE---SIEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQFEK 173
DI SY I L ++ ++++V +M KD P+ + + + K ++E+
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREM-KDEGFEPDVVAYGIIINAHCKAKKYEE 285
Query: 174 AEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYK----SIFPTIPNLGYH 229
A ++E R + H SL G+G++ ++ ++ S FP + Y+
Sbjct: 286 AIRFFNEMEQR---NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFP-LEAPTYN 341
Query: 230 AIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDG 289
A+V + +E A K +E +AR ++++ ++ +A ++ M+
Sbjct: 342 ALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS-- 399
Query: 290 GSVPNSNTWELLSEGYIADKRVSEAL 315
P +T+E++ + +R+ A+
Sbjct: 400 -CEPTVSTYEIMVRMFCNKERLDMAI 424
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 37/337 (10%)
Query: 11 RQERFRVSASDAAIQLDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLN----VYVHYR 66
R + R++ S + ++ S E D+ + HG + N ++
Sbjct: 405 RMKSVRIAPSSVLVH-TMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463
Query: 67 LKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEMKEKNIRLDIYSYN 126
D A S L +M KG + + +N MM + +K D + SEM EK + + ++Y+
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 127 IWLSSCESIEKMEQ----VFEQMGKDPAIVPNWSTFSTMATIY-------IKMNQFEKAE 175
I + K EQ V QM N S F IY K+ Q KA+
Sbjct: 524 ILIDGFFK-NKDEQNAWDVINQM--------NASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 176 DCLRKL-ESRIKGRDRIPFHYLLSLYGGVGNKD---EVYRVWS-TYKSIFPTIPN-LGYH 229
+ L+ L + + ++ ++ + VG+ D E YR S KS PN + +
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-----PNVVTFT 629
Query: 230 AIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDG 289
++++ + + ++ A ++ E S+ D LI + K +++ A F + +
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 290 GSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDG 326
G +PN + + L G+ ++ A+ KK DG
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKK-MVNDG 725
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 104 DKVDMLISEMKEKNIRLDIYSYNIWLSS-CE---SIEKMEQV--FEQMGKDPAIVPNWST 157
+++ L +EM E + DIY++N ++ C+ +E + V Q G DP ++ T
Sbjct: 137 EEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDP----DYFT 192
Query: 158 FSTMATIYIKMNQFEKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNK--DEVYRVWST 215
+++ T + + + + A +++ R+ + + L+ YG K DE +
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI--YGLFEAKKIDEALSLLVK 250
Query: 216 YKSIFPTIPNL-GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKND 274
K PN+ Y ++ +L A L+++ D + +LI + D
Sbjct: 251 MKDD-NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 275 NIDKALNFFEHMTDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKSWKPKP 334
+D+A EHM + G +PN T+ L +G+ K V +A+ L K ++ P
Sbjct: 310 TLDEASGLLEHMLENGLMPNVITYNALIKGF-CKKNVHKAMGLLSKML----EQNLVPDL 364
Query: 335 LTLSAFFKLCQDEDDTASTEILIGLLRKSGFLENE 369
+T + + S L+ L+ +SG + N+
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 120/283 (42%), Gaps = 17/283 (6%)
Query: 58 LLNVYVH----YRLKDKAESLLDIMRSKGYVIHSLPFNVMMTLYMNLKEYDKVDMLISEM 113
LLN+ V+ +R ++AE+LL G + + +N ++ Y D+ + M
Sbjct: 15 LLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM 74
Query: 114 KEKNIRLDIYSYNIWLSSCES---IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQ 170
+E I D+ +YN +S + ++ Q+F++M + P+ +++T+ + Y K+ +
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM-LHSGLSPDMWSYNTLMSCYFKLGR 133
Query: 171 FEKAEDCLRK---LESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKS-IFPTIPNL 226
+A L + L + G D ++ LL G+ D ++ KS + P + +
Sbjct: 134 HGEAFKILHEDIHLAGLVPGID--TYNILLDALCKSGHTDNAIELFKHLKSRVKPEL--M 189
Query: 227 GYHAIVSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHM 286
Y+ +++ L + + + + E + +A ++ Y K I+K L F M
Sbjct: 190 TYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 287 TDGGSVPNSNTWELLSEGYIADKRVSEALSCLKKAFATDGSKS 329
G + + I R EA C+ + G++S
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHE-LVRSGTRS 291
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 141/319 (44%), Gaps = 18/319 (5%)
Query: 3 QVYDWMNNRQERFRVSASDAAIQ--LDLVAKVHGVSSAERFFLNLTDNLKDKRTHGSLLN 60
+V + N Q RV S AI L+L+ V+ + + L NL + + + N
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNL-GLQPNTCIFN 200
Query: 61 VYVHYRLKDK----AESLLDIMRSKGYVI-HSLPFNVMM-TLYMNLKEYDKVDMLISEMK 114
+ V + K+ A +++ M+ G +S+ ++ +M L+ + + + V++ +
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 115 EKNIRLDIYSYNIWLSS-CES--IEKMEQVFEQMGKDPAIVPNWSTFSTMATIYIKMNQF 171
++ I D ++N+ ++ C + +E+ +++ + M K+ PN +S + + K+ +
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKN-GCNPNVYNYSALMNGFCKVGKI 319
Query: 172 EKAEDCLRKLESRIKGRDRIPFHYLLSLYGGVGNKDEVYRVWSTYKSIFPTIPNLGYHAI 231
++A+ +++ D + + L++ + G DE ++ K+ L Y+ I
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 232 VSSLIRIDDIEGAEKLYEEWVSVRSSDDARLGNLLIGWYVKNDNIDKALNFFEHMTDGGS 291
+ L E A ++ ++W S + +++ N ++KA+ F M++ G
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 292 VPNSNTW-----ELLSEGY 305
P+ TW L GY
Sbjct: 440 WPHHATWNELVVRLCESGY 458