Miyakogusa Predicted Gene
- Lj3g3v0594250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0594250.1 CUFF.40997.1
(413 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 345 3e-95
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 202 4e-52
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 200 2e-51
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 5e-51
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 194 7e-50
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 194 8e-50
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 191 6e-49
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 8e-48
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 5e-47
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 184 1e-46
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 181 6e-46
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 5e-45
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 8e-45
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 176 3e-44
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 7e-44
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 9e-44
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 172 3e-43
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 8e-43
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 5e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 166 3e-41
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 5e-41
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 7e-41
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 7e-41
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 8e-41
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 8e-41
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 164 1e-40
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 2e-40
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 9e-40
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 161 1e-39
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 159 4e-39
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 6e-39
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 157 2e-38
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 156 2e-38
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 2e-38
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 156 3e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 3e-38
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 155 4e-38
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 155 4e-38
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 5e-38
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 154 8e-38
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 154 1e-37
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 154 2e-37
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 154 2e-37
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 7e-37
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 7e-37
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 8e-37
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 9e-37
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 150 2e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 149 4e-36
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 148 6e-36
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 9e-36
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 147 1e-35
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 4e-35
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 6e-35
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 2e-34
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 143 3e-34
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 8e-34
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 2e-33
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 5e-33
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 138 7e-33
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 5e-32
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 1e-31
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 6e-31
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 125 7e-29
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 3e-28
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 7e-28
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 119 4e-27
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 119 4e-27
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 7e-27
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 117 2e-26
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 7e-25
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 110 1e-24
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 103 2e-22
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 2e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 78 1e-14
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 77 2e-14
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 74 1e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 72 7e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 69 9e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 1e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 4e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 2e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 8e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 8e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 8e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 2e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 56 4e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 56 5e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 1e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 3e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 5e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 7e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 7e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 345 bits (885), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/329 (51%), Positives = 235/329 (71%), Gaps = 1/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S LI L+ K G++ R+VF S +R+ +W A++SG A NG +AL + M +EG R
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T+ +LP+CA+LR +KQGKE+H YALK FLP+V++V+SLMVMYSKCGV Y IRL
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD +E++NV WTAMID VEN L + V R M L++ R D+VT+ R+L VC +L+ +
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKAL 535
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
KLGKE+HG +LK F S+ +V+A +I MYG CG +A F AV KGS+TWTA+I AY
Sbjct: 536 KLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAY 595
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
G E +R+AI+ F+ M+S G +PNTFTF AVLSIC +AGFV++A+RFF+LM Y ++ S
Sbjct: 596 GCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPS 655
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+EH + +++LL R G+++EAQR MS S
Sbjct: 656 EEHYSLVIELLNRCGRVEEAQRLAVMSSS 684
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 150/280 (53%), Gaps = 6/280 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPR--EALEYVRLMLEEG 142
+ L+ ++ G+V A++VF+ES +V +WNA++ G +G R + L M E G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
N ++ + A L+QG + HA A+K V + +SL+ MY KCG +G +
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR--ADTVTLTRMLCVCGE 260
R+FD + ++++++W AMI N EAL + R+M ++ ++ ++V LT +L V G+
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGD 328
Query: 261 LRRVKLGKEVHGQVLK-LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
++ +KLGKEVH VLK + +V + LI++Y CG + + VF + +++WTA
Sbjct: 329 VKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTA 388
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
L+ Y + +A+ M G P+ T VL +C
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC 428
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 3/231 (1%)
Query: 131 ALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV 190
AL + + + G N T +L C + ++L GK+VH + + + + L+
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 191 MYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG--FLNEALAVMRSMQLTRQRADT 248
MY+ CG + + ++FD NV W A++ V +G + L+ M+ +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
+L+ + ++ G + H +K G + ++ L++MY CG A+ VF
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS-NGCSPNTFTFEAVLSI 358
+ ++ + W A+I + + EA+ LF M+S PN+ +L +
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
L AL ++ ++ + T + +L C + + GK+VH + G S ++ +
Sbjct: 92 LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTK 151
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA--YGYKEWYREAIDLFDLMMSNGCS 346
L++MY ACG +A+ VF +W AL+R K+ Y++ + F M G
Sbjct: 152 LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVD 211
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRF 406
N ++ V A + + L + S T +V + + GK+ A+R
Sbjct: 212 LNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRV 271
Query: 407 LE 408
+
Sbjct: 272 FD 273
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 182/328 (55%), Gaps = 4/328 (1%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SLI ++ K G V AR++F+E R +WN+MISG + G+ ++A++ R M EEG P
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ T++ +L C+ L L+ G+ + A+ ++ + S L+ MY KCG + + R+F
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ M KK+ + WTAMI +NG +EA + M+ T D TL+ +L CG + ++
Sbjct: 292 NQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALE 351
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
LGK++ +L YVA L++MYG CG + A VF A+P K TW A+I AY
Sbjct: 352 LGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYA 411
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASK 384
++ +EA+ LFD M P+ TF VLS C AG V R+F MS+ + +
Sbjct: 412 HQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKI 468
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
EH T ++ LL+R G LDEA F+E P
Sbjct: 469 EHYTNIIDLLSRAGMLDEAWEFMERFPG 496
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 164/335 (48%), Gaps = 13/335 (3%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEG 142
P+ LI + G+ + + +F + + ++N MI GL + EA L R M G
Sbjct: 68 PNFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSG 127
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ T + CAKL + G+ VH+ K V + SL++MY+KCG +GY+
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+LFD + +++ + W +MI E G+ +A+ + R M+ D TL ML C L
Sbjct: 188 KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 263 RVKLGKEVHGQVL--KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
++ G+ + + K+G ++ ++ ++LI+MYG CG D+A+ VF + K + WTA+
Sbjct: 248 DLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
I Y EA LF M G SP+ T VLS C G A + T+
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG----ALELGKQIETHAS 361
Query: 381 EASKEH----CTFMVQLLTRYGKLDEAQRFLEMSP 411
E S +H T +V + + G+++EA R E P
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S LI ++ K G++D AR+VF + ++ AW AMI+ + NG EA + M + G
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +L C + L+ GK++ +A + ++ + + L+ MY KCG + ++R+
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
F+ M KN W AMI + G EAL + M + +T +L C
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVP---PSDITFIGVLSAC 442
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 177/320 (55%), Gaps = 6/320 (1%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G ++ A Q+F + SVS W AMI GLA NG +EA+E R M +G + + +L
Sbjct: 219 GMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
P C L + +GK++HA ++ F H+ + S+L+ MY KC + Y+ +FD M++KNV+
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
WTAM+ + G EA+ + MQ + D TL + + C + ++ G + HG+
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 275 LKLGFASVHY--VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+ G +HY V+ L+ +YG CG D++ +F + + +++WTA++ AY E
Sbjct: 398 ITSGL--IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMV 391
I LFD M+ +G P+ T V+S C RAG VE R+F LM S Y I S H + M+
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 392 QLLTRYGKLDEAQRFLEMSP 411
L +R G+L+EA RF+ P
Sbjct: 516 DLFSRSGRLEEAMRFINGMP 535
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 160/359 (44%), Gaps = 34/359 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
++L+ + K G + FE+ P R WN +I G + +G A++ Y +M +
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK--------- 194
+T+M +L + + + GK++H +K F ++ + S L+ MY+
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 195 ----------------------CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEA 232
CG+I +++LF GMEK +V W AMI +NG EA
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEA 254
Query: 233 LAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
+ R M++ + D +L CG L + GK++H +++ F YV + LI+M
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y C AK VF + K ++WTA++ YG EA+ +F M +G P+ +T
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 353 EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQR-FLEMS 410
+S C +E+ +F T + +V L + G +D++ R F EM+
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN 433
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 14/247 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI ++ K + A+ VF+ +++V +W AM+ G G EA++ M G
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ + CA + +L++G + H A+ + +VT+ +SL+ +Y KCG I S RL
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL--- 261
F+ M ++ + WTAM+ + + G E + + M + D VTLT ++ C
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 262 ----RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMT 316
R KL +G V +G HY +I+++ G + A +P ++
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIG----HYSC--MIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 317 WTALIRA 323
WT L+ A
Sbjct: 543 WTTLLSA 549
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 52/247 (21%)
Query: 169 VHAYAL------KRRFL-----PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT 217
VHAYAL RR P++ ++L++ YSK G+I F+ + ++ + W
Sbjct: 48 VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWN 107
Query: 218 AMIDSCVENGFLNEALAVMRSM------QLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+I+ +G + A+ +M LTR VTL ML + V LGK++H
Sbjct: 108 VLIEGYSLSGLVGAAVKAYNTMMRDFSANLTR-----VTLMTMLKLSSSNGHVSLGKQIH 162
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD-------------------- 311
GQV+KLGF S V + L+ MY G +AK VF + D
Sbjct: 163 GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIE 222
Query: 312 ----------KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
K S++W A+I+ +EAI+ F M G + + F +VL C
Sbjct: 223 DALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG 282
Query: 362 AGFVEDA 368
G + +
Sbjct: 283 LGAINEG 289
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 178/329 (54%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFE--ESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
+ LI L+ K + AR VFE P R++ +W A++S A NG P EALE M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+W+ ++ +L L+ LKQG+ +HA +K ++ SL MY+KCG + +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
LFD M+ N+ILW AMI +NG+ EA+ + M R DT+++T + C ++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++ + ++ V + + ++++ LI+M+ CG + A+LVF D+ + W+A+I
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
YG REAI L+ M G PN TF +L C+ +G V + + FF+ M+ ++I
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
++H ++ LL R G LD+A ++ P
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 158/322 (49%), Gaps = 2/322 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI G++ ARQVF++ PR + WNA+I G + N ++AL M
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +L C+ L L+ G+ VHA + F V + + L+ +Y+KC +G + +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 205 FDG--MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
F+G + ++ ++ WTA++ + +NG EAL + M+ + D V L +L L+
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+K G+ +H V+K+G + L MY CG AK++F + + W A+I
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
Y + REAID+F M++ P+T + + +S C + G +E A ++ + +
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 383 SKEHCTFMVQLLTRYGKLDEAQ 404
+ ++ + + G ++ A+
Sbjct: 357 DVFISSALIDMFAKCGSVEGAR 378
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
Query: 165 QGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCV 224
Q K++HA L +++ L+ S G I ++ ++FD + + + W A+I
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
N +AL + +MQL R D+ T +L C L +++G+ VH QV +LGF + +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 285 VAAELINMYGACGVFDNAKLVFGA--VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
V LI +Y C +A+ VF +P++ ++WTA++ AY EA+++F M
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 343 NGCSPNTFTFEAVLS 357
P+ +VL+
Sbjct: 216 MDVKPDWVALVSVLN 230
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K++H ++L LG ++ +LI+ + G A+ VF +P W A+IR Y
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+++A+ ++ M SP++FTF +L C
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 183/337 (54%), Gaps = 10/337 (2%)
Query: 82 NDP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
DP + LI ++ G+VD AR+VF+++ +R++ WNA+ L G E L M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 139 LEEGKRPNWITMMVILPICA----KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK 194
G + T +L C + L +GKE+HA+ +R + HV ++++L+ MY++
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 195 CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM--QLTRQRADTVTLT 252
G + Y+ +F GM +NV+ W+AMI +NG EAL R M + ++VT+
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 253 RMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+L C L ++ GK +HG +L+ G S+ V + L+ MYG CG + + VF + D+
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
++W +LI +YG + ++AI +F+ M++NG SP TF +VL C G VE+ R F
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 373 DLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ M + I+ EH MV LL R +LDEA + ++
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 10/299 (3%)
Query: 116 NAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALK 175
N +I L G ++A+ +L + P+ T +++ C +L VH + L
Sbjct: 50 NQLIQSLCKEGKLKQAIR----VLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 176 RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
+ + L+ MYS G + Y+ ++FD K+ + +W A+ + G E L +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 236 MRSMQLTRQRADTVTLTRML--CVCGE--LRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
M +D T T +L CV E + + GKE+H + + G++S Y+ L++
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 292 MYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM--SNGCSPNT 349
MY G D A VFG +P + ++W+A+I Y EA+ F MM + SPN+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
T +VL C +E + +++ + +V + R GKL+ QR +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFD 344
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 180/325 (55%), Gaps = 2/325 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SL ++ + G ++ AR+VF++ R ++WN +I+GLA+NG+ EA+ M G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ I++ +L K L QG ++H+Y +K FL +T+ +SL+ MY+ C + LF
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLF 429
Query: 206 -DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
D + + W ++ +C+++ E L + + M ++ D +T+ +L C E+ +
Sbjct: 430 EDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSL 489
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
KLG +VH LK G A ++ LI+MY CG A+ +F ++ ++ ++W+ LI Y
Sbjct: 490 KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGY 549
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEAS 383
+ EA+ LF M S G PN TF VL+ C G VE+ + + M T + I +
Sbjct: 550 AQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPT 609
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLE 408
KEHC+ +V LL R G+L+EA+RF++
Sbjct: 610 KEHCSCVVDLLARAGRLNEAERFID 634
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ ++ K G++ AR+VF+ P R++ ++ ++I+G + NG EA+ ML+E P+
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
I+ CA + GK++HA +K H+ ++L+ MY + + + R+F
Sbjct: 168 QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFY 227
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVK 265
G+ K++I W+++I + GF EAL+ ++ M + L C L R
Sbjct: 228 GIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 287
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
G ++HG +K A L +MY CG ++A+ VF + + +W +I
Sbjct: 288 YGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
+ EA+ +F M S+G P+ + ++L
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 2/277 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++LI ++ + + A +VF P + + +W+++I+G + GF EAL +++ ML G
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN L C+ L G ++H +K + SL MY++CG + + R
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD +E+ + W +I NG+ +EA++V M+ + D ++L +LC +
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACG-VFDNAKLVFGAVPDKGSMTWTALIR 322
+ G ++H ++K GF + V L+ MY C ++ L + S++W ++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
A E E + LF LM+ + C P+ T +L C
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 4/296 (1%)
Query: 116 NAMISGLAHNGFPREALEYVRLMLEEGK-RPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
N I+ L + F REALE + + T + ++ C+ R+L QG+++H + L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALA 234
+ + ++ MY KCG + + +FD M ++N++ +T++I +NG EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 235 VMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE-LINMY 293
+ M D ++ C V LGK++H QV+KL +S H +A LI MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE-SSSHLIAQNALIAMY 213
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC-SPNTFTF 352
+A VF +P K ++W+++I + + EA+ M+S G PN + F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 353 EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ L C + + L E+ + + + R G L+ A+R +
Sbjct: 274 GSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFD 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI ++ K G++ AR++F+ R V +W+ +I G A +GF EAL + M G
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL-PHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T + +L C+ + +++G +++A + P S ++ + ++ G + + R
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 204 LFDGME-KKNVILWTAMIDSCVENG 227
D M+ + +V++W ++ +C G
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQG 656
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 187/326 (57%), Gaps = 1/326 (0%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++L+ ++ K +++ A ++F+ S R+ W+AM++G + NG EA++ M G
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ T++ +L C+ + L++GK++H++ LK F H+ ++L+ MY+K G + + +
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
FD +++++V LWT++I V+N EAL + R M+ + T+ +L C L
Sbjct: 379 GFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLAT 438
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++LGK+VHG +K GF + + L MY CG ++ LVF P+K ++W A+I
Sbjct: 439 LELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISG 498
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEA 382
+ EA++LF+ M++ G P+ TF ++S C GFVE + +F++MS ++
Sbjct: 499 LSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP 558
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLE 408
+H MV LL+R G+L EA+ F+E
Sbjct: 559 KVDHYACMVDLLSRAGQLKEAKEFIE 584
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 4/285 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML---EE 141
+SL+ ++ K G V+ +VF P R+ W+ M+SG A G EA++ L L EE
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G +++ V+ + A + + G+++H +K L V + ++L+ MYSKC + +
Sbjct: 217 GSDSDYVFTAVLSSLAATIY-VGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEA 275
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
++FD +N I W+AM+ +NG EA+ + M + T+ +L C ++
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDI 335
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++ GK++H +LKLGF + L++MY G +A+ F + ++ WT+LI
Sbjct: 336 CYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLI 395
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
Y EA+ L+ M + G PN T +VL C +E
Sbjct: 396 SGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 146/324 (45%), Gaps = 5/324 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA---LEYVRLMLEEGK 143
L+ + K G + A +F + V +WN++I+G + NG + ++ R M +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T+ I + L++ G++ HA +K + + +SL+ MY K G++ ++
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT--VTLTRMLCVCGEL 261
+F M ++N W+ M+ G + EA+ V ++ T +L
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
V LG+++H +K G ++ L+ MY C + A +F + D+ S+TW+A++
Sbjct: 235 IYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 294
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y EA+ LF M S G P+ +T VL+ C ++E+ + + E
Sbjct: 295 TGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQR 405
T +V + + G L +A++
Sbjct: 355 RHLFATTALVDMYAKAGCLADARK 378
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 5/218 (2%)
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T++ L ++ R L G+ VH ++ + + L+ Y+KCG + + +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVM---RSMQLTRQRADTVTLTRMLCVCGEL 261
F+ + K+V+ W ++I +NG ++ + VM R M+ + TL + L
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ +G++ H V+K+ YV L+ MY G+ ++ VF +P++ + TW+ ++
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 322 RAYGYKEWYREAIDLFDLMM--SNGCSPNTFTFEAVLS 357
Y + EAI +F+L + S + + F AVLS
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLS 229
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN 301
T T TL + L + R + G+ VHGQ+++ G ++ A L+N Y CG
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 302 AKLVFGAVPDKGSMTWTALIRAY----GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
A +F A+ K ++W +LI Y G Y + LF M + PN +T +
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYT-VMQLFREMRAQDILPNAYTLAGIF 125
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 172/312 (55%), Gaps = 1/312 (0%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
+D R+VFE PR+ V ++N +I+G A +G +AL VR M +P+ T+ +LPI
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
++ + +GKE+H Y +++ V + SSL+ MY+K I S R+F + ++ I W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
+++ V+NG NEAL + R M + + V + ++ C L + LGK++HG VL+
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
GF S ++A+ L++MY CG A+ +F + ++WTA+I + EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLT 395
F+ M G PN F AVL+ C G V++A+ +F+ M+ Y + EH + LL
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 396 RYGKLDEAQRFL 407
R GKL+EA F+
Sbjct: 492 RAGKLEEAYNFI 503
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K ++ + +VF R +WN++++G NG EAL R M+ +
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P + ++P CA L TL GK++H Y L+ F ++ + S+L+ MYSKCG I + ++
Sbjct: 341 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKI 400
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
FD M + + WTA+I +G +EA+++ M+ + + V +L C +
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
++++ Q K++HA ++ + L H T S ++ +Y+ ++ ++ LF ++ V+ W +
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSH-TSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
+I + ++ALA M+ + + D +L C + ++ G+ VHG +++LG
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 279 FASVHYVAAELINMYGAC----------GVF--------------------------DNA 302
Y L+NMY VF D+
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
+ VF +P K +++ +I Y Y +A+ + M + P++FT +VL I
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 182/329 (55%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G++D A+ VF E RSV ++ +MI+G A G EA++ M EEG
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +L CA+ R L +GK VH + + + + ++LM MY+KCG + + +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
F M K++I W +I +N + NEAL++ + + R D T+ +L C L
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
G+E+HG +++ G+ S +VA L++MY CG A ++F + K ++WT +I
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
YG + +EAI LF+ M G + +F ++L C +G V++ +RFF++M +IE
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EH +V +L R G L +A RF+E P
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMP 663
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K VD AR+VF+E R V +WN++I+G NG + L ML G
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T++ + CA R + G+ VH+ +K F ++L+ MYSKCG + + +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M ++V+ +T+MI G EA+ + M+ D T+T +L C R +
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK VH + + +V+ L++MY CG A+LVF + K ++W +I Y
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 325 GYKEWYREAIDLFDLMMSNG-CSPNTFTFEAVLSIC 359
+ EA+ LF+L++ SP+ T VL C
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 159/323 (49%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N S L ++ G++ A +VF+E WN +++ LA +G ++ + M+
Sbjct: 130 NLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G + T + + LR++ G+++H + LK F ++ +SL+ Y K + +
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSA 249
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
++FD M +++VI W ++I+ V NG + L+V M ++ D T+ + C +
Sbjct: 250 RKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
R + LG+ VH +K F+ L++MY CG D+AK VF + D+ +++T++I
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y + EA+ LF+ M G SP+ +T AVL+ C R +++ R + + ++
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQ 404
++ + + G + EA+
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAE 452
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 139/307 (45%), Gaps = 11/307 (3%)
Query: 110 RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI----TMMVILPICAKLRTLKQ 165
RSV+ N + +G A V+L+ GK W T+ +L +CA ++LK
Sbjct: 59 RSVTDANTQLRRFCESGNLENA---VKLLCVSGK---WDIDPRTLCSVLQLCADSKSLKD 112
Query: 166 GKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVE 225
GKEV + F+ + S L +MY+ CG + + R+FD ++ + + W +++ +
Sbjct: 113 GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 226 NGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
+G + ++ + + M + D+ T + + LR V G+++HG +LK GF + V
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSV 232
Query: 286 AAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
L+ Y D+A+ VF + ++ ++W ++I Y + + +F M+ +G
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 346 SPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
+ T +V + C + + + C ++ + ++ G LD A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 406 -FLEMSP 411
F EMS
Sbjct: 353 VFREMSD 359
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 182/360 (50%), Gaps = 33/360 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI +F G++D A +VF + V +WN+MI+G G P +ALE + M E +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +TM+ +L CAK+R L+ G++V +Y + R ++T+ ++++ MY+KCG I + RL
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 205 FDGMEKKNVILWTAMIDSCV-------------------------------ENGFLNEAL 233
FD ME+K+ + WT M+D +NG NEAL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 234 AVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
V +QL + + + +TL L C ++ ++LG+ +H + K G +V + LI+M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y CG + ++ VF +V + W+A+I EA+D+F M PN TF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 353 EAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
V C G V++A F M S Y I ++H +V +L R G L++A +F+E P
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREAL-EYVRLMLEEGKRPNWITMMVI 153
+++ AR+VF+E P+ + AWN +I A P ++ ++ ++ E PN T +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
+ A++ +L G+ +H A+K V + +SL+ Y CG + + ++F +++K+V
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ W +MI+ V+ G ++AL + + M+ +A VT+ +L C ++R ++ G++V
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA 333
+ + +A +++MY CG ++AK +F A+ +K ++TWT ++ Y E Y A
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
++ + M + + A++S ++ G +A F
Sbjct: 318 REVLNSMPQK----DIVAWNALISAYEQNGKPNEALIVF 352
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREAL-EYVRLMLEEGKRPNWITMMVIL 154
+ + AR+V P++ + AWNA+IS NG P EAL + L L++ + N IT++ L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
CA++ L+ G+ +H+Y K + + S+L+ MYSKCG + S +F+ +EK++V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV-HGQ 273
+W+AMI +G NEA+ + MQ + + VT T + C C V + + H
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTALIRA 323
G A ++++ G G + A A+P S + W AL+ A
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 10/257 (3%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVM--YSKCGVIGYSIRLFDGMEKKNVI 214
C LR LKQ H + ++ S L M S + Y+ ++FD + K N
Sbjct: 40 CVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQR---ADTVTLTRMLCVCGELRRVKLGKEVH 271
W +I + + L++ + + + + T ++ E+ + LG+ +H
Sbjct: 97 AWNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G +K S +VA LI+ Y +CG D+A VF + +K ++W ++I + K
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMV 391
+A++LF M S + T VLS C + +E + + + + M+
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 392 QLLTRYGKLDEAQRFLE 408
+ T+ G +++A+R +
Sbjct: 275 DMYTKCGSIEDAKRLFD 291
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 174/328 (53%), Gaps = 1/328 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K +++AR+VF++ PR+S+ AWN+MI G G + +E + M+ EG R
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ IL C++ R L GK +H Y ++ + + SL+ +Y KCG + +
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +K W MI S + G +A+ V M + D VT T +L C +L +
Sbjct: 367 FSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAAL 426
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ GK++H + + + + + L++MY CG A +F ++P K ++WT +I AY
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
G REA+ FD M G P+ T AVLS C AG +++ +FF M S Y IE
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPI 546
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH + M+ +L R G+L EA ++ +P
Sbjct: 547 IEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 165/328 (50%), Gaps = 2/328 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K + + QVF+E P R V++WN +IS +G +ALE M G
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +++ V + C++L L++GKE+H +K+ F + S+L+ MY KC + + +
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M +K+++ W +MI V G + ++ M + R TLT +L C R +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK +HG V++ + YV LI++Y CG + A+ VF + +W +I +Y
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385
Query: 325 -GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
W++ A++++D M+S G P+ TF +VL C + +E + +S +E
Sbjct: 386 ISVGNWFK-AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ + ++ + ++ G EA R P
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRS-VSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
SLI ++F + AR VFE RS V WN+++SG + N + LE + RL+
Sbjct: 44 SLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSIC 103
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ T ++ L G+ +H +K ++ V + SSL+ MY+K + S++
Sbjct: 104 VPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQ 163
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD M +++V W +I ++G +AL + M+ + ++V+LT + C L
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ GKE+H + +K GF YV + L++MYG C + A+ VF +P K + W ++I+
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
Y K + +++ + M+ G P+ T ++L C R+
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME-KKNVILWTAM 219
++L++ K VH L V + SL+ +Y C + +F+ + + +V +W ++
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 220 IDSCVENGFLNEALAVM-RSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
+ +N ++ L V R + + D+ T ++ G L R LG+ +H V+K G
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSG 137
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
+ VA+ L+ MY +F+N+ VF +P++ +W +I + +A++LF
Sbjct: 138 YVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG 197
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVE 366
M S+G PN+ + +S C R ++E
Sbjct: 198 RMESSGFEPNSVSLTVAISACSRLLWLE 225
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 178/331 (53%), Gaps = 1/331 (0%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N ++L+ ++ K G+++ ARQ+F+ R+V +WN+MI N P+EA+ + ML+E
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G +P +++M L CA L L++G+ +H +++ +V++V+SL+ MY KC + +
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+F ++ + ++ W AMI +NG +AL M+ + DT T ++ EL
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
K +HG V++ +V L++MY CG A+L+F + ++ TW A+I
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
YG + + A++LF+ M PN TF +V+S C +G VE + F +M Y I
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSI 571
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
E S +H MV LL R G+L+EA F+ P
Sbjct: 572 ELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 156/273 (57%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L ++ K V+ AR+VF+ P R + +WN +++G + NG R ALE V+ M EE +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P++IT++ +LP + LR + GKE+H YA++ F V + ++L+ MY+KCG + + +L
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FDGM ++NV+ W +MID+ V+N EA+ + + M + V++ L C +L +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G+ +H ++LG V LI+MY C D A +FG + + ++W A+I +
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+A++ F M S P+TFT+ +V++
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVIT 446
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ L + G+VD A +VFE + ++ M+ G A +AL++ M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P +L +C L+ GKE+H +K F + ++ L MY+KC + + ++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +++++ W ++ +NG AL +++SM + +T+ +L LR +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+GKE+HG ++ GF S+ ++ L++MY CG + A+ +F + ++ ++W ++I AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST 377
E +EA+ +F M+ G P + L C G +E RF +S
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSV 364
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
++L C+ L+ L+Q + K + L+ ++ + G + + R+F+ ++ K
Sbjct: 42 LLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+L+ M+ + L++AL M+ T +L VCG+ +++GKE+H
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G ++K GF+ + L NMY C + A+ VF +P++ ++W ++ Y R
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVL 356
A+++ M P+ T +VL
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVL 243
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 5/332 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G +D AR VF+ RR V W MI+G +G ALE RLM EG R
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T+ ++ +C + GK +H +A++++ + + +SL+ MY+KC + R+
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F G K + W+A+I CV+N +++AL + + M+ + TL +L L +
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTAL 320
+ +H + K GF S A L+++Y CG ++A +F + +K + W AL
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
I YG A+ +F M+ +G +PN TF + L+ C +G VE+ F M Y+
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYK 556
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
A H T +V LL R G+LDEA + P
Sbjct: 557 TLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 159/323 (49%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ G V++AR VF+ R V +WN MISG NG+ +AL M+ E
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T++ +LP+C L+ L+ G+ VH ++R + + ++L+ MY KCG + + +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD ME+++VI WT MI+ E+G + AL + R MQ R + VT+ ++ VCG+ +V
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK +HG ++ S + LI+MY C D VF + W+A+I
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
E +A+ LF M PN T ++L + A ++ +S
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 385 EHCTFMVQLLTRYGKLDEAQRFL 407
+ T +V + ++ G L+ A +
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIF 478
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 2/276 (0%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR--PNWITMMV 152
G++ AR++FEE P+ S+ ++N +I G +A+ M+ EG + P+ T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+ +L+++K G VH L+ F + ++L+ MY G + + +FD M+ ++
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
VI W MI NG++N+AL + M D T+ ML VCG L+ +++G+ VH
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
V + V L+NMY CG D A+ VF + + +TWT +I Y
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA 368
A++L LM G PN T +++S+C A V D
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 122/250 (48%), Gaps = 5/250 (2%)
Query: 158 AKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
A +++ + K +H + + R H+ +S+L V Y+ CG I Y+ +LF+ M + +++ +
Sbjct: 26 AATQSISKTKALHCHVITGGRVSGHI--LSTLSVTYALCGHITYARKLFEEMPQSSLLSY 83
Query: 217 TAMIDSCVENGFLNEALAVMRSM--QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
+I V G ++A++V M + + D T + GEL+ +KLG VHG++
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
L+ F YV L+ MY G + A+ VF + ++ ++W +I Y + +A+
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLL 394
+FD M++ + T ++L +C +E L+ + E +V +
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 395 TRYGKLDEAQ 404
+ G++DEA+
Sbjct: 264 LKCGRMDEAR 273
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 164/311 (52%), Gaps = 6/311 (1%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRPNWITMMVILPICA 158
AR+VF+E P V W A++S + N EAL M +G P+ T +L C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
LR LKQGKE+H + +V + SSL+ MY KCG + + ++F+GM KKN + W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
++ +NG +A+ + R M+ D +L C L V+LGKE+HGQ ++ G
Sbjct: 337 LLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
V + LI++YG G D+A V+ + + +TW A++ A EA+ F+
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRY 397
M+ G P+ +F A+L+ C G V++ +F LM+ +Y I+ EH + M+ LL R
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 398 GKLDEAQRFLE 408
G +EA+ LE
Sbjct: 513 GLFEEAENLLE 523
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 82 NDPSSLIQLHFKRG-NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
N +SL+ L+FK G + R+VF+ + +W +M+SG +ALE M+
Sbjct: 97 NVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVS 156
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G N T+ + C++L ++ G+ H + F + + S+L +Y
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA-DTVTLTRMLCVCG 259
+ R+FD M + +VI WTA++ + +N EAL + +M + D T +L CG
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
LRR+K GKE+HG+++ G S V + L++MYG CG A+ VF + K S++W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 320 LIRAYGYKEWYREAIDLFDLM-------------------------------MSNGCSPN 348
L+ Y + +AI++F M + GC N
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
A++ + ++G ++ A R + MS + M+ L + G+ +EA F
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNA----MLSALAQNGRGEEAVSFF 451
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 9/222 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K G+V ARQVF +++ +W+A++ G NG +A+E R M E+
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK--- 360
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +L CA L ++ GKE+H ++R +V + S+L+ +Y K G I + R+
Sbjct: 361 -DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ M +N+I W AM+ + +NG EA++ M + D ++ +L CG V
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 265 KLGKE---VHGQVLKLGFASVHYVAAELINMYGACGVFDNAK 303
G+ + + + + HY +I++ G G+F+ A+
Sbjct: 480 DEGRNYFVLMAKSYGIKPGTEHYSC--MIDLLGRAGLFEEAE 519
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 2/209 (0%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV-IGYSIRLFDGMEKK 211
+L C K+ + G + HA+ +K + +SL+ +Y K G + + R+FDG K
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+ I WT+M+ V +AL V M A+ TL+ + C EL V+LG+ H
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G V+ GF H++++ L +YG +A+ VF +P+ + WTA++ A+ + Y
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 332 EAIDLFDLMM-SNGCSPNTFTFEAVLSIC 359
EA+ LF M G P+ TF VL+ C
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI L+ K G +D A +V+ + R++ WNAM+S LA NG EA+ + M+++G +
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 145 PNWITMMVILPICAKLRTLKQGKE-----VHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
P++I+ + IL C + +G+ +Y +K P S ++ + + G+
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK----PGTEHYSCMIDLLGRAGLFE 516
Query: 200 YSIRLFDGMEKKN-VILWTAMIDSCVEN 226
+ L + E +N LW ++ C N
Sbjct: 517 EAENLLERAECRNDASLWGVLLGPCAAN 544
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
G L EA+ ++ S + A +L C ++ G + H V+K G + V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 287 AELINMYGACGV-FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
L+++Y G + VF K +++WT+++ Y + + +A+++F M+S G
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 346 SPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
N FT + + C G V F ++ T+ E
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFE 195
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 177/329 (53%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI +FK V +A+ +F + V + AMISG HNG ++LE R +++
Sbjct: 379 SALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN IT++ ILP+ L LK G+E+H + +K+ F + +++ MY+KCG + + +
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + K++++ W +MI C ++ + A+ + R M ++ D V+++ L C L
Sbjct: 499 FERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSE 558
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK +HG ++K AS Y + LI+MY CG A VF + +K ++W ++I A
Sbjct: 559 SFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAAC 618
Query: 325 GYKEWYREAIDLFDLMM-SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEA 382
G ++++ LF M+ +G P+ TF ++S C G V++ RFF M+ Y I+
Sbjct: 619 GNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQP 678
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+EH +V L R G+L EA ++ P
Sbjct: 679 QQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G D A ++F R WN MISG +G E+L + M+ G
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IT +LP +K L+ K++H Y ++ + + S+L+ Y KC + + +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +V+++TAMI + NG ++L + R + + + +TL +L V G L +
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
KLG+E+HG ++K GF + + +I+MY CG + A +F + + ++W ++I
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ AID+F M +G + + A LS C
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 132/274 (48%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI+ + + G +D+ ++F+ ++ WN M++G A G ++ +M +
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQIS 236
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T +L +CA + G ++H + ++ +SL+ MYSKCG + +L
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKL 296
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M + + + W MI V++G + E+L M + D +T + +L + +
Sbjct: 297 FRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ K++H +++ + ++ + LI+ Y C A+ +F + +TA+I Y
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGY 416
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
+ Y +++++F ++ SPN T ++L +
Sbjct: 417 LHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%)
Query: 109 RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKE 168
R S+ WN++IS NG +AL + ML G P+ T ++ C L+ K
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
+ + + SSL+ Y + G I +LFD + +K+ ++W M++ + G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
L+ + M++ + + VT +L VC + LG ++HG V+ G +
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
L++MY CG FD+A +F + ++TW +I Y E++ F M+S+G P+
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 349 TFTFEAVL 356
TF ++L
Sbjct: 340 AITFSSLL 347
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 2/262 (0%)
Query: 150 MMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
+ ++L C+ L+QGK+VHA+ + ++ MY+ CG ++F ++
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 210 --KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
+ ++ W ++I S V NG LN+ALA M D T ++ C L+ K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
+ V LG +VA+ LI Y G D +F V K + W ++ Y
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHC 387
I F +M + SPN TF+ VLS+C ++ + L+ ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 388 TFMVQLLTRYGKLDEAQRFLEM 409
++ + ++ G+ D+A + M
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRM 299
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 165/330 (50%), Gaps = 3/330 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRS--VSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
++LI ++ K G V AR+VFEE+P+ S +NA+ISG N +A R M E G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ +TM+ ++P+C L G+ +H +K V +++S + MY KCG +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
RLFD M K +I W A+I +NG + L + M+ + D TL +L C L
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
K+G EV V GF +V+ I+MY CG A+ VF +P K ++WTA+I
Sbjct: 272 AKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 331
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIE 381
YG + LFD M+ G P+ F VLS C +G + F M Y++E
Sbjct: 332 CYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH + +V LL R G+LDEA F+E P
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 2/301 (0%)
Query: 113 SAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAY 172
+ WN + LA+ E++ R ML G P+ + IL CA L G+++H +
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 173 ALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN--VILWTAMIDSCVENGFLN 230
K ++++L+ MY KCG++ + ++F+ + + + + A+I N +
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 231 EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELI 290
+A + R M+ T D+VT+ ++ +C + LG+ +HGQ +K G S V I
Sbjct: 139 DAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 291 NMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTF 350
MY CG + + +F +P KG +TW A+I Y + ++L++ M S+G P+ F
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPF 258
Query: 351 TFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMS 410
T +VLS C G + L+ + + + + R G L +A+ ++
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 411 P 411
P
Sbjct: 319 P 319
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 175/340 (51%), Gaps = 13/340 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
S+L+ ++ V R+VF+ R + WNAMI+G + N +EAL ++ + G
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
N TM ++P C + + + +H + +KR + ++LM MYS+ G I ++R
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQ----------RADTVTLT 252
+F ME ++++ W MI V + +AL ++ MQ L R+ + +++TL
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 253 RMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+L C L + GKE+H +K A+ V + L++MY CG ++ VF +P K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
+TW +I AYG +EAIDL +MM G PN TF +V + C +G V++ R F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 373 DLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+M Y +E S +H +V LL R G++ EA + + M P
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 143/288 (49%), Gaps = 13/288 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G + ++ + R + WN ++S L N EALEY+R M+ EG
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCGVIGYSIR 203
P+ T+ +LP C+ L L+ GKE+HAYALK L + V S +V MY C + R
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRR 359
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELR 262
+FDGM + + LW AMI +N EAL + M+ + A++ T+ ++ C
Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+ +HG V+K G +V L++MY G D A +FG + D+ +TW +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 323 AYGYKEWYREAIDLFDLM------MSNGCS-----PNTFTFEAVLSIC 359
Y + E + +A+ L M +S G S PN+ T +L C
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 14/332 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K G+ +VF+ R+ +WN++IS L ALE R ML+E
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 145 PNWITMMVILPICAKL---RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
P+ T++ ++ C+ L L GK+VHAY L++ L + ++++L+ MY K G + S
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASS 255
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
L ++++ W ++ S +N L EAL +R M L D T++ +L C L
Sbjct: 256 KVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 262 RRVKLGKEVHGQVLKLG-FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
++ GKE+H LK G +V + L++MY C + + VF + D+ W A+
Sbjct: 316 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 375
Query: 321 IRAYGYKEWYREAIDLFDLM-MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
I Y E +EA+ LF M S G N+ T V+ C R+G AF + + +
Sbjct: 376 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG----AFSRKEAIHGFV 431
Query: 380 IEASKEHCTF----MVQLLTRYGKLDEAQRFL 407
++ + F ++ + +R GK+D A R
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 7/258 (2%)
Query: 107 SPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQ 165
S RS W ++ + REA L YV M+ G +P+ +L A L+ ++
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 166 GKEVHAYALKRRF-LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCV 224
GK++HA+ K + + VT+ ++L+ +Y KCG G ++FD + ++N + W ++I S
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL---RRVKLGKEVHGQVLKLGFAS 281
AL R M + TL ++ C L + +GK+VH L+ G +
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM 341
++ L+ MYG G ++K++ G+ + +TW ++ + E EA++ M+
Sbjct: 236 -SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 342 SNGCSPNTFTFEAVLSIC 359
G P+ FT +VL C
Sbjct: 295 LEGVEPDEFTISSVLPAC 312
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W ++ S V + L EA+ M + + D +L +L+ ++LGK++H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 276 KLGFA--SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA 333
K G+ SV VA L+N+Y CG F VF + ++ ++W +LI + E + A
Sbjct: 125 KFGYGVDSV-TVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQL 393
++ F M+ P++FT +V++ C E + Y + + + + L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHAYGLRKGELNSFIINTL 242
Query: 394 LTRYGKL 400
+ YGKL
Sbjct: 243 VAMYGKL 249
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 184/329 (55%), Gaps = 6/329 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGK 143
+S++ ++ K G V A ++F +R++ AWN MI A NG +A L + ++ + G
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ IT + +LP A L +G+ +H YA++R FLPH+ + ++L+ MY +CG + +
Sbjct: 331 QPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD M +KNVI W ++I + V+NG AL + + + + D+ T+ +L E
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ G+E+H ++K + S + L++MY CG ++A+ F + K ++W ++I A
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEA 382
Y + R ++ LF M+++ +PN TF ++L+ C +G V++ + +F+ M Y I+
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH M+ L+ R G A+RFLE P
Sbjct: 567 GIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 6/274 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI L+ K G A +VFEE P R + +WN+MISG G +L + ML+ G +
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIR 203
P+ + M L C+ + + K GKE+H +A++ R MV +S++ MYSK G + Y+ R
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELR 262
+F+GM ++N++ W MI NG + +A + M + + D +T +L L
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
G+ +HG ++ GF + LI+MYG CG +A+++F + +K ++W ++I
Sbjct: 349 ----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
AY A++LF + + P++ T ++L
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 82 NDPSSLIQLHFKRGNVDL-----ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVR 136
NDP+ L RG D A Q+F+E + WN MI G G EA+++
Sbjct: 63 NDPALTRAL---RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYS 119
Query: 137 LMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG 196
M+ G + + T ++ A + +L++GK++HA +K F+ V + +SL+ +Y K G
Sbjct: 120 RMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLG 179
Query: 197 VIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ ++F+ M +++++ W +MI + G +L + + M + D + L
Sbjct: 180 CAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALG 239
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHY-VAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
C + K+GKE+H ++ + V +++MY G A+ +F + + +
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIV 299
Query: 316 TWTALIRAYGYKEWYREAIDLFDLMM-SNGCSPNTFT 351
W +I Y +A F M NG P+ T
Sbjct: 300 AWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 171/331 (51%), Gaps = 3/331 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFP---REALEYVRLMLEE 141
+SLI ++ K + AR+VF+ V +NAMI G + G EAL R M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
RP+ +T + +L A L +L K++H K + S+L+ +YS C + S
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+FD M+ K++++W +M V+ EAL + +QL+R+R D T M+ G L
