Miyakogusa Predicted Gene

Lj3g3v0595270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0595270.1 Non Chatacterized Hit- tr|I1KJF5|I1KJF5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,84.44,0.00000007,seg,NULL,CUFF.41005.1
         (60 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02145.1 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...    48   1e-06
AT1G02145.3 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...    48   1e-06
AT1G02145.4 | Symbols: ALG12, EBS4 | homolog of asparagine-linke...    48   2e-06

>AT1G02145.1 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=493
          Length = 493

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 24/27 (88%)

Query: 21  TITTFMASYWNYPSGHALKKMHGIGEP 47
           T+ TFMASY+NYPSG+ALK++H IG P
Sbjct: 358 TVVTFMASYYNYPSGYALKRLHQIGHP 384


>AT1G02145.3 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404627-408485 FORWARD LENGTH=497
          Length = 497

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 24/27 (88%)

Query: 21  TITTFMASYWNYPSGHALKKMHGIGEP 47
           T+ TFMASY+NYPSG+ALK++H IG P
Sbjct: 362 TVVTFMASYYNYPSGYALKRLHQIGHP 388


>AT1G02145.4 | Symbols: ALG12, EBS4 | homolog of asparagine-linked
           glycosylation 12 | chr1:404915-408485 FORWARD LENGTH=453
          Length = 453

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/27 (70%), Positives = 24/27 (88%)

Query: 21  TITTFMASYWNYPSGHALKKMHGIGEP 47
           T+ TFMASY+NYPSG+ALK++H IG P
Sbjct: 318 TVVTFMASYYNYPSGYALKRLHQIGHP 344