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
V+LG+E H Q+LK G Y+ L++MY CG ++A F + + + W ++I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
+Y ++A+ + + MMS G PN TF VLS C AG VED + F+LM + IE
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
EH MV LL R G+L++A+ +E P+
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPT 719
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 132/273 (48%), Gaps = 3/273 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI + K GN+D AR VF+ P +S W MISG G +L+ ++E+ P+
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+ +L C+ L L+ GK++HA+ L+ ++++ L+ Y KCG + + +LF+
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
GM KN+I WT ++ +N EA+ + SM + D + +L C L +
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY-- 324
G +VH +K + YV LI+MY C +A+ VF + + A+I Y
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 325 -GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
G + EA+++F M P+ TF ++L
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 154/321 (47%), Gaps = 12/321 (3%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRP 145
LI L+ + G + AR+VFE+ P R++ +W+ M+S H+G E+L ++ P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 146 NWITMMVILPICAKLRTLKQGK----EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
N + + C+ L +G+ ++ ++ +K F V + + L+ Y K G I Y+
Sbjct: 145 NEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+FD + +K+ + WT MI CV+ G +L + + D L+ +L C L
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++ GK++H +L+ G + LI+ Y CG A +F +P+K ++WT L+
Sbjct: 263 PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y ++EA++LF M G P+ + ++L+ C A F + Y I+
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL----HALGFGTQVHAYTIK 378
Query: 382 ASKEHCTFMVQ-LLTRYGKLD 401
A+ + +++ L+ Y K D
Sbjct: 379 ANLGNDSYVTNSLIDMYAKCD 399
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 113/234 (48%), Gaps = 4/234 (1%)
Query: 183 TMVSSLMV-MYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
T +S++++ +YS+ G + Y+ ++F+ M ++N++ W+ M+ +C +G E+L V
Sbjct: 79 TYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWR 138
Query: 242 TRQRA-DTVTLTRMLCVCGEL--RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV 298
TR+ + + L+ + C L R + ++ ++K GF YV LI+ Y G
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGN 198
Query: 299 FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
D A+LVF A+P+K ++TWT +I ++ LF +M + P+ + VLS
Sbjct: 199 IDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA 258
Query: 359 CDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
C F+E + + Y +E ++ + G++ A + P+
Sbjct: 259 CSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G+ + A + F+ + R V WN++IS A++G ++AL+ + M+ EG
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN+IT + +L C+ ++ G + L+ P ++ + + G + + L
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKAREL 713
Query: 205 FDGMEKK-NVILWTAMIDSCVENGF--LNEALAVMRSMQLTRQRADTVTLTRMLCVCG-- 259
+ M K I+W +++ C + G L E A M + + L+ + G
Sbjct: 714 IEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMW 773
Query: 260 -ELRRVKLGKEVHGQVLKLG 278
E ++V+ +V G V + G
Sbjct: 774 TEAKKVRERMKVEGVVKEPG 793
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 173/326 (53%), Gaps = 1/326 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI + K G V+LARQVF+ RS+ +WN MI N EAL+ M EG + +
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS 161
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T+ +L C + K++H ++K ++ + ++L+ +Y+KCG+I ++++F+
Sbjct: 162 EFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFE 221
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M+ K+ + W++M+ V+N EAL + R Q + TL+ ++C C L +
Sbjct: 222 SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
GK++H + K GF S +VA+ ++MY CG + ++F V +K W +I +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKE 385
+E + LF+ M +G PN TF ++LS+C G VE+ RFF LM +TY + +
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 386 HCTFMVQLLTRYGKLDEAQRFLEMSP 411
H + MV +L R G L EA ++ P
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIP 427
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 7/261 (2%)
Query: 108 PRRS-VSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQG 166
PRRS S+ + IS LA + +E + R E R + IL +CA+ + +
Sbjct: 26 PRRSNTSSLSRNISVLA--SYDQEEVSPGRYSNEFSNRN---LVHEILQLCARNGAVMEA 80
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
K H ++ VT+++ L+ YSKCG + + ++FDGM +++++ W MI N
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
+EAL + M+ + T++ +L CG K++H +K YV
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
L+++Y CG+ +A VF ++ DK S+TW++++ Y + Y EA+ L+
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 347 PNTFTFEAVLSICDR-AGFVE 366
N FT +V+ C A +E
Sbjct: 261 QNQFTLSSVICACSNLAALIE 281
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K G + A QVFE +S W++M++G N EAL R
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N T+ ++ C+ L L +GK++HA K F +V + SS + MY+KCG + S +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +++KN+ LW +I ++ E + + MQ + VT + +L VCG V
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 265 KLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
+ G+ ++ L VHY ++++ G G+ A + ++P D + W +L
Sbjct: 381 EEGRRFFKLMRTTYGLSPNVVHYSC--MVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Query: 321 I---RAYGYKEWYREAID-LFDLMMSNG 344
+ R Y E A + LF+L N
Sbjct: 439 LASCRVYKNLELAEVAAEKLFELEPENA 466
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 174/329 (52%), Gaps = 3/329 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
S++ F+ G+V+ R++F P+ SVSAWNAM+SG ++ EA+ R M + +P
Sbjct: 355 SVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKP 414
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ T+ VIL CA+LR L+ GK++H ++ + +VS L+ +YS+C + S +F
Sbjct: 415 DKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIF 474
Query: 206 DG-MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA-DTVTLTRMLCVCGELRR 263
D + + ++ W +MI N +AL + R M T + + +L C L
Sbjct: 475 DDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCS 534
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ G++ HG V+K G+ S +V L +MY CG D+A+ F AV K ++ W +I
Sbjct: 535 LLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHG 594
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEA 382
YG+ EA+ L+ M+S+G P+ TF +VL+ C +G VE M + IE
Sbjct: 595 YGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEP 654
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H +V L R G+L++A++ E +P
Sbjct: 655 ELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 152/298 (51%), Gaps = 10/298 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++ + K G++ A +VF+ P R V +WN MIS L GF +AL + M+ +G
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG-VIGYSIR 203
P+ T+ +L C+K+ G H A+K ++ + ++L+ MY+KCG ++ Y +R
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV------ 257
+F+ + + N + +TA+I + EA+ + R M + D+V L+ +L +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 258 CGELRRV---KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS 314
C L + +LGK++H L+LGF ++ L+ +Y + A+L+F +P+
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
++W +I +G + ++++ M +G PN T +VL C R+G VE R F
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIF 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 41/328 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL++++ K +++ A +F E P +V +WN MI G +++E++ M + G +
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T + +L C + ++ G+ R+
Sbjct: 348 PNEVTCISVLGACFRSGDVETGR-----------------------------------RI 372
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + + +V W AM+ EA++ R MQ + D TL+ +L C LR +
Sbjct: 373 FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFL 432
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTALIRA 323
+ GK++HG V++ + ++ + LI +Y C + ++ +F ++ + W ++I
Sbjct: 433 EGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISG 492
Query: 324 YGYKEWYREAIDLFDLMMSNGC-SPNTFTFEAVLSICDRAGFVEDAFRFFDLM--STYEI 380
+ + +A+ LF M PN +F VLS C R + +F L+ S Y
Sbjct: 493 FRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS 552
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLE 408
++ E T + + + G++D A++F +
Sbjct: 553 DSFVE--TALTDMYCKCGEIDSARQFFD 578
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 166 GKEVHAYALKRRFLPHVTMVSSLMVMYSKC------------------------------ 195
GK +H + ++ + + L+ +Y +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 196 -GVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRM 254
G +G + +FDGM +++V+ W MI V GF +AL V + M TL +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 255 LCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACG-VFDNAKLVFGAVPDKG 313
L C ++ G HG +K G +V L++MY CG + D VF ++
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
+++TA+I + EA+ +F LM G ++ +LSI
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L ++ K G +D ARQ F+ R++ WN MI G HNG EA+ R M+ G++
Sbjct: 558 TALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEK 617
Query: 145 PNWITMMVILPICAKLRTLKQGKEV-----HAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
P+ IT + +L C+ ++ G E+ + ++ ++ +V L + G +
Sbjct: 618 PDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCL----GRAGRLE 673
Query: 200 YSIRLFDGME-KKNVILWTAMIDSCVENG 227
+ +L + K + +LW ++ SC +G
Sbjct: 674 DAEKLAEATPYKSSSVLWEILLSSCRVHG 702
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 179/329 (54%), Gaps = 3/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++ + + K G++ A++VF ++V++WNA+I G A + PR +L+ M G
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +L C+KL++L+ GKEVH + ++ + + S++ +Y CG + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD ME K+++ W +I ++NGF + AL V R M L + +++ + C L +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+LG+E H LK ++A LI+MY G + VF + +K + +W A+I Y
Sbjct: 614 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 673
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
G +EAI LF+ M G +P+ TF VL+ C+ +G + + R+ D M S++ ++ +
Sbjct: 674 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 733
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFL--EMS 410
+H ++ +L R G+LD+A R + EMS
Sbjct: 734 LKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 6/283 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + G V A Q+F+ P R++ +WN+MI + NGF E+ + M+EE
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 145 ----PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
P+ T++ +LP+CA+ R + GK VH +A+K R + + ++LM MYSKCG I
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLCVC 258
+ +F KNV+ W M+ G + V+R M + +AD VT+ + VC
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
+ KE+H LK F VA + Y CG A+ VF + K +W
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
ALI + R ++D M +G P++FT ++LS C +
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 142/277 (51%), Gaps = 2/277 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++L+ ++ K G + A+ +F+ + ++V +WN M+ G + G + +R ML G+
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 144 -RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ + +T++ +P+C L KE+H Y+LK+ F+ + + ++ + Y+KCG + Y+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
R+F G+ K V W A+I ++ +L M+++ D+ T+ +L C +L+
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++LGKEVHG +++ +V ++++Y CG + +F A+ DK ++W +I
Sbjct: 511 SLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVIT 570
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
Y + A+ +F M+ G + V C
Sbjct: 571 GYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGAC 607
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 5/265 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
+ +I ++ G+ D +R VF+ +++ WNA+IS + N E LE ++ ++
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ T ++ CA + + G VH +K + V + ++L+ Y G + +++
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA----DTVTLTRMLCVCG 259
LFD M ++N++ W +MI +NGF E+ ++ M D TL +L VC
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
R + LGK VHG +KL + L++MY CG NA+++F +K ++W
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNG 344
++ + + D+ M++ G
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGG 388
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 152 VILPICAKLRTLKQGKEVHAY-ALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
++L K + ++ G+++H + R + + ++ MY+ CG S +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKE 269
KN+ W A+I S N +E L M T D T ++ C + V +G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 270 VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEW 329
VHG V+K G +V L++ YG G +A +F +P++ ++W ++IR + +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 330 YREAIDLFDLMM-SNGCS---PNTFTFEAVLSICDR 361
E+ L MM NG P+ T VL +C R
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVL-KLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
L +L G+ + +++G+++H V + + +I MY CG D+++ VF A
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLF-DLMMSNGCSPNTFTFEAVLSICD------- 360
+ K W A+I +Y E Y E ++ F +++ + P+ FT+ V+ C
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 361 ---------RAGFVEDAFRFFDLMSTY 378
+ G VED F L+S Y
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFY 232
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 4/325 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ I L+ K G + + +F E + + A+NAMI G NG +L + ++ G R
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
T++ ++P+ L + +H Y LK FL H ++ ++L +YSK I + +L
Sbjct: 320 LRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKL 376
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD +K++ W AMI +NG +A+++ R MQ + + VT+T +L C +L +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGAL 436
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LGK VH V F S YV+ LI MY CG A+ +F + K +TW +I Y
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGY 496
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTYEIEAS 383
G +EA+++F M+++G +P TF VL C AG V++ F+ ++ Y E S
Sbjct: 497 GLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLE 408
+H MV +L R G L A +F+E
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIE 581
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 163/326 (50%), Gaps = 4/326 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-K 143
S++++++FK V+ AR+VF+ P + WN MISG N E+++ R ++ E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
R + T++ ILP A+L+ L+ G ++H+ A K H +++ + +YSKCG I
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF K +++ + AMI NG +L++ + + L+ R + TL ++ V G L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ +HG LK F S V+ L +Y ++A+ +F P+K +W A+I
Sbjct: 338 IY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
Y +AI LF M + SPN T +LS C + G + DL+ + + E+S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEM 409
T ++ + + G + EA+R ++
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDL 480
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 14/338 (4%)
Query: 82 NDPSSLIQLHFKR---GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRL 137
ND S L +L + G + AR +F R V +N ++ G + N P +L + L
Sbjct: 50 NDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHL 109
Query: 138 MLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV 197
+PN T + + R + G+ +H A+ + + S+++ MY K
Sbjct: 110 RKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR 169
Query: 198 IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLC 256
+ + ++FD M +K+ ILW MI +N E++ V R + + R DT TL +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT 316
EL+ ++LG ++H K G S YV I++Y CG +F +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVA 289
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS 376
+ A+I Y ++ LF +M +G + T +++ + + A + L S
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY-AIHGYCLKS 348
Query: 377 TYEIEASKEHCTFMVQLLTRYGKLDE---AQRFLEMSP 411
+ H + L T Y KL+E A++ + SP
Sbjct: 349 NF-----LSHASVSTALTTVYSKLNEIESARKLFDESP 381
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
+ HA + F +++++ L S G I Y+ +F +++ +V L+ ++ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 228 FLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
+ +L+V + + T + ++ T + R + G+ +HGQ + G S +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
+ ++ MY ++A+ VF +P+K ++ W +I Y E Y E+I +F +++ C+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 32/349 (9%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G+++ AR+VF+ESP R + +WN +I+G G +A+ +LM EG +P+ +TM+ ++
Sbjct: 205 GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLV 264
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI---------------- 198
C+ L L +GKE + Y + + +V++LM M+SKCG I
Sbjct: 265 SSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 199 -------GY--------SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTR 243
GY S +LFD ME+K+V+LW AMI V+ +ALA+ + MQ +
Sbjct: 325 SWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384
Query: 244 QRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAK 303
+ D +T+ L C +L + +G +H + K + + L++MY CG A
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEAL 444
Query: 304 LVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
VF + + S+T+TA+I AI F+ M+ G +P+ TF +LS C G
Sbjct: 445 SVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 504
Query: 364 FVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
++ +F M S + + +H + MV LL R G L+EA R +E P
Sbjct: 505 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMP 553
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 127/256 (49%), Gaps = 9/256 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I + + G +D++R++F++ + V WNAMI G ++AL + M +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ ITM+ L C++L L G +H Y K +V + +SL+ MY+KCG I ++ +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F G++ +N + +TA+I +G + A++ M D +T +L C +
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 265 KLGKEVHGQV---LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
+ G++ Q+ L HY + ++++ G G+ + A + ++P + + W AL
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHY--SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Query: 321 I---RAYGYKEWYREA 333
+ R +G E +A
Sbjct: 565 LFGCRMHGNVELGEKA 580
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 145/343 (42%), Gaps = 38/343 (11%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG---KRPNWITMMVI 153
+D + ++ + ++ +WN I G + + P+E+ + ML G RP+ T V+
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 154 LPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
+CA LR G + + LK R + HV S + M++ CG + + ++FD +
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNAS--IHMFASCGDMENARKVFDESPVR 220
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+++ W +I+ + G +A+ V + M+ + D VT+ ++ C L + GKE +
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY---GYKE 328
V + G + L++M+ CG A+ +F + + ++WT +I Y G +
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLD 340
Query: 329 WYR----------------------------EAIDLFDLMMSNGCSPNTFTFEAVLSICD 360
R +A+ LF M ++ P+ T LS C
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 361 RAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
+ G ++ + Y + + T +V + + G + EA
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 198 IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM---QLTRQRADTVTLTRM 254
+ YS+++ G+E N+ W I E+ E+ + + M R D T +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 255 LCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS 314
VC +LR LG + G VLKL V +V I+M+ +CG +NA+ VF P +
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDL 374
++W LI Y +AI ++ LM S G P+ T ++S C G + F++
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 375 MSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ + + ++ + ++ G + EA+R +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 175/326 (53%), Gaps = 1/326 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K G++ AR VF + +WN++ISG +G EA++ ++M+ ++ +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
IT ++++ + +L LK GK +H+ +K +++ ++L+ MY+KCG +G S+++F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M + + W +I +CV G L V M+ + D T L +C L +L
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
GKE+H +L+ G+ S + LI MY CG +N+ VF + + +TWT +I AYG
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKE 385
+A++ F M +G P++ F A++ C +G V++ F+ M T Y+I+ E
Sbjct: 588 YGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIE 647
Query: 386 HCTFMVQLLTRYGKLDEAQRFLEMSP 411
H +V LL+R K+ +A+ F++ P
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMP 673
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 1/277 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ + G + ARQVF+E P R + +WN++ISG + +G+ EALE +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +LP L +KQG+ +H +ALK V + + L+ MY K + R+
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M+ ++ + + MI ++ + E++ + L + + D +T++ +L CG LR +
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDL 323
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
L K ++ +LK GF V LI++Y CG A+ VF ++ K +++W ++I Y
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
EA+ LF +MM + T+ ++S+ R
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 137/275 (49%), Gaps = 5/275 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE--EGKR 144
L+ ++ K AR+VF+E R ++N MI G E+ VR+ LE + +
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES---VRMFLENLDQFK 304
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T+ +L C LR L K ++ Y LK F+ T+ + L+ +Y+KCG + + +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ ME K+ + W ++I +++G L EA+ + + M + ++AD +T ++ V L +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
K GK +H +K G V+ LI+MY CG ++ +F ++ ++TW +I A
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ + + M + P+ TF L +C
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 91 HFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWIT 149
HF+ L+ VF SP ++V WN++I + NG EALE+ + E P+ T
Sbjct: 51 HFREPASSLS--VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT 108
Query: 150 MMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
++ CA L + G V+ L F + + ++L+ MYS+ G++ + ++FD M
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 210 KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKE 269
++++ W ++I +G+ EAL + ++ + D+ T++ +L G L VK G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 270 VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEW 329
+HG LK G SV V L+ MY +A+ VF + + S+++ +I Y E
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 330 YREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
E++ +F L + P+ T +VL C
Sbjct: 289 VEESVRMF-LENLDQFKPDLLTVSSVLRAC 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 26/253 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G V + ++F WN +IS G L+ M +
Sbjct: 447 NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV 506
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +V LP+CA L + GKE+H L+ + + + ++L+ MYSKCG + S R+
Sbjct: 507 PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRV 566
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M +++V+ WT MI + G +AL M+ + D+V ++ C
Sbjct: 567 FERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS----- 621
Query: 265 KLGKEVHGQVLKLGFA-----SVHYVAAELINMYGACGV--------FDNAKLVFGAVPD 311
H ++ G A HY +I Y AC V A+ A+P
Sbjct: 622 ------HSGLVDEGLACFEKMKTHYKIDPMIEHY-ACVVDLLSRSQKISKAEEFIQAMPI 674
Query: 312 KGSMT-WTALIRA 323
K + W +++RA
Sbjct: 675 KPDASIWASVLRA 687
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 2/319 (0%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRPNWITMMVI 153
G ++ AR++F+E + +W AM++G P EAL LM RPN T+ +
Sbjct: 165 GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIA 224
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
+ A ++ +++GKE+H + ++ + SSLM MY KCG I + +FD + +K+V
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ WT+MID ++ E ++ + + +R + T +L C +L +LGK+VHG
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA 333
+ ++GF + ++ L++MY CG ++AK V P ++WT+LI EA
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHCTFMVQ 392
+ FDL++ +G P+ TF VLS C AG VE FF + + + + +H T +V
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 393 LLTRYGKLDEAQRFLEMSP 411
LL R G+ ++ + + P
Sbjct: 465 LLARSGRFEQLKSVISEMP 483
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 36/315 (11%)
Query: 129 REALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSL 188
REA++ +L K+P T ++ +C++ R L++GK+VH + F+P + + + L
Sbjct: 71 REAVQ----LLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRL 126
Query: 189 MVMYSKCG-----------------------VIGY--------SIRLFDGMEKKNVILWT 217
+ MY+KCG V GY + +LFD M +K+ WT
Sbjct: 127 LRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 218 AMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
AM+ V+ EAL + MQ + R + T++ + ++ ++ GKE+HG +++
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
G S + + L++MYG CG D A+ +F + +K ++WT++I Y +RE L
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTR 396
F ++ + PN +TF VL+ C E + M+ + + +V + T+
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 397 YGKLDEAQRFLEMSP 411
G ++ A+ ++ P
Sbjct: 367 CGNIESAKHVVDGCP 381
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K G +D AR +F++ + V +W +MI + RE ++ +R
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER 316
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T +L CA L T + GK+VH Y + F P+ SSL+ MY+KCG I + +
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
DG K +++ WT++I C +NG +EAL + + + D VT +L C V
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 265 KLGKEVHGQVL---KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWTAL 320
+ G E + +L S HY L+++ G F+ K V +P K S W ++
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTC--LVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 321 I---RAYGYKEWYREAI-DLFDLMMSN 343
+ YG + EA +LF + N
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPEN 521
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 223 CVENGFLNEALAVMRSMQLTRQ---------RADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
C N F EA+ V+ +L R+ + T ++ VC + R ++ GK+VH
Sbjct: 52 CRANRF-GEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEH 110
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA 333
+ GF + L+ MY CG +A+ VF +P++ +W ++ Y EA
Sbjct: 111 IRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEA 170
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
LFD M +++++ A+++ + E+A + LM
Sbjct: 171 RKLFDEMTEK----DSYSWTAMVTGYVKKDQPEEALVLYSLM 208
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 166/320 (51%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K G A+ V + + V A+I G + G EA++ + ML E +
Sbjct: 205 SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQ 264
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T +L C L+ + GK +H +K F + +SL+ MY +C ++ S+R+
Sbjct: 265 PNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRV 324
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +E N + WT++I V+NG AL R M + ++ TL+ L C L
Sbjct: 325 FKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMF 384
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G+++HG V K GF Y + LI++YG CG D A+LVF + + ++ +I +Y
Sbjct: 385 EEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSY 444
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+ REA+DLF+ M++ G PN T +VL C+ + VE+ FD +I +
Sbjct: 445 AQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN 504
Query: 385 EHCTFMVQLLTRYGKLDEAQ 404
+H MV LL R G+L+EA+
Sbjct: 505 DHYACMVDLLGRAGRLEEAE 524
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 159/323 (49%), Gaps = 5/323 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S L+ K G++D ARQVF+ R + WN++I+ L + +EA+E RLM+
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF-LPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ T+ + + L K+ + H A+ + +V + S+L+ MY K G +
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+ D +E+K+V+L TA+I + G EA+ +SM + + + + T +L CG L+
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ GK +HG ++K GF S L+ MY C + D++ VF + ++WT+LI
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS- 341
Query: 324 YGYKEWYREAIDL--FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
G + RE + L F MM + PN+FT + L C E+ + +++ Y +
Sbjct: 342 -GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQ 404
K + ++ L + G D A+
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMAR 423
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C R++ K + A+ LK F P S L+ KCG I Y+ ++FDGM +++
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
++ W ++I +++ EA+ + R M D TL+ + +L K + HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 273 QVLKLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+ LG S +V + L++MY G AKLV V +K + TALI Y K
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMV 391
EA+ F M+ PN +T+ +VL C + + LM E++ T ++
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 392 QLLTRYGKLDEAQRFLE 408
+ R +D++ R +
Sbjct: 310 TMYLRCSLVDDSLRVFK 326
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 171/329 (51%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G + +R+V + PRR V AWNA+I G A + P +AL + M EG
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443
Query: 145 PNWITMMVILPICA-KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
N+IT++ +L C L++GK +HAY + F + +SL+ MY+KCG + S
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+G++ +N+I W AM+ + +G E L ++ M+ D + + L +L
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G+++HG +KLGF ++ +MY CG + ++ +W LI A
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEA 382
G ++ E F M+ G P TF ++L+ C G V+ ++D+++ + +E
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EHC ++ LL R G+L EA+ F+ P
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMP 712
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 164/327 (50%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ L+ G V +R+VFEE P R+V +W +++ G + G P E ++ + M EG
Sbjct: 81 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 140
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +M +++ C L+ G+++ +K + + +SL+ M G + Y+ +
Sbjct: 141 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 200
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +++ I W ++ + +NG + E+ + M+ ++ T++ +L V G +
Sbjct: 201 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 260
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
K G+ +HG V+K+GF SV V L+ MY G A LVF +P K ++W +L+ ++
Sbjct: 261 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+A+ L M+S+G S N TF + L+ C F E L+ + ++
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+V + + G++ E++R L P
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 108 PRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTL-KQG 166
P R+ +WN M+SG+ G E +E+ R M + G +P+ + ++ C + ++ ++G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
+VH + K L V + ++++ +Y G++ S ++F+ M +NV+ WT+++ +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
G E + + + M+ + +++ ++ CG L+ LG+++ GQV+K G S V
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
LI+M G+ G D A +F + ++ +++W ++ AY E+ +F LM
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 347 PNTFTFEAVLSI 358
N+ T +LS+
Sbjct: 242 VNSTTVSTLLSV 253
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 7/324 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI + GNVD A +F++ R +WN++ + A NG E+ LM
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N T+ +L + + K G+ +H +K F V + ++L+ MY+ G + +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M K++I W +++ S V +G +AL ++ SM + + + VT T L C
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G+ +HG V+ G + L++MYG G ++ V +P + + W ALI Y
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA-- 382
E +A+ F M G S N T +VLS C G D + Y + A
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG---DLLERGKPLHAYIVSAGF 478
Query: 383 -SKEHC-TFMVQLLTRYGKLDEAQ 404
S EH ++ + + G L +Q
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQ 502
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 208 MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV-KL 266
M +N + W M+ V G E + R M + + + ++ CG + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
G +VHG V K G S YV+ ++++YG G+ ++ VF +PD+ ++WT+L+ Y
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
K E ID++ M G N + V+S C G ++D
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD 158
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 171/329 (51%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G + +R+V + PRR V AWNA+I G A + P +AL + M EG
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 145 PNWITMMVILPICA-KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
N+IT++ +L C L++GK +HAY + F + +SL+ MY+KCG + S
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+G++ +N+I W AM+ + +G E L ++ M+ D + + L +L
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G+++HG +KLGF ++ +MY CG + ++ +W LI A
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEA 382
G ++ E F M+ G P TF ++L+ C G V+ ++D+++ + +E
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EHC ++ LL R G+L EA+ F+ P
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMP 729
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 164/327 (50%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ L+ G V +R+VFEE P R+V +W +++ G + G P E ++ + M EG
Sbjct: 98 TAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVG 157
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +M +++ C L+ G+++ +K + + +SL+ M G + Y+ +
Sbjct: 158 CNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYI 217
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +++ I W ++ + +NG + E+ + M+ ++ T++ +L V G +
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ 277
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
K G+ +HG V+K+GF SV V L+ MY G A LVF +P K ++W +L+ ++
Sbjct: 278 KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+A+ L M+S+G S N TF + L+ C F E L+ + ++
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+V + + G++ E++R L P
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMP 424
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 141/270 (52%), Gaps = 1/270 (0%)
Query: 90 LHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWIT 149
++ K G V AR +F+ P R+ +WN M+SG+ G E +E+ R M + G +P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 150 MMVILPICAKLRTL-KQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
+ ++ C + ++ ++G +VH + K L V + ++++ +Y G++ S ++F+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
+NV+ WT+++ + G E + + + M+ + +++ ++ CG L+ LG+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
++ GQV+K G S V LI+M G+ G D A +F + ++ +++W ++ AY
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
E+ +F LM N+ T +LS+
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 7/324 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI + GNVD A +F++ R +WN++ + A NG E+ LM
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N T+ +L + + K G+ +H +K F V + ++L+ MY+ G + +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M K++I W +++ S V +G +AL ++ SM + + + VT T L C
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G+ +HG V+ G + L++MYG G ++ V +P + + W ALI Y
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA-- 382
E +A+ F M G S N T +VLS C G D + Y + A
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG---DLLERGKPLHAYIVSAGF 495
Query: 383 -SKEHC-TFMVQLLTRYGKLDEAQ 404
S EH ++ + + G L +Q
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQ 519
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 191 MYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT 250
MY+K G + + LFD M +N + W M+ V G E + R M + +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 251 LTRMLCVCGELRRV-KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
+ ++ CG + + G +VHG V K G S YV+ ++++YG G+ ++ VF +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
PD+ ++WT+L+ Y K E ID++ M G N + V+S C G ++D
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD 175
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 1/320 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K + A VF++ ++ +W AMISG N ++ R M E R
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 145 PNWITMMVILPICAKLRTLKQ-GKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T++ +LP C +L KE+H ++ + + ++ M MY +CG + S
Sbjct: 249 PNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRV 308
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+ + ++V++W++MI E G +E + ++ M+ A++VTL ++ C
Sbjct: 309 LFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTL 368
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ VH Q+LK GF S + LI+MY CG A+ VF + +K ++W+++I A
Sbjct: 369 LSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINA 428
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
YG EA+++F M+ G + F A+LS C+ AG VE+A F Y + +
Sbjct: 429 YGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVT 488
Query: 384 KEHCTFMVQLLTRYGKLDEA 403
EH + LL R+GK+D+A
Sbjct: 489 LEHYACYINLLGRFGKIDDA 508
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 145/320 (45%), Gaps = 12/320 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K R+VF+E R ++ ++I+ +G EA++ ++ M G
Sbjct: 86 NSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFI 145
Query: 145 PNWITMMVILPICAKL-RTLKQGKEVHAYAL-KRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P + +L +C ++ + K + HA L R V + ++L+ MY K +
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF 205
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FD ME KN + WTAMI CV N + + R+MQ R + VTL +L C EL
Sbjct: 206 HVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN 265
Query: 263 R-VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
L KE+HG + G + + A + MY CG ++++F + + W+++I
Sbjct: 266 YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMI 325
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y E ++L + M G N+ T A++S C + + A ST +
Sbjct: 326 SGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFA-------STVHSQ 378
Query: 382 ASKEHCTFMVQLLTRYGKLD 401
K C FM +L +D
Sbjct: 379 ILK--CGFMSHILLGNALID 396
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 172/327 (52%), Gaps = 4/327 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ + G+V + VF R V +WN MIS NG E L V M ++G +
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
++IT+ +L + LR + GK+ HA+ L R+ + M S L+ MYSK G+I S +L
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAF-LIRQGIQFEGMNSYLIDMYSKSGLIRISQKL 475
Query: 205 FDG--MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
F+G +++ W +MI +NG + V R M R + VT+ +L C ++
Sbjct: 476 FEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
V LGK++HG ++ +VA+ L++MY G A+ +F ++ S+T+T +I
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIE 381
YG AI LF M +G P+ TF AVLS C +G +++ + F+ M Y I+
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLE 408
S EH + +L R G+++EA F++
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVK 682
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 147/286 (51%), Gaps = 6/286 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
SS I ++ + G+++ +R+VF+ R++ WN MI N E++E ++ + +
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ +T ++ + L+ ++ G++ H + K R LP + +V+SLMVMYS+CG + S
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP-IVIVNSLMVMYSRCGSVHKSF 373
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+F M +++V+ W MI + V+NG +E L ++ MQ + D +T+T +L LR
Sbjct: 374 GVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 433
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF--GAVPDKGSMTWTAL 320
++GK+ H +++ G + + LI+MY G+ ++ +F ++ TW ++
Sbjct: 434 NKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
I Y + +F M+ PN T ++L C + G V+
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 14/257 (5%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN--WITM 150
+ GN LARQ+F+ P+ + WN +I G N P EAL + M + N T
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV--SSLMVMYSKC----GVIGYSI-- 202
L CA+ + LK GK VH + + R L + + V +SLM MY C Y +
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLI--RCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
++FD M +KNV+ W +I V+ G EA M + V+ + R
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 263 RVKLGKEVHGQVLKLGFASVH--YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
+K +G +LKLG V +V + I+MY G ++++ VF + ++ W +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 321 IRAYGYKEWYREAIDLF 337
I Y + E+I+LF
Sbjct: 289 IGVYVQNDCLVESIELF 305
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 3/263 (1%)
Query: 98 DLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPIC 157
D+ R+VF+ R++V AWN +IS G EA +M+ +P+ ++ + + P
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 158 AKLRTLKQGKEVHAYALK--RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
+ R++K+ + LK ++ + +VSS + MY++ G I S R+FD ++N+ +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 216 WTAMIDSCVENGFLNEALAV-MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
W MI V+N L E++ + + ++ +D VT L++V+LG++ HG V
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
K + L+ MY CG + VF ++ ++ ++W +I A+ E +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 335 DLFDLMMSNGCSPNTFTFEAVLS 357
L M G + T A+LS
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLS 427
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 8/181 (4%)
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTR--QRADTVTLTRMLCVCGE 260
+LFD + K +LW +I + N +EAL M+ T D T + L C E
Sbjct: 60 QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE 119
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC------GVFDNAKLVFGAVPDKGS 314
+ +K GK VH +++ S V L+NMY +C +D + VF + K
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDL 374
+ W LI Y EA F +MM P+ +F V + ++ A F+ L
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 375 M 375
M
Sbjct: 240 M 240
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 173/331 (52%), Gaps = 6/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G++ AR+VF E + W AMI G HNG EAL + M +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T+ +L C + L+ G+ VH ++K + ++L+ MY+KC + +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYV 399
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ +K+++ W ++I +NG ++EAL + M + VT+ + C L +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 265 KLGKEVHGQVLKLGF---ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+G +H +KLGF +SVH V L++ Y CG +A+L+F + +K ++TW+A+I
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVH-VGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
YG + +++LF+ M+ PN TF ++LS C G V + ++F M Y
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
S +H T MV +L R G+L++A +E P
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMP 609
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 139/279 (49%), Gaps = 1/279 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ ++ K G + A +VF + R+V W +MI+G N E L M E
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVL 239
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N T ++ C KL L QGK H +K +V+SL+ MY KCG I + R+
Sbjct: 240 GNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRV 299
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ ++++WTAMI NG +NEAL++ + M+ + + VT+ +L CG + +
Sbjct: 300 FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENL 359
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+LG+ VHG +K+G + VA L++MY C +AK VF +K + W ++I +
Sbjct: 360 ELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
EA+ LF M S +PN T ++ S C G
Sbjct: 419 SQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 132/283 (46%), Gaps = 4/283 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ L+ G AR VF++ P W M+ N E ++ L+++ G R
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ I L C +L+ L GK++H +K +V + + L+ MY+KCG I + ++
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKV 198
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + +NV+ WT+MI V+N E L + M+ + T ++ C +L +
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK HG ++K G + L++MY CG NA+ VF + WTA+I Y
Sbjct: 259 HQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 318
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
+ EA+ LF M PN T +VLS C G +E+
Sbjct: 319 THNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIEN 358
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 117/258 (45%), Gaps = 12/258 (4%)
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
++L C + +L+Q H + +++ + L+ +Y G + +FD + +
Sbjct: 49 LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ---RADTVTLTRMLCVCGELRRVKLGK 268
+ LW M+ N E++ V++ L + R D + ++ L C EL+ + GK
Sbjct: 106 DFYLWKVMLRCYCLN---KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGK 162
Query: 269 EVHGQVLKL-GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
++H Q++K+ F +V V L++MY CG +A VF + + + WT++I Y
Sbjct: 163 KIHCQLVKVPSFDNV--VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHC 387
+ E + LF+ M N N +T+ ++ C + + F + IE S
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 388 TFMVQLLTRYGKLDEAQR 405
T ++ + + G + A+R
Sbjct: 281 TSLLDMYVKCGDISNARR 298
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 5/335 (1%)
Query: 82 NDP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
+DP +SLI + G D A ++F+ + + V W AMI G NG EA+ Y M
Sbjct: 136 SDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEM 195
Query: 139 LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGV 197
+ G N +T++ +L K+ ++ G+ VH L+ R V + SSL+ MY KC
Sbjct: 196 KKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 198 IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
+ ++FD M +NV+ WTA+I V++ ++ + V M + + TL+ +L
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
C + + G+ VH ++K LI++Y CG + A LVF + +K TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR-FFDLMS 376
TA+I + + R+A DLF M+S+ SPN TF AVLS C G VE+ R F +
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKG 435
Query: 377 TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ +E +H MV L R G L+EA+ +E P
Sbjct: 436 RFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM--RSMQLTRQRADTVTLTRMLCV 257
Y+ RL ++ ++ LW ++I LN L+ + R M+ T +L
Sbjct: 54 YARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKA 113
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
+LR + H ++K G S +V LI+ Y + G+FD A +F DK +TW
Sbjct: 114 VFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST 377
TA+I + EA+ F M G + N T V+S+ AG VED RF +
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT---VVSVLKAAGKVEDV-RFGRSVHG 228
Query: 378 YEIEASKEHCTFMV--QLLTRYGK---LDEAQRFLEMSPS 412
+E + C + L+ YGK D+AQ+ + PS
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPS 268
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 15/323 (4%)
Query: 98 DLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRPNWITMMVILPI 156
D AR++F+E P R++ WNA IS +G PREA+E ++ +G PN IT L
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDG-HPNSITFCAFLNA 218
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
C+ L G ++H L+ F V++ + L+ Y KC I S +F M KN + W
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT-----LTRMLCVCGELRRVKLGKEVH 271
+++ + V+N +A S+ R R D V ++ +L C + ++LG+ +H
Sbjct: 279 CSLVAAYVQNHEDEKA-----SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+K +V + L++MYG CG ++++ F +P+K +T +LI Y ++
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 332 EAIDLFDLMMSNGC--SPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCT 388
A+ LF+ M GC +PN TF ++LS C RAG VE+ + FD M STY IE EH +
Sbjct: 394 MALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 389 FMVQLLTRYGKLDEAQRFLEMSP 411
+V +L R G ++ A F++ P
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMP 476
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 9/328 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K + + AR V +P R+V +W ++ISGLA NG AL M EG PN
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T A LR GK++HA A+K + V + S MY K + + +LFD
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFD 167
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
+ ++N+ W A I + V +G EA+ + +++T L C + + L
Sbjct: 168 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
G ++HG VL+ GF + V LI+ YG C +++++F + K +++W +L+ AY
Sbjct: 228 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQ 287
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
+A L+ + + F +VLS C AG + + ++A E
Sbjct: 288 NHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA--GLELGRSIHAHAVKACVER 343
Query: 387 CTFM-VQLLTRYGKL----DEAQRFLEM 409
F+ L+ YGK D Q F EM
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE--G 142
S+L+ ++ K G ++ + Q F+E P +++ N++I G AH G AL M G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEV-----HAYALKRRFLPHVTMVSSLMVMYSKCGV 197
PN++T + +L C++ ++ G ++ Y ++ P S ++ M + G+
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE----PGAEHYSCIVDMLGRAGM 464
Query: 198 IGYSIRLFDGMEKKNVI-LWTAMIDSCVENG 227
+ + M + I +W A+ ++C +G
Sbjct: 465 VERAYEFIKKMPIQPTISVWGALQNACRMHG 495
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 159/328 (48%), Gaps = 1/328 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S LI ++ K G +D A + + V +W MI+G F +AL R ML+ G R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + + + CA L+ LK+G+++HA A F + ++L+ +YS+CG I S
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ E + I W A++ ++G EAL V M + T + E +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
K GK+VH + K G+ S V LI+MY CG +A+ F V K ++W A+I AY
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
+ EA+D FD M+ + PN T VLS C G V+ +F+ M S Y +
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH +V +LTR G L A+ F++ P
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 153/321 (47%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI L+ + G VDLAR+VF+ + S+W AMISGL+ N EA+ M G P
Sbjct: 228 LIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT 287
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+L C K+ +L+ G+++H LK F + ++L+ +Y G + + +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M +++ + + +I+ + G+ +A+ + + M L D+ TL ++ C +
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
G+++H KLGFAS + + L+N+Y C + A F + + W ++ AYG
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
+ R + +F M PN +T+ ++L C R G +E + + + +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 387 CTFMVQLLTRYGKLDEAQRFL 407
C+ ++ + + GKLD A L
Sbjct: 528 CSVLIDMYAKLGKLDTAWDIL 548
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+F GN+ A +F +R +N +I+GL+ G+ +A+E + M +G
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ ++ C+ TL +G+++HAY K F + + +L+ +Y+KC I ++
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNE---ALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
F E +NV+LW M+ V G L++ + + R MQ+ + T +L C L
Sbjct: 447 FLETEVENVVLWNVML---VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++LG+++H Q++K F YV + LI+MY G D A + K ++WT +I
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y + +A+ F M+ G + +S C +++ +
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+ +V L +R GK++E+ E + +
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 1/326 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+L+ L+ K +++ A F E+ +V WN M+ R + R M E P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N T IL C +L L+ G+++H+ +K F + + S L+ MY+K G + + +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
K+V+ WT MI + F ++AL R M R+D V LT + C L+ +K
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
G+++H Q GF+S L+ +Y CG + + L F ++ W AL+ +
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
EA+ +F M G N FTF + + ++ + +++ ++ E
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 386 HCTFMVQLLTRYGKLDEAQR-FLEMS 410
C ++ + + G + +A++ FLE+S
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVS 754
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L + +G++ A +VF+E P R++ WN MI LA E M+ E PN
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 147 WITMMVILPIC-AKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
T +L C +++HA L + + + L+ +YS+ G + + R+F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
DG+ K+ W AMI +N EA+ + M + + +L C ++ ++
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
+G+++HG VLKLGF+S YV L+++Y G +A+ +F + + ++T+ LI
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
+ +A++LF M +G P++ T +++ C G
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 112/272 (41%), Gaps = 3/272 (1%)
Query: 142 GKRPNWITMMVILPICAKLR-TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G RPN T+ +L C K +L +G+++H+ LK + + L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC-G 259
+ ++FD M ++ + W MI + E + M + T + +L C G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ +++H ++L G V LI++Y G D A+ VF + K +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
+I E EAI LF M G P + F +VLS C + +E + L+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQR-FLEMS 410
+ C +V L G L A+ F MS
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 184/366 (50%), Gaps = 39/366 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K GNV+ A++VF+E R+V +WN++I+ NG EAL+ ++MLE
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCGVI----- 198
P+ +T+ ++ CA L +K G+EVH +K L + ++S+ V MY+KC I
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 199 ------------------GYSIR--------LFDGMEKKNVILWTAMIDSCVENGFLNEA 232
GY++ +F M ++NV+ W A+I +NG EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 233 LAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA------SVHYVA 286
L++ ++ + +L C +L + LG + H VLK GF +V
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
LI+MY CG + LVF + ++ ++W A+I + + EA++LF M+ +G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
P+ T VLS C AGFVE+ +F M+ + + ++H T MV LL R G L+EA+
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 406 FLEMSP 411
+E P
Sbjct: 551 MIEEMP 556
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 32/299 (10%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K G +D A +F P R WN+M+SG A + EAL Y +M +EG N +
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C+ L + +G +VH+ K FL V + S+L+ MYSKCG + + R+FD M +N
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V+ W ++I +NG EAL V + M +R D VTL ++ C L +K+G+EVHG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 273 QVLKLG-FASVHYVAAELINMYGACGVFDNAKLVFGAVP--------------------- 310
+V+K + ++ ++MY C A+ +F ++P
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 311 ----------DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
++ ++W ALI Y EA+ LF L+ P ++F +L C
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 31/222 (13%)
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
VHA +K F + + + L+ YSKCG + ++FD M ++N+ W +++ + GF
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 229 LNEALAVMRSMQLTRQRA-------------------------------DTVTLTRMLCV 257
L+EA ++ RSM Q + + +L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
C L + G +VH + K F S Y+ + L++MY CG ++A+ VF + D+ ++W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+LI + EA+D+F +M+ + P+ T +V+S C
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 174/328 (53%), Gaps = 3/328 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYV-RLMLEE-GKR 144
L+ + + G+ A ++F+E P R + +WN++ISG + G+ + E + R+M+ E G R
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T + ++ C + ++G+ +H +K L V +V++ + Y K G + S +L
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + KN++ W MI ++NG + LA + D T +L C ++ V
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVV 251
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+L + +HG ++ GF+ + L+++Y G +++ VF + SM WTA++ AY
Sbjct: 252 RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAY 311
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEAS 383
+ R+AI F+LM+ G SP+ TF +L+ C +G VE+ +F+ MS Y I+
Sbjct: 312 ATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPR 371
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H + MV LL R G L +A ++ P
Sbjct: 372 LDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++ I + K G++ + ++FE+ +++ +WN MI NG + L Y + G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T + +L C + ++ + +H + F + + ++L+ +YSK G + S +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + + + WTAM+ + +GF +A+ M D VT T +L C V
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 265 KLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
+ GK E + ++ HY ++++ G G+ +A + +P + S W AL
Sbjct: 353 EEGKHYFETMSKRYRIDPRLDHYSC--MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Query: 321 I---RAYGYKEWYREAID-LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
+ R Y + +A + LF+L +G + + +I +G +DA R +LM
Sbjct: 411 LGACRVYKDTQLGTKAAERLFELEPRDG-----RNYVMLSNIYSASGLWKDASRIRNLM 464
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 167/324 (51%), Gaps = 1/324 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL L+ K G+++ + ++F+ P + + W +MISG G+ REA+ ML++G
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +L +C+ +L +GKE+H Y L+ + + S+L+ MYSKCG + + ++
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+D + + + + +++I ++G + + + R M ++ D+ ++ +L
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDES 668
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LG +VH + K+G + V + L+ MY G D+ F + + WTALI +Y
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA-FRFFDLMSTYEIEAS 383
EA+ +++LM G P+ TF VLS C G VE++ F ++ Y IE
Sbjct: 729 AQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPE 788
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFL 407
H MV L R G+L EA+ F+
Sbjct: 789 NRHYVCMVDALGRSGRLREAESFI 812
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 4/273 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++LI ++ K G++DL+ QVFE+ + + N MI+ + + P +A+ ML+EG
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
R + ++ +L + L L GK+VH Y LK + +T+ SSL +YSKCG + S +
Sbjct: 450 RTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF G+ K+ W +MI E G+L EA+ + M D TL +L VC
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ GKE+HG L+ G + + L+NMY CG A+ V+ +P+ ++ ++LI
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
Y ++ LF M+ +G + ++F ++L
Sbjct: 627 YSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 8/332 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ L+ K G++ A +VF P SV +W M+SG + ALE + M G
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N T+ ++ C + + + +VHA+ K F ++ ++L+ MYSK G I S ++
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Query: 205 F---DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
F D ++++N++ MI S ++ +A+ + M R D ++ +L V L
Sbjct: 409 FEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---L 463
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ LGK+VHG LK G V + L +Y CG + + +F +P K + W ++I
Sbjct: 464 DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMI 523
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
+ + REAI LF M+ +G SP+ T AVL++C + I+
Sbjct: 524 SGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID 583
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSPSL 413
+ + +V + ++ G L A++ + P L
Sbjct: 584 KGMDLGSALVNMYSKCGSLKLARQVYDRLPEL 615
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 144/323 (44%), Gaps = 1/323 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SL+ + G++ A ++F+ P+ V + N MISG + E+L + M G
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N I+ ++ C+ L+ + V + +K + + + S+L+ ++SK + ++F
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF 208
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
NV W +I + N + M + Q+ D+ T + +L C L +++
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR 268
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
GK V +V+K G V +V ++++Y CG A VF +P+ ++WT ++ Y
Sbjct: 269 FGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYT 327
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
A+++F M +G N T +V+S C R V +A + +
Sbjct: 328 KSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSS 387
Query: 386 HCTFMVQLLTRYGKLDEAQRFLE 408
++ + ++ G +D +++ E
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFE 410
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI + K + A +VF +S +V WN +I+G N + M ++
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +L CA L L+ GK V A +K V + ++++ +Y+KCG + ++ +
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + +V+ WT M+ ++ AL + + M+ + + T+T ++ CG V
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD-KGSMTWTALIRA 323
+VH V K GF VAA LI+MY G D ++ VF + D + +I +
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS 427
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICD 360
+ + +AI LF M+ G + F+ ++LS+ D
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD 464
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 158 AKLRTLKQGKEVHAYALKRRFLP-HVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
++L L+ K + A+ L+R LP V + SL+ YS G + + +LFD + + +V+
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
MI ++ E+L M A+ ++ ++ C L+ + V +K
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
+G+ V + LI+++ F++A VF W +I + Y DL
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH---CTFMVQL 393
F M P+++T+ +VL+ C + RF ++ I+ E CT +V L
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASL----EKLRFGKVVQARVIKCGAEDVFVCTAIVDL 294
Query: 394 LTRYGKLDEAQRFLEMSPS 412
+ G + EA P+
Sbjct: 295 YAKCGHMAEAMEVFSRIPN 313
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 171/328 (52%), Gaps = 13/328 (3%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
V L ++ EE + V W+A ISG A G EAL R ML G +PN +T++ +L
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 157 CAKLRTLKQGKEVHAYALKR----RFLPHVT---MVSSLMVMYSKCGVIGYSIRLFDGME 209
CA + L GKE+H YA+K R H +++ L+ MY+KC + + +FD +
Sbjct: 375 CASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 210 KK--NVILWTAMIDSCVENGFLNEALAVMRSM--QLTRQRADTVTLTRMLCVCGELRRVK 265
K +V+ WT MI ++G N+AL ++ M + + R + T++ L C L ++
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 266 LGKEVHGQVLKLGFASVH-YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+GK++H L+ +V +V+ LI+MY CG +A+LVF + K +TWT+L+ Y
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY 554
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEAS 383
G + EA+ +FD M G + T VL C +G ++ +F+ M T + +
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH +V LL R G+L+ A R +E P
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMP 642
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 47/322 (14%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
++L+ ++ + ++ AR+VF+E V +WN++I A G P+ ALE + R+ E G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG------- 196
RP+ IT++ +LP CA L T GK++H +A+ + ++ + + L+ MY+KCG
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 197 ----------------VIGYS--------IRLFDGME----KKNVILWTAMIDSCVENGF 228
V GYS +RLF+ M+ K +V+ W+A I + G
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL-------GFAS 281
EAL V R M + + + VTL +L C + + GKE+H +K G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVP--DKGSMTWTALIRAYGYKEWYREAIDLFDL 339
+ V +LI+MY C D A+ +F ++ ++ +TWT +I Y +A++L
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 340 MMSNGCS--PNTFTFEAVLSIC 359
M C PN FT L C
Sbjct: 466 MFEEDCQTRPNAFTISCALVAC 487
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESP--RRSVSAWNAMISGLAHNGFPREALEYVRLML 139
N S LI + G + A + P V WN++I NG + L LM
Sbjct: 60 NLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH 119
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
P+ T + C ++ +++ G+ HA +L F+ +V + ++L+ MYS+C +
Sbjct: 120 SLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLS 179
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ---RADTVTLTRMLC 256
+ ++FD M +V+ W ++I+S + G AL + M T + R D +TL +L
Sbjct: 180 DARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM--TNEFGCRPDNITLVNVLP 237
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT 316
C L LGK++H + +V L++MY CG+ D A VF + K ++
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
W A++ Y + +A+ LF+ M + T+ A +S
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 338
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K G++ AR VF+ ++ W ++++G +G+ EAL M G + +
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSIRL 204
+T++V+L C+ + QG E + +K F P + L+ + + G + ++RL
Sbjct: 579 GVTLLVVLYACSHSGMIDQGME-YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 205 FDGME-KKNVILWTAMIDSCVENG 227
+ M + ++W A + C +G
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHG 661
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 170/361 (47%), Gaps = 36/361 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++++ + K G DL ++ E + A+NAMISG + GF +EALE VR M+ G
Sbjct: 223 TTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI 282
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGV----- 197
+ T ++ CA L+ GK+VHAY L+R F H +SL+ +Y KCG
Sbjct: 283 ELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD--NSLVSLYYKCGKFDEAR 340
Query: 198 --------------------------IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNE 231
IG + +F M++KN++ W MI ENGF E
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 232 ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
L + M+ + + C L G++ H Q+LK+GF S LI
Sbjct: 401 GLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALIT 460
Query: 292 MYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFT 351
MY CGV + A+ VF +P S++W ALI A G EA+D+++ M+ G P+ T
Sbjct: 461 MYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRIT 520
Query: 352 FEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMS 410
VL+ C AG V+ ++FD M T Y I +H ++ LL R GK +A+ +E
Sbjct: 521 LLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESL 580
Query: 411 P 411
P
Sbjct: 581 P 581
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 150/331 (45%), Gaps = 46/331 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP--RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
++++ + G++ LAR VFE++P R +NAMI+G +HN A+ M EG
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 143 KRPNWITMMVILPICAKL-RTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCG---- 196
+P+ T +L A + KQ + HA ALK ++T VS+ +V +YSKC
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSG-AGYITSVSNALVSVYSKCASSPS 202
Query: 197 VIGYSIRLFDGMEKKNVILWT--------------------------------AMIDSCV 224
++ + ++FD + +K+ WT AMI V
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
GF EAL ++R M + D T ++ C ++LGK+VH VL+ S H+
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG 344
+ L+++Y CG FD A+ +F +P K ++W AL+ Y EA +F M
Sbjct: 323 DNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK- 380
Query: 345 CSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
N ++ ++S GF E+ + F M
Sbjct: 381 ---NILSWMIMISGLAENGFGEEGLKLFSCM 408
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 41/295 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNA--------------------------- 117
+SL+ L++K G D AR +FE+ P + + +WNA
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 118 ----MISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
MISGLA NGF E L+ M EG P + CA L G++ HA
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEAL 233
LK F ++ ++L+ MY+KCGV+ + ++F M + + W A+I + ++G EA+
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAV 503
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ---VLKLGFASVHYVAAELI 290
V M R D +TL +L C V G++ V ++ + HY A LI
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHY--ARLI 561
Query: 291 NMYGACGVFDNAKLVFGAVPDKGSM-TWTALI---RAYGYKEWYREAID-LFDLM 340
++ G F +A+ V ++P K + W AL+ R +G E A D LF L+
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 173/327 (52%), Gaps = 2/327 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL Q++ G+ A ++F R+ + +W MISG +N P +A++ R+M ++ +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IT+ +L CA L L G E+H A+K R + +V + ++L+ MYSKC I ++ +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + +KNVI WT++I N EAL +R M++T Q + +TLT L C + +
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGAL 514
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GKE+H VL+ G ++ L++MY CG + A F + K +W L+ Y
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGY 573
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+ ++LFD M+ + P+ TF ++L C ++ V +F M Y + +
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H +V LL R G+L EA +F++ P
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMP 660
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 1/291 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREAL-EYVRLMLEEGK 143
++ + + + GN+ A VF + R++ +WN ++ G A G+ EA+ Y R++ G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ T +L C + L +GKEVH + ++ + + +V++L+ MY KCG + +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LFD M ++++I W AMI ENG +E L + +M+ D +TLT ++ C L
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+LG+++H V+ GFA V L MY G + A+ +F + K ++WT +I
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDL 374
Y Y +AID + +M + P+ T AVLS C G ++ L
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 122/237 (51%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G+V AR +F+ PRR + +WNAMISG NG E LE M
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T+ ++ C L + G+++HAY + F +++ +SL MY G + +L
Sbjct: 295 PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKL 354
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F ME+K+++ WT MI N ++A+ R M + D +T+ +L C L +
Sbjct: 355 FSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
G E+H +K S VA LINMY C D A +F +P K ++WT++I
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 119 ISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRF 178
+ GL NG EA++ + M E + + ++ +C R ++G +V++ AL
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 179 LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM-R 237
V + ++ + M+ + G + + +F M ++N+ W ++ + G+ +EA+ + R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 238 SMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACG 297
+ + + D T +L CG + + GKEVH V++ G+ V LI MY CG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 298 VFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+A+L+F +P + ++W A+I Y E ++LF M P+ T +V+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 358 ICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
C+ G + T C + Q+ G EA++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 1/311 (0%)
Query: 102 QVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRPNWITMMVILPICAKL 160
VF P R++ +WN +I + +GF ++++ ++R+ E RP+ T+ +IL C+
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI 220
R K G +H LK F + + S+L++MY G + ++ +LFD M ++ +L+TAM
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
V+ G LA+ R M + D+V + +L CG+L +K GK VHG ++
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
+ + +MY C + D A VF + + ++W++LI YG + LFD M
Sbjct: 268 LGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKL 400
+ G PN TF VLS C G VE ++ +F LM Y I +H + ++R G L
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 401 DEAQRFLEMSP 411
+EA++FLE P
Sbjct: 388 EEAEKFLEDMP 398
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ G + AR++F++ P R + AM G G L R M G
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + M+ +L C +L LK GK VH + ++R + + +++ MY KC ++ Y+ +
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
F M +++VI W+++I +G + + + M + VT +L C
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 181 HVTMVSSLMVMYSKCG-VIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV-MRS 238
+V + S L++ YSK + S+ +F M +N+ W +I +GF ++++ + +R
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 239 MQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV 298
+ + R D TL +L C R K G +H LKLGF+S +V++ L+ MY G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 299 FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
+A+ +F +P + S+ +TA+ Y + + +F M +G + ++ ++L
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 359 CDRAG 363
C + G
Sbjct: 245 CGQLG 249
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 175/331 (52%), Gaps = 5/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
S+L+ L+ K G A VF+ + + AW ++ISGL NG +EAL+ M ++
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 144 -RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ M + CA L L+ G +VH +K + +V + SSL+ +YSKCG+ ++
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR-ADTVTLTRMLCVCGEL 261
++F M +N++ W +MI SC L E + ++ L++ D+V++T +L
Sbjct: 532 KVFTSMSTENMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ GK +HG L+LG S ++ LI+MY CG A+ +F + K +TW +I
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
YG A+ LFD M G SP+ TF +++S C+ +GFVE+ F+ M Y I
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
E + EH MV LL R G L+EA F++ P
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 144/280 (51%), Gaps = 5/280 (1%)
Query: 82 NDP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
NDP +SL+ ++ K G V A VF + + WNAM++ A N + AL+ M
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 139 LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
++ P+ T+ ++ C+ L GK VHA KR T+ S+L+ +YSKCG
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 199 GYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLC 256
+ +F ME+K+++ W ++I +NG EAL V M+ + D+ +T +
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT 316
C L ++ G +VHG ++K G +V + LI++Y CG+ + A VF ++ + +
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
W ++I Y +IDLF+LM+S G P++ + +VL
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 143/295 (48%), Gaps = 13/295 (4%)
Query: 83 DP---SSLIQLHFKRGNVDLARQVFEESPR-------RSVSAWNAMISGLAHNGFPREAL 132
DP +SL+ ++ K G +D A QVF+ + R V+ WN+MI G +E +
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 133 EYVRLMLEEGKRPNWITMMVILPICAKLRTLK--QGKEVHAYALKRRFLPHVTMVSSLMV 190
R ML G RP+ ++ +++ + K + +GK++H + L+ + ++L+
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 191 MYSKCGVIGYSIRLFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTV 249
MY K G+ + R+F +E K NV+LW MI +G +L + + + +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
+ T L C + G+++H V+K+G + YV L++MY CG+ A+ VF V
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGF 364
DK W A++ AY ++ A+DLF M P++FT V+S C G
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 85 SSLIQLHFKRG-NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++LI ++FK G ++D R E + +V WN MI G +G +L+ L
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ + L C++ G+++H +K + +SL+ MYSKCG++G +
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F + K + +W AM+ + EN + AL + M+ D+ TL+ ++ C L
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
GK VH ++ K S + + L+ +Y CG +A LVF ++ +K + W +LI
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISG 448
Query: 324 YGYKEWYREAIDLFDLMMSNGCS--PNTFTFEAVLSICDRAGFVEDAFRF 371
++EA+ +F M + S P++ +V + C AG +A RF
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC--AGL--EALRF 494
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI L+ K G ++A +VF ++ AWN+MIS + N P +++ LML +G
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +++ +L + +L +GK +H Y L+ + ++L+ MY KCG Y+ +
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M+ K++I W MI +G AL++ M+ + D VT ++ C V
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 265 KLGKEVHGQVLKLGFA----SVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
+ GK + + +K + HY A ++++ G G+ + A A+P + S W
Sbjct: 695 EEGKNIF-EFMKQDYGIEPNMEHY--ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLC 751
Query: 320 LIRA 323
L+ A
Sbjct: 752 LLSA 755
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 29/293 (9%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRP 145
L +H +RG +A S ++ N+ I L G +AL Y + +G P
Sbjct: 5 LHDVHIRRGLCCVADSYI------SPASINSGIRALIQKGEYLQALHLYSK---HDGSSP 55
Query: 146 NWITMMV---ILPICAKLRTLKQGKEVHA--YALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
W ++ +L C+ L L GK +H L R+ P + +SL+ MY KCG + Y
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIA--TSLVNMYVKCGFLDY 113
Query: 201 SIRLFD-------GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLT- 252
++++FD G+ ++V +W +MID + E + R M + R D +L+
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSI 173
Query: 253 --RMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
++C G RR + GK++HG +L+ + ++ LI+MY G+ +A VF +
Sbjct: 174 VVSVMCKEGNFRREE-GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE 232
Query: 311 DKGSMT-WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
DK ++ W +I +G ++DL+ L +N + +F L C ++
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQS 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF--- 306
T +L C L + GK +HG V+ LG+ ++A L+NMY CG D A VF
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 307 ----GAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI-CDR 361
V + W ++I Y ++E + F M+ G P+ F+ V+S+ C
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 362 AGF-VEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYG-KLDEAQRFLEM 409
F E+ + M ++ T ++ + ++G +D + F+E+
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI 231
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 166/330 (50%), Gaps = 3/330 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K A +F+ + V +W+ +I+ NG EAL M+++G
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T++ +L CA L+QG++ H A+++ V + ++L+ MY KC + +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL-TRQRADTVTLTRMLCVCGELRR 263
F + +K+V+ W A+I NG + ++ M L R D + + ++L C EL
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ K H V+K GF S ++ A L+ +Y CG NA VF + K ++ WT+LI
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 324 YGYKEWYREAIDLFDLMM-SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIE 381
YG +A++ F+ M+ S+ PN TF ++LS C AG + + R F LM + Y +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EH +V LL R G LD A + P
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 162/323 (50%), Gaps = 2/323 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM-LEEGK 143
SSLI ++ K G + A ++F+E + + W++M+SG NG P +A+E+ R M +
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ +T++ ++ C KL + G+ VH + ++R F +++V+SL+ Y+K ++
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF + +K+VI W+ +I V+NG EAL V M + T+ +L C
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G++ H ++ G + V+ L++MY C + A VF +P K ++W ALI
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 324 YGYKEWYREAIDLFDLM-MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
+ +I+ F +M + N P+ VL C GF+E A F + Y ++
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 383 SKEHCTFMVQLLTRYGKLDEAQR 405
+ +V+L +R G L A +
Sbjct: 400 NPFIGASLVELYSRCGSLGNASK 422
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 2/314 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
ARQ+F E +RS+ WN ++ L+ E L + M + ++P+ T+ V L C +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
LR + G+ +H + K L V SSL+ MY KCG + ++R+FD +EK +++ W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
M+ +NG +A+ R M + D VTL ++ C +L +LG+ VHG V++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
GF++ + L+N Y F A +F + +K ++W+ +I Y EA+ +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRY 397
+ MM +G PN T VL C A +E + +L +E + T +V + +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 398 GKLDEAQRFLEMSP 411
+EA P
Sbjct: 313 FSPEEAYAVFSRIP 326
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 173/324 (53%), Gaps = 7/324 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ L+ + G ++ AR F+ R + +WNAMI G N + +LML EGK+
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +L ++ L+ E+H A+K F ++ SL+ Y KCG + + +L
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 205 FDGMEKKNVILWTAMIDS-CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+G +K++++ TA+I +N ++A + + M + + D V ++ ML +C +
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 264 VKLGKEVHGQVLKLGFASVHYVAA---ELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
V +G+++HG LK + + + A LI+MY G ++A L F + +K +WT+L
Sbjct: 332 VTIGRQIHGFALK--SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSL 389
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
I YG + +AIDL++ M PN TF ++LS C G E ++ +D M + +
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHG 449
Query: 380 IEASKEHCTFMVQLLTRYGKLDEA 403
IEA +EH + ++ +L R G L+EA
Sbjct: 450 IEAREEHLSCIIDMLARSGYLEEA 473
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI L+ K+G+V AR++F+ +R V +W AMIS + G+ +AL + M E + N
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T +L C L LK+G ++H K ++ + S+L+ +Y++CG + + FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M++++++ W AMID N + + ++ + M ++ D T +L ++ +++
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
E+HG +KLGF + L+N Y CG NA + + ++ TALI +
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 327 K-EWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ +A D+F M+ + ++L IC
Sbjct: 293 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 106/203 (52%)
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
L +C+ KQ +H ++ F ++ + L+ +Y K G + ++ +LFD + K++V
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ WTAMI G+ +AL + + M +A+ T +L C +L +K G ++HG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA 333
V K A V + L+++Y CG + A+L F ++ ++ ++W A+I Y +
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTS 198
Query: 334 IDLFDLMMSNGCSPNTFTFEAVL 356
LF LM++ G P+ FTF ++L
Sbjct: 199 FSLFQLMLTEGKKPDCFTFGSLL 221
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K G ++ A FEE + V +W ++I+G +G +A++ M E +
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL-PHVTMVSSLMVMYSKCGVI--GYS 201
PN +T + +L C+ + G +++ + + + +S ++ M ++ G + Y+
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 202 -IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
IR +G+ + W A +D+C +G N L+ + + QL
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHG--NVQLSKVAATQL 514
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%)
Query: 270 VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEW 329
+HG + GF S + LI++Y G +A+ +F + + ++WTA+I + +
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 330 YREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF 389
+ +A+ LF M N FT+ +VL C G +++ + + + +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 390 MVQLLTRYGKLDEAQ 404
++ L R GK++EA+
Sbjct: 154 LLSLYARCGKMEEAR 168
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 162/327 (49%), Gaps = 1/327 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
L+QL+ + G++ A +VF E P+ V W+ MI+ NGF EA++ M E P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N T+ IL CA + G+++H +K F + + ++L+ +Y+KC + +++LF
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ KN + W +I G +A ++ R + VT + L C L +
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
LG +VHG +K A V+ LI+MY CG A+ VF + +W ALI Y
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYS 526
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTYEIEASK 384
R+A+ + D+M C PN TF VLS C AG ++ F+ ++ + IE
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCL 586
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH T MV+LL R G+LD+A + +E P
Sbjct: 587 EHYTCMVRLLGRSGQLDKAMKLIEGIP 613
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + G+VD AR VFE + + W ++S NG+ ++L+ + M G
Sbjct: 185 AALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T L L K VH LK ++ + L+ +Y++ G + + ++
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M K +V+ W+ MI +NGF NEA+ + M+ + TL+ +L C +
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LG+++HG V+K+GF YV+ LI++Y C D A +F + K ++W +I Y
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+A +F + N S TF + L C
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ + K G A +F+E P R+ ++ + G A ++ + + EG N
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELN 145
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
L + L + +H+ +K + + + ++L+ YS CG + + +F+
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
G+ K++++W ++ VENG+ ++L ++ M++ + T L L
Sbjct: 206 GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
K VHGQ+LK + V L+ +Y G +A VF +P + W+ +I +
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ EA+DLF M PN FT ++L+ C
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K +D A ++F E ++ +WN +I G + G +A R L
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+T L CA L ++ G +VH A+K V + +SL+ MY+KCG I ++ +
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ ME +V W A+I +G +AL ++ M+ + + +T +L C +
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 265 KLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTAL 320
G+E +++ + HY ++ + G G D A KL+ G + M W A+
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTC--MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 321 IRA 323
+ A
Sbjct: 625 LSA 627
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 16/261 (6%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
C + K +H LK+ + + L+ Y K G ++ LFD M ++N + +
Sbjct: 59 CIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSF 118
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
+ + + + + + + T L + L + ++ +H ++K
Sbjct: 119 VTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVK 174
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
LG+ S +V A LIN Y CG D+A+ VF + K + W ++ Y ++ +++ L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD------LMSTYEIEASKEHCTFM 390
M G PN +TF+ L +A AF F L + Y ++ +
Sbjct: 235 LSCMRMAGFMPNNYTFDTAL----KASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGL 288
Query: 391 VQLLTRYGKLDEAQRFLEMSP 411
+QL T+ G + +A + P
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMP 309
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 164/314 (52%), Gaps = 3/314 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR++F+ P R++ +WNAM+ G H EAL+++ LM +E + + +T++ IL +C+
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM-EKKNVILWTA 218
+ ++ GK+ H + + + +V + ++L+ MY KCG + + F M E ++ + W A
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
++ G +AL+ MQ+ + TL +L C + + LGK +HG +++ G
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
+ + +++MY C FD A VF + + W ++IR +E +LF
Sbjct: 527 YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFM 586
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRY 397
L+ + G P+ TF +L C R G VE F++F MST Y I EH M++L +Y
Sbjct: 587 LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Query: 398 GKLDEAQRFLEMSP 411
G L + + FL + P
Sbjct: 647 GCLHQLEEFLLLMP 660
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 143/294 (48%), Gaps = 5/294 (1%)
Query: 88 IQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNW 147
I+ + K G VD AR++FEE P R +WNA+I+ A NG E R M +G R
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 148 ITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDG 207
+ +L C + L+ +++H +K + +V + +S++ +Y KC V+ + R+FD
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 208 MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
+ + + W ++ +E GF +EA+ + M R T++ ++ C +++G
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K +H +KL + V+ + +MY C ++A+ VF K +WT+ + Y
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
REA +LFDLM N ++ A+L A ++A F LM EIE
Sbjct: 343 GLTREARELFDLMPER----NIVSWNAMLGGYVHAHEWDEALDFLTLMRQ-EIE 391
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 33/307 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ ++ K + AR+VF+E S +WN ++ GF EA+ MLE R
Sbjct: 201 TSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVR 260
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC--------- 195
P T+ ++ C++ L+ GK +HA A+K + + +S+ MY KC
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 196 --------------GVIGYSI--------RLFDGMEKKNVILWTAMIDSCVENGFLNEAL 233
+ GY++ LFD M ++N++ W AM+ V +EAL
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEAL 380
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
+ M+ + D VTL +L VC + V++GK+ HG + + G+ + VA L++MY
Sbjct: 381 DFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMY 440
Query: 294 GACGVFDNAKLVFGAVPD-KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
G CG +A + F + + + ++W AL+ +A+ F+ M P+ +T
Sbjct: 441 GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTL 499
Query: 353 EAVLSIC 359
+L+ C
Sbjct: 500 ATLLAGC 506
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 122/256 (47%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
C+ + Q ++V ++ + LP + +++ + Y KCG + + LF+ M +++ W
Sbjct: 71 CSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSW 130
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
A+I +C +NG +E + R M RA + +L CG + ++L +++H V+K
Sbjct: 131 NAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK 190
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
G++ + ++++YG C V +A+ VF + + ++W ++R Y + EA+ +
Sbjct: 191 YGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVM 250
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTR 396
F M+ P T +V+ C R+ +E + + A T + + +
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVK 310
Query: 397 YGKLDEAQRFLEMSPS 412
+L+ A+R + + S
Sbjct: 311 CDRLESARRVFDQTRS 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+++ ++ K D A +VF+E+ R + WN++I G NG +E E L+ EG +P
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 146 NWITMMVILPICAKLRTLKQG-KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
+ +T + IL C + ++ G + + + K P V ++ +Y K G +
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCL 649
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 171/328 (52%), Gaps = 2/328 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SL++++ + G ++ A++VF+E P R+ W ++ G E LM + G
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVT-MVSSLMVMYSKCGVIGYSIRL 204
+ +T++ ++ C + K GK VH +++R F+ + +S++ MY KC ++ + +L
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ +NV++WT +I + EA + R M + TL +L C L +
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSL 328
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ GK VHG +++ G I+MY CG A+ VF +P++ ++W+++I A+
Sbjct: 329 RHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAF 388
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEAS 383
G + EA+D F M S PN+ TF ++LS C +G V++ ++ F+ M+ Y +
Sbjct: 389 GINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPE 448
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+EH MV LL R G++ EA+ F++ P
Sbjct: 449 EEHYACMVDLLGRAGEIGEAKSFIDNMP 476
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I ++ K +D AR++FE S R+V W +ISG A EA + R ML E
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+ IL C+ L +L+ GK VH Y ++ +S + MY++CG I + +
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M ++NVI W++MI++ NG EAL M+ ++VT +L C V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 265 KLG-KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG-SMTWTALIR 322
K G K+ G A ++++ G G AK +P K + W AL+
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 323 A 323
A
Sbjct: 490 A 490
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 146/333 (43%), Gaps = 7/333 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP--RRSVSAWNAMISGLAHNG---FPREALEYVRLML 139
SSL + + +D A F P +R+ +WN ++SG + + + L Y R M
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNR-MR 101
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
+ ++ + C L L+ G +H A+K + SL+ MY++ G +
Sbjct: 102 RHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTME 161
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ ++FD + +N +LW ++ ++ E + M+ T D +TL ++ CG
Sbjct: 162 SAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACG 221
Query: 260 ELRRVKLGKEVHGQVLKLGFAS-VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
+ K+GK VHG ++ F Y+ A +I+MY C + DNA+ +F D+ + WT
Sbjct: 222 NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
LI + E EA DLF M+ PN T A+L C G + M
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
IE + T + + R G + A+ +M P
Sbjct: 342 GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 7/264 (2%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME--K 210
+L I ++ +TL ++VHA + F V + SSL Y + + ++ F+ + K
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 211 KNVILWTAMID--SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
+N W ++ S + ++ L + M+ D+ L + C L ++ G
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
+HG +K G YVA L+ MY G ++A+ VF +P + S+ W L++ Y
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR--AGFVEDAFRFFDLMSTYEIEASKEH 386
E LF LM G + + T ++ C AG V + ++ I+ S
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF-IDQSDYL 248
Query: 387 CTFMVQLLTRYGKLDEAQRFLEMS 410
++ + + LD A++ E S
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETS 272
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 165/317 (52%), Gaps = 3/317 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI+ + RG ++ A+++F+E P + V +WNAMISG A G +EALE + M++ R
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ TM+ ++ CA+ +++ G++VH + F ++ +V++L+ +YSKCG + + L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + K+VI W +I EAL + + M + + + VT+ +L C L +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 265 KLGKEVHGQVLKL--GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+G+ +H + K G + + LI+MY CG + A VF ++ K +W A+I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIE 381
+ + DLF M G P+ TF +LS C +G ++ F M+ Y++
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 382 ASKEHCTFMVQLLTRYG 398
EH M+ LL G
Sbjct: 504 PKLEHYGCMIDLLGHSG 520
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 34/349 (9%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ HF+ + A VF+ ++ WN M G A + P AL+ M+ G PN
Sbjct: 76 ILSPHFE--GLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALK---------------------------RRF- 178
T +L CAK + K+G+++H + LK + F
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 179 -LPHVTMVS--SLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
PH +VS +L+ Y+ G I + +LFD + K+V+ W AMI E G EAL +
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 236 MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
+ M T R D T+ ++ C + ++LG++VH + GF S + LI++Y
Sbjct: 254 FKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSK 313
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
CG + A +F +P K ++W LI Y + Y+EA+ LF M+ +G +PN T ++
Sbjct: 314 CGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 373
Query: 356 LSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
L C G + D R+ + ++ + L+ Y K + +
Sbjct: 374 LPACAHLGAI-DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
Y+I +F +++ N+++W M + AL + M ++ T +L C
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ + K G+++HG VLKLG YV LI+MY G ++A VF P + +++TA
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 320 LIRAY---GYKE----------------W------------YREAIDLFDLMMSNGCSPN 348
LI+ Y GY E W Y+EA++LF MM P+
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
T V+S C ++G +E + + + ++ + ++ L ++ G+L+ A E
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 409 MSP 411
P
Sbjct: 326 RLP 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN---AKLVFGAVP 310
+L C L+ +++ +H Q++K+G + +Y ++LI F+ A VF +
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 311 DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
+ + W + R + A+ L+ M+S G PN++TF VL C ++ ++ +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 371 FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ + T ++ + + G+L++A + + SP
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 166/321 (51%), Gaps = 4/321 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SS++ L+ K G +D A +F + +R V W M++G A G +A+E+ R M EG
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFG 214
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLP-HVTMVSSLMVMYSKCGVIGYSIR 203
+ + M+ +L L K G+ VH Y L R LP +V + +SL+ MY+K G I + R
Sbjct: 215 RDRVVMLGLLQASGDLGDTKMGRSVHGY-LYRTGLPMNVVVETSLVDMYAKVGFIEVASR 273
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F M K + W ++I +NG N+A + MQ + D VTL +L C ++
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+K G+ VH +LK A L++MY CG +++ +F V K + W +I
Sbjct: 334 LKTGRLVHCYILKRHVLD-RVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC 392
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
YG +E + LF M + P+ TF ++LS +G VE +F +M + Y+I+
Sbjct: 393 YGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQP 452
Query: 383 SKEHCTFMVQLLTRYGKLDEA 403
S++H ++ LL R G+++EA
Sbjct: 453 SEKHYVCLIDLLARAGRVEEA 473
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 128/269 (47%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G + AR+VF+E P+R VS +N+MI + P E L M+ E +P+ T + +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
C L++G+ V A+ + V + SS++ +Y KCG + + LF M K++VI
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
WT M+ + G +A+ R MQ D V + +L G+L K+G+ VHG +
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
+ G V L++MY G + A VF + K +++W +LI + +A
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
+ M S G P+ T VL C + G
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVG 332
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG---YSIRLFDGMEKKNVILWTAMIDSCV 224
++HA+ + L + + +S ++ + CG IG Y+ ++FD + ++ V ++ +MI
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLI--ASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
+E L + M + + D+ T T + C ++ G+ V + + G+ + +
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG 344
V + ++N+Y CG D A+++FG + + + WT ++ + +A++ + M + G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 4/323 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPR--RSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
++ I + K G++D A+ VFE R R+V +WN+M + G +A LML E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ T + + C TL QG+ +H++A+ + +++ + MYSK +
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
LFD M + + WT MI E G ++EALA+ +M + ++ D VTL ++ CG+
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 263 RVKLGKEVHGQVLKLGFASVHY-VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++ GK + + G + + LI+MY CG A+ +F P+K +TWT +I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
Y + EA+ LF M+ PN TF AVL C +G +E + +F +M Y I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 381 EASKEHCTFMVQLLTRYGKLDEA 403
+H + MV LL R GKL+EA
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEA 514
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 133/263 (50%), Gaps = 2/263 (0%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
+ R+++ S SV+AWN I + P E+L R M G PN T + CA
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
+L + + VHA+ +K F V + ++ + M+ KC + Y+ ++F+ M +++ W A
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
M+ ++G ++A ++ R M+L D+VT+ ++ + +KL + +H ++LG
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVP--DKGSMTWTALIRAYGYKEWYREAIDL 336
VA I+ YG CG D+AKLVF A+ D+ ++W ++ +AY +A L
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 337 FDLMMSNGCSPNTFTFEAVLSIC 359
+ LM+ P+ TF + + C
Sbjct: 244 YCLMLREEFKPDLSTFINLAASC 266
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 153/333 (45%), Gaps = 9/333 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++ + + K +VD A +VFE P R + WNAM+SG +G +A R M
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T+M ++ + ++LK + +HA ++ VT+ ++ + Y KCG + + +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 205 FDGMEK--KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
F+ +++ + V+ W +M + G +A + M + D T + C
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+ G+ +H + LG I+MY +A+L+F + + ++WT +I
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
Y K EA+ LF M+ +G P+ T +++S C + G +E ++ D + +I
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARA--DIYG 387
Query: 383 SKEH----CTFMVQLLTRYGKLDEAQRFLEMSP 411
K C ++ + ++ G + EA+ + +P
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G++ AR +F+ +P ++V W MI+G A NG EAL+ M++ +
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYK 456
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN IT + +L CA +L++G E + V +S + YS
Sbjct: 457 PNHITFLAVLQACAHSGSLEKGWEYF------HIMKQVYNISPGLDHYS----------- 499
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
M+D G L EAL ++R+M + D +L C R V
Sbjct: 500 -------------CMVDLLGRKGKLEEALELIRNMS---AKPDAGIWGALLNACKIHRNV 543
Query: 265 KLGKEVHGQVLKLGFA-SVHYVAAELINMYGACGVFD 300
K+ ++ + L + YV E+ N+Y A G++D
Sbjct: 544 KIAEQAAESLFNLEPQMAAPYV--EMANIYAAAGMWD 578
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHN------------------- 125
+ L+ L+ K G + A +F E P R+ +WN MI G +
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 126 ----------------GFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEV 169
G + L+Y LM G + + V +CA+L L ++V
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF-----DGME--------------- 209
H Y +K F ++ ++L+ +Y K G + + LF G+E
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 210 -------------------KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT 250
K NV+ WT++I C G +++L R MQ ++ A++VT
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 251 LTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
+ +L +C EL + LG+E+HG V++ + V L+NMY CG+ LVF A+
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Query: 311 DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
DK ++W ++I+ YG + +A+ +FD M+S+G P+ AVLS C AG VE
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 371 FFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
F MS + +E +EH +V LL R G L EA ++ P
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 146/341 (42%), Gaps = 42/341 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA---WNAMISGLAHNGFPREALEYVRLMLEE 141
++LI ++ + G + AR VFE +S WN+++ +G ALE R M +
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G + + +IL C L + H ++ ++ +V+ L+ +Y K G +G +
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML------ 255
LF M +N + W MI + A+ + MQ + D VT T +L
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 256 -----------------------------CVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
VC EL + + ++VHG V+K GF
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM--MSNG 344
LI++YG G +A+ +F + +KG +W +LI ++ EA+ LF + M++
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 345 CS--PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
C+ N T+ +V+ C+ G +D+ +F M ++ A+
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 162 TLKQGKEVHAYALKRRFLPHV-TMVSSLMVMYSKCGVIGYSIRLFDGMEK---KNVILWT 217
T +Q ++VHA L F+ ++ ++L+ +Y++ G++ + +F+ + ++ LW
Sbjct: 68 TAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWN 127
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
+++ + V +G AL + R M+ D L +L C L R L + H QV+++
Sbjct: 128 SILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQI 187
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G +V EL+ +Y G +A +F +P + M+W +I+ + + A+ +F
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
+ M P+ T+ +VLS + G ED ++F LM
Sbjct: 248 EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 176/332 (53%), Gaps = 5/332 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-- 142
+SL+ ++ K G ++ A +VF RS+ +WNAMI+G H G+ +AL+ +M E
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL--PHVTMVSSLMVMYSKCGVIGY 200
+RP+ T+ +L C+ + GK++H + ++ F T+ SL+ +Y KCG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ + FD +++K +I W+++I + G EA+ + + +Q + D+ L+ ++ V +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
++ GK++ +KL V +++MY CG+ D A+ F + K ++WT +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTYE 379
I YG ++++ +F M+ + P+ + AVLS C +G +++ F L+ T+
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
I+ EH +V LL R G+L EA+ ++ P
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP 477
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 4/276 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K +A +VF+ P R+V +W+A++SG NG + +L M +G PN
Sbjct: 47 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 106
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T L C L L++G ++H + LK F V + +SL+ MYSKCG I + ++F
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT--RQRADTVTLTRMLCVCGELRRV 264
+ +++I W AMI V G+ ++AL MQ ++R D TLT +L C +
Sbjct: 167 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 226
Query: 265 KLGKEVHGQVLKLGF--ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
GK++HG +++ GF S + L+++Y CG +A+ F + +K ++W++LI
Sbjct: 227 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 286
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
Y + + EA+ LF + ++F +++ +
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 7/267 (2%)
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+R N ++ IL +C + QG +VH Y LK ++ + L+ MY KC +
Sbjct: 5 QRQNLVS---ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
++FD M ++NV+ W+A++ V NG L +L++ M + T + L CG L
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++ G ++HG LK+GF + V L++MY CG + A+ VF + D+ ++W A+I
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 323 AYGYKEWYREAIDLFDLMMSNGCS--PNTFTFEAVLSICDRAG--FVEDAFRFFDLMSTY 378
+ + + +A+D F +M P+ FT ++L C G + F + S +
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQR 405
+S +V L + G L A++
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARK 268
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 174/363 (47%), Gaps = 36/363 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-K 143
+++I LH + G +DLA FE+ R + WN+MISG G+ AL+ ML +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ T+ +L CA L L GK++H++ + F ++++L+ MYS+CG + + R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 204 L---------------------------------FDGMEKKNVILWTAMIDSCVENGFLN 230
L F ++ ++V+ WTAMI ++G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 231 EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELI 290
EA+ + RSM QR ++ TL ML V L + GK++HG +K G V+ LI
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 291 NMYGACGVFDNAKLVFGAVP-DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNT 349
MY G +A F + ++ +++WT++I A EA++LF+ M+ G P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLMSTYE-IEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
T+ V S C AG V ++FD+M + I + H MV L R G L EAQ F+E
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 409 MSP 411
P
Sbjct: 576 KMP 578
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 177/424 (41%), Gaps = 103/424 (24%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ + KRG++D + F++ P+R +W MI G + G +A+ + M++EG
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG-------- 196
P T+ +L A R ++ GK+VH++ +K +V++ +SL+ MY+KCG
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 197 --------------VIGYSIRL---------FDGMEKKNVILWTAMIDSCVENGFLNEAL 233
+I +++ F+ M +++++ W +MI + G+ AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 234 AVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
+ M + + D TL +L C L ++ +GK++H ++ GF V LI+M
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 293 YGAC---------------------------------GVFDNAKLVFGAVPDKGSMTWTA 319
Y C G + AK +F ++ D+ + WTA
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF--------------------------- 352
+I Y Y EAI+LF M+ G PN++T
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 353 --------EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
A++++ +AG + A R FDL+ E T M+ L ++G +EA
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLI---RCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 405 RFLE 408
E
Sbjct: 501 ELFE 504
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + K G+++ A+ +F R V AW AMI G +G EA+ R M+ G+R
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+ +L + + L +L GK++H A+K + V++ ++L+ MY+K G I + R
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 205 FDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
FD + +++ + WT+MI + ++G EAL + +M + R D +T + C
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 264 VKLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
V G+ ++ V K+ HY A +++++G G+ A+ +P + +TW +
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSHY--ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGS 588
Query: 320 LIRA 323
L+ A
Sbjct: 589 LLSA 592
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 175/368 (47%), Gaps = 40/368 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL++ + + GN +A +VF P VS++N MI G A GF EAL+ M+ +G
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE 229
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRR--FLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ T++ +L C L ++ GK VH + +R + ++ + ++L+ MY KC G +
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ---------------------- 240
R FD M+KK++ W M+ V G + A AV M
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 241 -----------LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
+ + + D VT+ ++ + G+ VHG V++L ++++ L
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNT 349
I+MY CG+ + A +VF +K WT++I + ++A+ LF M G +PN
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEA----Q 404
T AVL+ C +G VE+ F+ M + + EH +V LL R G+++EA Q
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 405 RFLEMSPS 412
+ + M PS
Sbjct: 530 KKMPMRPS 537
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE--YVRLMLEEGKRPNWITMMV 152
G+++ A+ VF++ P+R + +WN+++ G + G + + + + + E +P+ +TM+
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
++ A L G+ VH ++ + + S+L+ MY KCG+I + +F +K+
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD 433
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V LWT+MI +G +AL + MQ + VTL +L C V+ G V
Sbjct: 434 VALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFN 493
Query: 273 QVL-KLGF--ASVHYVAAELINMYGACGVFDNAK-LVFGAVPDKGSMT-WTALIRA 323
+ K GF + HY L+++ G + AK +V +P + S + W +++ A
Sbjct: 494 HMKDKFGFDPETEHY--GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 10/271 (3%)
Query: 96 NVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
N+DLA+ +F +P +V +N MIS ++ + E M+ P+ T + ++
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
+ L +KQ +H + + L + +SL+ Y + G G + ++F M +V
Sbjct: 141 KASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ MI + GF EAL + M D T+ +L CG L ++LGK VHG
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 274 VLKLG--FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+ + G ++S ++ L++MY C AK F A+ K +W ++ +
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 332 EAIDLFDLMMSNG-CSPNTFTFEAVLSICDR 361
A +FD M S N+ F CD+
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI ++ K G ++ A VF+ + + V+ W +MI+GLA +G ++AL+ M EEG
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVT 466
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T++ +L C+ +++G V + + F P SL+ + + G + +
Sbjct: 467 PNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK- 525
Query: 204 LFDGMEKKNVI-----LWTAMIDSC 223
D ++KK + +W +++ +C
Sbjct: 526 --DIVQKKMPMRPSQSMWGSILSAC 548
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 171/326 (52%), Gaps = 1/326 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ +H K G + AR++F+E P R++ ++ ++ISG + G EA E ++M EE
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE 223
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T V+L A L ++ GK++H ALK + + + L+ MYSKCG I + F+
Sbjct: 224 THTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M +K + W +I +G+ EAL ++ M+ + D TL+ M+ + +L +++L
Sbjct: 284 CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLEL 343
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
K+ H +++ GF S L++ Y G D A+ VF +P K ++W AL+ Y
Sbjct: 344 TKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYAN 403
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKE 385
+A+ LF+ M++ +PN TF AVLS C +G E + F MS + I+
Sbjct: 404 HGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM 463
Query: 386 HCTFMVQLLTRYGKLDEAQRFLEMSP 411
H M++LL R G LDEA F+ +P
Sbjct: 464 HYACMIELLGRDGLLDEAIAFIRRAP 489
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 129/263 (49%)
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ C +L++++ K V+ + + F P M++ +++M+ KCG+I + RLFD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
++N+ + ++I V G EA + + M +T T ML L + +GK
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
++H LKLG +V+ LI+MY CG ++A+ F +P+K ++ W +I Y
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCT 388
+ EA+ L M +G S + FT ++ I + +E + + E+ T
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANT 364
Query: 389 FMVQLLTRYGKLDEAQRFLEMSP 411
+V +++G++D A+ + P
Sbjct: 365 ALVDFYSKWGRVDTARYVFDKLP 387
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + K G VD AR VF++ PR+++ +WNA++ G A++G +A++ M+
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 145 PNWITMMVILPICAKLRTLKQGKEV-----HAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
PN +T + +L CA +QG E+ + +K R + + M+ L + G++
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELL----GRDGLLD 479
Query: 200 YSIRLFDGME-KKNVILWTAMIDSC 223
+I K V +W A++++C
Sbjct: 480 EAIAFIRRAPLKTTVNMWAALLNAC 504
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 166/311 (53%), Gaps = 3/311 (0%)
Query: 103 VFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRT 162
+F + ++ W +I+G H G L+ + ML E + + + A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
+ GK++HA +KR F ++ +++S++ +Y +CG + + F ME K++I W +I S
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-S 287
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
+E +EAL + + + + T T ++ C + + G+++HG++ + GF
Sbjct: 288 ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSM-TWTALIRAYGYKEWYREAIDLFDLMM 341
+A LI+MY CG +++ VFG + D+ ++ +WT+++ YG + EA++LFD M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKL 400
S+G P+ F AVLS C AG VE ++F++M S Y I ++ +V LL R GK+
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 401 DEAQRFLEMSP 411
EA +E P
Sbjct: 468 GEAYELVERMP 478
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 2/322 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI +F++G V+ AR +F+E P R V AW AMI+G A + + A E M+++G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV-IGYSIR 203
PN T+ +L C ++ L G VH +K + + +++M MY+ C V + +
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F ++ KN + WT +I G L + + M L +T + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
V GK++H V+K GF S V ++++Y CG AK F + DK +TW LI
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
+ EA+ +F S G PN +TF ++++ C + + + +
Sbjct: 289 LERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 384 KEHCTFMVQLLTRYGKLDEAQR 405
E ++ + + G + ++QR
Sbjct: 348 VELANALIDMYAKCGNIPDSQR 369
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 165 QGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCV 224
Q E Y K+ H + ++L+V Y + G++ + LFD M ++V+ WTAMI
Sbjct: 32 QNTEYPPYKPKK----HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYA 87
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
+ + A M + TL+ +L C ++ + G VHG V+KLG Y
Sbjct: 88 SSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLY 147
Query: 285 VAAELINMYGACGV-FDNAKLVFGAVPDKGSMTWTALIRAY 324
V ++NMY C V + A L+F + K +TWT LI +
Sbjct: 148 VDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGF 188
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++LI ++ K GN+ +++VF E RR++ +W +M+ G +G+ EA+E M+ G
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 144 RPNWITMMVILPICAKLRTLKQG-KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
RP+ I M +L C +++G K + + P + + ++ + + G IG +
Sbjct: 412 RPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAY 471
Query: 203 RLFDGME-KKNVILWTAMIDSC---VENGFLNEALAVMRSMQLTRQRADTVTL 251
L + M K + W A++ +C NG ++ LA + M+L + T +
Sbjct: 472 ELVERMPFKPDESTWGAILGACKAHKHNGLISR-LAARKVMELKPKMVGTYVM 523
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
H +A LI Y G+ + A+ +F +PD+ + WTA+I Y + A + F M+
Sbjct: 45 HILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 343 NGCSPNTFTFEAVLSIC 359
G SPN FT +VL C
Sbjct: 105 QGTSPNEFTLSSVLKSC 121
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 168/312 (53%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
+R+ FE+SP++S + W+++IS A N P +LE+++ M+ RP+ + CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
L G+ VH ++K + V + SSL+ MY+KCG I Y+ ++FD M ++NV+ W+ M
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
+ + G EAL + + + + + ++ VC ++LG+++HG +K F
Sbjct: 189 MYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSF 248
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
S +V + L+++Y CGV + A VF VP K W A+++AY ++ I+LF
Sbjct: 249 DSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKR 308
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
M +G PN TF VL+ C AG V++ +FD M IE + +H +V +L R G+
Sbjct: 309 MKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGR 368
Query: 400 LDEAQRFLEMSP 411
L EA + P
Sbjct: 369 LQEALEVITNMP 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K G + AR++F+E P+R+V W+ M+ G A G EAL + L E
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N + ++ +CA L+ G+++H ++K F + SSL+ +YSKCGV + ++
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + KN+ +W AM+ + ++ + + + + M+L+ + + +T +L C V
Sbjct: 275 FNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLV 334
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALI 321
G+ Q+ + A L++M G G A V +P D W AL+
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%)
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N+ + +L A+ R+ +G ++H Y +K + ++L+ YSK + S R F
Sbjct: 14 NYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAF 73
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ +K+ W+++I +N +L ++ M R D L C L R
Sbjct: 74 EDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCD 133
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
+G+ VH +K G+ + +V + L++MY CG A+ +F +P + +TW+ ++ Y
Sbjct: 134 IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA 193
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
EA+ LF + + N ++F +V+S+C + +E
Sbjct: 194 QMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 160/328 (48%), Gaps = 5/328 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI ++ K G + AR+VF P SV + NA+I+G + N EA+ + ML G
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVN 626
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVS-SLMVMYSKCGVIGYSIR 203
P+ IT I+ C K +L G + H KR F + SL+ MY + +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 204 LFDGMEK-KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
LF + K+++LWT M+ +NGF EAL + M+ D T +L VC L
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWTALI 321
++ G+ +H + L + LI+MY CG + VF + + + ++W +LI
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
Y + +A+ +FD M + P+ TF VL+ C AG V D + F++M Y I
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLE 408
EA +H MV LL R+G L EA F+E
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIE 894
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 142/277 (51%), Gaps = 1/277 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K ++ A +VFE ++ WNAMI G AHNG + +E M G
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T +L CA L+ G + H+ +K++ ++ + ++L+ MY+KCG + + ++
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M ++ + W +I S V++ +EA + + M L +D L L C + +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK+VH +K G + + LI+MY CG+ +A+ VF ++P+ ++ ALI Y
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
EA+ LF M++ G +P+ TF ++ C +
Sbjct: 606 SQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
++I + + G + AR +F E V AWN MISG G A+EY M + +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
T+ +L + L G VHA A+K ++ + SSL+ MYSKC + + ++F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ +E+KN + W AMI NG ++ + + M+ + D T T +L C ++
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
+G + H ++K A +V L++MY CG ++A+ +F + D+ ++TW +I +Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
E EA DLF M G + + L C
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 142/323 (43%), Gaps = 35/323 (10%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+L+ ++ K + AR+VFE + W + SG G P EA+ M +EG RP
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ + + ++ +L LK + LF
Sbjct: 260 DHLAFVTVINTYIRLGKLKDAR-----------------------------------LLF 284
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
M +V+ W MI + G A+ +M+ + ++ TL +L G + +
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
LG VH + +KLG AS YV + L++MY C + A VF A+ +K + W A+IR Y
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
+ + ++LF M S+G + + FTF ++LS C + +E +F ++ ++ +
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 386 HCTFMVQLLTRYGKLDEAQRFLE 408
+V + + G L++A++ E
Sbjct: 465 VGNALVDMYAKCGALEDARQIFE 487
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMID 221
L+ GK VH+ +L + ++++ +Y+KC + Y+ + FD +EK +V W +M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLS 133
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFAS 281
G + L S+ + + T + +L C V+ G+++H ++K+G
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM 341
Y L++MY C +A+ VF + D ++ WT L Y EA+ +F+ M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
G P+ F V++ R G ++DA F MS+ ++ A
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA 294
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ L+ K V A + F+ + V+AWN+M+S + G P + L + E
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T ++L CA+ ++ G+++H +K + +L+ MY+KC I + R+
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + N + WT + V+ G EA+ V M+ R D
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD----------------- 260
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
L F +V IN Y G +A+L+FG + + W +I +
Sbjct: 261 -----------HLAFVTV-------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
G + AI+ F M + T +VLS
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 165/331 (49%), Gaps = 4/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSV---SAWNAMISGLAHNGFPREALEYVRLMLEE 141
S LI L +DLAR++F++ S+ W AM G + NG PR+AL ML
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
P ++ V L C L+ L+ G+ +HA +KR+ + + L+ +Y + G+ +
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
++FDGM ++NV+ W ++I + ++E + R MQ TLT +L C +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ GKE+H Q+LK + L++MYG CG + ++ VF + K +W ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEI 380
Y E I+LF+ M+ +G +P+ TF A+LS C G E F+ M T + +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EH +V +L R GK+ EA + +E P
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETMP 501
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 123/241 (51%), Gaps = 6/241 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L++L+ + G D AR+VF+ R+V WN++IS L+ E R M EE +
Sbjct: 277 LLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFS 336
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
W T+ ILP C+++ L GKE+HA LK + P V +++SLM MY KCG + YS R+FD
Sbjct: 337 WATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFD 396
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M K++ W M++ NG + E + + M + D +T +L C + +
Sbjct: 397 VMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEY 456
Query: 267 GKEVHGQV---LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTALIR 322
G + ++ ++ A HY A L+++ G G A V +P K S + W +L+
Sbjct: 457 GLSLFERMKTEFRVSPALEHY--ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLN 514
Query: 323 A 323
+
Sbjct: 515 S 515
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 2/296 (0%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
+N++I + P + Y R ML P+ T ++ CA L L+ GK VH +A+
Sbjct: 75 FNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAV 134
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALA 234
F + ++L+ YSKCG + + ++FD M +K+++ W +++ +NG +EA+
Sbjct: 135 VSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQ 194
Query: 235 VMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYG 294
V M+ + D+ T +L C + V LG VH ++ G + LIN+Y
Sbjct: 195 VFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYS 254
Query: 295 ACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN-GCSPNTFTFE 353
CG A+ VF + + WTA+I AYG + ++A++LF+ M + G PN TF
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 354 AVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
AVLS C AG VE+ + M+ +Y + EH MV +L R G LDEA +F+
Sbjct: 315 AVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 127/247 (51%), Gaps = 10/247 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + K G+++ ARQVF+ P +S+ AWN+++SG NG EA++ M E G
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T + +L CA+ + G VH Y + +V + ++L+ +YS+CG +G + +
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT-RQRADTVTLTRMLCVCGELRR 263
FD M++ NV WTAMI + +G+ +A+ + M+ + VT +L C
Sbjct: 266 FDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325
Query: 264 VKLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT---- 316
V+ G+ V+ ++ K L H+V +++M G G D A + G T
Sbjct: 326 VEEGRSVYKRMTKSYRLIPGVEHHVC--MVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383
Query: 317 WTALIRA 323
WTA++ A
Sbjct: 384 WTAMLGA 390
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 116/246 (47%)
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
+KQ ++VHA+ + + ++++ L+ + I Y+ LF + + L+ ++I S
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
+ +A R M + T T ++ C +L +++GK VH + GF
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
YV A L+ Y CG + A+ VF +P+K + W +L+ + EAI +F M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDE 402
+G P++ TF ++LS C + G V + + ++ + + T ++ L +R G + +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 403 AQRFLE 408
A+ +
Sbjct: 262 AREVFD 267
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 170/361 (47%), Gaps = 34/361 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++L+ ++ K G A QVF+E P R AW ++++ L + L +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RP+ ++ CA L ++ G++VH + + + + SSL+ MY+KCG++ +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM------------------------ 239
+FD + KN I WTAM+ ++G EAL + R +
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 240 -----QLTRQRADTV---TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
++ R+R D + L+ ++ C L G++VHG V+ LGF S +++ LI+
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 292 MYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFT 351
MY C AK +F + + ++WT+LI +A+ L+D M+S+G PN T
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 352 FEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMS 410
F ++ C GFVE F M+ Y I S +H T ++ LL R G LDEA+ +
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 411 P 411
P
Sbjct: 402 P 402
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 121/229 (52%), Gaps = 5/229 (2%)
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
L +CA+ RTL K +HA+ +K + + ++L+ +Y KCG +++++FD M ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHG 272
I W +++ + + + L+V S+ + R D + ++ C L + G++VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+ +A+ V + L++MY CG+ ++AK VF ++ K +++WTA++ Y E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
A++LF ++ N +++ A++S ++G +AF F M ++
Sbjct: 190 ALELFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVD 234
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 3/320 (0%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G++ ARQVF+E + + WN + G N P E+L + M + G RP+ T ++
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
++L G +HA+ +K F + + L++MY K G + + LF+ M+ K+++
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
W A + CV+ G AL M + D+ T+ ML CG+L +++G+E++ +
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
K V ++M+ CG + A+++F + + ++W+ +I Y REA+
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM---STYEIEASKEHCTFMV 391
LF M + G PN TF VLS C AG V + R+F LM + +E KEH MV
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 392 QLLTRYGKLDEAQRFLEMSP 411
LL R G L+EA F++ P
Sbjct: 357 DLLGRSGLLEEAYEFIKKMP 376
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ ++ K G + A +FE + + AWNA ++ G ALEY M + +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T++ +L C +L +L+ G+E++ A K ++ + ++ + M+ KCG + L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M+++NV+ W+ MI NG EAL + +MQ R + VT +L C V
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 265 KLGKE-----VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWT 318
GK V L HY A ++++ G G+ + A +P + + W
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHY--ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWG 385
Query: 319 ALIRA 323
AL+ A
Sbjct: 386 ALLGA 390
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 164 KQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSC 223
KQ K++HA L+ F ++++ L+ G + Y+ ++FD M K + LW +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH 283
V N E+L + + M+ R D T ++ +L G +H V+K GF +
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 284 YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
VA EL+ MY G +A+ +F ++ K + W A + A++ F+ M ++
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQ 392
++FT ++LS C + G +E +D EI+ C +V+
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID-----CNIIVE 248
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 164/324 (50%), Gaps = 2/324 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G + + +V E P + V W MISGL G +AL ML+ G
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + ++ CA+L + G VH Y L+ + ++SL+ MY+KCG + S+ +
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL-TRQRADTVTLTRMLCVCGELRR 263
F+ M +++++ W A+I +N L +AL + M+ T Q+ D+ T+ +L C
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ +GK +H V++ V L++MY CG + A+ F ++ K ++W LI
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
YG+ A++++ + +G PN F AVLS C G V+ + F M + +E
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRF 406
+ EH +V LL R ++++A +F
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKF 607
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 155/326 (47%), Gaps = 9/326 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ L+ K +V A+ +F++ +R + +WN MISG A G E L+ + M +G R
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T L + + L+ G+ +H +K F + + ++L+ MY KCG S R+
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ + K+V+ WT MI + G +AL V M + + + ++ C +L
Sbjct: 303 LETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSF 362
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LG VHG VL+ G+ LI MY CG D + ++F + ++ ++W A+I Y
Sbjct: 363 DLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGY 422
Query: 325 GYKEWYREAIDLFDLMMSNGCSP-NTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
+A+ LF+ M ++FT ++L C AG A L+ I +
Sbjct: 423 AQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAG----ALPVGKLIHCIVIRSF 478
Query: 384 KEHC----TFMVQLLTRYGKLDEAQR 405
C T +V + ++ G L+ AQR
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQR 504
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 3/279 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ L+ K G + AR+VFEE R V W AMI + G EA V M +G +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P +T++ +L + + + Q + +H +A+ F + +++S++ +Y KC +G + L
Sbjct: 145 PGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD ME+++++ W MI G ++E L ++ M+ R D T L V G + +
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL 261
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
++G+ +H Q++K GF ++ LI MY CG + + V +P+K + WT +I
Sbjct: 262 EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
+A+ +F M+ +G ++ +V++ C + G
Sbjct: 322 MRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 3/306 (0%)
Query: 107 SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQG 166
S S +N+ I+ L+ +G ++ L ML P+ T +L CA L+ L G
Sbjct: 6 SVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFG 65
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
+H L F + SSL+ +Y+K G++ ++ ++F+ M +++V+ WTAMI
Sbjct: 66 LSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRA 125
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
G + EA +++ M+ + VTL ML E+ +++ +H + GF V
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVM 182
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
++N+Y C +AK +F + + ++W +I Y E + L M +G
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRF 406
P+ TF A LS+ +E + + T ++ + + GK + + R
Sbjct: 243 PDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRV 302
Query: 407 LEMSPS 412
LE P+
Sbjct: 303 LETIPN 308
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 164/323 (50%), Gaps = 6/323 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK-RP 145
L+ + K ++ AR++F+E +V +W ++ISG G P+ AL + M E+ P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N T + C+ L + GK +HA ++ + SSL+ MY KC + + R+F
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 206 DGM--EKKNVILWTAMIDSCVENGFLNEALAVMRSMQ--LTRQRADTVTLTRMLCVCGEL 261
D M +NV+ WT+MI + +N +EA+ + RS LT RA+ L ++ C L
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
R++ GK HG V + G+ S VA L++MY CG A+ +F + +++T++I
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEI 380
A A+ LFD M++ +PN T VL C +G V + + LM+ Y +
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 381 EASKEHCTFMVQLLTRYGKLDEA 403
H T +V +L R+G++DEA
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEA 392
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 23/267 (8%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEE--SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE- 140
SSL+ ++ K +V+ AR+VF+ R+V +W +MI+ A N EA+E R
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 141 -EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
R N + ++ C+ L L+ GK H + + + + +SL+ MY+KCG +
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ ++F + +VI +T+MI + ++G A+ + M R + VTL +L C
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 260 E-------LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV--- 309
L + L E +G V S HY +++M G G D A + +
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPD----SRHYTC--VVDMLGRFGRVDEAYELAKTIEVG 402
Query: 310 PDKGSMTWTALI---RAYGYKEWYREA 333
++G++ W AL+ R +G E EA
Sbjct: 403 AEQGALLWGALLSAGRLHGRVEIVSEA 429
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
+H LK F V+ L++ Y K I + +LFD M + NV+ WT++I + G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 229 LNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
AL++ + M R + T + C L ++GK +H ++ G V++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGS--MTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
L++MYG C + A+ VF ++ G ++WT++I AY EAI+LF +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 346 S--PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
S N F +V+S C G ++ L++ E++ T ++ + + G L A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 404 QRFL 407
++
Sbjct: 291 EKIF 294
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 10/337 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ ++ G V+ +VFE+ P+ +V AW ++ISG +N +A+E R M G +
Sbjct: 146 TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPH--------VTMVSSLMVMYSKCG 196
N M+ +L C + + + GK H + F P+ V + +SL+ MY+KCG
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 197 VIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ + LFDGM ++ ++ W ++I +NG EAL + M D VT ++
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT 316
+LG+ +H V K GF + L+NMY G ++AK F + K ++
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 385
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFF-DL 374
WT +I EA+ +F M G +P+ T+ VL C G VE+ R+F ++
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 375 MSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ +E + EH MV +L+R G+ +EA+R ++ P
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 156/314 (49%), Gaps = 24/314 (7%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILP 155
N+ AR VFE SV WN+MI G +++ P +AL + + ML +G P++ T +L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 156 ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
C+ LR ++ G VH + +K F ++ + + L+ MY CG + Y +R+F+ + + NV+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W ++I V N ++A+ R MQ +A+ + +L CG + + GK HG +
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 276 KLGF-----ASVHY---VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
LGF + V + +A LI+MY CG A+ +F +P++ ++W ++I Y
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVL----------------SICDRAGFVEDAFRF 371
EA+ +F M+ G +P+ TF +V+ + + GFV+DA
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 372 FDLMSTYEIEASKE 385
L++ Y E
Sbjct: 356 CALVNMYAKTGDAE 369
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 123/242 (50%), Gaps = 3/242 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K G++ AR +F+ P R++ +WN++I+G + NG EAL ML+ G
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T + ++ + G+ +HAY K F+ +V +L+ MY+K G + +
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGELRR 263
F+ +EKK+ I WT +I +G NEAL++ + MQ D +T +L C +
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434
Query: 264 VKLGKEVHGQVLKL-GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTALI 321
V+ G+ ++ L G ++++ G F+ A+ + +P K ++ W AL+
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494
Query: 322 RA 323
Sbjct: 495 NG 496
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 176/367 (47%), Gaps = 40/367 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLE 140
S+L+ + ++G ++ ++ E + A WN ++SG +G+ +EA+ + +
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G P+ +T+ +LP L G+ +H Y +K+ L ++S+++ MY K G +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 201 SIRLFDGME-----------------------------------KKNVILWTAMIDSCVE 225
I LF+ E + NV+ WT++I C +
Sbjct: 306 IISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ 365
Query: 226 NGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
NG EAL + R MQ+ + + VT+ ML CG + + G+ HG +++ +V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 286 AAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
+ LI+MY CG + +++VF +P K + W +L+ + +E + +F+ +M
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 346 SPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
P+ +F ++LS C + G ++ +++F +MS Y I+ EH + MV LL R GKL EA
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 405 RFLEMSP 411
++ P
Sbjct: 546 DLIKEMP 552
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 126/243 (51%), Gaps = 18/243 (7%)
Query: 93 KRGNVDLARQVFE----ESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
+ G VD A ++FE ++ +V +W ++I+G A NG EALE R M G +PN +
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T+ +LP C + L G+ H +A++ L +V + S+L+ MY+KCG I S +F+ M
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL------- 261
KN++ W ++++ +G E +++ S+ TR + D ++ T +L CG++
Sbjct: 450 PTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGW 509
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
+ K+ E +G +L HY ++N+ G G A + +P + S W AL
Sbjct: 510 KYFKMMSEEYGIKPRLE----HYSC--MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 321 IRA 323
+ +
Sbjct: 564 LNS 566
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 125/311 (40%), Gaps = 35/311 (11%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A V + P ++ +++++I L +++ M G P+ + + +CA+
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
L K GK++H + + S+ MY +CG +G + ++FD M K+V+ +A+
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRA--------------------------------- 246
+ + G L E + ++ M+ + A
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 247 --DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKL 304
D VT++ +L G+ + +G+ +HG V+K G V + +I+MYG G
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 305 VFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGF 364
+F + A I +A+++F+L N ++ ++++ C + G
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 365 VEDAFRFFDLM 375
+A F M
Sbjct: 369 DIEALELFREM 379
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%)
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
+ HA LK + + L+ YS + + + + ++++I + +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
+++ V M D+ L + VC EL K+GK++H G +V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSP 347
+ +MY CG +A+ VF + DK +T +AL+ AY K E + + M S+G
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 348 NTFTFEAVLSICDRAGFVEDAFRFF 372
N ++ +LS +R+G+ ++A F
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMF 240
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 167/322 (51%), Gaps = 9/322 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVS--AWNAMISGLAHNGFPREALEYVRLMLEEG 142
S L++L+ G ++A +VF+ +R S AWN++ISG A G +A+ M E+G
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ T +L C + +++ G+ +H +K F V ++++L+VMY+KCG I +
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FD + K+ + W +M+ + +G L+EAL + R M D V ++ +L +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA---RVL 307
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
K G+++HG V++ G VA LI +Y G A +F + ++ +++W A+I
Sbjct: 308 SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIIS 367
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIE 381
A+ + F+ M P+ TF +VLS+C G VED R F LMS Y I+
Sbjct: 368 AHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGID 424
Query: 382 ASKEHCTFMVQLLTRYGKLDEA 403
EH MV L R G ++EA
Sbjct: 425 PKMEHYACMVNLYGRAGMMEEA 446
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 2/207 (0%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C LR + G VH ++ + S L+ +Y+ CG + +FD M K++
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 213 V--ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
W ++I E G +A+A+ M + D T R+L CG + V++G+ +
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
H ++K GF YV L+ MY CG A+ VF +P K ++W +++ Y +
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLL 277
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLS 357
EA+D+F LM+ NG P+ +VL+
Sbjct: 278 HEALDIFRLMVQNGIEPDKVAISSVLA 304
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 167/327 (51%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G+++ AR+VFE+ P+R W +ISG + + P +AL + ML G
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+ ++ A R G ++H + +K F +V + S+L+ +Y++ G++ + +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD +E +N + W A+I +AL + + M R + + C +
Sbjct: 219 FDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFL 278
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ GK VH ++K G V + L++MY G +A+ +F + + ++W +L+ AY
Sbjct: 279 EQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+ +EA+ F+ M G PN +F +VL+ C +G +++ + +++LM I
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
H +V LL R G L+ A RF+E P
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMP 425
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
+L C + L QG+ VHA+ L+ F + M ++L+ MY+KCG + + ++F+ M ++
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+ + WT +I ++ +AL M + TL+ ++ RR G ++H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G +K GF S +V + L+++Y G+ D+A+LVF A+ + ++W ALI + +
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF-- 389
+A++LF M+ +G P+ F++ ++ C GF+E + Y I++ ++ F
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG----KWVHAYMIKSGEKLVAFAG 300
Query: 390 --MVQLLTRYGKLDEAQRFLE 408
++ + + G + +A++ +
Sbjct: 301 NTLLDMYAKSGSIHDARKIFD 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 246 ADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLV 305
AD +L C + + G+ VH +L+ F + L+NMY CG + A+ V
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 306 FGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL--SICDRAG 363
F +P + +TWT LI Y + +A+ F+ M+ G SPN FT +V+ + +R G
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 364 FVEDAFRFFDLMSTYEIEASKEHC-TFMVQLLTRYGKLDEAQ 404
F + ++ S H + ++ L TRYG +D+AQ
Sbjct: 178 CCGHQLHGFCVKCGFD---SNVHVGSALLDLYTRYGLMDDAQ 216
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 174/357 (48%), Gaps = 34/357 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+SL+ ++ G +++ +VF+E P+R V +WN +IS NG +A+ + M +E
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ + T++ L C+ L+ L+ G+ ++ + + F V + ++L+ M+ KCG + +
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 204 LFDGMEKKNV-------------------------------ILWTAMIDSCVENGFLNEA 232
+FD M KNV +LWTAM++ V+ +EA
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 233 LAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
L + R MQ R D L +L C + ++ GK +HG + + V L++M
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y CG + A VF + ++ + +WT+LI A+DL+ M + G + TF
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 353 EAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
AVL+ C+ GFV + + F M+ + ++ EHC+ ++ LL R G LDEA+ ++
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 33/325 (10%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
S+ +N M+ LA + L + +G P+ T+ V+L +LR + +G++VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLN 230
YA+K + +SLM MY+ G I + ++FD M +++V+ W +I S V NG
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 231 EALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
+A+ V + M Q + + D T+ L C L+ +++G+ ++ V+ SV + L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR-IGNAL 188
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY------------------------- 324
++M+ CG D A+ VF ++ DK WT+++ Y
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 325 ----GYKEWYR--EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
GY ++ R EA++LF M + G P+ F ++L+ C + G +E ++
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEA 403
+ K T +V + + G ++ A
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETA 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 208 MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
++ +++++ M+ S + + LA+ ++ D TL +L G LR+V G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
++VHG +K G YV+ L+ MY + G + VF +P + ++W LI +Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 328 EWYREAIDLFDLM-MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
+ +AI +F M + + T + LS C +E R + + T E E S
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRI 184
Query: 387 CTFMVQLLTRYGKLDEAQ 404
+V + + G LD+A+
Sbjct: 185 GNALVDMFCKCGCLDKAR 202
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 163/327 (49%), Gaps = 2/327 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI + + G++ AR+VF+E P R ++ WNAMI+GL F E L R M G P+
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T+ + A LR++ G+++H Y +K + + SSL MY + G + +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M +N++ W +I +NG L + + M+++ R + +T +L C +L
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
G+++H + +K+G +SV V + LI+MY CG +A F D+ + W+++I AYG+
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 327 KEWYREAIDLFDLMMSN-GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASK 384
EAI+LF+ M N F +L C +G + FD+M Y +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H T +V LL R G LD+A+ + P
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMP 357
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 7/244 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL ++ + G + V P R++ AWN +I G A NG P L ++M G R
Sbjct: 130 SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR 189
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN IT + +L C+ L QG+++HA A+K V +VSSL+ MYSKCG +G + +
Sbjct: 190 PNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKA 249
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
F E ++ ++W++MI + +G +EA+ + +M + T + V +L C
Sbjct: 250 FSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGL 309
Query: 264 VKLGKEVHGQVL-KLGFAS--VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTA 319
G E+ ++ K GF HY ++++ G G D A+ + ++P K + W
Sbjct: 310 KDKGLELFDMMVEKYGFKPGLKHYTC--VVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKT 367
Query: 320 LIRA 323
L+ A
Sbjct: 368 LLSA 371
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 165/359 (45%), Gaps = 33/359 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI + G V+ +R +F+ R V WN+MISG N EAL M E R
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TR 315
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV------- 197
+ T+ ++ C L L+ GK++H +A K + + + S+L+ MYSKCG
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 198 ------------------------IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEAL 233
I + R+F+ +E K++I W +M + +NG E L
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
M D V+L+ ++ C + ++LG++V + +G S V++ LI++Y
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
CG ++ + VF + + W ++I Y EAIDLF M G P TF
Sbjct: 496 CKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFM 555
Query: 354 AVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
VL+ C+ G VE+ + F+ M + KEH + MV LL R G ++EA +E P
Sbjct: 556 VVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 155/378 (41%), Gaps = 66/378 (17%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K G + +AR++F P + V N+++ G NG+ EAL RL E + IT+
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEAL---RLFKELNFSADAITLTT 192
Query: 153 ILPICAKLRTLKQGKEVHA-------------------------------YALKRRFLPH 181
+L CA+L LK GK++HA Y L++ P
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 182 VTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
+S+L+ Y+ CG + S LFD + VILW +MI + N EAL + M+
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR- 311
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYG------- 294
R D+ TL ++ C L ++ GK++H K G VA+ L++MY
Sbjct: 312 NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 295 ------------------------ACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
+CG D+AK VF + +K ++W ++ +
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
E ++ F M + + +V+S C +E + F + +++ + + +
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSL 491
Query: 391 VQLLTRYGKLDEAQRFLE 408
+ L + G ++ +R +
Sbjct: 492 IDLYCKCGFVEHGRRVFD 509
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 129/256 (50%), Gaps = 5/256 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I+++F G +D A++VFE +S+ +WN+M +G + NG E LEY M +
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +++ ++ CA + +L+ G++V A A + SSL+ +Y KCG + + R+
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRV 507
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M K + + W +MI NG EA+ + + M + R +T +L C V
Sbjct: 508 FDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLV 567
Query: 265 KLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIR 322
+ G+++ + + GF + ++++ G + A + +P D W++++R
Sbjct: 568 EEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILR 627
Query: 323 ---AYGYKEWYREAID 335
A GYK ++A +
Sbjct: 628 GCVANGYKAMGKKAAE 643
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 43/259 (16%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+Q++ + G + +AR +F+E P R+ +WN MI G ++G +L + +M E R
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE---RDG 124
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+ +V+ ++K G + + RLF+
Sbjct: 125 YSWNVVVSG------------------------------------FAKAGELSVARRLFN 148
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M +K+V+ +++ + NG+ EAL + + + + AD +TLT +L C EL +K
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAELEALKC 205
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
GK++H Q+L G + + L+N+Y CG A + + + + +ALI Y
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 327 KEWYREAIDLFDLMMSNGC 345
E+ LFD SN C
Sbjct: 266 CGRVNESRGLFD-RKSNRC 283
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 253 RMLCVCGELRRVKLGKEVHGQVLKLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPD 311
R+L C R L ++ +G +LK GF +S+ VA L+ MY G A+ +F +PD
Sbjct: 31 RLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD 90
Query: 312 KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRF 371
+ +W +I Y ++ FD+M + +++ V+S +AG + A R
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRL 146
Query: 372 FDLMSTYEI 380
F+ M ++
Sbjct: 147 FNAMPEKDV 155
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 173/360 (48%), Gaps = 33/360 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGK 143
+ +I + K N++ AR+VF+E R V +WN+MISG + +G + + + ML
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+PN +T++ + C + L G EVH ++ +++ ++++ Y+KCG + Y+
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAV---MRSMQLTR----------------- 243
LFD M +K+ + + A+I + +G + EA+A+ M S+ L+
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 244 -----------QRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
R +TVTL+ +L +K GKE+H ++ G + YV +I+
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y G A+ VF D+ + WTA+I AY A LFD M G P+ T
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 353 EAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
AVLS +G + A FD M T Y+IE EH MV +L+R GKL +A F+ P
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 130/284 (45%), Gaps = 14/284 (4%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML---- 139
S LI + ++ A VF+E R+ ++NA++ +A +
Sbjct: 60 ASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSC 119
Query: 140 --EEGKRPNWITMMVILPI---CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK 194
+ RP+ I++ +L C ++VH + ++ F V + + ++ Y+K
Sbjct: 120 YSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTK 179
Query: 195 CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTR 253
C I + ++FD M +++V+ W +MI ++G + + ++M + + + VT+
Sbjct: 180 CDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVIS 239
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
+ CG+ + G EVH ++++ + +I Y CG D A+ +F + +K
Sbjct: 240 VFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
S+T+ A+I Y +EA+ LF M S G S T+ A++S
Sbjct: 300 SVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMIS 339
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 15/256 (5%)
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
++HA + P + S L+ Y++ ++ +FD + +N + A++ +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 228 FLNEALAVMRS------MQLTRQRADTVTLT---RMLCVCGELRRVKLGKEVHGQVLKLG 278
+A ++ S R D+++++ + L C + L ++VHG V++ G
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
F S +V +I Y C ++A+ VF + ++ ++W ++I Y + + ++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 339 LMMSNGCS---PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
M++ CS PN T +V C ++ + M I+ C ++
Sbjct: 223 AMLA--CSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 396 RYGKLDEAQR-FLEMS 410
+ G LD A+ F EMS
Sbjct: 281 KCGSLDYARALFDEMS 296
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 2/329 (0%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+SL ++ + G + +FE R V +W ++I G +A+E M
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T + CA L L G+++H L +++ +S+M MYS CG + +
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF GM +++I W+ +I + GF E M+ + + L +L V G +
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G++VH L G V + LINMY CG A ++FG ++ TA+I
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
Y +EAIDLF+ + G P++ TF +VL+ C +G ++ F +F++M TY +
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFL-EMS 410
+KEH MV LL R G+L +A++ + EMS
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ + G +D + +VF E P R+ W A+I+GL H G +E L Y M +
Sbjct: 147 SSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL 206
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T + L CA LR +K GK +H + + R F+ + + +SL MY++CG + + L
Sbjct: 207 SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCL 266
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M +++V+ WT++I + G +A+ M+ ++ + T M C L R+
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
G+++H VL LG V+ ++ MY CG +A ++F + + ++W+ +I Y
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+ E F M +G P F ++LS+ +E + L + +E +
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 385 EHCTFMVQLLTRYGKLDEA 403
+ ++ + ++ G + EA
Sbjct: 447 TVRSSLINMYSKCGSIKEA 465
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 2/279 (0%)
Query: 83 DPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM--LE 140
DP+S ++ GN+ ARQVF++ P + +W ++I EAL M ++
Sbjct: 42 DPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVD 101
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
P+ + V+L C + + G+ +HAYA+K L V + SSL+ MY + G I
Sbjct: 102 HAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK 161
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
S R+F M +N + WTA+I V G E L M + + +DT T L C
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
LR+VK GK +H V+ GF + VA L MY CG + +F + ++ ++WT+L
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
I AY +A++ F M ++ PN TF ++ S C
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI ++ K G++ A +F E+ R + + AMI+G A +G +EA++ L+ G R
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRR---FLPHVTMVSSLMVMYSKCGVIGYS 201
P+ +T + +L C L G H + + + P ++ + + G + +
Sbjct: 510 PDSVTFISVLTACTHSGQLDLG--FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567
Query: 202 IRLFDGME-KKNVILWTAMIDSCVENGFLNEA-LAVMRSMQLTRQRADT-VTLTRMLCVC 258
++ + M KK+ ++WT ++ +C G + A R ++L A VTL +
Sbjct: 568 EKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSST 627
Query: 259 GELRR---VKLGKEVHGQVLKLGFASV 282
G L V+ + G + + G++S+
Sbjct: 628 GNLEEAANVRKNMKAKGVIKEPGWSSI 654
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 165/323 (51%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL ++ K G +D A +VF+E P R+ AWNA++ G NG EA+ M ++G
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P +T+ L A + +++GK+ HA A+ + +SL+ Y K G+I Y+ +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +K+V+ W +I V+ G + +A+ + + M+L + + D VTL ++ +
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
KLGKEV ++ F S +A+ +++MY CG +AK VF + +K + W L+ AY
Sbjct: 392 KLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAY 451
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
EA+ LF M G PN T+ ++ R G V++A F M + I +
Sbjct: 452 AESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNL 511
Query: 385 EHCTFMVQLLTRYGKLDEAQRFL 407
T M+ + + G +EA FL
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFL 534
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 175/399 (43%), Gaps = 72/399 (18%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K G ++ A VF+ + V WN +ISG G +A+ +LM E +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI------ 198
+ +T+ ++ A+ LK GKEV Y ++ F + + S++M MY+KCG I
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 199 -------------------------GYSIRLFDGMEKK---------------------- 211
G ++RLF GM+ +
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 212 -----------------NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRM 254
N+I WT M++ V+NG EA+ +R MQ + R + ++T
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA 552
Query: 255 LCVCGELRRVKLGKEVHGQVLK-LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
L C L + +G+ +HG +++ L +S+ + L++MY CG + A+ VFG+
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF- 372
A+I AY +EAI L+ + G P+ T VLS C+ AG + A F
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 373 DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
D++S ++ EH MV LL G+ ++A R +E P
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 105 EESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLK 164
E++ S +++ +S L NG +EAL V M R IL C R L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 165 QGKEVHAYALKRR--FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
GK++HA LK + + + + L++ Y+KC + + LF + +NV W A+I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
G AL M D + + CG L+ + G+ VHG V+K G
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
+VA+ L +MYG CGV D+A VF +PD+ ++ W AL+ Y EAI LF M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDA 368
G P T LS G VE+
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEG 293
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 126/277 (45%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ + K +++A +F + R+V +W A+I G AL MLE
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ + + C L+ + G+ VH Y +K V + SSL MY KCGV+ + ++
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD + +N + W A++ V+NG EA+ + M+ VT++ L + V
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ GK+ H + G + + L+N Y G+ + A++VF + +K +TW +I Y
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
+ +AI + LM + T ++S R
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 174/329 (52%), Gaps = 12/329 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G++ + +VFE + + +WNA++SG NG +EAL M E
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHA-YALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ T+ ++ CA L+ L+QGK+VHA + R L V + ++++ YS G+I +++
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL--VVLGTAMISFYSSVGLINEAMK 240
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+++ + + ++ ++I C+ N EA +M +RQR + L+ L C +
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM-----SRQRPNVRVLSSSLAGCSDNS 295
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+ +GK++H L+ GF S + L++MYG CG A+ +F A+P K ++WT++I
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMID 355
Query: 323 AYGYKEWYREAIDLFDLMMSNGCS--PNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
AY +A+++F M G PN+ TF V+S C AG V++ F +M Y
Sbjct: 356 AYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYR 415
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ EH + +L++ G+ +E R +E
Sbjct: 416 LVPGTEHYVCFIDILSKAGETEEIWRLVE 444
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 13/299 (4%)
Query: 92 FKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMM 151
F R A +F+E P+R +S+ N+ +S +G P + L + + T
Sbjct: 29 FIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFT 88
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
+L C+ L + G++VHA +K+ ++L+ MYSK G + S+R+F+ +E+K
Sbjct: 89 PVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEK 148
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+++ W A++ + NG EAL V +M R TL+ ++ C L+ ++ GK+VH
Sbjct: 149 DLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVH 208
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIRAYGYKEWY 330
V+ G V + +I+ Y + G+ + A V+ ++ + +LI Y
Sbjct: 209 AMVVVTGRDLV-VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY 267
Query: 331 REAIDLFDLMMSN---------GCSPNT--FTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
+EA L N GCS N+ + + + + R GFV D+ LM Y
Sbjct: 268 KEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 167/328 (50%), Gaps = 4/328 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K +VD A +VF+E+ R++ +WN++++G HN EALE LM++E
Sbjct: 266 NSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVE 325
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +T++ +L +C K +H ++R + + +SSL+ Y+ C ++ + +
Sbjct: 326 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
D M K+V+ + MI G +EA+++ M R + +T+ +L C +
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADL 442
Query: 265 KLGKEVHGQVLKLGFA-SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ K HG ++ A + V +++ Y CG + A+ F + +K ++WT +I A
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISA 502
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
Y +A+ LFD M G +PN T+ A LS C+ G V+ F M + + S
Sbjct: 503 YAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPS 562
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H + +V +L+R G++D A ++ P
Sbjct: 563 LQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 5/262 (1%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK-RPNWITMMVILPICA 158
AR++F+E R V +W+ +I + P L+ + M+ E K P+ +T+ +L C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 159 KLRTLKQGKEVHAYALKRRF-LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT 217
+ + G+ VH ++++R F L V + +SL+ MYSK + + R+FD +N++ W
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
+++ V N +EAL + M D VT+ +L VC + K +HG +++
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G+ S + LI+ Y +C + D+A V ++ K ++ + +I + EAI +F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 338 DLMMSNGCSPNTFTFEAVLSIC 359
M +PN T ++L+ C
Sbjct: 418 CHMRD---TPNAITVISLLNAC 436
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 163/357 (45%), Gaps = 46/357 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+ + K G++ + F+ R +WN ++ GL GF E L + + G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+++++ C L G+++H Y ++ F ++ +S++ MY+ + + +L
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
FD M +++VI W+ +I S V++ L + + M + D VT+T +L C +
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 264 VKLGKEVHGQVLKLGF--ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ +G+ VHG ++ GF A V +V LI+MY D+A VF + ++W +++
Sbjct: 242 IDVGRSVHGFSIRRGFDLADV-FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSIL 300
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICD----------------RAGF- 364
+ + + Y EA+++F LM+ + T ++L +C R G+
Sbjct: 301 AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYE 360
Query: 365 ------------------VEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
V+DA D M+ ++ + C+ M+ L G+ DEA
Sbjct: 361 SNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS----CSTMISGLAHAGRSDEA 413
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 23/209 (11%)
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
++ CAKL L QG + + Y KCG + +R FD M +
Sbjct: 50 IVFKACAKLSWLFQGNSIADF-------------------YMKCGDLCSGLREFDCMNSR 90
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+ + W ++ ++ GF E L +++ +T TL ++ C L G+++H
Sbjct: 91 DSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIH 148
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G V++ GF + V ++ MY +A+ +F + ++ ++W+ +IR+Y +
Sbjct: 149 GYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPV 207
Query: 332 EAIDLFDLMMSNG-CSPNTFTFEAVLSIC 359
+ LF M+ P+ T +VL C
Sbjct: 208 VGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 162/316 (51%), Gaps = 4/316 (1%)
Query: 100 ARQVFEESPRR-SVSAWNAMISGLAHNGFPREALEYVRLMLEEG-KRPNWITMMVILPIC 157
A +VF + + +V WN +I G A G A R M G P+ T ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 158 AKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT 217
+ ++ G+ +H+ ++ F + + +SL+ +Y+ CG + + ++FD M +K+++ W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
++I+ ENG EALA+ M + D T+ +L C ++ + LGK VH ++K+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G + + L+++Y CG + AK +F + DK S++WT+LI + +EAI+LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 338 DLMMSN-GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLT 395
M S G P TF +L C G V++ F +F M Y+IE EH MV LL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 396 RYGKLDEAQRFLEMSP 411
R G++ +A +++ P
Sbjct: 372 RAGQVKKAYEYIKSMP 387
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ L+ G+V A +VF++ P + + AWN++I+G A NG P EAL M +G +
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 219
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T++ +L CAK+ L GK VH Y +K ++ + L+ +Y++CG + + L
Sbjct: 220 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 279
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRAD-TVTLTRMLCVCGELRR 263
FD M KN + WT++I NGF EA+ + + M+ T +T +L C
Sbjct: 280 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 339
Query: 264 VKLGKE 269
VK G E
Sbjct: 340 VKEGFE 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRP 145
L+ L+ + G V+ A+ +F+E ++ +W ++I GLA NGF +EA+E + M EG P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
IT + IL C+ +K+G E + + P + ++ + ++ G + +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 205 FDGME-KKNVILWTAMIDSCVENGFLNEA-LAVMRSMQL-TRQRADTVTLTRM 254
M + NV++W ++ +C +G + A A ++ +QL D V L+ M
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 152/321 (47%), Gaps = 14/321 (4%)
Query: 89 QLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
++ F+R N DL AWNAM++G + + L+ LM ++G+R +
Sbjct: 472 EILFERHNFDLV-------------AWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T+ + C L + QGK+VHAYA+K + + + S ++ MY KCG + + FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
+ + WT MI C+ENG A V M+L D T+ + L ++ G+
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
++H LKL + +V L++MY CG D+A +F + W A++
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHC 387
+E + LF M S G P+ TF VLS C +G V +A++ M Y I+ EH
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 388 TFMVQLLTRYGKLDEAQRFLE 408
+ + L R G + +A+ +E
Sbjct: 759 SCLADALGRAGLVKQAENLIE 779
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 6/270 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K AR VF+ R + +WN++I+G+A NG EA+ +L G +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 145 PNWITMMVILPICAKL-RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ TM +L + L L K+VH +A+K + + ++L+ YS+ + +
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 204 LFDGMEKKN--VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
LF E+ N ++ W AM+ ++ ++ L + M +R+D TL + CG L
Sbjct: 474 LF---ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ GK+VH +K G+ +V++ +++MY CG A+ F ++P + WT +I
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFT 351
A +F M G P+ FT
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 166 GKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI----- 220
GK HA L P ++++L+ MYSKCG + Y+ R+FD M ++++ W +++
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 221 --DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
+ VEN + +A + R ++ +TL+ ML +C V + HG K+G
Sbjct: 118 SSECVVEN--IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY---GYKEWYREAID 335
+VA L+N+Y G K++F +P + + W +++AY G+KE EAID
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE---EAID 232
Query: 336 LFDLMMSNGCSPNTFTFEAVLSI 358
L S+G +PN T + I
Sbjct: 233 LSSAFHSSGLNPNEITLRLLARI 255
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 116 NAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALK 175
N +S H+G L+ M+E + +T +++L K+ +L G++VH ALK
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 176 RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
+T+ +SL+ MY K G++ +FD M ++++I W ++I +NG EA+ +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 236 MRSMQLTR--QRADTVTLTRMLCVCGEL-RRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
MQL R + D T+T +L L + L K+VH +K+ S +V+ LI+
Sbjct: 404 F--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y A+++F + + W A++ Y + + LF LM G + FT
Sbjct: 462 YSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 353 EAVLSIC 359
V C
Sbjct: 521 ATVFKTC 527
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S ++ ++ K G++ A+ F+ P AW MISG NG A M G
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ + + L L+QG+++HA ALK + +SL+ MY+KCG I + L
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
F +E N+ W AM+ ++G E L + + M+ + D VT +L C
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 32/271 (11%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+L+ ++ K G V + +FEE P R V WN M+ GF EA++ G P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N IT+ ++ I G + A +K + S ++ +K G S L
Sbjct: 245 NEITLRLLARI--------SGDDSDAGQVKSFANGNDASSVSEIIFRNK----GLSEYLH 292
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
G + + M++S VE D VT ML ++ +
Sbjct: 293 SGQYSALLKCFADMVESDVE--------------------CDQVTFILMLATAVKVDSLA 332
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
LG++VH LKLG + V+ LINMY F A+ VF + ++ ++W ++I
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
EA+ LF ++ G P+ +T +VL
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNG-----FPREALEYVRLML 139
++LI ++ K G++ AR+VF++ P R + +WN++++ A + ++A R++
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
++ + +T+ +L +C + + H YA K + +L+ +Y K G +
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVK 197
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
LF+ M ++V+LW M+ + +E GF EA+ + + + + +TL + + G
Sbjct: 198 EGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISG 257
Query: 260 E 260
+
Sbjct: 258 D 258
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 39/227 (17%)
Query: 82 NDP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
NDP +SL+ ++ K G++D A +F+ +++AWNAM+ GLA +G +E L+ + M
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 139 LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
G +P+ +T + +L C+ G AY R M+ G+
Sbjct: 711 KSLGIKPDKVTFIGVLSACS-----HSGLVSEAYKHMRS-------------MHGDYGI- 751
Query: 199 GYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
K + ++ + D+ G + +A ++ SM + A +L C
Sbjct: 752 -----------KPEIEHYSCLADALGRAGLVKQAENLIESMSM---EASASMYRTLLAAC 797
Query: 259 GELRRVKLGKEVHGQVLKLG-FASVHYVAAELINMYGACGVFDNAKL 304
+ GK V ++L+L S YV L NMY A +D KL
Sbjct: 798 RVQGDTETGKRVATKLLELEPLDSSAYVL--LSNMYAAASKWDEMKL 842
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 164/331 (49%), Gaps = 8/331 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K G + AR+VFE R + WNA++S NG EA ++LM + R
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR 240
Query: 145 --PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
++ T +L C ++QGK++HA K + + + ++L+ MY+K + +
Sbjct: 241 FRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAR 296
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
F+ M +NV+ W AMI +NG EA+ + M L + D +T +L C +
Sbjct: 297 ECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFS 356
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+ K+V V K G A VA LI+ Y G A L F ++ + ++WT++I
Sbjct: 357 AIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIG 416
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIE 381
A + E++ +F+ M+ P+ TF VLS C G V++ R F M+ Y+IE
Sbjct: 417 ALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
A EH T ++ LL R G +DEA L P+
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMPT 506
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 21/289 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGL----------AHNGFPREALEY 134
+ L+Q + K D A ++F+E P R++ WN +I G+ AH GF Y
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFC-----Y 129
Query: 135 VRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK 194
+ +L + ++ M ++ +C +K G ++H +K+ +SL+ Y K
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 195 CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM--QLTRQRADTVTLT 252
CG+I + R+F+ + ++++LW A++ S V NG ++EA +++ M R R D T +
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFS 249
Query: 253 RMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+L C R++ GK++H + K+ + VA L+NMY +A+ F ++ +
Sbjct: 250 SLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
++W A+I + REA+ LF M+ P+ TF +VLS C +
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAK 354
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 6/233 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K ++ AR+ FE R+V +WNAMI G A NG REA+ ML E +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T +L CAK + + K+V A K+ +++ +SL+ YS+ G + ++
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + + +++ WT++I + +GF E+L + SM L + + D +T +L C V
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLV 458
Query: 265 KLGKEVHGQV---LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS 314
+ G ++ K+ HY LI++ G G D A V ++P + S
Sbjct: 459 QEGLRCFKRMTEFYKIEAEDEHYTC--LIDLLGRAGFIDEASDVLNSMPTEPS 509
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 156 ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
+ A L L K+ H + +K+ + + + L+ Y+K + +LFD M +N++
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 216 WTAMIDSCVE-NGFLNE----ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
W +I ++ +G N + + T D V+ ++ +C + +K G ++
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
H ++K G S + + L++ YG CG+ A+ VF AV D+ + W AL+ +Y
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 331 REAIDLFDLMMS--NGCSPNTFTFEAVLSIC 359
EA L LM S N + FTF ++LS C
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 165/360 (45%), Gaps = 33/360 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K +D+A+++F+E ++ NAM S G REAL LM++ G R
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ I+M+ + C++LR + GK H Y L+ F + ++L+ MY KC + R+
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 205 FDGMEKKNVILWTAMIDSCVENG-------------------------------FLNEAL 233
FD M K V+ W +++ VENG EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 234 AVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
V SMQ AD VT+ + CG L + L K ++ + K G + L++M
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
+ CG ++A +F ++ ++ WTA I A AI+LFD M+ G P+ F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 353 EAVLSICDRAGFVEDAFR-FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
L+ C G V+ F+ ++ + + H MV LL R G L+EA + +E P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
+SL+ + + G +D AR+VF+E R+V +W +MI G A F ++A++ + R++ +E
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +TM+ ++ CAKL L+ G++V+A+ + MVS+L+ MY KC I + R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LFD N+ L AM + V G EAL V M + R D +++ + C +LR
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ GK HG VL+ GF S + LI+MY C D A +F + +K +TW +++
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
Y A + F+ M N ++ ++S + E+A F M + E
Sbjct: 413 YVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 82 NDPSSLIQLHFK------RGNVDLARQVFEESPRRSVS-AWNAMISGLAHNGFPREALEY 134
ND S++ +L + R ++ A++VFE S +N++I G A +G EA+
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 135 VRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK 194
M+ G P+ T L CAK R G ++H +K + + + +SL+ Y++
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 195 CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV-MRSMQLTRQRADTVTLTR 253
CG + + ++FD M ++NV+ WT+MI F +A+ + R ++ ++VT+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++ C +L ++ G++V+ + G + + L++MY C D AK +F
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
A+ Y + REA+ +F+LMM +G P+ + + +S C +
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
+S++ + + G VD A + FE P +++ +WN +ISGL EA+E + + +EG
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +TMM I C L L K ++ Y K V + ++L+ M+S+CG ++
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F+ + ++V WTA I + G A+ + M + D V L C
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 264 VKLGKEVHGQVLKLGFAS---VHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
V+ GKE+ +LKL S VHY ++++ G G+ + A + +P + + W +
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGC--MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 320 LIRA 323
L+ A
Sbjct: 645 LLAA 648
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV---IGYSIRLFDGMEK-KNVILW 216
+T+ + K H K+ V+ ++ L+ + G + ++ +F+ E ++
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMY 102
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
++I +G NEA+ + M + D T L C + R G ++HG ++K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
+G+A +V L++ Y CG D+A+ VF + ++ ++WT++I Y +++ ++A+DL
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 337 FDLMMSN-GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
F M+ + +PN+ T V+S C + +E + + + IE + + +V +
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 396 RYGKLDEAQRFLE 408
+ +D A+R +
Sbjct: 283 KCNAIDVAKRLFD 295
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 165/360 (45%), Gaps = 33/360 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K +D+A+++F+E ++ NAM S G REAL LM++ G R
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ I+M+ + C++LR + GK H Y L+ F + ++L+ MY KC + R+
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 205 FDGMEKKNVILWTAMIDSCVENG-------------------------------FLNEAL 233
FD M K V+ W +++ VENG EA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 234 AVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINM 292
V SMQ AD VT+ + CG L + L K ++ + K G + L++M
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
+ CG ++A +F ++ ++ WTA I A AI+LFD M+ G P+ F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 353 EAVLSICDRAGFVEDAFR-FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
L+ C G V+ F+ ++ + + H MV LL R G L+EA + +E P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
+SL+ + + G +D AR+VF+E R+V +W +MI G A F ++A++ + R++ +E
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +TM+ ++ CAKL L+ G++V+A+ + MVS+L+ MY KC I + R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LFD N+ L AM + V G EAL V M + R D +++ + C +LR
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ GK HG VL+ GF S + LI+MY C D A +F + +K +TW +++
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
Y A + F+ M N ++ ++S + E+A F M + E
Sbjct: 413 YVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 82 NDPSSLIQLHFK------RGNVDLARQVFEESPRRSVS-AWNAMISGLAHNGFPREALEY 134
ND S++ +L + R ++ A++VFE S +N++I G A +G EA+
Sbjct: 62 NDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILL 121
Query: 135 VRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK 194
M+ G P+ T L CAK R G ++H +K + + + +SL+ Y++
Sbjct: 122 FLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAE 181
Query: 195 CGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV-MRSMQLTRQRADTVTLTR 253
CG + + ++FD M ++NV+ WT+MI F +A+ + R ++ ++VT+
Sbjct: 182 CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVC 241
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++ C +L ++ G++V+ + G + + L++MY C D AK +F
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
A+ Y + REA+ +F+LMM +G P+ + + +S C +
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
+S++ + + G VD A + FE P +++ +WN +ISGL EA+E + + +EG
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +TMM I C L L K ++ Y K V + ++L+ M+S+CG ++
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F+ + ++V WTA I + G A+ + M + D V L C
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 264 VKLGKEVHGQVLKLGFAS---VHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
V+ GKE+ +LKL S VHY ++++ G G+ + A + +P + + W +
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGC--MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 320 LIRA 323
L+ A
Sbjct: 645 LLAA 648
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV---IGYSIRLFDGMEK-KNVILW 216
+T+ + K H K+ V+ ++ L+ + G + ++ +F+ E ++
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMY 102
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
++I +G NEA+ + M + D T L C + R G ++HG ++K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
+G+A +V L++ Y CG D+A+ VF + ++ ++WT++I Y +++ ++A+DL
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 337 FDLMMSN-GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
F M+ + +PN+ T V+S C + +E + + + IE + + +V +
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 396 RYGKLDEAQRFLE 408
+ +D A+R +
Sbjct: 283 KCNAIDVAKRLFD 295
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 160/329 (48%), Gaps = 40/329 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G + AR VF+ +++ AWN+++SGL++ ++A + M +EG +
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IT +SL Y+ G ++ +
Sbjct: 324 PDAITW-----------------------------------NSLASGYATLGKPEKALDV 348
Query: 205 FDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
M++K NV+ WTA+ C +NG AL V MQ + T++ +L + G
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC 408
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
L + GKEVHG L+ YVA L++MYG G +A +F + +K +W +
Sbjct: 409 LSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCM 468
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
+ Y E I F +M+ G P+ TF +VLS+C +G V++ +++FDLM S Y
Sbjct: 469 LMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYG 528
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
I + EHC+ MV LL R G LDEA F++
Sbjct: 529 IIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 153/347 (44%), Gaps = 70/347 (20%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILP 155
++ A ++F+E P+R AWN ++ +G +A+E R M G + TM+ +L
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 156 ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
+C+ +G+++H Y L+ +V+M +SL+VMYS+ G + S ++F+ M+ +N+
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 216 WTAMIDSCVENGFLN-----------------------------------EALAVMRSMQ 240
W +++ S + G+++ +A+AV++ MQ
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 241 LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFD 300
+ + T +++ +L E +KLGK +HG +L+ YV LI+MY G
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 301 NAKLVFGAVPDKGSMTWTALIRAYGY---------------KEWYR-------------- 331
A++VF + K + W +L+ Y KE +
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 332 ------EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
+A+D+ M G +PN ++ A+ S C + G +A + F
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 166 GKEVHAYALKRRFLPHVT-MVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCV 224
G +H +KR T +VS+ M Y +C +G++ +LFD M K++ + W ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
+G +A+ + R MQ + +A T+ ++L VC G+++HG VL+LG S
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG 344
+ LI MY G + ++ VF ++ D+ +W +++ +Y + +AI L D M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 345 CSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKL 400
P+ T+ ++LS G +DA M ++ S + ++Q + G L
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G++ A ++F +S+++WN M+ G A G E + +MLE G
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ IT +L +C +++G + R +P + S ++ + + G + +
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 204 LFDGME-KKNVILWTAMIDSC 223
M K + +W A + SC
Sbjct: 555 FIQTMSLKPDATIWGAFLSSC 575
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 164/331 (49%), Gaps = 4/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML--EEG 142
+ ++ ++ K + AR+VF+ +++ W+AMI G N +EA E ML +
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ + +IL CA+ L G+ VH YA+K F+ +T+ ++++ Y+K G + +
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
R F + K+VI + ++I CV N E+ + M+ + R D TL +L C L
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLA 423
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+ G HG + G+A + L++MY CG D AK VF + + ++W ++
Sbjct: 424 ALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLF 483
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS--TYEI 380
+G +EA+ LF+ M G +P+ T A+LS C +G V++ + F+ MS + +
Sbjct: 484 GFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNV 543
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H M LL R G LDEA F+ P
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMP 574
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 3/261 (1%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVS--AWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+L +L+ V+LAR VF+E P ++ AW+ MI A N F +AL+ ML G
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RP T +L CA LR + GK +H++ F + + ++L+ Y+KCG + +I+
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELR 262
+FD M K++++ W AMI + L + + + M ++ + T+ M G
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++ GK VHG ++GF++ V ++++Y A+ VF K +TW+A+I
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 323 AYGYKEWYREAIDLFDLMMSN 343
Y E +EA ++F M+ N
Sbjct: 280 GYVENEMIKEAGEVFFQMLVN 300
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 3/327 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLA-HNGFPREALEYVRLMLEEGK 143
++L+ + K G +++A +VF+E P+R + AWNAMISG + H ++ + +G
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T++ + P + L++GK VH Y + F + + + ++ +Y+K I Y+ R
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA--DTVTLTRMLCVCGEL 261
+FD KKN + W+AMI VEN + EA V M + A V + +L C
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF 321
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ G+ VH +K GF V +I+ Y G +A F + K +++ +LI
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
E+ LF M ++G P+ T VL+ C + +
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYA 441
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ C ++ + T+ GKLD A+R +
Sbjct: 442 VNTSICNALMDMYTKCGKLDVAKRVFD 468
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFA-SVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+L C R + LG+ +H +LK S V L +Y +C + A+ VF +P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 313 --GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
+ W +IRAY ++ +A+DL+ M+++G P +T+ VL C ++D
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 371 FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
++ + CT +V + G+L+ A + + P
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 6/322 (1%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K ++ A Q+F++ P+R+V +W MIS + ++ALE + LML + RPN
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T +L C + ++ +H +K V + S+L+ +++K G ++ +FD
Sbjct: 162 VYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M + I+W ++I +N + AL + + M+ A+ TLT +L C L ++L
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
G + H ++K + + L++MY CG ++A VF + ++ +TW+ +I
Sbjct: 279 GMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ 336
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKE 385
+ +EA+ LF+ M S+G PN T VL C AG +ED + +F M Y I+ +E
Sbjct: 337 NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE 396
Query: 386 HCTFMVQLLTRYGKLDEAQRFL 407
H M+ LL + GKLD+A + L
Sbjct: 397 HYGCMIDLLGKAGKLDDAVKLL 418
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 4/241 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI + K G + A VF+E WN++I G A N ALE + M G
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
T+ +L C L L+ G + H + +K + + + ++L+ MY KCG + ++R+
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRV 315
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ M++++VI W+ MI +NG+ EAL + M+ + + + +T+ +L C +
Sbjct: 316 FNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 265 KLGKEVHGQVLKL-GFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTALIR 322
+ G + KL G V +I++ G G D+A KL+ + ++TW L+
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 323 A 323
A
Sbjct: 436 A 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G+++ A +VF + R V W+ MISGLA NG+ +EAL+ M G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN+IT++ +L C+ L+ G + ++K+ + P ++ + K G + ++
Sbjct: 357 PNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 415
Query: 203 RLFDGME-KKNVILWTAMIDSC-VENGFLNEALAVMRSMQLTRQRADTVTL 251
+L + ME + + + W ++ +C V+ + A + + L + A T TL
Sbjct: 416 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)
Query: 153 ILPICAKLRTLKQGKEV--HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
++ C R + +G + H Y R P + +V+ L+ MY K ++ + +LFD M +
Sbjct: 67 LIKCCISNRAVHEGNLICRHLYFNGHR--PMMFLVNVLINMYVKFNLLNDAHQLFDQMPQ 124
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
+NVI WT MI + + +AL ++ M R + T + +L C + V++ +
Sbjct: 125 RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---L 181
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
H ++K G S +V + LI+++ G ++A VF + ++ W ++I +
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
A++LF M G T +VL C +E + + Y+ + + +
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNA--L 299
Query: 391 VQLLTRYGKLDEAQR 405
V + + G L++A R
Sbjct: 300 VDMYCKCGSLEDALR 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%)
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
L A+ M S+Q AD+ T + ++ C R V G + + G + ++
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
LINMY + ++A +F +P + ++WT +I AY + +++A++L LM+ + PN
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 349 TFTFEAVLSICD 360
+T+ +VL C+
Sbjct: 162 VYTYSSVLRSCN 173
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 35/326 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ + + G + A + F+ + V +W A+IS + G +A+ ML
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+ IL C++ + L+ G++VH+ +KR V + +SLM MY+KCG I ++
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FDGM +N + WT++I + GF EA+++ R M+ A+ +T+ +L CG + +
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LGKE+H Q++K Y+ + L+ +Y CG +A V +P + ++WTA+I
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC------------------------- 359
EA+D M+ G PN FT+ + L C
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNV 521
Query: 360 ----------DRAGFVEDAFRFFDLM 375
+ GFV +AFR FD M
Sbjct: 522 FVGSALIHMYAKCGFVSEAFRVFDSM 547
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 135/275 (49%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G + R+VF+ R+ W ++I+ A GF EA+ R+M
Sbjct: 323 TSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI 382
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +T++ IL C + L GKE+HA +K +V + S+L+ +Y KCG + +
Sbjct: 383 ANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV 442
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ ++V+ WTAMI C G +EAL ++ M + T + L C +
Sbjct: 443 LQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESL 502
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+G+ +H K S +V + LI+MY CG A VF ++P+K ++W A+I Y
Sbjct: 503 LIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGY 562
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ REA+ L M + G + + F +LS C
Sbjct: 563 ARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 163/329 (49%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + G++ AR+VF+ P ++ W AMI G G EA ++ G R
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 145 -PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
N + +L +C++ + G++VH +K + ++ + SSL+ Y++CG + ++R
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALR 239
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
FD ME+K+VI WTA+I +C G +A+ + M + T+ +L C E +
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G++VH V+K + +V L++MY CG + + VF + ++ ++TWT++I A
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAA 359
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
+ + + EAI LF +M N T ++L C G + + IE +
Sbjct: 360 HAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKN 419
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+ +V L + G+ +A L+ PS
Sbjct: 420 VYIGSTLVWLYCKCGESRDAFNVLQQLPS 448
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ L+ K G A V ++ P R V +W AMISG + G EAL++++ M++EG
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T L CA +L G+ +H+ A K L +V + S+L+ MY+KCG + + R+
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
FD M +KN++ W AMI NGF EAL +M M+ D +L CG++
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 182/336 (54%), Gaps = 14/336 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVR-LMLEEGK 143
S+LI ++ G ++ AR+VF+E P+R++ +W +MI G NG +A+ + L+++E
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 144 RPNWI-----TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
+ + ++ ++ C+++ + +H++ +KR F V++ ++L+ Y+K G
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 199 GYSI--RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA---DTVTLTR 253
G ++ ++FD + K+ + + +++ ++G NEA V R +L + + + +TL+
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR--RLVKNKVVTFNAITLST 292
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
+L +++GK +H QV+++G V +I+MY CG + A+ F + +K
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
+WTA+I YG +A++LF M+ +G PN TF +VL+ C AG + +R+F+
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 374 LM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
M + +E EH MV LL R G L +A ++
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 9/309 (2%)
Query: 109 RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKE 168
+ V +WN++I+ LA +G EAL M + P + + C+ L + GK+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
H A + + + S+L+VMYS CG + + ++FD + K+N++ WT+MI NG
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 229 LNEALAVMRSMQLTRQRA------DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
+A+++ + + + D++ L ++ C + L + +H V+K GF
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 283 HYVAAELINMY--GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
V L++ Y G G A+ +F + DK +++ +++ Y EA ++F +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 341 MSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
+ N + N T VL +G + D + +E T ++ + + G+
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 400 LDEAQRFLE 408
++ A++ +
Sbjct: 338 VETARKAFD 346
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Query: 208 MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
++K +V W ++I +G EAL SM+ + + C L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K+ H Q G+ S +V++ LI MY CG ++A+ VF +P + ++WT++IR Y
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 328 EWYREAIDLF-DLMMSNGCSPNTFTFE-----AVLSICDR 361
+A+ LF DL++ + + +V+S C R
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 152/316 (48%), Gaps = 3/316 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR+V +E P ++V +W AMIS + G EAL M+ +PN T +L C +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
L GK++H +K + H+ + SSL+ MY+K G I + +F+ + +++V+ TA+
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
I + G EAL + + + VT +L L + GK+ H VL+
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL 285
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
+ LI+MY CG A+ +F +P++ +++W A++ Y RE ++LF L
Sbjct: 286 PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRL 345
Query: 340 MMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFFDLM--STYEIEASKEHCTFMVQLLTR 396
M P+ T AVLS C + FD M Y + EH +V +L R
Sbjct: 346 MRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGR 405
Query: 397 YGKLDEAQRFLEMSPS 412
G++DEA F++ PS
Sbjct: 406 AGRIDEAFEFIKRMPS 421
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 3/259 (1%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
L + F SP V IS L NG +EAL + ++ G + +L C
Sbjct: 7 LIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAML---GPEMGFHGYDALLNACL 63
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
R L+ G+ VHA+ +K R+LP + + L++ Y KC + + ++ D M +KNV+ WTA
Sbjct: 64 DKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
MI + G +EAL V M + + + T +L C + LGK++HG ++K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
+ S +V + L++MY G A+ +F +P++ ++ TA+I Y EA+++F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 339 LMMSNGCSPNTFTFEAVLS 357
+ S G SPN T+ ++L+
Sbjct: 244 RLHSEGMSPNYVTYASLLT 262
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ ++ K G + AR++FE P R V + A+I+G A G EALE + EG
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN++T +L + L L GK+ H + L+R + + +SL+ MYSKCG + Y+ RL
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGELRR 263
FD M ++ I W AM+ ++G E L + R M+ R + D VTL +L C R
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 264 VKLGKEVHGQVLKLGFASV----HYVAAELINMYGACGVFDNAKLVFGAVPDK 312
G + ++ + + HY +++M G G D A +P K
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGC--IVDMLGRAGRIDEAFEFIKRMPSK 422
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 2/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ ++ ++ K G + A++VF++ + A ++ G G R+AL+ ++ EG
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ V+L CA L L GK++HA K V++ + L+ Y KC + R
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA-DTVTLTRMLCVCGELRR 263
F + + N + W+A+I + EA+ +S++ ++ T T + C L
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+G +VH +K Y + LI MY CG D+A VF ++ + + WTA I
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
+ Y EA+ LF+ M+S G PN+ TF AVL+ C AG VE D M Y +
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ +H M+ + R G LDEA +F++ P
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 15/330 (4%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++Q++ + +++ A ++F+E + + MIS A G +A+ ML G +P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+L R L G+++HA+ ++ + ++ + ++ MY KCG + + R+FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
M K + T ++ + G +AL + + D+ + +L C L + L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
GK++H V KLG S V L++ Y C F++A F + + ++W+A+I Y
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 327 KEWYREAIDLFDLMMSNGCSP-NTFTFE------AVLSICDRAGFVE-DAFRFFDLMSTY 378
+ EA+ F + S S N+FT+ +VL+ C+ G V DA + + S Y
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
A ++ + ++ G LD+A E
Sbjct: 424 GESA-------LITMYSKCGCLDDANEVFE 446
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%)
Query: 130 EALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLM 189
EA E+++ M + G + + + C +LR+L G+ +H P V + + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 190 VMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTV 249
MY +C + + +LFD M + N + T MI + E G L++A+ + M + + +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
T +L R + G+++H V++ G S + ++NMY CG AK VF +
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
K + T L+ Y R+A+ LF +++ G ++F F VL C
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKAC 295
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 164/301 (54%), Gaps = 2/301 (0%)
Query: 110 RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEV 169
+ + +W +I+G A N EALE R + ++ + + + IL + L+++ KE+
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFL 229
H + L++ L V + + L+ +Y KC +GY+ R+F+ ++ K+V+ WT+MI S NG
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
+EA+ + R M T AD+V L +L L + G+E+H +L+ GF +A +
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNT 349
++MY CG +AK VF + KG + +T++I AYG + A++LFD M SP+
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+F A+L C AG +++ F +M YE+E EH +V +L R + EA F++
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVK 748
Query: 409 M 409
M
Sbjct: 749 M 749
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 143/280 (51%), Gaps = 8/280 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ ++ K G++D A +VF+E P R+ AWN MI NG P AL M EG
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+ +L CAKLR ++ G E+H+ +K + +V++L+ MY+K + + RLFD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 207 GM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
G EK + +LW +++ S +G E L + R M +T ++ T+ L C K
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 266 LGKEVHGQVLKLGFASVH----YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
LGKE+H VLK +S H YV LI MY CG A+ + + + +TW +LI
Sbjct: 302 LGKEIHASVLK---SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
+ Y Y+EA++ F M++ G + + ++++ R
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 135/268 (50%), Gaps = 1/268 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ + G + A ++ + V WN++I G N +EALE+ M+ G +
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ ++M I+ +L L G E+HAY +K + ++ + ++L+ MYSKC + Y R
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M K++I WT +I +N EAL + R + R D + L +L L+ +
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ KE+H +L+ G + EL+++YG C A VF ++ K ++WT++I +
Sbjct: 504 LIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTF 352
EA++LF M+ G S ++
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVAL 590
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 125 NGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTM 184
+G EA + RL + E P +L +C K R + QG+++H+ K P +
Sbjct: 61 DGVLTEAFQ--RLDVSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKT--FPSFEL 115
Query: 185 ---VSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
L+ MY KCG + + ++FD M + W MI + V NG ALA+ +M++
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN 301
+ +L C +LR ++ G E+H ++KLG+ S ++ L++MY
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 302 AKLVFGAVPDKG-SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICD 360
A+ +F +KG ++ W +++ +Y E ++LF M G +PN++T + L+ CD
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 361 RAGFVEDAFRFFDLMSTYEIEASKEH-CTFMVQLLTRYGKLDEAQRFL 407
+ + + +S+ + C ++ + TR GK+ +A+R L
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL 343
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 156/330 (47%), Gaps = 6/330 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + G A +VF E P R V +W +I+G G +EAL+ M E
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE--- 201
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T + +L ++ L GK +H LKR L + ++L+ MY KC + ++R+
Sbjct: 202 PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRV 261
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRR 263
F +EKK+ + W +MI V EA+ + MQ + + D LT +L C L
Sbjct: 262 FGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGA 321
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
V G+ VH +L G ++ +++MY CG + A +F + K TW AL+
Sbjct: 322 VDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGG 381
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST--YEIE 381
E++ F+ M+ G PN TF A L+ C G V++ R+F M + Y +
Sbjct: 382 LAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLF 441
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH M+ LL R G LDEA ++ P
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 130/291 (44%), Gaps = 4/291 (1%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
++N ++S A PR + + + G P+ T + C K +++GK++H
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEAL 233
K F + + +SL+ Y CG + ++F M ++V+ WT +I G EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
M + A V + L G + + LGK +HG +LK LI+MY
Sbjct: 193 DTFSKMDVEPNLATYVCV---LVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM-SNGCSPNTFTF 352
C +A VFG + K ++W ++I + E +EAIDLF LM S+G P+
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 353 EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
+VLS C G V+ + + T I+ T +V + + G ++ A
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 6/332 (1%)
Query: 86 SLIQLHFK---RGNVDLARQVFEESPRRSVSAWNAMISGLAHN-GFPREALEYVRLMLEE 141
SL+ ++ K G+VD R+VF+ SV +W A+I+G N EA+ M+ +
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 142 GK-RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G PN T C L + GK+V A KR + ++ +S++ M+ K +
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ R F+ + +KN++ + +D N +A ++ + T +L
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
+ ++ G+++H QV+KLG + V LI+MY CG D A VF + ++ ++WT++
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
I + + ++ F+ M+ G PN T+ A+LS C G V + +R F+ M ++
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
I+ EH MV LL R G L +A F+ P
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 139/285 (48%), Gaps = 12/285 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPR---RSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
+SLI L+ K G+ A VFE R R V +W+AM++ +NG +A++ LE
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKC-GVIG 199
G PN ++ C+ + G+ + +K F V + SL+ M+ K
Sbjct: 161 GLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFE 220
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ ++FD M + NV+ WT MI C++ GF EA+ M L+ +D TL+ + C
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC---GVFDNAKLVFGAVPDKGSMT 316
EL + LGK++H ++ G V V L++MY C G D+ + VF + D M+
Sbjct: 281 ELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 317 WTALIRAYGYK-EWYREAIDLFDLMMSNG-CSPNTFTFEAVLSIC 359
WTALI Y EAI+LF M++ G PN FTF + C
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 126 GFPREALEYVRLMLEEGKRP-NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTM 184
G R A+ + LM +G RP + +T +L C + R + GK VHA ++ P +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 185 VSSLMVMYSKCGVIGYSIRLFDGME---KKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
+SL+ +YSK G + +F+ M K++V+ W+AM+ NG +A+ V
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG-FASVHYVAAELINMY-GACGVF 299
+ T ++ C V +G+ G ++K G F S V LI+M+ F
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 300 DNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+NA VF + + +TWT +I + REAI F M+ +G + FT +V S C
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I + K ++ A++ FE +++ ++N + G N +A + + + E
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T +L A + ++++G+++H+ +K + + ++L+ MYSKCG I + R+
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ ME +NVI WT+MI ++GF L M + + VT +L C + V
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 265 KLG 267
G
Sbjct: 592 SEG 594
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 51/372 (13%)
Query: 89 QLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE---YVRLMLEEGKRP 145
LH + ++D A ++F + P+R+ +WN +I G + + + + + +M +E P
Sbjct: 69 DLHHR--DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG--------- 196
N T +L CAK +++GK++H ALK F ++S+L+ MY CG
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 197 ----------------------------VIGY--------SIRLFDGMEKKNVILWTAMI 220
+ GY + LFD M +++V+ W MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
NGF +A+ V R M+ R + VTL +L L ++LG+ +H G
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIR 306
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
+ + LI+MY CG+ + A VF +P + +TW+A+I + +AID F M
Sbjct: 307 IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM 366
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE-IEASKEHCTFMVQLLTRYGK 399
G P+ + +L+ C G VE+ R+F M + + +E EH MV LL R G
Sbjct: 367 RQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGL 426
Query: 400 LDEAQRFLEMSP 411
LDEA+ F+ P
Sbjct: 427 LDEAEEFILNMP 438
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 129/241 (53%), Gaps = 6/241 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
+I + + G+ AR +F++ +RSV +WN MISG + NGF ++A+E R M + RPN
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
++T++ +LP ++L +L+ G+ +H YA + S+L+ MYSKCG+I +I +F+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
+ ++NVI W+AMI+ +G +A+ M+ R V +L C V+
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 267 GKEVHGQVLKLGFASV---HYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTALIR 322
G+ Q++ + HY ++++ G G+ D A+ +P K + W AL+
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGC--MVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 323 A 323
A
Sbjct: 452 A 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/266 (17%), Positives = 101/266 (37%), Gaps = 52/266 (19%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV----IGYSIRLFDGM 208
+ P RT++ ++HA +K + + ++ + + + Y+ ++F+ M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR---ADTVTLTRMLCVCGELRRVK 265
++N W +I E+ +A+ ++ + T +L C + +++
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN------------------------ 301
GK++HG LK GF +V + L+ MY CG +
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 302 ---------------------AKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
A+++F + + ++W +I Y ++++A+++F M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVE 366
PN T +VL R G +E
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLE 291
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI ++ K G ++ A VFE PR +V W+AMI+G A +G +A++ M + G R
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ + + +L C+ +++G RR+ + V
Sbjct: 373 PSDVAYINLLTACSHGGLVEEG---------RRYFSQMVSV------------------- 404
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
DG+E + + + M+D +G L+EA + +M + + D V +L C V
Sbjct: 405 -DGLEPR-IEHYGCMVDLLGRSGLLDEAEEFILNMPI---KPDDVIWKALLGACRMQGNV 459
Query: 265 KLGKEVHGQVLKL-GFASVHYVAAELINMYGACG 297
++GK V ++ + S YVA L NMY + G
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVA--LSNMYASQG 491
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 1/313 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +V ++ P +S +++ +SG G +E L+ +R E N +T + L + +
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSN 249
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
LR L +VH+ ++ F V +L+ MY KCG + Y+ R+FD +N+ L T +
Sbjct: 250 LRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTI 309
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
+D+ ++ EAL + M + T +L EL +K G +HG VLK G+
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY 369
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
+ V L+NMY G ++A+ F + + +TW +I + REA++ FD
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTYEIEASKEHCTFMVQLLTRYG 398
M+ G PN TF VL C GFVE +F+ LM ++++ +H T +V LL++ G
Sbjct: 430 MIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAG 489
Query: 399 KLDEAQRFLEMSP 411
+A+ F+ +P
Sbjct: 490 MFKDAEDFMRTAP 502
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 138/274 (50%), Gaps = 1/274 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+SLI L+ K AR++F+ P R+V +W AM+ G ++GF E L+ + M G+
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RPN V+ C+ +++GK+ H LK + H + ++L+ MYS C G +IR
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+ D + ++ ++++ + +E G E L V+R + +T L + LR
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ L +VH ++++ GF + LINMYG CG A+ VF + T ++ A
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
Y + + EA++LF M + PN +TF +L+
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLN 346
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 4/260 (1%)
Query: 153 ILPICAKLRTLKQGKEVHAYAL---KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
+L +CA L+ G+ +HA+ + + ++SL+ +Y KC + +LFD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 210 KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGK 268
++NV+ W AM+ +GF E L + +SM + + R + T + C R++ GK
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
+ HG LK G S +V L+ MY C A V +P +++ + Y
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCT 388
++E +D+ + N T+ + L + + A + M + A E C
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 389 FMVQLLTRYGKLDEAQRFLE 408
++ + + GK+ AQR +
Sbjct: 277 ALINMYGKCGKVLYAQRVFD 296
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G+++ AR+ F R + WN MISG +H+G REALE M+ G+
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN IT + +L C+ + ++QG +K+ P + + ++ + SK G+ +
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED 496
Query: 204 LFDGMEKK-NVILWTAMIDSC 223
+ +V+ W ++++C
Sbjct: 497 FMRTAPIEWDVVAWRTLLNAC 517
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 251 LTRMLCVCGELRRVKLGKEVHGQVL---KLGFASVHYVAAELINMYGACGVFDNAKLVFG 307
L +L VC +++G+ +H ++ + A Y LIN+Y C A+ +F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 308 AVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS-PNTFTFEAVLSICDRAGFVE 366
+P++ ++W A+++ Y + E + LF M +G S PN F V C +G +E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 367 DAFRFFDLMSTYEI---EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ +F Y + E + +M L + G EA R L+ P
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG---EAIRVLDDLP 198
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 174/327 (53%), Gaps = 3/327 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI L+ + G + ++VF+ R + +WN++I N P A+ + M +
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ +T++ + I ++L ++ + V + L++ FL +T+ ++++VMY+K G++ +
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELR 262
+F+ + +VI W +I +NGF +EA+ + M+ + A+ T +L C +
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++ G ++HG++LK G +V L +MYG CG ++A +F +P S+ W LI
Sbjct: 466 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 525
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIE 381
+G+ +A+ LF M+ G P+ TF +LS C +G V++ F++M T Y I
Sbjct: 526 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 585
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLE 408
S +H MV + R G+L+ A +F++
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIK 612
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRL-MLEEGK 143
+ L+ L+ GNV LAR F+ R V AWN MISG G E + L ML G
Sbjct: 90 AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL 149
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P++ T +L C RT+ G ++H ALK F+ V + +SL+ +YS+ +G +
Sbjct: 150 TPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LFD M +++ W AMI ++G EAL + ++ D+VT+ +L C E
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
G +H +K G S +V+ +LI++Y G + + VF + + ++W ++I+A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
Y E AI LF M + P+ T ++ SI + G
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 165/330 (50%), Gaps = 8/330 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI L+ + V AR +F+E P R + +WNAMISG +G +EAL L G R
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLR 243
Query: 145 P-NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +T++ +L C + +G +H+Y++K + + + L+ +Y++ G + +
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD M +++I W ++I + N A+++ + M+L+R + D +TL + + +L
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 264 VKLGKEVHGQVLKLG-FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
++ + V G L+ G F + ++ MY G+ D+A+ VF +P+ ++W +I
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 323 AYGYKEWYREAIDLFDLMMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
Y + EAI+++++M G + N T+ +VL C +AG + + + +
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
T + + + G+L++A P
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMID 221
L+ K +HA + + + +V + + L+ +Y G + + FD ++ ++V W MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 222 SCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
G +E + L+ D T +L C R V G ++H LK GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFM 182
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
YVAA LI++Y NA+++F +P + +W A+I Y +EA L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA-----LT 237
Query: 341 MSNGCSP-NTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
+SNG ++ T ++LS C AG + +E+ ++ L +G+
Sbjct: 238 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGR 297
Query: 400 LDEAQRFLE 408
L + Q+ +
Sbjct: 298 LRDCQKVFD 306
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 4/323 (1%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+++I ++ K G A + FE P + A+NA+ G G +A + + M G
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV 498
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ TM+ +L CA +G V+ +K F + +L+ M++KC + +I
Sbjct: 499 CPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIV 558
Query: 204 LFD--GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
LFD G EK V W M++ + +G EA+A R M++ + + + VT ++ EL
Sbjct: 559 LFDKCGFEKSTVS-WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAEL 617
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+++G VH +++ GF S V L++MY CG+ ++++ F + +K ++W ++
Sbjct: 618 SALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEI 380
AY A+ LF M N P++ +F +VLS C AG VE+ R F+ M ++I
Sbjct: 678 SAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKI 737
Query: 381 EASKEHCTFMVQLLTRYGKLDEA 403
EA EH MV LL + G EA
Sbjct: 738 EAEVEHYACMVDLLGKAGLFGEA 760
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 142/275 (51%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S LI ++ ++ A VFEE R+ S+W M++ AHNGF E LE LM R
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N + L A + L +G +H YA+++ + V++ +SLM MYSKCG + + +L
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +E ++V+ W+AMI S + G +EA+++ R M + + VTLT +L C +
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+LGK +H +K S A +I+MY CG F A F +P K ++ + AL + Y
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+A D++ M +G P++ T +L C
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+SL+ ++ K G +++A Q+F R V +W+AMI+ G EA+ R M+
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+PN +T+ +L CA + + GK +H YA+K + ++++ MY+KCG +++
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALK 457
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
F+ + K+ + + A+ + G N+A V ++M+L D+ T+ ML C
Sbjct: 458 AFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIR 322
G V+GQ++K GF S +VA LINM+ C A ++F +K +++W ++
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
Y EA+ F M PN TF
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTF 607
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 155/334 (46%), Gaps = 16/334 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L++++ K ++ ARQVF++ + V WN M+SGLA NG AL M
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +++ ++P +KL + +H +K+ F+ S L+ MY C + + +
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESV 256
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALA---VMRSMQLTRQRADTVTLTRMLCVCGEL 261
F+ + +K+ W M+ + NGF E L +MR+ + + + + G+L
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ G +H ++ G VA L++MY CG + A+ +F + D+ ++W+A+I
Sbjct: 317 VK---GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY--- 378
+Y + EAI LF MM PN T +VL C AG A R + Y
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC--AGVA--ASRLGKSIHCYAIK 429
Query: 379 -EIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+IE+ E T ++ + + G+ A + E P
Sbjct: 430 ADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 98 DLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE-GKRPNWITMMVILPI 156
DL+R +F+ V WN+MI G G REAL + M EE G P+ + L
Sbjct: 50 DLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
CA K+G +H + V + ++L+ MY K + + ++FD M K+V+ W
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
M+ +NG + AL + M+ D V+L ++ +L + + + +HG V+K
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
GF + ++ LI+MY C A+ VF V K +W ++ AY + ++ E ++L
Sbjct: 230 KGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 337 FDLM 340
FDLM
Sbjct: 288 FDLM 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
+ T +L + E + + +VHG ++ G + +LIN Y D ++++F +
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHN----QLINAYSLFQRQDLSRVIFDS 58
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM-SNGCSPNTFTFEAVLSICDRAGFVED 367
V D G + W ++IR Y +REA+ F M G P+ ++F L C + +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 368 AFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
R DL++ +E+ T +V++ + L A++ +
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFD 159
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 169/359 (47%), Gaps = 32/359 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L++++ G +D+AR VF+ + V +WN MISG E++E + M
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P +T++++L C+K++ K VH Y + + P + + ++L+ Y+ CG + ++R+
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 205 FDGMEKKNVILWTAMIDSCVENGFL-------------------------------NEAL 233
F M+ ++VI WT+++ VE G L NE+L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
+ R MQ D T+ +L C L +++G+ + + K + V LI+MY
Sbjct: 354 EIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMY 413
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
CG + A+ VF + + TWTA++ +EAI +F M P+ T+
Sbjct: 414 FKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473
Query: 354 AVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
VLS C+ +G V+ A +FF M S + IE S H MV +L R G + EA L P
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%), Gaps = 6/243 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+++ + +RGN+ LAR F++ P R +W MI G G E+LE R M G
Sbjct: 306 TSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ TM+ +L CA L +L+ G+ + Y K + V + ++L+ MY KCG + ++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M++++ WTAM+ NG EA+ V MQ + D +T +L C V
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 265 KLGKEVHGQVL---KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
++ ++ ++ + VHY +++M G G+ A + +P + S+ W AL
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGC--MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Query: 321 IRA 323
+ A
Sbjct: 544 LGA 546
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 134/304 (44%), Gaps = 32/304 (10%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G+V A ++F + P V WN MI G + E + ML+EG P+ T +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 155 -PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
+ L GK++H + +K ++ + ++L+ MYS CG++ + +FD K++V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
W MI E++ ++ M+ +VTL +L C +++ L K VH
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY--------- 324
V + + L+N Y ACG D A +F ++ + ++WT++++ Y
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 325 --------------------GY--KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
GY + E++++F M S G P+ FT +VL+ C
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 363 GFVE 366
G +E
Sbjct: 382 GSLE 385
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK--CGVIGYSIRLFDGMEK 210
IL +C +T Q K++H+ ++ R P+ T L V + G + Y+ +LF + +
Sbjct: 40 ILGVC---KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPE 96
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR----VKL 266
+V++W MI + E + + +M D+ T +L L+R +
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL---NGLKRDGGALAC 153
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY 326
GK++H V+K G S YV L+ MY CG+ D A+ VF + +W +I Y
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
+ Y E+I+L M N SP + T VLS C + + R + +S + E S
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 387 CTFMVQLLTRYGKLDEAQRFL 407
+V G++D A R
Sbjct: 274 ENALVNAYAACGEMDIAVRIF 294
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S++++ + K G + A ++F P ++ WN MI G GF + + LM G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN TM+ + L VHA+ LK H + +L+ MYS+C I + +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + + +++ +++I G EAL + ++++ ++ D V + +L C EL
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GKEVH V++LG V + LI+MY CG+ A +F +P+K +++ +LI
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
G + A + F ++ G P+ TF A+L C +G + F+ M S + IE
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFL 407
EH +MV+L+ GKL+EA F+
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFV 468
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 3/280 (1%)
Query: 83 DPSSLIQL-HFKRGNVDL--ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML 139
DP QL F N DL AR++F+ P RSV WN++I A L +L
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
RP+ T + ++ K + +H A+ S+++ YSK G+I
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ +LF + ++ LW MI GF ++ + + MQ + + T+ +
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ + + VH LK+ S YV L+NMY C +A VF ++ + + ++
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
LI Y ++EA+ LF + +G P+ VL C
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%)
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
++I K++T +++H++ K + + L Y+ + + +LFD +
Sbjct: 9 LIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPE 68
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
++V LW ++I + + L++ + + R D T + E K + +
Sbjct: 69 RSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCI 128
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
HG + G + ++ Y G+ A +F ++PD W +I YG ++
Sbjct: 129 HGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFW 188
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLS 357
+ I+LF+LM G PN +T A+ S
Sbjct: 189 DKGINLFNLMQHRGHQPNCYTMVALTS 215
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 149/344 (43%), Gaps = 32/344 (9%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A+ VF+ R WN MI G + + P +L + ML N T +L C+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYS-------------------------- 193
L ++ ++HA K + V V+SL+ Y+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 194 -----KCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
K G + ++ LF M +KN I WT MI V+ EAL + MQ + D
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
V+L L C +L ++ GK +H + K + LI+MY CG + A VF
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA 368
+ K WTALI Y Y REAI F M G PN TF AVL+ C G VE+
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 369 -FRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
F+ + Y ++ + EH +V LL R G LDEA+RF++ P
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP 411
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 6/243 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I+ + K G +D+A +F + ++ +W MISG +EAL+ M
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +++ L CA+L L+QGK +H+Y K R + L+ MY+KCG + ++ +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F ++KK+V WTA+I +G EA++ MQ + + +T T +L C V
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 265 KLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTAL 320
+ GK + + + L HY ++++ G G+ D AK +P K ++ W AL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGC--IVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Query: 321 IRA 323
++A
Sbjct: 423 LKA 425
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 37/292 (12%)
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPH---VTMVSSLMVMYSKCGVIGYSI 202
N M L C+K LKQ +HA LK + +T S + + + Y+
Sbjct: 13 NLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FDG ++ + LW MI + +L + + M + + T +L C L
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP------------ 310
+ ++H Q+ KLG+ + Y LIN Y G F A L+F +P
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 311 -------------------DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFT 351
+K +++WT +I Y + +EA+ LF M ++ P+ +
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 352 FEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
LS C + G +E ++ I ++ + + G+++EA
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 171/328 (52%), Gaps = 2/328 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+L++L+ + G + V R++ AWN++IS AH G +AL R M+ + +P
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ T+ + C + GK++H + + R + + +SL+ MYSK G + + +F
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVI-RTDVSDEFVQNSLIDMYSKSGSVDSASTVF 462
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ ++ ++V+ W +M+ +NG EA+++ M + + VT ++ C + ++
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
GK VH +++ G + + LI+MY CG + A+ VF A+ + ++W+++I AYG
Sbjct: 523 KGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
AI F+ M+ +G PN F VLS C +G VE+ +F+LM ++ + + E
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 386 HCTFMVQLLTRYGKLDEAQRFLEMSPSL 413
H + LL+R G L EA R ++ P L
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 159/332 (47%), Gaps = 5/332 (1%)
Query: 83 DP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML 139
DP + LI+ + G+ D +R VFE P + +I A++ ++
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 92
Query: 140 EEGKRPNWITMMVILPICAKLRT-LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
E + + +L CA R L G +VH +K + +SL+ MY + G +
Sbjct: 93 SETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNL 152
Query: 199 GYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
+ ++FDGM ++++ W+ ++ SC+ENG + +AL + + M D VT+ ++ C
Sbjct: 153 SDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGC 212
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
EL +++ + VHGQ+ + F + L+ MY CG +++ +F + K +++WT
Sbjct: 213 AELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT 272
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
A+I +Y E+ +A+ F M+ +G PN T +VLS C G + +
Sbjct: 273 AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 379 EIEASKEHCTF-MVQLLTRYGKLDEAQRFLEM 409
E++ + E + +V+L GKL + + L +
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K G+VD A VF + RSV WN+M+ G + NG EA+ M
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +T + ++ C+ + +L++GK VH + L L + ++L+ MY+KCG + + +
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETV 561
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M ++++ W++MI++ +G + A++ M + + + V +L CG V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 265 KLGK 268
+ GK
Sbjct: 622 EEGK 625
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 8/333 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE--- 141
++L+ L+ + G ++ R++F P +WN++I LA + R E V L
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS--ERSLPEAVVCFLNAQRA 511
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G++ N IT +L + L + GK++H ALK T ++L+ Y KCG +
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 202 IRLFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
++F M E+++ + W +MI + N L +AL ++ M T QR D+ +L
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
+ ++ G EVH ++ S V + L++MY CG D A F +P + S +W ++
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCS-PNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TY 378
I Y EA+ LF+ M +G + P+ TF VLS C AG +E+ F+ F+ MS +Y
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ EH + M +L R G+LD+ + F+E P
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP 784
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + + G+ AR+VF+E P R+ +W ++SG + NG +EAL ++R M++EG
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 145 PNWITMMVILPICAKLRTLKQ--GKEVHAYALKRRFLPHVTMVSSLMVMYSKC-GVIGYS 201
N + +L C ++ ++ G+++H K + + + L+ MY KC G +GY+
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+ F +E KN + W ++I + G A + SMQ R T ++ L
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL 219
Query: 262 RR--VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
V+L +++ + K G + +V + L++ + G A+ VF + + ++T
Sbjct: 220 TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279
Query: 320 LIRAYGYKEWYREAIDLF-DLMMSNGCSPNTF 350
L+ ++W EA LF D+ SP ++
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPESY 311
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 5/249 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM--LEEG 142
S L+ K G++ AR+VF + R+ N ++ GL + EA + M + +
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306
Query: 143 KRPNWITMMVILP--ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCGVIG 199
+++ ++ P A+ LK+G+EVH + + + + + + +V MY+KCG I
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ R+F M K+ + W +MI +NG EA+ +SM+ + TL L C
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
L+ KLG+++HG+ LKLG V+ L+ +Y G + + +F ++P+ ++W +
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486
Query: 320 LIRAYGYKE 328
+I A E
Sbjct: 487 IIGALARSE 495
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFL 229
H+ K R V + ++L+ Y + G + ++FD M +N + W ++ NG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL--GKEVHGQVLKLGFASVHYVAA 287
EAL +R M ++ +L C E+ V + G+++HG + KL +A V+
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 288 ELINMYGAC-GVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
LI+MY C G A FG + K S++W ++I Y R A +F M +G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 347 PNTFTFEAVLS 357
P +TF ++++
Sbjct: 204 PTEYTFGSLVT 214
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K G +D A + F P R+ +WN+MISG A +G EAL+ M +G+
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 145 P-NWITMMVILPICAKLRTLKQG-KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P + +T + +L C+ L++G K + + P + S + + + G +
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD--- 774
Query: 203 RLFDGMEK----KNVILWTAMIDSC 223
+L D +EK NV++W ++ +C
Sbjct: 775 KLEDFIEKMPMKPNVLIWRTVLGAC 799
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 156/313 (49%), Gaps = 1/313 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR +FE + +N+M G + P E +LE+G P+ T +L CA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
+ L++G+++H ++K +V + +L+ MY++C + + +FD + + V+ + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
I NEAL++ R MQ + + +TL +L C L + LGK +H K F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
V LI+M+ CG D+A +F + K + W+A+I AY +++ +F+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYG 398
M S P+ TF +L+ C G VE+ ++F M S + I S +H MV LL+R G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 399 KLDEAQRFLEMSP 411
L++A F++ P
Sbjct: 382 NLEDAYEFIDKLP 394
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 2/240 (0%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
+LI ++ + +VD AR VF+ V +NAMI+G A P EAL R M + +P
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N IT++ +L CA L +L GK +H YA K F +V + ++L+ M++KCG + ++ +F
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ M K+ W+AMI + +G +++ + M+ + D +T +L C RV+
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVE 348
Query: 266 LGKEVHGQ-VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIRA 323
G++ Q V K G ++++ G ++A +P M W L+ A
Sbjct: 349 EGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K G++D A +FE+ + AW+AMI A++G +++ M E +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ IT + +L C+ +++G++ + + + +P + S++ + S+ G + +
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFLNEALAV 235
D + +LW ++ +C + L+ A V
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 164/328 (50%), Gaps = 9/328 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I + + G +D ARQ+F+ESP + V W AM+SG N EA E M E
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER--- 310
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N ++ +L + ++ KE+ R +V+ ++++ Y++CG I + L
Sbjct: 311 -NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNL 365
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M K++ + W AMI ++G EAL + M+ R + + + L C ++ +
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+LGK++HG+++K G+ + +V L+ MY CG + A +F + K ++W +I Y
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEAS 383
+ A+ F+ M G P+ T AVLS C G V+ ++F M+ Y + +
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H MV LL R G L++A ++ P
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 28/326 (8%)
Query: 88 IQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNW 147
I + + G + A +VF+ PR S ++N MISG NG E R + +E +
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNG----EFELARKLFDEMPERDL 126
Query: 148 ITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDG 207
++ V++ + R L + +E+ +R TM+S Y++ G + + +FD
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSG----YAQNGCVDDARSVFDR 182
Query: 208 MEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
M +KN + W A++ + V+N + EA + +S + L C+ G VK
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-------NWALVSWNCLLGGF--VKKK 233
Query: 268 KEVHGQVLKLGFASVHYVAA--ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
K V + +V V + +I Y G D A+ +F P + TWTA++ Y
Sbjct: 234 KIVEARQF-FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
EA +LFD M N ++ A+L+ + +E A FD+M +
Sbjct: 293 QNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 386 HCTFMVQLLTRYGKLDEAQRFLEMSP 411
T Q GK+ EA+ + P
Sbjct: 349 MITGYAQC----GKISEAKNLFDKMP 370
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 6/329 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAH-----NGFPREALEYVRLML 139
++L+ ++ K G++ A ++F P ++V +NAMISG + EA + M
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
G P+ T V+L C+ +TL+ G+++HA K F + S+L+ +Y+ G
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
++ F K+++ WT+MID V+N L A + R + + R + T++ M+ C
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ + G+++ G +K G + V I+MY G A VF V + T++A
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STY 378
+I + EA+++F+ M ++G PN F VL C G V ++F M + Y
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
I +++H T +V LL R G+L +A+ +
Sbjct: 591 RINPNEKHFTCLVDLLGRTGRLSDAENLI 619
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 8/315 (2%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
ARQ+F+ P R++ ++N++ISG GF +A+E E + + T L C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
+ L G+ +H + V +++ L+ MYSKCG + ++ LFD ++++ + W +
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML---CVCGELRRVKLGKEVHGQVL 275
+I V G E L ++ M T L +L C+ ++ G +H
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY-----GYKEWY 330
KLG V L++MY G A +F +P K +T+ A+I + E
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
EA LF M G P+ TF VL C A +E + L+ ++ + + +
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 391 VQLLTRYGKLDEAQR 405
++L G ++ +
Sbjct: 400 IELYALMGSTEDGMQ 414
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 3/264 (1%)
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
++ AK ++ GK H + +K P + ++++L+ MY KC +G++ +LFD M ++
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
N+I + ++I + GF +A+ + + + D T L CGE + LG+ +H
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
G V+ G + ++ LI+MY CG D A +F ++ ++W +LI Y
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAE 231
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICD---RAGFVEDAFRFFDLMSTYEIEASKEHCT 388
E ++L M +G + T+ +VL C GF+E + +E T
Sbjct: 232 EPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Query: 389 FMVQLLTRYGKLDEAQRFLEMSPS 412
++ + + G L EA + + PS
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPS 315
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILP 155
++ AR + S + S WN + G + + P E++ M G +PN +T +L
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLK 121
Query: 156 ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
CA L G+++ LK F V + ++L+ +Y C + ++FD M ++NV+
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W +++ + VENG LN M R D T+ +L CG + LGK VH QV+
Sbjct: 182 WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVM 239
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA---YGYKEWYRE 332
+ L++MY G + A+LVF + DK TW+A+I YG+ E E
Sbjct: 240 VRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAE---E 296
Query: 333 AIDLFDLMM-SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFM 390
A+ LF MM + PN TF VL C G V+D +++F M ++I+ H M
Sbjct: 297 ALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAM 356
Query: 391 VQLLTRYGKLDEAQRFLEMSP 411
V +L R G+L+EA F++ P
Sbjct: 357 VDILGRAGRLNEAYDFIKKMP 377
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 13/246 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI L+ AR+VF+E R+V +WN++++ L NG E M+ GKR
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI--GKR 209
Query: 145 --PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ TM+V+L C L GK VH+ + R + + ++L+ MY+K G + Y+
Sbjct: 210 FCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM-RSMQLTRQRADTVTLTRMLCVCGEL 261
+F+ M KNV W+AMI + GF EAL + + M+ + R + VT +LC C
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 262 RRVKLG-KEVH--GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTW 317
V G K H ++ K+ +HY A ++++ G G + A +P + ++ W
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGA--MVDILGRAGRLNEAYDFIKKMPFEPDAVVW 385
Query: 318 TALIRA 323
L+ A
Sbjct: 386 RTLLSA 391
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 23/238 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
++L+ ++ K G ++ AR VFE ++V W+AMI GLA GF EAL+ + ++M E
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 144 RPNWITMMVILPICAKLRTLKQG-KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
RPN++T + +L C+ + G K H + P + +++ + + G + +
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 203 RLFDGME-KKNVILWTAMIDSC-VENGFLNEALA---VMRSMQLTRQRADTVTL------ 251
M + + ++W ++ +C + + +E + R ++L +R+ + +
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 252 -TRMLCVCGELRRV----KLGKEVHGQVLKLG-----FASVHYVAAELINMYGACGVF 299
RM E+RRV K+ K L+LG F S + +E +++Y +F
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLDLF 488
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 1/328 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ ++ + K V R +F+E P ++N +IS + +L + R M G
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+L I A L +L+ G+++H AL + + +SL+ MY+KC + + +
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + ++ + WTA+I V+ G L + M+ + RAD T +L +
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LGK++H +++ G + + L++MY CG +A VF +PD+ +++W ALI A+
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAH 528
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEAS 383
AI F M+ +G P++ + VL+ C GFVE +F MS Y I
Sbjct: 529 ADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPK 588
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
K+H M+ LL R G+ EA++ ++ P
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEMP 616
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 4/278 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+++I H K G+V AR +F+ P R+V W ++ A N EA + R M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 144 -RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL--PHVTMVSSLMVMYSKCGVIGY 200
P+ +T +LP C +VHA+A+K F P +T+ + L+ Y + +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ LF+ + +K+ + + +I ++G E++ + M+ + + T + +L
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
L LG+++H + GF+ V ++++ Y +++F +P+ +++ +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
I +Y + Y ++ F M G F F +LSI
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 159/325 (48%), Gaps = 9/325 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHN-GFPREALEYVRLMLEEGKR- 144
++QL +V+ A +VF+ S WN +I AH+ EA R MLE G+
Sbjct: 89 ILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS 148
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +L CA + +GK+VH +K F V + + L+ +Y CG + + ++
Sbjct: 149 PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKV 208
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +++++ W +MID+ V G + AL + R MQ + + D T+ +L C L +
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSL 267
Query: 265 KLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
LG H +L+ + A V LI MY CG A+ VF + + +W A+I
Sbjct: 268 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 327
Query: 322 RAYGYKEWYREAIDLFDLMMSN--GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STY 378
+ EA++ FD M+ PN+ TF +L C+ GFV ++FD+M Y
Sbjct: 328 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 387
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEA 403
IE + EH +V L+ R G + EA
Sbjct: 388 CIEPALEHYGCIVDLIARAGYITEA 412
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 46/322 (14%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI L+ G +DLAR+VF+E P RS+ +WN+MI L G AL+ R M +
Sbjct: 190 NGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFE 248
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR---RFLPHVTMVSSLMVMYSKCGVIGYS 201
P+ TM +L CA L +L G HA+ L++ V + +SL+ MY KCG + +
Sbjct: 249 PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMA 308
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLCVCG 259
++F GM+K+++ W AMI +G EA+ M R+ R ++VT +L C
Sbjct: 309 EQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACN 368
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
V G++ +++ Y + YG + D
Sbjct: 369 HRGFVNKGRQYFDMMVR------DYCIEPALEHYGC--IVD------------------- 401
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG----FVEDAFRFFDLM 375
LI GY EAI D++MS P+ + ++L C + G E+ R +++
Sbjct: 402 LIARAGY---ITEAI---DMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIAR--NII 453
Query: 376 STYEI-EASKEHCTFMVQLLTR 396
T E E+S +C+ LL+R
Sbjct: 454 GTKEDNESSNGNCSGAYVLLSR 475
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPH---VTMVSSLMVMYSKCGVIGYSIRLFDGME 209
I + + Q K++HA+ L+ + + + ++ + S + Y+ R+FD +E
Sbjct: 51 IFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 210 KKNVILWTAMIDSCVEN-GFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLG 267
+ +W +I +C + EA + R M + D T +L C + G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K+VH Q++K GF YV LI++YG+CG D A+ VF +P++ ++W ++I A
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
Y A+ LF M P+ +T ++VLS C G
Sbjct: 231 GEYDSALQLFR-EMQRSFEPDGYTMQSVLSACAGLG 265
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 164/356 (46%), Gaps = 34/356 (9%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRP 145
LI + G A VF + S WN MI L+ N PREAL ++ +M+ +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG--------- 196
+ T ++ C +++ G +VH A+K F V ++LM +Y KCG
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 197 -------VIGYSIRL---------------FDGMEKKNVILWTAMIDSCVENGFLNEALA 234
++ ++ L F+ M +NV+ WTAMI + V+N +EA
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ 237
Query: 235 VMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYG 294
+ R MQ+ + + T+ +L +L + +G+ VH K GF ++ LI+MY
Sbjct: 238 LFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYS 297
Query: 295 ACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG-CSPNTFTFE 353
CG +A+ VF + K TW ++I + G EA+ LF+ M P+ TF
Sbjct: 298 KCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFV 357
Query: 354 AVLSICDRAGFVEDAFRFFD-LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
VLS C G V+D R+F ++ Y I +EH M+QLL + ++++A +E
Sbjct: 358 GVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNG------------------ 126
++L+ L+FK G D R+VF++ P RS+ +W M+ GL N
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 127 -------------FPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
P EA + R M + +PN T++ +L +L +L G+ VH YA
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEAL 233
K F+ + ++L+ MYSKCG + + ++FD M+ K++ W +MI S +G EAL
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEAL 337
Query: 234 AVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLG 267
++ M+ D +T +L C VK G
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K++H +++K + + +LI++ + G A LVF + + TW +IR+
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 328 EWYREAIDLFDLMM-SNGCSPNTFTFEAVLSIC----------------DRAGFVEDAFR 370
REA+ LF LMM S+ + FTF V+ C +AGF D F
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 371 FFDLMSTY 378
LM Y
Sbjct: 157 QNTLMDLY 164
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 163/357 (45%), Gaps = 36/357 (10%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI++ +VD A VF +V + AMI G +G + + M+ P+
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRF---------------------------- 178
+ +L C LK +E+HA LK F
Sbjct: 127 NYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFD 182
Query: 179 -LPHVTMVSSLMVM--YSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
+P V++ +++ YS+CG I ++ LF ++ K+ + WTAMID V N +N+AL +
Sbjct: 183 EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
Query: 236 MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
R MQ+ A+ T +L C +L ++LG+ VH V ++V LINMY
Sbjct: 243 FREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSR 302
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
CG + A+ VF + DK +++ +I EAI+ F M++ G PN T A+
Sbjct: 303 CGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 356 LSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
L+ C G ++ F+ M + +E EH +V LL R G+L+EA RF+E P
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP 419
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 38/288 (13%)
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T++ +L C + + +HA ++ +V L+ + S + Y+ +F +
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
NV L+TAMID V +G + +++ M D +T +L C +K+ +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCR 143
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD----------------- 311
E+H QVLKLGF S V +++ +YG G NAK +F +PD
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 312 --------------KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
K ++ WTA+I + +A++LF M S N FT VLS
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 358 ICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
C G +E + +E S ++ + +R G ++EA+R
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ + G+++ AR+VF + V ++N MISGLA +G EA+ R M+ G R
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN +T++ +L C+ L G EV ++KR F P + ++ + + G + +
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFN-SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 203 RLFDG--MEKKNVILWTAMIDSCVENG 227
R + +E +++L T ++ +C +G
Sbjct: 413 RFIENIPIEPDHIMLGT-LLSACKIHG 438
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 157/361 (43%), Gaps = 33/361 (9%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SL+ + + A VF E P+R AWN MISG AH G L + MLE +P
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 146 NWITMMVILPIC-AKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T ++ C A + G+ VHA LK + V +S++ Y+K G ++R
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 205 FDGME-------------------------------KKNVILWTAMIDSCVENGFLNEAL 233
+ +E +KN++ WT MI NG +AL
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQAL 322
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
M + +D +L C L + GK +HG ++ GF YV L+N+Y
Sbjct: 323 RFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLY 382
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
CG A FG + +K ++W ++ A+G +A+ L+D M+++G P+ TF
Sbjct: 383 AKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFI 442
Query: 354 AVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+L+ C +G VE+ F+ M Y I +H T M+ + R G L EA+ S
Sbjct: 443 GLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSS 502
Query: 413 L 413
L
Sbjct: 503 L 503
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 142/387 (36%), Gaps = 83/387 (21%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K G + ARQVF+ P AWN M++ + G +EA+ + +P+ +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG---------------- 196
IL CA L +K G+++ + ++ F + + +SL+ MY KC
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 197 ---------VIGY--------SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM 239
+ Y ++ +F M K+ W MI G L L++ + M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 240 QLTRQRADTVTLTRMLCVC-GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV 298
+ + D T + ++ C + V G+ VH +LK G++S +++ Y G
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 299 FDNAKL-------------------------------VFGAVPDKGSMTWTALIRAYGYK 327
D+A VF P+K +TWT +I YG
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHC 387
+A+ F MM +G + F + AVL C L I HC
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL---------LGHGKMIHGCLIHC 366
Query: 388 TF---------MVQLLTRYGKLDEAQR 405
F +V L + G + EA R
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADR 393
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I K G + A +VF +P +++ W MI+G NG +AL + M++ G
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +L C+ L L GK +H + F + + ++L+ +Y+KCG I + R
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + K+++ W M+ + +G ++AL + +M + + D VT +L C V
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 265 KLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNAK 303
+ G + ++K + H +I+M+G G AK
Sbjct: 455 EEGCMIFESMVKDYRIPLEVDHVTC--MIDMFGRGGHLAEAK 494
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 185 VSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ 244
++S + +K G I + ++FDGM + + + W M+ S G EA+A+ ++ +
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 245 RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKL 304
+ D + T +L C L VK G+++ V++ GF + V LI+MYG C +A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 305 VFGAV--PDKGSMTWTALIRAYGYKEWYREAIDLF 337
VF + + +TW +L+ AY E + A+D+F
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVF 161
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 161/328 (49%), Gaps = 9/328 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ + K G ++ + VF + R+V +W MIS +A+ M +G PN
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPN 371
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+T + ++ +K+G ++H +K F+ ++ +S + +Y+K + + + F+
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG--ELRRV 264
+ + +I W AMI +NGF +EAL + S + T +L E V
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISV 490
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
K G+ H +LKLG S V++ L++MY G D ++ VF + K WT++I AY
Sbjct: 491 KQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAY 550
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
+ ++LF M+ +P+ TF +VL+ C+R G V+ + F++M Y +E S
Sbjct: 551 SSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPS 610
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH + MV +L R G+L EA+ + P
Sbjct: 611 HEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 147/326 (45%), Gaps = 9/326 (2%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++++ ++ K G D A +FE V +WN ++SG N + AL +V M G
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGV 170
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ T L C G ++ + +K + + +S + MYS+ G + R
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR 230
Query: 204 LFDGMEKKNVILWTAMIDSCVENG-FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FD M K++I W +++ + G F EA+ + R M D V+ T ++ C
Sbjct: 231 VFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET 290
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+KL +++HG +K G+ S+ V L++ Y CGV + K VF + ++ ++WT +I
Sbjct: 291 DLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS 350
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
+ +A+ +F M +G PN TF +++ +++ + L +
Sbjct: 351 SN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVS 405
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ L ++ L++A++ E
Sbjct: 406 EPSVGNSFITLYAKFEALEDAKKAFE 431
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 8/231 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S I L+ K ++ A++ FE+ R + +WNAMISG A NGF EAL+ E
Sbjct: 411 NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TM 469
Query: 145 PNWITMMVILPICAKLR--TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
PN T +L A ++KQG+ HA+ LK + S+L+ MY+K G I S
Sbjct: 470 PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
++F+ M +KN +WT++I + +G + + M D VT +L C
Sbjct: 530 KVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKG 589
Query: 263 RVKLGKEVHG---QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
V G E+ +V L + HY +++M G G A+ + VP
Sbjct: 590 MVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELMSEVP 638
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 99 LARQVFEESPRR-SVSAWNAMISGLAHNGFPREALEYVRLMLEEG---KRPNWITMMVIL 154
+A ++F+ S +R + ++ N IS P AL + L+ G + + +T+ + L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
C LK+G ++H ++ F V + +++M MY K G ++ +F+ + +V+
Sbjct: 86 KACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVV 143
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
W ++ +N AL + M+ D T + L C LG ++ V
Sbjct: 144 SWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR-EA 333
+K G S V I MY G F A+ VF + K ++W +L+ + + EA
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSIC 359
+ +F MM G + +F +V++ C
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTC 286
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA-WNAMISGLAHNGFPREALEYVRLMLEEGK 143
S L+ + K +V+ A++VF+E P R S WNA+++G + +AL M EEG
Sbjct: 199 SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGV 258
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ T+ +L + G+ +H A+K + + ++L+ MY K + +
Sbjct: 259 GVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANS 318
Query: 204 LFDGMEKKNVILWTAMIDSCVEN--GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+F+ M+++++ W +++ CV + G + LA+ M + R D VTLT +L CG L
Sbjct: 319 IFEAMDERDLFTWNSVL--CVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRL 376
Query: 262 RRVKLGKEVHGQVLKLGF----ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
++ G+E+HG ++ G +S ++ L++MY CG +A++VF ++ K S +W
Sbjct: 377 ASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASW 436
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST 377
+I YG + A+D+F M G P+ TF +L C +GF+ + F M T
Sbjct: 437 NIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMET 496
Query: 378 -YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
Y I + +H ++ +L R KL+EA P
Sbjct: 497 VYNILPTSDHYACVIDMLGRADKLEEAYELAISKP 531
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G + A VF S R V +NA+ISG NG P +A+E R M G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T +L + L K+VH A K F + S L+ YSK + + ++
Sbjct: 159 PDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 205 FDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
FD + ++ + +LW A+++ + +AL V M+ T+T +L
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ G+ +HG +K G S V+ LI+MYG + A +F A+ ++ TW +++
Sbjct: 278 IDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
+ Y + + LF+ M+ +G P+ T VL C R
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 10/268 (3%)
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIRL 204
N T + L CA+ + G+++H + +++ FL +SL+ MY+KCG++ ++ +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F G E ++V + A+I V NG +A+ R M+ D T +L +
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTALIRA 323
+ K+VHG KLGF S YV + L+ Y ++A+ VF +PD+ S+ W AL+
Sbjct: 178 DV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNG 236
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
Y + +A+ +F M G + T +VLS +G +++ L S
Sbjct: 237 YSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK---TGS 293
Query: 384 KEHCTFMVQLLTRYGK---LDEAQRFLE 408
L+ YGK L+EA E
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFE 321
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 157/325 (48%), Gaps = 34/325 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ ++ K G + AR V +E RR V +WN+++ G A N +ALE
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE----------- 227
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+C ++ ++K + A LP V+ ++ VMY K +
Sbjct: 228 -----------VCREMESVKISHDAGTMA---SLLPAVSNTTTENVMYVK--------DM 265
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M KK+++ W MI ++N EA+ + M+ D V++T +L CG+ +
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LGK++HG + + + LI+MY CG + A+ VF + + ++WTA+I AY
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEAS 383
G+ +A+ LF + +G P++ F L+ C AG +E+ F LM+ Y+I
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLE 408
EH MV LL R GK+ EA RF++
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQ 470
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 107/222 (48%), Gaps = 8/222 (3%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L +RTL+ VH+ + + ++ LM Y+ + + ++FD + ++N
Sbjct: 48 VLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERN 104
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
VI+ MI S V NGF E + V +M R D T +L C + +G+++HG
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
K+G +S +V L++MYG CG A+LV + + ++W +L+ Y + + +
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVL-----SICDRAGFVEDAF 369
A+++ M S S + T ++L + + +V+D F
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMF 266
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 160/326 (49%), Gaps = 10/326 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I K G VD AR++F+E RSV W M++G N +A + +M E+ +
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE- 234
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+W +M++ ++ ++ EV + V ++++ + G I + R+
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMP-------VKPVIACNAMISGLGQKGEIAKARRV 287
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M+++N W +I NGF EAL + MQ R TL +L VC L +
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
GK+VH Q+++ F YVA+ L+ MY CG +KL+F P K + W ++I Y
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 325 GYKEWYREAIDLF-DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
EA+ +F ++ +S PN TF A LS C AG VE+ + ++ M S + ++
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLE 408
H MV +L R G+ +EA ++
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMID 493
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 123/236 (52%), Gaps = 7/236 (2%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
++G + AR+VF+ R+ ++W +I NGF EAL+ LM ++G RP + T++
Sbjct: 277 QKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLIS 336
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
IL +CA L +L GK+VHA ++ +F V + S LM MY KCG + S +FD K+
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKD 396
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLT-RQRADTVTLTRMLCVCGELRRVKLGKEVH 271
+I+W ++I +G EAL V M L+ + + VT L C V+ G +++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 272 ---GQVLKLGFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTALIRA 323
V + + HY A +++M G G F+ A +++ + + W +L+ A
Sbjct: 457 ESMESVFGVKPITAHY--ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ + K G +D AR+VF+ P R+V +W A++ G HNG + E + + E +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG-KVDVAESLFWKMPEKNK 141
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC--GVIGYSI 202
+W M++ L+ G+ A L +P ++ +++ C G + +
Sbjct: 142 VSWTVMLIGF--------LQDGRIDDACKL-YEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FD M +++VI WT M+ +N +++A + M + V+ T ML +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSMLMGYVQNG 248
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAA--ELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
R++ +E+ V V A +I+ G G A+ VF ++ ++ +W +
Sbjct: 249 RIEDAEEL------FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTV 302
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
I+ + + EA+DLF LM G P T ++LS+C
Sbjct: 303 IKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 145/330 (43%), Gaps = 63/330 (19%)
Query: 84 PSSLIQL-HFKR-GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
P++ +++ H R G + AR++F+ +S+S+WN+M++G N PR+A R + +E
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDA----RKLFDE 73
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
N I+ + L+ Y K G I +
Sbjct: 74 MPDRNIISW-----------------------------------NGLVSGYMKNGEIDEA 98
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
++FD M ++NV+ WTA++ V NG ++ A ++ M + V+ T ML +
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKNKVSWTVMLIGFLQD 154
Query: 262 RRVKLGKEVHGQVL-KLGFASVHYVAAELINMYGAC--GVFDNAKLVFGAVPDKGSMTWT 318
R+ +++ + K A + +G C G D A+ +F + ++ +TWT
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMI-------HGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
++ YG +A +FD+M ++ ++L + G +EDA F++M
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK 263
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ A C M+ L + G++ +A+R +
Sbjct: 264 PVIA----CNAMISGLGQKGEIAKARRVFD 289
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 38/363 (10%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ LH K G + ARQVF+E P+ ++SA+N MISG +G +E L V+ M G++ +
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKAD 134
Query: 147 WITM-MVILPICAKLRTLKQGKE----VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
T+ MV+ ++ T+ + VHA +K ++++L+ Y K G + +
Sbjct: 135 GYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESA 194
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRS----------------------- 238
+F+ M+ +NV+ T+MI + GF+ +A + +
Sbjct: 195 RTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETA 254
Query: 239 -----MQLTRQRA----DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
M ++ QRA + T ++ C L ++G++VH Q++K G + + + L
Sbjct: 255 KRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSL 314
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNT 349
++MY CG ++A+ VF + +K +WT++I YG EA++LF M PN
Sbjct: 315 LDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNY 374
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
TF LS C +G V+ + F+ M Y ++ EH +V L+ R G L++A F
Sbjct: 375 VTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFAR 434
Query: 409 MSP 411
P
Sbjct: 435 AMP 437
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 124/244 (50%), Gaps = 7/244 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNG-FPREALEYVRLMLEEGK 143
+S+I + +G V+ A ++F + + + +NAM+ G + +G + +++ M G
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T ++ C+ L + + G++VHA +K H+ M SSL+ MY+KCG I + R
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD M++KNV WT+MID +NG EAL + M+ R + VT L C
Sbjct: 330 VFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 264 VKLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTA 319
V G E+ + + + HY A ++++ G G + A A+P++ S W A
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHY--ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAA 447
Query: 320 LIRA 323
L+ +
Sbjct: 448 LLSS 451
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 164 KQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSC 223
K GK++HA +K F P + + L++++ KCG + Y+ ++FD + K + + MI
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV-----KLGKEVHGQVLKLG 278
+++G + E L +++ M + ++AD TL+ +L L + VH +++K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY-------------- 324
+ L++ Y G ++A+ VF + D+ + T++I Y
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 325 ---------------GYK---EWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
G+ E + ++D++ M G PN TF +V+ C
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 104 FEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGKRPNWITMMVILPICAKLRT 162
F+ P S S WN +I G +++ P + L Y R++L RP+ T L C ++++
Sbjct: 65 FDSDP--STSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
+ + E+H ++ FL + +SL+ YS G + + ++FD M ++++ W MI
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
G N+AL++ + M D+ TL +L C + + +G +H + S
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
+V+ LI+MY CG +NA VF + + +TW ++I YG EAI F M++
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLD 401
+G PN TF +L C G V++ F++MS+ + + + +H MV L R G+L+
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 402 EAQRFLEM 409
+ LEM
Sbjct: 363 NS---LEM 367
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 126/242 (52%), Gaps = 8/242 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL++ + G+V++A +VF+E P R + +WN MI +H G +AL + M EG
Sbjct: 146 TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVC 205
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T++ +L CA + L G +H A R V + ++L+ MY+KCG + +I +
Sbjct: 206 GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGV 265
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+GM K++V+ W +MI +G EA++ R M + R + +T +L C V
Sbjct: 266 FNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLV 325
Query: 265 KLGKEVHGQVLKLGFASV----HYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTA 319
K G E H +++ F HY ++++YG G +N+ ++++ + + + W
Sbjct: 326 KEGVE-HFEIMSSQFHLTPNVKHY--GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRT 382
Query: 320 LI 321
L+
Sbjct: 383 LL 384
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 167/364 (45%), Gaps = 40/364 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGK 143
+SL+ ++ + G LA ++FE+ P +SV +NA ISGL NG LM + +
Sbjct: 168 TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSE 227
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T + + CA L L+ G+++H +K+ F + ++L+ MYSKC +
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 204 LFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT------------ 250
+F + + +N+I W ++I + NG A+ + + + D+ T
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 251 -----------------------LTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
LT +L C ++ +K GKE+HG V+K +V
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 288 ELINMYGACGVFDNAKLVFGAV--PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
LI+MY CG+ A+ +F K + W +I YG AI++F+L+
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKV 467
Query: 346 SPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
P+ TF AVLS C G VE + F LM Y + S EH M+ LL R G+L EA+
Sbjct: 468 EPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAK 527
Query: 405 RFLE 408
++
Sbjct: 528 EVID 531
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 155/293 (52%), Gaps = 5/293 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K V A +V +E P R +++ NA +SGL NGF R+A G
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +T+ +L C ++ G ++H A+K F V + +SL+ MYS+CG + R+
Sbjct: 130 MNSVTVASVLGGCGD---IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARM 186
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
F+ + K+V+ + A I +ENG +N +V M + + + + VT + C L
Sbjct: 187 FEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLN 246
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD-KGSMTWTALIR 322
++ G+++HG V+K F V LI+MY C + +A +VF + D + ++W ++I
Sbjct: 247 LQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVIS 306
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
+ A++LF+ + S G P++ T+ +++S + G V +AF+FF+ M
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 4/216 (1%)
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T +L CAKL + QG+ +HA +K F V ++L+ MY K + ++++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
D M ++ + A + +ENGF +A + +++ ++VT+ +L CG+ +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD---I 145
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G ++H +K GF YV L++MY CG + A +F VP K +T+ A I
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 325 GYKEWYREAIDLFDLMMS-NGCSPNTFTFEAVLSIC 359
+F+LM + PN TF ++ C
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 4/309 (1%)
Query: 104 FEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTL 163
F+ +R + + GL G +EA V L+ G + T V+L C + +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEA---VGLLWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 164 KQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSC 223
+GK +HA F + + L+++Y+ G + + LF ++ +++I W AMI
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH 283
V+ G E L + M+ R D T + C L R++ GK H ++K S
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 284 YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
V + L++MY C F + VF + + +TWT+LI YGY E + F+ M
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFR-FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDE 402
GC PN TF VL+ C+ G V+ + F+ + Y IE +H MV L R G+L E
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 403 AQRFLEMSP 411
A F+ SP
Sbjct: 365 AYEFVMKSP 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ L+ G++ A +F R + WNAMISG G +E L M + P+
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
T + C+ L L+ GK HA +KR ++ + S+L+ MY KC R+FD
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
+ +NVI WT++I +G ++E L M+ R + VT +L C V
Sbjct: 269 QLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDK 328
Query: 267 GKEVHGQVLKLGFA----SVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTALI 321
G E H +K + HY A +++ G G A + V + + W +L+
Sbjct: 329 GWE-HFYSMKRDYGIEPEGQHYAA--MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 322 RA 323
A
Sbjct: 386 GA 387
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++FK + +VF++ R+V W ++ISG ++G E L+ M EEG R
Sbjct: 248 SALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR 307
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF 178
PN +T +V+L C + +G E H Y++KR +
Sbjct: 308 PNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDY 340
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 9/317 (2%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
+ G VD AR +F+E R+V W MI+G N A + +M E+ + +W +M++
Sbjct: 184 REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE-VSWTSMLL 242
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+ ++ ++ EV + V ++++V + + G I + R+FD ME ++
Sbjct: 243 GYTLSGRIEDAEEFFEVMP-------MKPVIACNAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
W MI + GF EAL + MQ R +L +L VC L ++ G++VH
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHA 355
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+++ F YVA+ L+ MY CG AKLVF K + W ++I Y E
Sbjct: 356 HLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEE 415
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMV 391
A+ +F M S+G PN T A+L+ C AG +E+ F+ M S + + + EH + V
Sbjct: 416 ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475
Query: 392 QLLTRYGKLDEAQRFLE 408
+L R G++D+A +E
Sbjct: 476 DMLGRAGQVDKAMELIE 492
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 62/319 (19%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G ++ AR+ F+ +++ +WN+++SG NG P+EA R + +E N ++ ++
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA----RQLFDEMSERNVVSWNGLV 86
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
K R + + + V +R + MV Y + G++G + LF M ++N +
Sbjct: 87 SGYIKNRMIVEARNVFELMPERNVVSWTAMVKG----YMQEGMVGEAESLFWRMPERNEV 142
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT-------------------------- 248
WT M +++G +++A + M + A T
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 249 -VTLTRMLCVCGELRRVKLGK----------EVHGQVLKLGFA-SVHYVAAE-------- 288
VT T M+ + RV + + EV + LG+ S AE
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 289 --------LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
+I +G G A+ VF + D+ + TW +I+AY K + EA+DLF M
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM 322
Query: 341 MSNGCSPNTFTFEAVLSIC 359
G P+ + ++LS+C
Sbjct: 323 QKQGVRPSFPSLISILSVC 341
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S L+ ++ K G + A+ VF+ + + WN++ISG A +G EAL+ M G
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM 429
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN +T++ IL C+ L++G E+ +++ +F P V S + M + G + ++
Sbjct: 430 PNKVTLIAILTACSYAGKLEEGLEIFE-SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 203 RLFDGME-KKNVILWTAMIDSCVENGFLNEA 232
L + M K + +W A++ +C + L+ A
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLA 519
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 157/329 (47%), Gaps = 8/329 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ + + G VD A ++F++ P ++V +W MI GL N EAL+ + ML +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
++ CA G +VH +K FL + +SL+ Y+ C IG S ++
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD + V +WTA++ N +AL++ M + T L C L +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA- 323
GKE+HG +KLG + +V L+ MY G ++A VF + K ++W ++I
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 324 --YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST--YE 379
+G +W A +F M+ P+ TF +LS C GF+E + F MS+
Sbjct: 403 AQHGRGKW---AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
I+ +H T MV +L R GKL EA+ +E
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIE 488
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +F+E P R V +WN+MISG G A++ + +E + ++ ++ C +
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVK----LFDEMPERSVVSWTAMVNGCFR 140
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
+ Q + + Y + + +S++ Y + G + +++LF M KNVI WT M
Sbjct: 141 SGKVDQAERLF-YQMP---VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTM 196
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
I +N EAL + ++M ++ + T ++ C +G +VHG ++KLGF
Sbjct: 197 ICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF 256
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
YV+A LI Y C +++ VF + WTAL+ Y + + +A+ +F
Sbjct: 257 LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVE 366
M+ N PN TF + L+ C G ++
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLD 343
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 9/245 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI + + +R+VF+E V+ W A++SG + N +AL ML
Sbjct: 264 ASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL 323
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T L C+ L TL GKE+H A+K + +SL+VMYS G + ++ +
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + KK+++ W ++I C ++G A + M + D +T T +L C +
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 265 KLGKEVHGQVLKLGFASV-----HYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWT 318
+ G+++ + G + HY ++++ G CG A +L+ V M W
Sbjct: 444 EKGRKLF-YYMSSGINHIDRKIQHYTC--MVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Query: 319 ALIRA 323
AL+ A
Sbjct: 501 ALLSA 505
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 180 PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM 239
PHV++ + ++ Y++ + ++ LFD M ++V+ W +MI CVE G +N A+ + M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 240 QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA--ELINMYGACG 297
+R+ V+ T M+ C +V + + Q+ V AA +++ Y G
Sbjct: 124 P---ERS-VVSWTAMVNGCFRSGKVDQAERLFYQM------PVKDTAAWNSMVHGYLQFG 173
Query: 298 VFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
D+A +F +P K ++WT +I E EA+DLF M+ + F V++
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 358 ICDRA 362
C A
Sbjct: 234 ACANA 238
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 159/360 (44%), Gaps = 33/360 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++++ + K G + AR VF+ P R V +WN M+ G A +G EAL + + G +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N + +L C K R L+ ++ H L FL +V + S++ Y+KCG + + R
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 205 FDGME-------------------------------KKNVILWTAMIDSCVENGFLNEAL 233
FD M +KN + WTA+I V G N AL
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
+ R M + + T + LC + ++ GKE+HG +++ V + LI+MY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 294 GACGVFDNAKLVFGAVPDKGSMT-WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
G + ++ VF DK W +I A +A+ + D M+ PN T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 353 EAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+L+ C +G VE+ R+F+ M+ + I +EH ++ LL R G E R +E P
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMP 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 6/257 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K G+++ A ++F E P ++ +W A+I+G G AL+ R M+ G +
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P T L A + +L+ GKE+H Y ++ P+ ++SSL+ MYSK G + S R+
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 205 FDGMEKK-NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
F + K + + W MI + ++G ++AL ++ M R + + TL +L C
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 264 VKLG-KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALI 321
V+ G + ++ G A LI++ G G F +P + W A++
Sbjct: 429 VEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAIL 488
Query: 322 ---RAYGYKEWYREAID 335
R +G +E ++A D
Sbjct: 489 GVCRIHGNEELGKKAAD 505
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 154/370 (41%), Gaps = 70/370 (18%)
Query: 107 SPR-RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQ 165
+PR R + + +S A +A+ + + ++G R + + +L C ++LKQ
Sbjct: 5 NPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQ 64
Query: 166 GKEVHAY----ALKRRFLPHVTMVSSLMVMYSKCG-----------------------VI 198
GK +H + KR P+ + + L+ MY KCG V
Sbjct: 65 GKWIHRHLKITGFKR---PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 199 GYS-----IR---LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT 250
GY +R +FD M +++V+ W M+ ++G L+EAL + + + + + +
Sbjct: 122 GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFS 181
Query: 251 LTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFG--- 307
+L C + R+++L ++ HGQVL GF S ++ +I+ Y CG ++AK F
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 308 ----------------------------AVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
+P+K ++WTALI Y + A+DLF
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
M++ G P FTF + L + M + + + ++ + ++ G
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGS 361
Query: 400 LDEAQRFLEM 409
L+ ++R +
Sbjct: 362 LEASERVFRI 371
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ G ++ A ++F+E P RSV W A+ SG +G REA++ + M+E G +
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ ++ +L C + L G+ + Y + + + ++L+ +Y+KCG + + +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +K+++ W+ MI N F E + + M + D ++ L C L +
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LG+ + + F + ++A LI+MY CG VF + +K + A I
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEAS 383
+ + +F G SP+ TF +L C AG ++D RFF+ +S Y ++ +
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFL 407
EH MV L R G LD+A R +
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLI 473
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 131/264 (49%)
Query: 103 VFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRT 162
+F + ++ +N++I+G +N E L+ + + G + T ++L C + +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
K G ++H+ +K F V ++SL+ +YS G + + +LFD + ++V+ WTA+
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
+G EA+ + + M + D+ + ++L C + + G+ + + ++
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
+V L+N+Y CG + A+ VF ++ +K +TW+ +I+ Y + +E I+LF M+
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 343 NGCSPNTFTFEAVLSICDRAGFVE 366
P+ F+ LS C G ++
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALD 330
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 119/243 (48%), Gaps = 6/243 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K G ++ AR VF+ + + W+ MI G A N FP+E +E ML+E +
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +++ L CA L L G+ + + FL ++ M ++L+ MY+KCG + +
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M++K++++ A I +NG + + AV + D T +LC C +
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLI 430
Query: 265 KLGKEVHGQ---VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTAL 320
+ G V L HY +++++G G+ D+A + +P + ++ W AL
Sbjct: 431 QDGLRFFNAISCVYALKRTVEHY--GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Query: 321 IRA 323
+
Sbjct: 489 LSG 491
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC-GVIGYSIRLFDGMEKKNVILWTAMI 220
T+ K++H +L L H T + +L++ + YS LF + N+ L+ ++I
Sbjct: 25 TVNHLKQIHV-SLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLI 83
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
+ V N +E L + S++ T +L C KLG ++H V+K GF
Sbjct: 84 NGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFN 143
Query: 281 SVHYVAA--ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
H VAA L+++Y G ++A +F +PD+ +TWTAL Y +REAIDLF
Sbjct: 144 --HDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYG 398
M+ G P+++ VLS C G ++ M E++ + T +V L + G
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCG 261
Query: 399 KLDEAQRFLE 408
K+++A+ +
Sbjct: 262 KMEKARSVFD 271
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 165/351 (47%), Gaps = 38/351 (10%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK--RPNWITMMVIL 154
+D A Q+ + S + ++ A N+MI + P ++ ++ R +L G +P+ T+ ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 155 PICAKLRTLKQGKEVHAYALKRRFL--PHVTMVSSLMVMYS------------------- 193
C LR + G +VH ++R F PHV + L+ +Y+
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQ--TGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 194 ------------KCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
+CG + ++ +LF+GM +++ I W AMI + G EAL V MQL
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN 301
+ + V + +L C +L + G+ H + + +A L+++Y CG +
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 302 AKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
A VF + +K TW++ + + + ++LF LM +G +PN TF +VL C
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 362 AGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
GFV++ R FD M + + IE EH +V L R G+L++A ++ P
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G+V AR++FE P R AWNAMISG A G REAL LM EG + N + M+ +L
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
C +L L QG+ H+Y + + V + ++L+ +Y+KCG + ++ +F GME+KNV
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
W++ ++ NGF + L + M+ + VT +L C + V G+ H
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDS 366
Query: 275 LKLGFAS----VHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTALIRA 323
++ F HY L+++Y G ++A + +P K + W++L+ A
Sbjct: 367 MRNEFGIEPQLEHYGC--LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 112/277 (40%), Gaps = 35/277 (12%)
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLM--VMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
T K+ +++HA L +V + V S + Y+ ++ D EK + +M
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
I + ++ ++ R + + + D T+ ++ C LR + G +VHG ++
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAV---------------------------- 309
GF + +V LI++Y G D+ VF ++
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLF 197
Query: 310 ---PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
P++ + W A+I Y REA+++F LM G N +VLS C + G ++
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALD 257
Query: 367 DAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
+ +I+ + T +V L + G +++A
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K G+++ A +VF ++V W++ ++GLA NGF + LE LM ++G
Sbjct: 279 TTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVT 338
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN +T + +L C+ + + +G+ H +++ F P + L+ +Y++ G + ++
Sbjct: 339 PNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
Query: 203 RLFDGME-KKNVILWTAMI 220
+ M K + +W++++
Sbjct: 398 SIIQQMPMKPHAAVWSSLL 416
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 144/284 (50%), Gaps = 9/284 (3%)
Query: 137 LMLEEG----KRPNW----ITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSL 188
+MLE+ KR W + + C R + G H ALK F+ V + SSL
Sbjct: 102 VMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSL 161
Query: 189 MVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
+V+Y G + + ++F+ M ++NV+ WTAMI + ++ L + M+ + +
Sbjct: 162 VVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPND 221
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
T T +L C + G+ VH Q L +G S +++ LI+MY CG +A +F
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM-SNGCSPNTFTFEAVLSICDRAGFVED 367
+K ++W ++I Y +AI+LF+LMM +G P+ T+ VLS C AG V++
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKE 341
Query: 368 AFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+FF+LM+ + ++ H + +V LL R+G L EA +E P
Sbjct: 342 GRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMP 385
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL+ L+ G V+ A +VFEE P R+V +W AMISG A L+ M +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T +L C L QG+ VH L ++ + +SL+ MY KCG + + R+
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMR-SMQLTRQRADTVTLTRMLCVCGELRR 263
FD K+V+ W +MI ++G +A+ + M + + D +T +L C
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 264 VKLGKEVHGQVLKLGFASV--HYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTAL 320
VK G++ + + G HY L+++ G G+ A + +P K S+ W +L
Sbjct: 339 VKEGRKFFNLMAEHGLKPELNHYSC--LVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 321 I 321
+
Sbjct: 397 L 397
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 162/334 (48%), Gaps = 15/334 (4%)
Query: 84 PSSLIQLHFKRGNVDL--ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
P++LI + + G + + A ++FE+ R +WN+M+ GL G R+A R + +E
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA----RRLFDE 210
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVM-YSKCGVIGY 200
+ + I+ +L A+ R + + A+ L + T+ S MVM YSK G +
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSK-----AFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 201 SIRLFDGME--KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
+ +FD M KNV+ WT +I E G L EA ++ M + + D + +L C
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
E + LG +H + + S YV L++MY CG A VF +P K ++W
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR-FFDLMST 377
++ G +EAI+LF M G P+ TF AVL C+ AG +++ F+ +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 378 YEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
Y++ EH +V LL R G+L EA + ++ P
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 12/310 (3%)
Query: 98 DLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPIC 157
+LA +VF + +V N++I A N P +A M G + T +L C
Sbjct: 68 NLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
Query: 158 AKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY--SIRLFDGMEKKNVIL 215
+ L K +H + K + + ++L+ YS+CG +G +++LF+ M +++ +
Sbjct: 128 SGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS 187
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W +M+ V+ G L +A + M QR D ++ ML R + E+ ++
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMP---QR-DLISWNTMLDGYARCREMSKAFELFEKMP 243
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFG--AVPDKGSMTWTALIRAYGYKEWYREA 333
+ S + ++ Y G + A+++F +P K +TWT +I Y K +EA
Sbjct: 244 ERNTVS----WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 299
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQL 393
L D M+++G + ++L+ C +G + R ++ + ++ ++ +
Sbjct: 300 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 394 LTRYGKLDEA 403
+ G L +A
Sbjct: 360 YAKCGNLKKA 369
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 22/279 (7%)
Query: 143 KRPNWITMMVI-------LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC 195
+ P+W++ I LP CA L +KQ +HA ++R + + L+ S C
Sbjct: 8 RAPSWVSSRRIFEERLQDLPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLC 64
Query: 196 GVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
++R+F+ +++ NV L ++I + +N +A V MQ AD T +L
Sbjct: 65 RQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC---GVFDNAKLVFGAVPDK 312
C + + K +H + KLG +S YV LI+ Y C GV D KL F + ++
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL-FEKMSER 183
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
+++W +++ R+A LFD M + ++ +L R + AF F
Sbjct: 184 DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELF 239
Query: 373 DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ M E + + MV ++ G ++ A+ + P
Sbjct: 240 EKMP----ERNTVSWSTMVMGYSKAGDMEMARVMFDKMP 274
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K GN+ A VF + P++ + +WN M+ GL +G +EA+E M EG R
Sbjct: 354 NALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIR 413
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
P+ +T + +L C + +G + + Y++++ + +P V L+ + + G + +I
Sbjct: 414 PDKVTFIAVLCSCNHAGLIDEGID-YFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 203 RLFDGME-KKNVILWTAMIDSC 223
++ M + NV++W A++ +C
Sbjct: 473 KVVQTMPMEPNVVIWGALLGAC 494
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 137/251 (54%), Gaps = 2/251 (0%)
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDS 222
++ G+ +H+ ++ F + + +SL+ +Y+ CG + + ++FD M +K+++ W ++I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
ENG EALA+ M + D T+ +L C ++ + LGK VH ++K+G
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
+ + L+++Y CG + AK +F + DK S++WT+LI + +EAI+LF M S
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 343 N-GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKL 400
G P TF +L C G V++ F +F M Y+IE EH MV LL R G++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 401 DEAQRFLEMSP 411
+A +++ P
Sbjct: 244 KKAYEYIKSMP 254
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 1/186 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ L+ G+V A +VF++ P + + AWN++I+G A NG P EAL M +G +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T++ +L CAK+ L GK VH Y +K ++ + L+ +Y++CG + + L
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRAD-TVTLTRMLCVCGELRR 263
FD M KN + WT++I NGF EA+ + + M+ T +T +L C
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 264 VKLGKE 269
VK G E
Sbjct: 207 VKEGFE 212
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRP 145
L+ L+ + G V+ A+ +F+E ++ +W ++I GLA NGF +EA+E + M EG P
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
IT + IL C+ +K+G E + + P + ++ + ++ G + +
Sbjct: 190 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 249
Query: 205 FDGME-KKNVILWTAMIDSCVENGFLNEA-LAVMRSMQLT-RQRADTVTLTRM 254
M + NV++W ++ +C +G + A A ++ +QL D V L+ M
Sbjct: 250 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 157/330 (47%), Gaps = 41/330 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G ++ AR+VF+ + V WN+MI+G G+ +A E M + R
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN IT TM+S Y K G G ++ L
Sbjct: 451 PNIITWN-------------------------------TMISG----YIKNGDEGEAMDL 475
Query: 205 FDGMEK-----KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
F MEK +N W +I ++NG +EAL + R MQ +R ++VT+ +L C
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
L K+ +E+HG VL+ ++H V L + Y G + ++ +F + K +TW +
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNS 595
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR-FFDLMSTY 378
LI Y Y A+ LF+ M + G +PN T +++ G V++ + F+ + + Y
Sbjct: 596 LIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDY 655
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
I + EHC+ MV L R +L+EA +F++
Sbjct: 656 HIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 139/324 (42%), Gaps = 40/324 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ ++ K G +D A + F R V AWN+++ NG EA+E V+ M +EG
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P +T + L+ Y++ G ++ L
Sbjct: 280 PGLVTWNI-----------------------------------LIGGYNQLGKCDAAMDL 304
Query: 205 FDGMEK----KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
ME +V WTAMI + NG +AL + R M L + VT+ + C
Sbjct: 305 MQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSC 364
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
L+ + G EVH +K+GF V L++MY CG ++A+ VF +V +K TW ++
Sbjct: 365 LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSM 424
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYE 379
I Y + +A +LF M PN T+ ++S + G +A F M +
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 380 IEASKEHCTFMVQLLTRYGKLDEA 403
++ + ++ + GK DEA
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEA 508
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 34/277 (12%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEG 142
LI + + G D A + ++ ++A W AMISGL HNG +AL+ R M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
PN +T+M + C+ L+ + QG EVH+ A+K F+ V + +SL+ MYSKCG + +
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
++FD ++ K+V W +MI + G+ +A + MQ R + +T M+
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS-----G 462
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+K G E E ++++ ++ + + TW +I
Sbjct: 463 YIKNGDE-----------------GEAMDLF--------QRMEKDGKVQRNTATWNLIIA 497
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
Y EA++LF M + PN+ T ++L C
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 13/288 (4%)
Query: 122 LAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--- 178
L NG EA + + + ++G + T + +L C ++ G+ +HA RF
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-----RFGLF 110
Query: 179 -LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMR 237
P V + + L+ MY+KCG I + ++FD M ++N+ W+AMI + E + R
Sbjct: 111 TEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR 170
Query: 238 SMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACG 297
M D ++L C V+ GK +H V+KLG +S V+ ++ +Y CG
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 298 VFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
D A F + ++ + W +++ AY + EA++L M G SP T+ ++
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 358 ICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT----RYGKLD 401
++ G + A M T+ I A T M+ L RY LD
Sbjct: 291 GYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 141/330 (42%), Gaps = 43/330 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ ++ K G + AR+VF+ R++ W+AMI + RE + RLM+++G
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IL CA ++ GK +H+ +K + + +S++ +Y+KCG + ++ +
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M +++VI W +++ + +NG EA V
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEA-------------------------------V 267
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA-----KL-VFGAVPDKGSMTWT 318
+L KE+ + + G + + LI Y G D A K+ FG D TWT
Sbjct: 268 ELVKEMEKEGISPGLVTWNI----LIGGYNQLGKCDAAMDLMQKMETFGITAD--VFTWT 321
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
A+I + +A+D+F M G PN T + +S C + +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+V + ++ GKL++A++ +
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 159/364 (43%), Gaps = 35/364 (9%)
Query: 83 DP---SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML 139
DP + + ++ G ++ AR VF+E R V WN MI G EA + M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKR--RFLPH-----VTM-------- 184
+ P+ + + I+ C + ++ + ++ + ++ R H VTM
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 185 ---------------VSSLMVM-YSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
VS+ MV YSKCG + + +FD EKK+++ WT MI + VE+ +
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
EAL V M + + D V++ ++ C L + K VH + G S +
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
LINMY CG D + VF +P + ++W+++I A +A+ LF M PN
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
TF VL C +G VE+ + F M+ Y I EH MV L R L EA +
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 408 EMSP 411
E P
Sbjct: 505 ESMP 508
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 147/336 (43%), Gaps = 32/336 (9%)
Query: 107 SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQG 166
SP S+ +N + L+ + PR + + + + G R + + + IL +K+ L +G
Sbjct: 72 SPPESI-VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEG 130
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
E+H A K L + + M MY+ CG I Y+ +FD M ++V+ W MI+
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK---------- 276
G ++EA + M+ + D + L ++ CG ++ + ++ +++
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 277 LGFASVH---------------------YVAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
+++ +V+ +++ Y CG D+A+++F K +
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 316 TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
WT +I AY ++ +EA+ +F+ M +G P+ + +V+S C G ++ A +
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 376 STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+E+ ++ + + G LD + E P
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP 406
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 81/147 (55%), Gaps = 2/147 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G +D R VFE+ PRR+V +W++MI+ L+ +G +AL M +E
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T + +L C+ +++GK++ A P + ++ ++ + ++ ++
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFL 229
+ + M NV++W +++ +C +G L
Sbjct: 503 VIESMPVASNVVIWGSLMSACRIHGEL 529
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 162/331 (48%), Gaps = 4/331 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE---SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
S+LI ++ G++ A VF + + SV+ WN+M+SG N AL + + +
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
+ T+ L IC L+ G +VH+ + + + S L+ +++ G I +
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+LF + K++I ++ +I CV++GF + A + R + AD ++ +L VC L
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL 456
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ GK++HG +K G+ S A L++MY CG DN ++F + ++ ++WT +I
Sbjct: 457 ASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGII 516
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEI 380
+G EA F M++ G PN TF +LS C +G +E+A + M S Y +
Sbjct: 517 VGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGL 576
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
E EH +V LL + G EA + P
Sbjct: 577 EPYLEHYYCVVDLLGQAGLFQEANELINKMP 607
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 6/323 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K G +D A +F P+ +V +WN +ISG G PR ALE++ M EG
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLV 235
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + L C+ L GK++H +K +S+L+ MYS CG + Y+ +
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Query: 205 FDGMEK----KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
F EK +V +W +M+ + N AL ++ + + D+ TL+ L +C
Sbjct: 296 FH-QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICIN 354
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
++LG +VH V+ G+ + V + L++++ G +A +F +P+K + ++ L
Sbjct: 355 YVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGL 414
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
IR + A LF ++ G + F +L +C + + L
Sbjct: 415 IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY 474
Query: 381 EASKEHCTFMVQLLTRYGKLDEA 403
E+ T +V + + G++D
Sbjct: 475 ESEPVTATALVDMYVKCGEIDNG 497
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 136/348 (39%), Gaps = 36/348 (10%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRPNWITMMVILPICA 158
A +VF+E R++ W M+SG +G P +A+E R ML+ E + N +L C
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 159 ------------------KLRT------------LKQGKEVHAYALKRRFL-PHVTMVSS 187
LR +K G+ + A + + L P T ++
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 188 LMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRAD 247
L+ Y K G++ ++ LF M + NV+ W +I V+ G AL + MQ D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLD 237
Query: 248 TVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFG 307
L L C + +GK++H V+K G S + + LI+MY CG A VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 308 A---VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGF 364
+ W +++ + E A+ L + + +++T L IC
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 365 VEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+ + L+ E + +V L G + +A + P+
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN 405
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
C K++ K+G+ + A+ +K+ +V + ++++ MY ++ + ++FD M ++N++ W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQR-ADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
T M+ +G N+A+ + R M + + A+ + +L CG + ++LG V+ ++
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAID 335
K + +++MY G A F + S +W LI Y EA+
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
LF M PN ++ ++S GFV+
Sbjct: 195 LFHRMP----QPNVVSWNCLIS-----GFVD 216
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 30/356 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K GN++ +R F+ +++ WNA++SG A+ P L ML+ G R
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFR 413
Query: 145 PNWITMMVILPIC--AKLRTL-----KQGKEVHAYALK---RRFLPHVTMVSSLMVM--- 191
P T L C +L+ L + G E + Y L R + + M +L+++
Sbjct: 414 PTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWA 473
Query: 192 ---------------YSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM 236
YS+ G S++L +E+ + + W I +C + + E + +
Sbjct: 474 SGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELF 533
Query: 237 RSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH-YVAAELINMYGA 295
+ M + R D T +L +C +L + LG +HG + K F+ +V LI+MYG
Sbjct: 534 KHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGK 593
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
CG + VF +K +TWTALI G + +EA++ F +S G P+ +F ++
Sbjct: 594 CGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISI 653
Query: 356 LSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
L+ C G V++ F M Y +E +H V LL R G L EA+ + P
Sbjct: 654 LTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 148/306 (48%), Gaps = 13/306 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ L+ + +++A QVFE+ P +S+ WN M+S L H GF +E + + R ++ G
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + +L + ++ L K++H A K+ +++V+SL+ Y KCG + R+
Sbjct: 213 LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERM 272
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +++ W A+I + ++ +AL + SM + T +L V ++ +
Sbjct: 273 FQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLL 332
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
G+++HG ++K G + + LI+ Y CG ++++L F + DK + W AL+ Y
Sbjct: 333 SCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY 392
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC------------DRAGFVEDAFRFF 372
K+ + LF M+ G P +TF L C R G+ ++ +
Sbjct: 393 ANKDG-PICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLS 451
Query: 373 DLMSTY 378
LM +Y
Sbjct: 452 SLMRSY 457
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 159/363 (43%), Gaps = 50/363 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI + K GN +A ++F+++ + +WNA+I A + P +AL+ M E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T + +L + + ++ L G+++H +K + + ++L+ Y+KCG + S
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT------RQRADTVTLTRMLCVC 258
FD + KN++ W A++ +G+ N+ + S+ L R T + C
Sbjct: 374 FDYIRDKNIVCWNALL-----SGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA---------------- 302
EL +++H ++++G+ YV + L+ Y + ++A
Sbjct: 429 TEL------QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 303 KLVFGAVPDKG----------------SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
+V G +G +++W I A +++ E I+LF M+ +
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH-CTFMVQLLTRYGKLDEAQR 405
P+ +TF ++LS+C + + L++ + + C ++ + + G + +
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK 602
Query: 406 FLE 408
E
Sbjct: 603 VFE 605
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 9/278 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I L+ K G V LA +VF++ P R+ ++N +I G + G +A M G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T+ +L CA L ++ G ++H +LK F+ + + L+ +Y + ++ + +
Sbjct: 113 PNQSTVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F+ M K++ W M+ GFL E + R +L R A ++T + L V +
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR--ELVRMGA-SLTESSFLGVLKGVSC 227
Query: 264 VK---LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
VK + K++H K G V LI+ YG CG A+ +F ++W A+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
I A E +A+ LF M +G SPN T+ +VL +
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 153 ILPICAKLRTLKQGKEVHAYALK--RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
+L +C K + + K +HA ++ L V + ++++ +Y K G + + ++FD M +
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
+N + + +I + G +++A V M+ + T++ +L C L V+ G ++
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQL 135
Query: 271 HGQVLKLG-FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEW 329
HG LK G F + +V L+ +YG + + A+ VF +P K TW ++ G++ +
Sbjct: 136 HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGF 195
Query: 330 YREAIDLFDLMMSNGCSPNTFTFEAVL 356
+E + F ++ G S +F VL
Sbjct: 196 LKECMFFFRELVRMGASLTESSFLGVL 222
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 156/349 (44%), Gaps = 33/349 (9%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRPNWITMMVIL 154
++D A ++F + +V +N++I HN + + Y +L+ + + P+ T +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
CA L + GK+VH + K HV ++L+ MY K + + ++FD M +++VI
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 215 LW-------------------------------TAMIDSCVENGFLNEALAVMRSMQLTR 243
W TAMI G EA+ R MQL
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 244 QRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAK 303
D ++L +L C +L ++LGK +H + GF V LI MY CGV A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 304 LVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
+FG + K ++W+ +I Y Y AI+ F+ M PN TF +LS C G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 364 FVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
++ R+FD+M Y+IE EH ++ +L R GKL+ A + P
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 101/177 (57%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + + G + A+ +F +++ +W AMISG G EA+++ R M G
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ I+++ +LP CA+L +L+ GK +H YA +R FL + ++L+ MYSKCGVI +I+L
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
F ME K+VI W+ MI +G + A+ MQ + + + +T +L C +
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 36/247 (14%)
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
+P ++++ + K+++A + MV+ ++ K + Y+ RLF+ + NV
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQR---ADTVTLTRMLCVCGELRRVKLGKEV 270
L+ ++I + N + + + + QL R+ D T M C L LGK+V
Sbjct: 74 FLYNSIIRAYTHNSLYCDVIRIYK--QLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 271 HGQVLKLG--------------------FASVHYVAAE-----------LINMYGACGVF 299
HG + K G H V E L++ Y G
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 300 DNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
AK +F + DK ++WTA+I Y Y EA+D F M G P+ + +VL C
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSC 251
Query: 360 DRAGFVE 366
+ G +E
Sbjct: 252 AQLGSLE 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI+++ K G + A Q+F + + V +W+ MISG A++G A+E M +
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR---RFLPHVTMVSSLMVMYSKCGVIGYS 201
PN IT + +L C+ + ++G + + + R + P + L+ + ++ G + +
Sbjct: 340 PNGITFLGLLSACSHVGMWQEG--LRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERA 397
Query: 202 IRLFDGME-KKNVILWTAMIDSCVENGFLNEALAVM 236
+ + M K + +W +++ SC G L+ AL M
Sbjct: 398 VEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 157/332 (47%), Gaps = 6/332 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA--WNAMISGLAHNGFPREALEYVRLMLEEG 142
++LI + G + AR+VF+E P+ SV A ++ +++G AL+ R+M +
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQ-SVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
N T++ L + L L + H +K + ++++L+ MY K G I +
Sbjct: 223 VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSAR 282
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
R+FD +K+V+ W MID + G L E + ++R M+ + + ++ T +L C
Sbjct: 283 RIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSE 342
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
+G+ V + + A + L++MY G+ + A +F + DK +WTA+I
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMIS 402
Query: 323 AYGYKEWYREAIDLFDLMMSNGCS--PNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYE 379
YG REA+ LF+ M C PN TF VL+ C G V + R F M Y
Sbjct: 403 GYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYS 462
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH +V LL R G+L+EA + P
Sbjct: 463 FTPKVEHYGCVVDLLGRAGQLEEAYELIRNLP 494
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 15/316 (4%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILP 155
++ A +FE ++ +N MI G + + P A + +G + + + L
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 156 ICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
C++ + G+ +H AL+ F+ + ++L+ Y CG I + ++FD M +
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS---- 189
Query: 216 WTAMIDSCVENGFLNE-----ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
A+ S + NG+L AL + R M+ + + TL L +L + +
Sbjct: 190 VDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESA 249
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
H +K+G ++ LI MYG G +A+ +F K +TW +I Y
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF---RFFDLMSTYEIEASKEHC 387
E + L M PN+ TF +LS C + E AF DL+ I
Sbjct: 310 EECVWLLRQMKYEKMKPNSSTFVGLLSSC---AYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 388 TFMVQLLTRYGKLDEA 403
T +V + + G L++A
Sbjct: 367 TALVDMYAKVGLLEKA 382
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 19/254 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G + AR++F+ + R+ V WN MI A G E + +R M E +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T + +L CA G+ V + R + ++L+ MY+K G++ ++ +
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT--RQRADTVTLTRMLCVCGE-- 260
F+ M+ K+V WTAMI +G EA+ + M+ + R + +T +L C
Sbjct: 386 FNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGG 445
Query: 261 -----LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGS 314
+R K E + K+ HY ++++ G G + A + +P S
Sbjct: 446 LVMEGIRCFKRMVEAYSFTPKVE----HY--GCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 315 MTWTALI---RAYG 325
W AL+ R YG
Sbjct: 500 TAWRALLAACRVYG 513
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K N R+VF+E R+V W +ISG A N E L M EG +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T L + A+ +G +VH +K + + +SL+ +Y KCG + + L
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD E K+V+ W +MI NG EAL + SM+L R + ++ +C L+ +
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWTALIRA 323
+ +++H V+K GF + L+ Y C +A +F + G+ ++WTA+I
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+ + EA+DLF M G PN FT+ +L+
Sbjct: 372 FLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI L+ K GNV AR +F+++ +SV WN+MISG A NG EAL M R
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + ++ +CA L+ L+ +++H +K FL + ++LMV YSKC + ++RL
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 205 FDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
F + NV+ WTAMI ++N EA+ + M+ R + T + +L
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----P 408
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
V EVH QV+K + V L++ Y G + A VF + DK + W+A++
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
Y AI +F + G PN FTF ++L++C
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 153/307 (49%), Gaps = 12/307 (3%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL---PICAKLRTLKQGK 167
+V +W AMISG N EA++ M +G RPN T VIL P+ +
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP-------S 413
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
EVHA +K + T+ ++L+ Y K G + + ++F G++ K+++ W+AM+ + G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR-RVKLGKEVHGQVLKLGFASVHYVA 286
A+ + + + + T + +L VC + GK+ HG +K S V+
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
+ L+ MY G ++A+ VF +K ++W ++I Y +A+D+F M
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
+ TF V + C AG VE+ ++FD+M +I +KEH + MV L +R G+L++A +
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 406 FLEMSPS 412
+E P+
Sbjct: 654 VIENMPN 660
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 3/242 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + K G V+ A +VF + + AW+AM++G A G A++ + + G +
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 145 PNWITMMVILPICAKLR-TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN T IL +CA ++ QGK+ H +A+K R + + S+L+ MY+K G I +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F +K+++ W +MI ++G +AL V + M+ + + D VT + C
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 264 VKLGKEVHG-QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD-KGSMTWTALI 321
V+ G++ V A + ++++Y G + A V +P+ GS W ++
Sbjct: 612 VEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTIL 671
Query: 322 RA 323
A
Sbjct: 672 AA 673
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +F++SP R ++ +++ G + +G +EA + G + +L + A
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
L G+++H +K FL V++ +SL+ Y K ++FD M+++NV+ WT +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
I N +E L + MQ + ++ T L V E G +VH V+K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
V+ LIN+Y CG A+++F K +TW ++I Y EA+ +F
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 340 MMSNGCSPNTFTFEAVLSIC 359
M N + +F +V+ +C
Sbjct: 286 MRLNYVRLSESSFASVIKLC 305
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%)
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LFD ++ + +++ +G EA + ++ D + +L V L
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
G+++H Q +K GF V L++ Y F + + VF + ++ +TWT LI
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
Y E + LF M + G PN+FTF A L + G
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEG 208
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K+GN++ A +VF+ + + +WN+MISG A +G +AL+ + M + +
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +T + + C +++G++ ++ + P S ++ +YS+ G + +++
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 204 LFDGM-EKKNVILWTAMIDSC 223
+ + M +W ++ +C
Sbjct: 654 VIENMPNPAGSTIWRTILAAC 674
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+++ +RG +D A +FE PRR V +W AM+ GLA NG EA M E
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER--- 231
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLM---VMYSKCGVIGYS 201
N I+ ++ A+ + + ++ +R F TM++ + M CG
Sbjct: 232 -NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG----- 285
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGE 260
LFD M +KNVI WT MI VEN EAL V M + + + T +L C +
Sbjct: 286 --LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSD 343
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF--GAVPDKGSMTWT 318
L + G+++H + K V + L+NMY G A+ +F G V + ++W
Sbjct: 344 LAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMST 377
++I Y + +EAI++++ M +G P+ T+ +L C AG VE FF DL+
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 378 YEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
+ +EH T +V L R G+L + F+
Sbjct: 464 ESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 161/330 (48%), Gaps = 26/330 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+ +I + K G++ AR++F+ R++V W AM+SG + + L ++ +E
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRS----KQLSIAEMLFQEMP 136
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
N ++ ++ A+ + + E+ +R + +MV +L+ + G I ++
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV----QRGRIDEAMN 192
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+ M +++V+ WTAM+D +NG ++EA + M + ++ M+ + R
Sbjct: 193 LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNR 248
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELI---NMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
+ ++ + + FAS + + I M ACG+FD +P+K ++WT +
Sbjct: 249 IDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDR-------MPEKNVISWTTM 301
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGC-SPNTFTFEAVLSIC-DRAGFVEDAFRFFDLMSTY 378
I Y + EA+++F M+ +G PN T+ ++LS C D AG VE + L+S
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE-GQQIHQLISKS 360
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ ++ + ++ + ++ G+L A++ +
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 17/233 (7%)
Query: 180 PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM 239
P V L+ K G I + +LFDG+ +++V+ WT +I ++ G + EA + +
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV 103
Query: 240 QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA-AELINMYGACGV 298
R + VT T M V G LR +L ++L + V+ +I+ Y G
Sbjct: 104 D---SRKNVVTWTAM--VSGYLRSKQLSI---AEMLFQEMPERNVVSWNTMIDGYAQSGR 155
Query: 299 FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
D A +F +P++ ++W ++++A + EA++LF+ M + ++ A++
Sbjct: 156 IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDG 211
Query: 359 CDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ G V++A R FD M I + M+ + ++DEA + ++ P
Sbjct: 212 LAKNGKVDEARRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMP 260
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 34/351 (9%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G+VD A + + WN +I G +++ P +++ ML G P+ +T ++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 155 PICAKLRTLKQGKEVHAYALKRRF-----------------------------LPHVTMV 185
++L K G +H +K +PH +V
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 186 S--SLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM-RSMQLT 242
+ S++ Y+K G + + +FD M +++V+ W++MID V+ G N+AL + + M++
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 243 RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA 302
+A+ VT+ ++C C L + GK VH +L + + LI+MY CG +A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 303 KLVF--GAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICD 360
VF +V + ++ W A+I + RE++ LF M + P+ TF +L+ C
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 361 RAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
G V++A+ FF + E EH MV +L+R G + +A F+ P
Sbjct: 356 HGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP 406
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 9/238 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-K 143
+S++ + K G+V AR VF+E R V W++MI G G +ALE M+ G
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ N +TM+ ++ CA L L +GK VH Y L V + +SL+ MY+KCG IG +
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 204 LF--DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+F +++ + ++W A+I +GF+ E+L + M+ ++ D +T +L C
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHG 357
Query: 262 RRVKLGKEVHGQVLKLGF--ASVHYVAAELINMYGACGVFDNAKLVFGAVPDK--GSM 315
VK + + G S HY A ++++ G+ +A +P K GSM
Sbjct: 358 GLVKEAWHFFKSLKESGAEPKSEHY--ACMVDVLSRAGLVKDAHDFISEMPIKPTGSM 413
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 155/304 (50%), Gaps = 6/304 (1%)
Query: 107 SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK-RPNWITMMVILPICAKLRTLKQ 165
S R +++WN++ISG A +G E+L + M EGK R + IT++ + L + Q
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 166 GKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVE 225
G+ H A+K + ++L+ MY +C I ++++F + N+ W +I + +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 226 NGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
N E + R+++L + +T +L +L G + H +++ GF + +V
Sbjct: 660 NKAGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 286 AAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG- 344
+A L++MY +CG+ + VF W ++I A+G+ +A++LF + SN
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 345 CSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEA 403
PN +F ++LS C +GF+++ ++ M + ++ EH ++V +L R GKL EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 404 QRFL 407
F+
Sbjct: 837 YEFI 840
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 151/284 (53%), Gaps = 6/284 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K N+ A VF R + +WN +++ NG PR++L+Y + M G+
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLP--HVTMVSSLMVMYSKCGVIGYSI 202
+ +T ++ C+ + L G+ +H +K + P HV++ +S++ MYSKCG +
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGEL 261
+F+ + ++VI A+++ NG EA ++ MQ + + + D T+ + +CG+L
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 262 RRVKLGKEVHGQVLKLGFAS-VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
+ G+ VHG +++ S V +I+MYG CG+ A+L+F + ++W ++
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 321 IRAYGYKEWYREAIDLFDLMMSN-GCSPNTF-TFEAVLSICDRA 362
I A+ + +A +LF ++S CS + T A+L+ CD +
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 143/287 (49%), Gaps = 3/287 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S L+ + + G + + +F+E + V WN+MI+ L NG A+ M+ +G
Sbjct: 126 SKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNE 185
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T+++ + L ++ +H A++ + ++ ++LM +Y+K + + +
Sbjct: 186 FDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECV 245
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F ME ++++ W ++ C+ NG ++L +SM + Q ADTVT + ++ C + +
Sbjct: 246 FTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEEL 305
Query: 265 KLGKEVHGQVLKLGFASVHYVAA--ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
LG+ +HG V+K G++ +V+ +I+MY CG + A+ VF + + ++ A++
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 323 AYGYKEWYREAIDLFDLMMS-NGCSPNTFTFEAVLSICDRAGFVEDA 368
+ + EA + + M S + P+ T ++ SIC F +
Sbjct: 366 GFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 24/282 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE--G 142
+S+I ++ K G A +F+ + R + +WN+MIS + NGF +A + ++ E
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ + T++ IL C +L GK VH + K + L + +
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK---------LGDLTSAF---------L 534
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGEL 261
RL E +++ W ++I C +G E+L ++M + + R D +TL + G L
Sbjct: 535 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 594
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
V G+ HG +K + LI MYG C ++A VFG + D +W +I
Sbjct: 595 GLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVI 654
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
A + RE LF + PN TF +LS + G
Sbjct: 655 SALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLG 693
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVR-LMLEEGK 143
++LI ++ + +++ A +VF ++ +WN +IS L+ N RE + R L LE
Sbjct: 620 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE--- 676
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN IT + +L +L + G + H + ++R F + + ++L+ MYS CG++ ++
Sbjct: 677 -PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELR 262
+F ++ W ++I + +G +A+ + + + + + + +L C
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 263 RVKLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTAL 320
+ G + Q+ K G V +++M G G A + + G + + W AL
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 321 IRAYGY 326
+ A Y
Sbjct: 856 LSACNY 861
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 2/244 (0%)
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
+ VH +ALK L + S L+ Y + G + S LFD +++K+VI+W +MI + +N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
G A+ + M D+ TL L + +H ++ G +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
L+N+Y +A+ VF + + ++W ++ R+++ F M +G
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 347 PNTFTFEAVLSICDRAG--FVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
+T TF V+S C + ++ + S Y EA ++ + ++ G + A+
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 405 RFLE 408
E
Sbjct: 347 TVFE 350
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 44/363 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPR-RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+++I + + G++D A VF +P +WN +I+G A NG+ EAL+ M E G
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL 256
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG------- 196
+ + + +L + + L++LK GKEVHA LK + + S ++ +Y KCG
Sbjct: 257 KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAES 316
Query: 197 ----------------VIGYSI--------RLFDGMEKKNVILWTAMIDSCVENGFLN-- 230
++GYS RLFD + +KN+++WTAM G+LN
Sbjct: 317 AHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMF-----LGYLNLR 371
Query: 231 ---EALAVMRSMQLTRQRA-DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
L + R+ D++ + +L C ++ GKE+HG L+ G +
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
++MY CG + A+ +F + ++ ++ + A+I + ++ F+ M G
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
P+ TF A+LS C G V + ++F ++ Y I H T M+ L + +LD+A
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 406 FLE 408
+E
Sbjct: 552 LME 554
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 166/397 (41%), Gaps = 71/397 (17%)
Query: 85 SSLIQLHFKRGNVDLARQVFE-ESPRRSVSAWNAMISGLAH-NGFPREALEYVRLMLEEG 142
+++I + K NV AR++FE ++ R + +N ++SG A +G EA+E M +
Sbjct: 58 NAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 143 KRPNWI---TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
K WI T+ ++ + AKL + G+++H +K VSSL+ MYSKCG
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFK 177
Query: 200 YSIRLFDGM----------------------------------EKKNVILWTAMIDSCVE 225
+F+G E + I W +I +
Sbjct: 178 EVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQ 237
Query: 226 NGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
NG+ EAL + SM+ + D + +L V L+ +K+GKEVH +VLK G S +V
Sbjct: 238 NGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFV 297
Query: 286 AAELINMYGACGV------------FDN-------------------AKLVFGAVPDKGS 314
++ ++++Y CG F N AK +F ++ +K
Sbjct: 298 SSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNL 357
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGC-SPNTFTFEAVLSICDRAGFVEDAFRFFD 373
+ WTA+ Y ++L ++N +P++ +VL C ++E
Sbjct: 358 VVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHG 417
Query: 374 LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMS 410
I K+ T V + ++ G ++ A+R + S
Sbjct: 418 HSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSS 454
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 155/328 (47%), Gaps = 1/328 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI +FK G R VF+ R+V A+ISGL N + L LM
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH 253
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T + L C+ + + +G+++HA K + + S+LM MYSKCG I + +
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ + + + T ++ +NG EA+ M D ++ +L V +
Sbjct: 314 FESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSL 373
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
LGK++H V+K F+ +V LINMY CG +++ VF +P + ++W ++I A+
Sbjct: 374 GLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
A+ L++ M + P TF ++L C G ++ + M + IE
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH T ++ +L R G L EA+ F++ P
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLP 521
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 9/331 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ L+ K G + A ++F+E P R V + N + G N ++ ML G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T+ ++L +C K +HA A+ + +++ + L+ Y KCG +
Sbjct: 154 DH-ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FDGM +NVI TA+I +EN + L + M+ ++VT L C +R+
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
G+++H + K G S + + L++MY CG ++A +F + + ++ T ++
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
EAI F M+ G + AVL + F++++ + + I+
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGV----SFIDNSLGLGKQLHSLVIKRKF 388
Query: 385 EHCTF----MVQLLTRYGKLDEAQRFLEMSP 411
TF ++ + ++ G L ++Q P
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMP 419
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +VFE + + WN MIS + A+ + M G +P+ T +L
Sbjct: 342 AHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD 401
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
L L+ V A +K + + ++L+ YSK G I + LF+ +KN+I W A+
Sbjct: 402 LDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAI 458
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQR--ADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
I NGF E L + + R D TL+ +L +C + LG + H VL+
Sbjct: 459 ISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH 518
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G + LINMY CG N+ VF + +K ++W +LI AY A++ +
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTY 578
Query: 338 DLMMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE-IEASKEHCTFMVQLLT 395
M G P+ TF AVLS C AG VE+ F+ M + + + +H + +V LL
Sbjct: 579 KTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLG 638
Query: 396 RYGKLDEAQRFLEMS 410
R G LDEA+ +++S
Sbjct: 639 RAGHLDEAESLVKIS 653
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 163/335 (48%), Gaps = 23/335 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRS-VSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++L+ FK G+++ A +VF++ P R V+ WNAMI+G +G+ ++E R M + G
Sbjct: 127 TTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
R + IL +C +L GK+VH+ +K F ++V++L+ MY C V+ +
Sbjct: 187 RHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL 245
Query: 204 LFDGMEK--KNVILWTAMIDSCVENGF-LNEALAVMRSMQLTRQRADTVTLTRML--CVC 258
+F+ + ++ + + +ID GF +E+L V R M R +T ++ C C
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC 303
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
+G +VHG +K G+ V+ + MY + F A VF ++ +K +TW
Sbjct: 304 A-----AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWN 358
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC---DRAGFVEDAFRFFDLM 375
+I +Y + + A+ ++ M G P+ FTF ++L+ D V+ F L
Sbjct: 359 TMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLS 418
Query: 376 STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMS 410
S EI + ++ ++ G++++A E S
Sbjct: 419 SKIEISNA------LISAYSKNGQIEKADLLFERS 447
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++LI + K G ++ A +FE S R+++ +WNA+ISG HNGFP E LE +LE
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 144 R--PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
R P+ T+ +L IC +L G + HAY L+ + ++L+ MYS+CG I S
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGE 260
+ +F+ M +K+V+ W ++I + +G A+ ++MQ + D T + +L C
Sbjct: 544 LEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Query: 261 LRRVKLGKEV-------HGQVLKLGFASVHYVAAELINMYGACGVFDNAK 303
V+ G E+ HG + + S L+++ G G D A+
Sbjct: 604 AGLVEEGLEIFNSMVEFHGVIRNVDHFSC------LVDLLGRAGHLDEAE 647
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 116 NAMISGLAHNGFPREALE-YVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
N ++GL +G R AL+ + + RP+ ++ + + LR G +VH YA+
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 175 KRRFLPHVTMVSSLMVMYS-------------------------------KCGVIGYSIR 203
+ L H + ++L+ +Y K G I Y+
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 204 LFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+FD M E+ +V +W AMI C E+G+ ++ + R M R D +L +C +
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYG 203
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF--GAVPDKGSMTWTAL 320
+ GK+VH V+K GF V LI MY C V +A LVF V + +T+ +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 321 IRAY-GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
I G+K E++ +F M+ P TF +V+ C A
Sbjct: 264 IDGLAGFKR--DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA 305
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 172/353 (48%), Gaps = 32/353 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI ++ K G V AR+VF+E P R+V+ WNAMI G NG +A+ L E
Sbjct: 85 SSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAVLASGLFEEISVC 141
Query: 145 PNWITMMVILPICAKLRTLKQGKE-----------VHAYAL-------------KRRFLP 180
N +T + ++ K +++ +E V A+++ R+F
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 181 HV----TMVSSLMVM-YSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
+ V SLM+ Y + G + + +F + +++++W +I +NG+ ++A+
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 236 MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
+MQ D VT++ +L C + R+ +G+EVH + G +V+ LI+MY
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAK 321
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
CG +NA VF ++ + ++I +EA+++F M S P+ TF AV
Sbjct: 322 CGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAV 381
Query: 356 LSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
L+ C GF+ + + F M T +++ + +H ++ LL R GKL EA R ++
Sbjct: 382 LTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVK 434
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 33/293 (11%)
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P W+ +++ C R + GK +H+ ++K V + SSL+ MY KCG + + ++
Sbjct: 45 PGWVPLILRACACVVPRVV-LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKV 103
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG----- 259
FD M ++NV W AMI + NG A + + + R +TVT M+ G
Sbjct: 104 FDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR---NTVTWIEMIKGYGKRIEI 160
Query: 260 ------------ELRRVK-----LGKEVHGQVLKLG---FASV----HYVAAELINMYGA 295
EL+ VK LG V+ + ++ F + +V + +++ Y
Sbjct: 161 EKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFR 220
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
G A+ +F V + + W LI Y + +AID F M G P+ T ++
Sbjct: 221 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 356 LSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
LS C ++G ++ L++ IE ++ ++ + + G L+ A E
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
V L C C + RV LGK +H + +K G S V + LI+MYG CG +A+ VF
Sbjct: 48 VPLILRACAC-VVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDE 106
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA 368
+P++ TW A+I Y A LF+ + NT T+ ++ + +E A
Sbjct: 107 MPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEIEKA 163
Query: 369 FRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
F+ M +E++ K + M+ + K+++A++F E P
Sbjct: 164 RELFERM-PFELKNVKA-WSVMLGVYVNNRKMEDARKFFEDIP 204
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G+++ A VFE RSV+ N+MIS LA +G +EALE M +
Sbjct: 313 NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLK 372
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IT + +L C L +G ++ + + P+V L+ + + G + + RL
Sbjct: 373 PDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRL 432
Query: 205 FDGME-KKNVILWTAMIDSC 223
M K N + A++ +C
Sbjct: 433 VKEMHVKPNDTVLGALLGAC 452
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 167/330 (50%), Gaps = 5/330 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGK 143
++L+ ++ G++ A VF ++ +WN++ISG + NGF +A L Y RL+
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RP+ T + A+ GK +H K + V + ++L+ MY K + +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLCVCGEL 261
+FD M++++V+LWT MI G N LAV +++ R+ R+D +L+ ++ C ++
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLG--NSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++ G+ H ++ GF V V L++MYG G ++ A+ +F + W +++
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSML 576
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
AY +A+ F+ ++ NG P+ T+ ++L+ C G ++ M I+
Sbjct: 577 GAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
A +H + MV L+++ G +DEA +E SP
Sbjct: 637 AGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 152/329 (46%), Gaps = 1/329 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ ++ G+++ AR++F+ R AWN MI G N + L + R ML G
Sbjct: 238 TSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD 297
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P T ++L C+KL + GK +HA + L + + ++L+ MY CG + + +
Sbjct: 298 PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYV 357
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRS-MQLTRQRADTVTLTRMLCVCGELRR 263
F + N++ W ++I C ENGF +A+ + R ++++ R D T + + E R
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
GK +HGQV KLG+ +V L++MY ++A+ VF + ++ + WT +I
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
+ A+ F M + F+ +V+ C + F L +
Sbjct: 478 HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
C +V + + GK + A+ ++ +
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASN 566
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 142/275 (51%), Gaps = 2/275 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHN-GFPREALEYVRLMLEEGK 143
++LI ++ + G+++ AR+VF++ P R+V ++NA+ S + N F A M E
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+PN T ++ +CA L + G +++ +K + +V + +S++ MYS CG + + R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD + ++ + W MI ++N + + L R+M ++ T + +L C +L
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
LGK +H +++ + + L++MY +CG A VFG + + ++W ++I
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 324 YGYKEWYREAIDLF-DLMMSNGCSPNTFTFEAVLS 357
+ +A+ ++ L+ + P+ +TF A +S
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 144/301 (47%), Gaps = 34/301 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRL---MLEE 141
++LI ++ + +++ AR+VF++ P+R++ + GL+ EYV + + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNI----VTLFGLS------AVFEYVSMGSSLHSQ 75
Query: 142 GKRPNWITMMVILPI-------------CAKLRTLKQGKEVHAYALKRRF-----LPHVT 183
+ M+ +P+ C + LK+ +++HA L P+
Sbjct: 76 IIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135
Query: 184 MVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN-GFLNEALAVMRSMQLT 242
++L+ MY +CG + + ++FD M +NV+ + A+ + N F + A + M
Sbjct: 136 --NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFE 193
Query: 243 RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA 302
+ ++ T T ++ VC L V +G ++ Q++KLG++ V ++ MY +CG ++A
Sbjct: 194 YVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESA 253
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
+ +F V ++ ++ W +I + + + F M+ +G P FT+ VL+ C +
Sbjct: 254 RRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKL 313
Query: 363 G 363
G
Sbjct: 314 G 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 186 SSLMVMYSKCGVIGYSIRLFDGMEKKNVIL---WTAMIDSCVENGFLNEALAVMRSMQ-- 240
++L+ MY +C + + ++FD M ++N++ +A+ + L+ + + S Q
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 241 ----LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH---YVAAELINMY 293
L + V LTR C + +K +++H VL G + Y LI+MY
Sbjct: 86 FFMPLNEIASSVVELTRK---CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK-EWYREAIDLFDLMMSNGCSPNTFTF 352
CG + A+ VF +P + +++ AL AY ++ A L M PN+ TF
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 353 EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRY---GKLDEAQRFLE 408
+++ +C +ED L S ++ +L Y G L+ A+R +
Sbjct: 203 TSLVQVC---AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD 258
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 1/310 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +VF +V +W +I GL +GF ++ + M++ PN +T+ +L C+K
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
LR +++ E+HAY L+R + + +SL+ Y+ + Y+ + M++++ I +T++
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
+ E G AL+V+ M R D ++L + L ++ GK +H +K GF
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDL 339
+ V L++MY CG ++AK VF + ++W L+ + A+ F+
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYG 398
M P++ TF +LS C + +F +M Y IE EH +V +L R G
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 399 KLDEAQRFLE 408
+L+EA +E
Sbjct: 680 RLEEATGVVE 689
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ L+ K + AR++F+E R+V AW MIS + AL M+ G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T ++ CA LR + G VH +K F + + SSL +YSKCG + L
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F ++ + I WT MI S V EAL M + T ++L L +
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GL 240
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ GK +H ++ G + L++ Y ++A V + ++ WT+++ +
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGF 300
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+EA+ F M S G PN FT+ A+LS+C
Sbjct: 301 VRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSL L+ K G A ++F +W MIS L REAL++ M++ G
Sbjct: 163 SSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP 222
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T + +L + L L+ GK +H+ + R +V + +SL+ YS+ + ++R+
Sbjct: 223 PNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ +++V LWT+++ V N EA+ M+ + + T + +L +C +R +
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFD-NAKLVFGAVPDKGSMTWTALIRA 323
GK++H Q +K+GF V L++MY C + A VFGA+ ++WT LI
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDR 361
+ ++ L M+ PN T VL C +
Sbjct: 402 LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 4/259 (1%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
IL C + + G +H +K L ++ + ++L+ +Y K I + +LFD M +
Sbjct: 30 ILSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V WT MI + ++ AL++ M + + T + ++ C LR + G VHG
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA-YGYKEWYR 331
V+K GF V + L ++Y CG F A +F ++ + +++WT +I + G ++W R
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW-R 207
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMV 391
EA+ + M+ G PN FTF +L G +E + I + T +V
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 392 QLLTRYGKLDEAQRFLEMS 410
+++ K+++A R L S
Sbjct: 267 DFYSQFSKMEDAVRVLNSS 285
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 41/330 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ + G ++AR+V + P R +WN+++S G EA R + +E +
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA----RALFDEMEE 234
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N V ++ M+S Y+ G++ + +
Sbjct: 235 RN----------------------VESWNF---------MISG----YAAAGLVKEAKEV 259
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
FD M ++V+ W AM+ + G NE L V M + ++ D TL +L C L
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ G+ VH + K G ++A L++MY CG D A VF A + TW ++I
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISD 379
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEA 382
++A+++F M+ G PN TF VLS C+ G ++ A + F++MS+ Y +E
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
+ EH MV LL R GK++EA+ + P+
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 7/242 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-KRP 145
+I + G V A++VF+ P R V +WNAM++ AH G E LE ML++ ++P
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+ T++ +L CA L +L QG+ VH Y K + ++L+ MYSKCG I ++ +F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC---GELR 262
K++V W ++I +G +AL + M + + +T +L C G L
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLD 422
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALI 321
+ + E+ V ++ HY ++++ G G + A+ + +P D+ S+ +L+
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGC--MVDLLGRMGKIEEAEELVNEIPADEASILLESLL 480
Query: 322 RA 323
A
Sbjct: 481 GA 482
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 40/289 (13%)
Query: 116 NAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALK 175
N++I A++ P AL R ML P+ + +L CA ++G+++H +K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 176 RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV 235
+ V + ++L+ +Y + G + ++ D M ++ + W +++ + +E G ++EA A+
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 236 MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
M E R V+ S ++ +I+ Y A
Sbjct: 229 FDEM--------------------EERNVE---------------SWNF----MISGYAA 249
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS-PNTFTFEA 354
G+ AK VF ++P + ++W A++ AY + Y E +++F+ M+ + P+ FT +
Sbjct: 250 AGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 355 VLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
VLS C G + + + IE T +V + ++ GK+D+A
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG----VIGYSIRL 204
T + IL + ++L + ++ HA+ LK H T +S +V ++ + Y+ +
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLF-HDTFSASKLVAFAATNPEPKTVSYAHSI 96
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ + N ++I + + AL V R M L D + T +L C
Sbjct: 97 LNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 156
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+ G+++HG +K G + +V L+N+YG G F+ A+ V +P + +++W +L+ AY
Sbjct: 157 EEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAY 216
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
K EA LFD M N ++ ++S AG V++A FD M ++
Sbjct: 217 LEKGLVDEARALFDEMEER----NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G +D A +VF + +R VS WN++IS L+ +G ++ALE M+ EG +
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 145 PNWITMMVILPICAKLRTLKQGKEV-HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN IT + +L C + L Q +++ + R P + ++ + + G I +
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 204 LFDGMEKKNV-ILWTAMIDSCVENGFLNEA 232
L + + IL +++ +C G L +A
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQA 492
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 161/332 (48%), Gaps = 5/332 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+++I + G+V A++VF+ + + +WN+MI+G + + A E M
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK--CGVIGYS 201
+ T +L C+ GK +H +K+ + ++L+ MY + G + +
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+ LF+ ++ K++I W ++I + G +A+ ++ + + D + +L C +L
Sbjct: 362 LSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDL 421
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWTAL 320
++LG+++H K GF S +V + LI MY CG+ ++A+ F + K S + W A+
Sbjct: 422 ATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYE 379
I Y + ++DLF M + + TF A+L+ C G +++ +LM Y+
Sbjct: 482 ILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYK 541
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
I+ EH V LL R G +++A+ +E P
Sbjct: 542 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ + K G + A +F+E P+R +WN MISG G +A M G +
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+ +L A ++ G++VH +K + +V + SSL+ MY+KC + + F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVK 265
+ + N + W A+I V+ + A ++ M++ D T +L + +
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCN 220
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF-GAVPDKGSMTWTALIRAY 324
L K+VH +VLKLG + +I+ Y CG +AK VF G K ++W ++I +
Sbjct: 221 LLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGF 280
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
E A +LF M + + +T+ +LS C
Sbjct: 281 SKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 32/320 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM------ 138
SSL+ ++ K V+ A + F+E + +WNA+I+G + A + LM
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 139 -LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGV 197
++ G +T++ C L K+VHA LK +T+ ++++ Y+ CG
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLL------KQVHAKVLKLGLQHEITICNAMISSYADCGS 253
Query: 198 IGYSIRLFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ + R+FDG+ K++I W +MI ++ A + MQ D T T +L
Sbjct: 254 VSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLS 313
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY--GACGVFDNAKLVFGAVPDKGS 314
C GK +HG V+K G V LI+MY G ++A +F ++ K
Sbjct: 314 ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDL 373
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICD-------------- 360
++W ++I + K +A+ F + S+ + + F A+L C
Sbjct: 374 ISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHAL 433
Query: 361 --RAGFVEDAFRFFDLMSTY 378
++GFV + F L+ Y
Sbjct: 434 ATKSGFVSNEFVISSLIVMY 453
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGF 228
H YA+K + + + + ++ Y K G +GY+ LFD M K++ + W MI G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
L +A + M+ + D + +R+L ++R LG++VHG V+K G+ YV +
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM-MSNGCSP 347
L++MY C ++A F + + S++W ALI + + A L LM M +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 348 NTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
+ TF +L++ D F + + ++ C M+ G + +A+R
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 408 E 408
+
Sbjct: 262 D 262
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFE--ESPRRSVSAWNAMISGLAHNGFPREALEYVRLML 139
N + L+ ++ + + A +FE E + +V+ W +M++G + NGF +A+E R +
Sbjct: 161 NVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVT-WTSMLTGYSQNGFAFKAIECFRDLR 219
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
EG + N T +L CA + + G +VH +K F ++ + S+L+ MY+KC +
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML-CVC 258
+ L +GME +V+ W +MI CV G + EAL++ M + D T+ +L C
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA 339
Query: 259 GELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWT 318
+K+ H ++K G+A+ V L++MY G+ D+A VF + +K ++WT
Sbjct: 340 LSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWT 399
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
AL+ + Y EA+ LF M G +P+ +VLS
Sbjct: 400 ALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 151/325 (46%), Gaps = 37/325 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI ++ K ++ AR + E V +WN+MI G G EAL M E +
Sbjct: 266 SALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMK 325
Query: 145 PNWITMMVILPICAKLRT-LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ T+ IL A RT +K H +K + + + ++L+ MY+K G++ +++
Sbjct: 326 IDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALK 385
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F+GM +K+VI WTA++ NG +EAL + +M++ D + +L EL
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G++VHG +K GF S V L+ MY CG ++A ++F ++ + +TWT LI
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEA 382
Y + G +EDA R+FD M T Y I
Sbjct: 506 YA-----------------------------------KNGLLEDAQRYFDSMRTVYGITP 530
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFL 407
EH M+ L R G + ++ L
Sbjct: 531 GPEHYACMIDLFGRSGDFVKVEQLL 555
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 136/259 (52%), Gaps = 1/259 (0%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A ++F +P ++ +WNA+ISG +G EA M +G +PN T+ +L +C
Sbjct: 78 AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTS 137
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME-KKNVILWTA 218
L L +G+++H + +K F V +V+ L+ MY++C I + LF+ ME +KN + WT+
Sbjct: 138 LVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTS 197
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG 278
M+ +NGF +A+ R ++ +++ T +L C + ++G +VH ++K G
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG 257
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
F + YV + LI+MY C ++A+ + + ++W ++I + EA+ +F
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 339 LMMSNGCSPNTFTFEAVLS 357
M + FT ++L+
Sbjct: 318 RMHERDMKIDDFTIPSILN 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Query: 186 SSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR 245
++++V YS + + +LF KN I W A+I ++G EA + MQ +
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 246 ADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLV 305
+ TL +L +C L + G+++HG +K GF V L+ MY C A+ +
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 306 FGAVP-DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
F + +K ++TWT+++ Y + +AI+ F + G N +TF +VL+ C
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 156/345 (45%), Gaps = 35/345 (10%)
Query: 102 QVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLR 161
Q +S + +W + I+ L NG EA + M G PN IT + +L C
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 162 TLKQ--GKEVHAYALKRRF-LPHVTMVSSLMVMYSKCG---------------------- 196
+ + G +H YA K HV + ++++ MYSK G
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 197 -VIGY--------SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRAD 247
+ GY + ++FD M ++++I WTAMI+ V+ G+ EAL R MQ++ + D
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 248 TVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFG 307
V + L C L + G VH VL F + V+ LI++Y CG + A+ VF
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 308 AVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
+ + ++W ++I + E++ F M G P+ TF L+ C G VE+
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 368 AFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
R+F +M Y I EH +V L +R G+L++A + ++ P
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP 370
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 122/232 (52%), Gaps = 7/232 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I + + G VD A ++F++ P R + +W AMI+G G+ EAL + R M G +
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+++ ++ L C L L G VH Y L + F +V + +SL+ +Y +CG + ++ ++
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F MEK+ V+ W ++I NG +E+L R MQ + D VT T L C + V
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 265 KLGKEVHGQVLKLGFASV----HYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+ G + Q++K + HY L+++Y G ++A + ++P K
Sbjct: 324 EEGLR-YFQIMKCDYRISPRIEHY--GCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 6/308 (1%)
Query: 110 RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEV 169
R +WN+MI + +AL + M+ +G + + T+ +L L L G++
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQF 262
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGY---SIRLFDGMEKKNVILWTAMIDSCVEN 226
H +K F + + S L+ YSKCG S ++F + ++++W MI N
Sbjct: 263 HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMN 322
Query: 227 GFLNE-ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY- 284
L+E A+ R MQ R D + + C L K++HG +K S
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG 344
V LI++Y G +A+ VF +P+ ++++ +I+ Y EA+ L+ M+ +G
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 345 CSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEA 403
+PN TF AVLS C G V++ +F+ M T++IE EH + M+ LL R GKL+EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 404 QRFLEMSP 411
+RF++ P
Sbjct: 503 ERFIDAMP 510
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 157/334 (47%), Gaps = 10/334 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
+++ + K + +ARQ+F+E P+ ++N +ISG A A+ + M + G +
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 147 WITMM-VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
T+ +I C ++ +KQ +H +++ F + ++ ++ + YSK G++ ++ +F
Sbjct: 140 GFTLSGLIAACCDRVDLIKQ---LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 206 DGMEK-KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
GM++ ++ + W +MI + ++ +ALA+ + M + D TL +L L +
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFD---NAKLVFGAVPDKGSMTWTALI 321
G++ HG+++K GF +V + LI+ Y CG D +++ VF + + W +I
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 322 RAYGY-KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
Y +E EA+ F M G P+ +F V S C + L I
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376
Query: 381 EASKEHC-TFMVQLLTRYGKLDEAQRFLEMSPSL 413
+++ ++ L + G L +A+ + P L
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI L++K GN+ AR VF+ P + ++N MI G A +G EAL + ML+ G
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL--PHVTMVSSLMVMYSKCGVIGYSI 202
PN IT + +L CA + +G+E + +K F P S ++ + + G + +
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQE-YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 203 RLFDGME-KKNVILWTAMIDSCVENGFLNEALA 234
R D M K + W A++ +C ++ N ALA
Sbjct: 504 RFIDAMPYKPGSVAWAALLGACRKHK--NMALA 534
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI 220
R L GK +HA +K + + + +YSKCG + Y+ F E+ NV + ++
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 221 DSCVENGFLN-------------------------------EALAVMRSMQLTRQRADTV 249
+ ++ ++ A+ + + M+ D
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
TL+ ++ C + RV L K++H + GF S V + Y G+ A VF +
Sbjct: 142 TLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 310 PD-KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+ + ++W ++I AYG + +A+ L+ M+ G + FT +VL+
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 2/321 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + + G + A +++ + + S+ +++S A G A+ Y + +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + ++ IL C K + G +H YA+K +V+ L+ MYSK + + L
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR-ADTVTLTRMLCVCGELRR 263
F+ +++ +I W ++I CV++G + A V M LT D +T+ +L C +L
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ LGKE+HG L+ F + ++V LI+MY CG A+ VF ++ + TW ++I
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA-FRFFDLMSTYEIEA 382
Y A+ + M G P+ TF VLS C+ GFV++ F ++ + I
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 383 SKEHCTFMVQLLTRYGKLDEA 403
+ +H MV LL R EA
Sbjct: 585 TLQHYALMVGLLGRACLFTEA 605
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 13/325 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ L+ K+G V A+ +F+E P R WNA+I G + NG+ +A + +ML++G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T++ +LP C + + QG+ VH A K + ++L+ YSKC +G + L
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M+ K+ + W MI + ++G EA+ V ++M VT+ +L
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL-------SA 261
Query: 265 KLGKE-VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+ E +H V+K G + V L+ Y CG +A+ ++ + + T+++
Sbjct: 262 HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
Y K A+ F + +L C ++ ++ + Y I++
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS----LHGYAIKSG 377
Query: 384 KEHCTFMVQ-LLTRYGKLDEAQRFL 407
T +V L+T Y K D+ + L
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVL 402
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 126/278 (45%), Gaps = 7/278 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K + A +F E +S +WN MI + +G EA+ + M E+
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ +T++ +L L H +K + +++V+SL+ YS+CG + + RL
Sbjct: 250 ISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ ++ +++ T+++ E G ++ A+ + + D V L +L C + +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+G +HG +K G + V LI MY + +F + + ++W ++I
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 325 GYKEWYREAIDLF-DLMMSNGCSPNTFTFEAVLSICDR 361
A ++F +M++ G P+ T ++L+ C +
Sbjct: 424 VQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 110 RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL-PICAKLRTLK-QGK 167
R +S +++++ H + R +L PN TM + L + K Q +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
+V + K V + +SL+ +Y K G + + LFD M +++ ++W A+I NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
+ +A + M TL +L CG+ V G+ VHG K G V
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSP 347
LI+ Y C +A+++F + DK +++W +I AY EAI +F M
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 348 NTFTFEAVLS 357
+ T +LS
Sbjct: 251 SPVTIINLLS 260
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML-CVCGELRRVKLGKE-VHGQVL 275
+++ SC+ + + + R + + + T++ L KL E V +
Sbjct: 18 SLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLT 77
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAID 335
K G YV L+N+Y G +A+++F +P++ ++ W ALI Y + +A
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
LF +M+ G SP+ T +L C + GFV + + +E + ++ +
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 396 RYGKLDEAQ-RFLEM 409
+ +L A+ F EM
Sbjct: 198 KCAELGSAEVLFREM 212
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SSLI ++ K G V AR+VF + + + +NAMISG A+N EAL V+ M G +
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ IT ++ + +R ++ V+ + LM +
Sbjct: 216 PDVITWNALISGFSHMRNEEK----------------VSEILELMCL------------- 246
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNE-ALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
DG K +V+ WT++I V N F NE A + M ++ T+ +L C L
Sbjct: 247 -DGY-KPDVVSWTSIISGLVHN-FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+K GKE+HG + G +V + L++MYG CG A ++F P K ++T+ ++I
Sbjct: 304 MKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC 363
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
Y +A++LFD M + G + TF A+L+ C AG + F LM + Y I
Sbjct: 364 YANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVP 423
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLE---MSPSL 413
EH MV LL R GKL EA ++ M P L
Sbjct: 424 RLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 37/330 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ + + G V AR+VF+E P+R +S MI A NG+ +E+L++ R M ++G +
Sbjct: 55 AKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLK 114
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ + +L L + GK +H LK + +VSSL+ MYSK G +G + ++
Sbjct: 115 LDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKV 174
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + +++++++ AMI N +EAL +++ M+L + D +T ++ +R
Sbjct: 175 FSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRN- 233
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+E ++L+L C + G PD ++WT++I
Sbjct: 234 ---EEKVSEILEL-----------------MC--------LDGYKPD--VVSWTSIISGL 263
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
+ +A D F M+++G PN+ T +L C +++ +E
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLE--- 320
Query: 385 EHCTFMVQLLTRYGK---LDEAQRFLEMSP 411
+H LL YGK + EA +P
Sbjct: 321 DHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%)
Query: 161 RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI 220
R +G+ +HA+ + + + L+ Y +CG + + ++FD M K+++ MI
Sbjct: 30 RLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI 89
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
+C NG+ E+L R M + D + +L L + GK +H VLK +
Sbjct: 90 GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
S ++ + LI+MY G NA+ VF + ++ + + A+I Y EA++L M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 341 MSNGCSPNTFTFEAVLS 357
G P+ T+ A++S
Sbjct: 210 KLLGIKPDVITWNALIS 226
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 2/299 (0%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
+N MI G + EAL + M++ G P+ T +L C +L+++++GK++H
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALA 234
K V + +SL+ MY +CG + S +F+ +E K W++M+ + G +E L
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 235 VMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
+ R M T +A+ + L C + LG +HG +L+ V L++MY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 294 GACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
CG D A +F + + ++T++A+I A+ +F M+ G P+ +
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 354 AVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+VL+ C +G V++ R F +++ ++E + EH +V LL R G L+EA ++ P
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+SLI ++ + G ++L+ VFE+ ++ ++W++M+S A G E L R M E
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ M+ L CA L G +H + L+ ++ + +SL+ MY KCG + ++
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F MEK+N + ++AMI +G AL + M D V +L C
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGL 350
Query: 264 VKLGKEVHGQVLKLGF---ASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
VK G+ V ++LK G + HY L+++ G G+ + A ++P +K + W
Sbjct: 351 VKEGRRVFAEMLKEGKVEPTAEHYGC--LVDLLGRAGLLEEALETIQSIPIEKNDVIWRT 408
Query: 320 LI 321
+
Sbjct: 409 FL 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 198 IGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
+ Y+ +F G++ + MI V EAL M D T +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
C L+ ++ GK++HGQV KLG + +V LINMYG CG + + VF + K + +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 318 TALIRAYGYKEWYREAIDLFDLMMS 342
++++ A + E + LF M S
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCS 226
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G +D A +F++ +R+ ++AMISGLA +G AL M++EG
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ + + +L C+ +K+G+ V A LK + P L+ + + G++ ++
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 204 LFDGME-KKNVILWTAMIDSC 223
+ +KN ++W + C
Sbjct: 393 TIQSIPIEKNDVIWRTFLSQC 413
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 152/350 (43%), Gaps = 34/350 (9%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML--EEGKRPNWITMMVI 153
+++ A VF ++ WN +I G + + FP A+ ML +P +T +
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMY--------------------- 192
+L + G+++H +K + ++++ MY
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 193 ----------SKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT 242
+KCG+I + LFD M ++N + W +MI V NG +AL + R MQ
Sbjct: 193 VAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEK 252
Query: 243 RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA 302
+ D T+ +L C L + G+ +H +++ F V LI+MY CG +
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
VF P K W ++I + A+DLF + +G P++ +F VL+ C +
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHS 372
Query: 363 GFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
G V A FF LM Y IE S +H T MV +L G L+EA+ ++ P
Sbjct: 373 GEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMP 422
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 132/243 (54%), Gaps = 6/243 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I K G +D A+ +F+E P+R+ +WN+MISG NG ++AL+ R M E+ +
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ TM+ +L CA L +QG+ +H Y ++ RF + +V++L+ MY KCG I + +
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC---GEL 261
F+ KK + W +MI NGF A+ + ++ + D+V+ +L C GE+
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTAL 320
R + + + + HY ++N+ G G+ + A+ + +P ++ ++ W++L
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTL--MVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Query: 321 IRA 323
+ A
Sbjct: 434 LSA 436
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 116/289 (40%), Gaps = 37/289 (12%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMY-SKCGVIGYSIRLFDGMEKKNVIL 215
C+ +R LKQ +HA +K + S ++ + + Y+ +F + KN +
Sbjct: 35 CSTMRELKQ---IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV 91
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQ--RADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
W +I + F A+++ M + + +T + G L + + G+++HG
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 274 VLKLGFASVHYVAAELINMY-------------------------------GACGVFDNA 302
V+K G ++ +++MY CG+ D A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
+ +F +P + ++W ++I + +++A+D+F M P+ FT ++L+ C
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 363 GFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
G E + + E + T ++ + + G ++E E +P
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 154/327 (47%), Gaps = 10/327 (3%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ + + N + A+ F+ P + ++WN MI+G A G +A E M+E+ + +
Sbjct: 130 MLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNE-VS 188
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
W M+ C L E ++ K + V ++++ Y K + + +F
Sbjct: 189 WNAMISGYIECGDL-------EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 207 GME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
M KN++ W AMI VEN + L + R+M R ++ L+ L C EL ++
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
LG+++H V K + LI+MY CG +A +F + K + W A+I Y
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASK 384
+A+ LF M+ N P+ TF AVL C+ AG V +F+ M Y++E
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 385 EHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H T MV LL R GKL+EA + + P
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMP 448
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+++I + K V+LA +F++ + +++ WNAMISG N P + L+ R MLEEG
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RPN + L C++L L+ G+++H K VT ++SL+ MY KCG +G + +
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+ M+KK+V+ W AMI ++G ++AL + R M + R D +T +L C
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 264 VKLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
V +G E + K+ HY ++++ G G + A + ++P
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTC--MVDLLGRAGKLEEALKLIRSMP 448
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 17/336 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ ++ + G D A VF R V +WN +I + +G AL+ LM E +
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ T+ +++ IC+ LR L +GK+ A +K FL + ++ + + M+SKC + S++L
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 205 FDGMEKKNVILWTAMIDS-----CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
F +EK + +L +MI S C E+ LA+ +S+ R D T + +L
Sbjct: 293 FRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSV-----RPDKFTFSSVL---S 344
Query: 260 ELRRVKL--GKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
+ V L G +VH V+KLGF VA L+ MY G D A VF K + W
Sbjct: 345 SMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFW 404
Query: 318 TALIRAYGYKEWYREAIDLFD-LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS 376
+I E++ +F+ L+M+ P+ T +L C AGFV + + F M
Sbjct: 405 NTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSME 464
Query: 377 -TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ + EH +++LL R G ++EA+ + P
Sbjct: 465 KAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 138/270 (51%), Gaps = 10/270 (3%)
Query: 92 FKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMM 151
FK G ++ A +F+E P R V +WN MISGL GF + M RP T
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIRLFDGMEK 210
++ + +R G+++H A+ + +V +S+M MY + GV Y++ +F ME
Sbjct: 141 ILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 211 KNVILWTAMIDSCVENGFLNEALA---VMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG 267
++V+ W +I SC ++G AL +MR M++ + D T++ ++ +C +LR + G
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEI---QPDEYTVSMVVSICSDLRELSKG 254
Query: 268 KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
K+ +K+GF S V I+M+ C D++ +F + S+ ++I +Y +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+A+ LF L M+ P+ FTF +VLS
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLS 344
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
L K VH Q+L+ GF Y + +Y G NA +F +PDK ++TW ++
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
+ A+DLFD M + ++ ++S GF E R F M +EI ++
Sbjct: 82 KNGYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 386 HCTFMVQLLT--RYGK 399
+ + L+T R+G+
Sbjct: 138 TFSILASLVTCVRHGE 153
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 42/368 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP--RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
++L Q + G + A+++F+E P + W ++S + G +++ M +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ ++++ + +CAKL L ++ H A+K L V + ++LM MY KCG++
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 203 RLFDGMEKKNVILWTAMIDSCVE-------------------------------NGFLNE 231
R+F+ +E+K+V+ WT ++D+ V+ GF E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 232 ALAVMRSMQLTRQRA-DTVTLTRMLCVCGELRRVKLGKEVHGQVLK----LGFASVH--- 283
L ++ M + VTL ML C + + +G+ VH LK +G + +
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 284 YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
V L++MY CG D++ VF + + +TW AL R ID+F M+
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE 346
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
P+ TF AVLS C +G V++ +R F + Y +E +H MV LL R G ++EA
Sbjct: 347 -VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
Query: 404 QRFLEMSP 411
+ + P
Sbjct: 406 EILMREMP 413
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 152 VILPICAKLRTLKQGKEVHAY----ALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD- 206
++L CA L+ GKE+HA LK+ P + ++L Y+ G + + +LFD
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKK--APRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 207 -GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ +K+ + WT ++ S G L ++ + M+ R D V++ + VC +L +
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++ HG +K+G + V L++MYG CG+ K +F + +K ++WT ++
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 36/229 (15%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K GN+D + VF +R+V WNA+ SGLA +G R ++ M+ E K
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVK- 348
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
P+ +T +L C+ + +G R F +S+R
Sbjct: 349 PDDLTFTAVLSACSHSGIVDEG--------WRCF---------------------HSLRF 379
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
+ G+E K V + M+D G + EA +MR M + + V L +L C +V
Sbjct: 380 Y-GLEPK-VDHYACMVDLLGRAGLIEEAEILMREMPVP---PNEVVLGSLLGSCSVHGKV 434
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++ + + +++++ + Y + NMY A G D A + G++ +G
Sbjct: 435 EIAERIKRELIQMSPGNTEYQIL-MSNMYVAEGRSDIADGLRGSLRKRG 482
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 2/321 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVF-EESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+SL+ ++ K + +A ++F S + AWN M+ G + +E R + G
Sbjct: 370 NSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGI 429
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ + ++ C+ + + GK +H Y +K +++V+SL+ +Y K G + + R
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F + NVI W AMI S V +A+A+ M + ++TL +L C
Sbjct: 490 MFCEADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
++ G+ +H + + ++A LI+MY CG + ++ +F A K ++ W +I
Sbjct: 549 LERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISG 608
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEAS 383
YG AI LFD M + P TF A+LS C AG VE + F M Y+++ +
Sbjct: 609 YGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPN 668
Query: 384 KEHCTFMVQLLTRYGKLDEAQ 404
+H + +V LL+R G L+EA+
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAE 689
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 8/329 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S LI + G +L+ +VF RR + WN++I NG +L + ML G+
Sbjct: 63 SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIR 203
P+ T +++ CA+L G VH LK T V +S + YSKCG + +
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL 182
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC---VCGE 260
+FD M ++V+ WTA+I V+NG L + M D + C C
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
L +K G+ +HG +K G AS +V + + + Y G A L F + D+ +WT++
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED--AFRFFDLMSTY 378
I + E+ D+F M + G P+ +++ + V AF F + +
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
++++ C ++ + ++ L A++
Sbjct: 363 SLDSTV--CNSLLSMYCKFELLSVAEKLF 389
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 4/285 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+S + + K G + A VF+E P R V AW A+ISG NG L Y+ M G
Sbjct: 165 ASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSD 224
Query: 144 --RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
+PN T+ C+ L LK+G+ +H +A+K + SS+ YSK G +
Sbjct: 225 VDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
F + +++ WT++I S +G + E+ + MQ D V ++ ++ G++
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM-TWTAL 320
V GK HG V++ F+ V L++MY + A+ +F + ++G+ W +
Sbjct: 345 MLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFV 365
++ YG + + + I+LF + + G ++ + +V+S C G V
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+++ + + +C + +L+ ++ +A + ++ + S L+ Y+ G S R+F
Sbjct: 23 SYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVF 82
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ ++++ LW ++I + NG +L SM L+ Q D T ++ C EL
Sbjct: 83 HLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFH 142
Query: 266 LGKEVHGQVLKL-GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+G VHG VLK GF V A + Y CG +A LVF +PD+ + WTA+I +
Sbjct: 143 VGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGH 202
Query: 325 GYKEWYREAIDLFDLMMSNGCS---PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
+ M S G PN T E C G +++ +
Sbjct: 203 VQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 382 ASKEHCTFMVQLLTRYGKLDEA 403
+SK + M ++ G EA
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEA 284
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 152/328 (46%), Gaps = 40/328 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ ++ K G + A+ VF + +WN++I+GL EA E M
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM------ 367
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
GK++ ++ + ++ +S G I + L
Sbjct: 368 --------------------PGKDMVSW-------------TDMIKGFSGKGEISKCVEL 394
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M +K+ I WTAMI + V NG+ EAL M ++ T + +L L +
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
G ++HG+V+K+ + V L++MY CG ++A +F + + +++ +I Y
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEAS 383
Y + ++A+ LF ++ S+G PN TF A+LS C G+V+ +++F M S+Y IE
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 384 KEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+H MV LL R G LD+A + P
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMP 602
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
SS++ + K G + AR +F+ R+V W AMI G GF + M +EG
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ N T+ V+ C ++G ++H + + + +SLM MYSK G +G +
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F M+ K+ + W ++I V+ ++EA + M D V+ T M
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM----PGKDMVSWTDM--------- 378
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
I + G +FG +P+K ++TWTA+I A
Sbjct: 379 --------------------------IKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
+ +Y EA+ F M+ PN++TF +VLS
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 31/284 (10%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHN------------GFP-REAL 132
++I + + G + A QVF+E P R +++NAMI+ + N P + A+
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAV 145
Query: 133 EYVRLM---LEEGKRPNWITMMVILPI------------CAKLRTLKQGKEVHAYALKRR 177
Y ++ + G+ + P+ LR K + V + +
Sbjct: 146 SYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVF--QGM 203
Query: 178 FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAV-M 236
+ V SS++ Y K G I + LFD M ++NVI WTAMID + GF + + +
Sbjct: 204 AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFL 263
Query: 237 RSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC 296
R Q + ++ TL M C + R + G ++HG V ++ ++ L++MY
Sbjct: 264 RMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL 323
Query: 297 GVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
G AK VFG + +K S++W +LI ++ EA +LF+ M
Sbjct: 324 GYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ +I+ +G + ++F P + W AMIS NG+ EAL + ML++
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T +L A L L +G ++H +K + +++ +SL+ MY KCG + ++
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F + + N++ + MI NGF +AL + ++ + + + VT +L C + V
Sbjct: 496 FSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYV 555
Query: 265 KLGKEVHGQVLKLGF----ASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-GSMTWTA 319
LG + + + +K + HY A ++++ G G+ D+A + +P K S W +
Sbjct: 556 DLGWK-YFKSMKSSYNIEPGPDHY--ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGS 612
Query: 320 LIRA 323
L+ A
Sbjct: 613 LLSA 616
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 154/344 (44%), Gaps = 35/344 (10%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR+V E R+ W A+I G A G EA+ M +E P T +L C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI----- 214
++ L G++ HA + R V + ++++ MY KC I + ++FD M +++VI
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 215 --------------------------LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
WTAM+ +N EAL M+ + RAD
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV--AAELINMYGACGVFDNAKLVF 306
VT+ + C +L K K G++ +V + LI+MY CG + A VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 307 GAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG-CSPNTFTFEAVLSICDRAGFV 365
++ +K T++++I +EA+ LF M++ PNT TF L C +G V
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 366 EDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ + FD M T+ ++ +++H T MV LL R G+L EA ++
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ LI + + GN++ A ++FE P + + AW AM++G A N P+EALEY M + G R
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLP--HVTMVSSLMVMYSKCGVIGYSI 202
+ +T+ + CA+L K A K + P HV + S+L+ MYSKCG + ++
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGEL 261
+F M KNV +++MI +G EAL + M T + +TVT L C
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHS 398
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
V G++ VFD+ FG P + +T ++
Sbjct: 399 GLVDQGRQ----------------------------VFDSMYQTFGVQPTRDH--YTCMV 428
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
G +EA++L M P+ + A+L C
Sbjct: 429 DLLGRTGRLQEALELIKTM---SVEPHGGVWGALLGAC 463
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI--GYSIRLFDGMEKKNVILWTAM 219
L Q K++H + L++ +++ L+ +K GV Y+ R+ + ++ +N LWTA+
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL-G 278
I G +EA+A+ M+ + T + +L CG ++ + LG++ H Q +L G
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 279 FASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
F V YV +I+MY C D A+ VF +P++ ++WT LI AY A +LF+
Sbjct: 181 FCFV-YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYG 398
+ + + + A+++ + ++A +FD M I A + + + G
Sbjct: 240 SLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 399 KLDEAQRFLEMS 410
A R ++++
Sbjct: 296 ASKYADRAVQIA 307
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 22/333 (6%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +VF+E RR +WNA+I+ NG E L ML P+ T IL C
Sbjct: 436 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG 495
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL--------------- 204
+L G E+H+ +K + ++ SL+ MYSKCG+I + ++
Sbjct: 496 -GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTME 554
Query: 205 -FDGMEKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ M K + + W ++I V +A + M D T +L C
Sbjct: 555 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 614
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
L LGK++H QV+K S Y+ + L++MY CG +++L+F + +TW A
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 674
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TY 378
+I Y + EAI LF+ M+ PN TF ++L C G ++ +F +M Y
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 734
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
++ H + MV +L + GK+ A + P
Sbjct: 735 GLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ +I + K ++ A F P R V +WN+M+SG NG +++E M EG
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+ T +IL +C+ L G ++H ++ V S+L+ MY+K S+R+
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F G+ +KN + W+A+I CV+N L+ AL + MQ +L C L +
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY 324
+LG ++H LK FA+ V ++MY C +A+++F + ++ A+I Y
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDL 374
+E +A+ LF +MS+G + + V C + + + + L
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 4/278 (1%)
Query: 84 PSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
S+L+ ++ K + +VF+ P ++ +W+A+I+G N AL++ + M +
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +L CA L L+ G ++HA+ALK F + ++ + MY+KC + +
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 204 LFDGMEKKNVILWTAMID--SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
LFD E N + AMI S E+GF +AL + + + D ++L+ + C +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGF--KALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
+ + G +++G +K + VA I+MYG C A VF + + +++W A+I
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAII 455
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
A+ E + LF M+ + P+ FTF ++L C
Sbjct: 456 AAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC 493
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K G++ +R +FE+S RR WNAMI G AH+G EA++ M+ E +
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF-----LPHVTMVSSLMVMYSKCGVIG 199
PN +T + IL CA + + +G E + Y +KR + LPH S+++ + K G +
Sbjct: 702 PNHVTFISILRACAHMGLIDKGLE-YFYMMKRDYGLDPQLPH---YSNMVDILGKSGKVK 757
Query: 200 YSIRLFDGME-KKNVILWTAMIDSCV 224
++ L M + + ++W ++ C
Sbjct: 758 RALELIREMPFEADDVIWRTLLGVCT 783
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 13/321 (4%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK------RPNWI 148
G++ A Q+F P+ + WNA+I G A + P A + R ML++ R + +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T L CA+ ++H +R + ++L+ YSK G + + +LFD M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
++V W A+I V +EA+ + + M+ R VT+ L C L VK G+
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 269 EVHGQVLKLGFASVHYVAAEL-INMYGACGVFDNAKLVFGAVPDKGSM-TWTALIRAYGY 326
+ G+++ + + + I+MY CG D A VF K S+ TW +I +
Sbjct: 231 NIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
A+++FD + NG P+ ++ A L+ C AG VE F+ M+ +E + +H
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKH 345
Query: 387 CTFMVQLLTRYGKLDEAQRFL 407
+V LL+R G+L EA +
Sbjct: 346 YGCVVDLLSRAGRLREAHDII 366
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + K G++ A ++F+E P R V++WNA+I+GL EA+E + M EG R
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 145 PNWITMMVILPICAKLRTLKQGKEV-HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+ +T++ L C+ L +K+G+ + H Y+ +V + ++ + MYSKCG + + +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+F+ KK+V+ W MI +G + AL + ++ + D V+ L C
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 263 RVKLGKEV 270
V+ G V
Sbjct: 323 LVEYGLSV 330
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 132 LEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVM 191
+E+ R + +E +PN + ++ C + + +E+ L R T + ++
Sbjct: 157 VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNH----TSWNVMLAG 212
Query: 192 YSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTL 251
Y K G + + R+F M ++ + W+ MI NG NE+ R +Q + V+L
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 252 TRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD 311
T +L C + + GK +HG V K G++ + V LI+MY CG A+LVF + +
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 312 KGSM-TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
K + +WT++I EA+ LF+ M + G +P+ +F ++L C AG +E+
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 371 FFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+F M Y IE EH MV L R GKL +A F+ P
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 121/241 (50%), Gaps = 13/241 (5%)
Query: 91 HFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITM 150
+ K G ++ A+++F E P R +W+ MI G+AHNG E+ Y R + G PN +++
Sbjct: 213 YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSL 272
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM-E 209
+L C++ + + GK +H + K + V++ ++L+ MYS+CG + + +F+GM E
Sbjct: 273 TGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 210 KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKE 269
K+ ++ WT+MI +G EA+ + M D ++ +L C ++ G++
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 270 VHGQVLKLGFASVHYVAAEL------INMYGACGVFDNAKLVFGAVP-DKGSMTWTALIR 322
++ + V+++ E+ +++YG G A +P ++ W L+
Sbjct: 393 YFSEMKR-----VYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLG 447
Query: 323 A 323
A
Sbjct: 448 A 448
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 88/186 (47%), Gaps = 7/186 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE-SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++LI ++ + GNV +AR VFE +R + +W +MI+GLA +G EA+ M G
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL--PHVTMVSSLMVMYSKCGVIGYS 201
P+ I+ + +L C+ +++G++ + +KR + P + ++ +Y + G + +
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFS-EMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 202 IRLFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQL--TRQRADTVTLTRMLCVC 258
M I+W ++ +C +G + A V + + D V L+
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 259 GELRRV 264
G+ + V
Sbjct: 487 GKWKDV 492
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 14/230 (6%)
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV--MYSKCGVIGYSIRLFDGM 208
+ +L C LR L Q +H +K L++ S + Y+ RL
Sbjct: 9 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 65
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR---ADTVTLTRMLCVCGELRRVK 265
+ + ++ ++ E+ + ++AV +++ R+ D+ + ++ R ++
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVF--VEMMRKGFVFPDSFSFAFVIKAVENFRSLR 123
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYG 325
G ++H Q LK G S +V LI MYG CG + A+ VF + + W A+I A
Sbjct: 124 TGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF 183
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
A ++FD M+ N ++ +L+ +AG +E A R F M
Sbjct: 184 RGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEM 229
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 48/333 (14%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
SL+ ++ K G + A QVFEESP R S+ WN +I+G Y R
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING------------YCR----- 208
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLP--HVTMVSSLMVMYSKCGVIG 199
K++H R +P + S+L+ Y G +
Sbjct: 209 ------------------------AKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELN 244
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ +LF+ M +KNV+ WT +I+ + G A++ M + + T+ +L C
Sbjct: 245 RAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACS 304
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ + G +HG +L G + L++MY CG D A VF + K ++WTA
Sbjct: 305 KSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTA 364
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TY 378
+I+ + + +AI F MM +G P+ F AVL+ C + V+ FFD M Y
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDY 424
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
IE + +H +V LL R GKL+EA +E P
Sbjct: 425 AIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP 457
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI+ + G ++ A+Q+FE P ++V +W +I+G + G A+ MLE+G +
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN T+ +L C+K L G +H Y L + ++L+ MY+KCG + + +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F M K+++ WTAMI +G ++A+ R M + ++ D V +L C V
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 265 KLGKEVHGQVLKLGFAS----VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM-TWTA 319
LG ++L +A HYV ++++ G G + A + +P + TW A
Sbjct: 411 DLGLNFFDS-MRLDYAIEPTLKHYVL--VVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 320 LIRAYGYKEWYREA 333
L RA + YR A
Sbjct: 468 LYRACKAHKGYRRA 481
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 158/382 (41%), Gaps = 69/382 (18%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G + A ++F+E P+ VS N ++ G A + P + + M + G P+ T +L
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 155 PICAKLRTLKQGKEVHAYALKRRFL-------------------------------PHVT 183
C+KL G H ++ F+ H
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 184 MVSSLMVMYSKCGVIGYSIRLFDGM-------------------------------EKKN 212
SS+ Y+K G I ++RLFD M +K+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V+ W AMI V G+ EAL + + M+ + D VT+ +L C L ++ GK +H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 273 QVLKLG-FASVHYVAA----ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYK 327
+L+ +S YV LI+MY CG D A VF V D+ TW LI
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH 359
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEH 386
+I++F+ M PN TF V+ C +G V++ ++F LM Y IE + +H
Sbjct: 360 H-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKH 418
Query: 387 CTFMVQLLTRYGKLDEAQRFLE 408
MV +L R G+L+EA F+E
Sbjct: 419 YGCMVDMLGRAGQLEEAFMFVE 440
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 9/226 (3%)
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLM--VMYSKCGVIGYSIRLFDGMEKKNVI 214
C +RTLKQ +HA + + ++++V L+ S G + Y+ +LFD + K +V
Sbjct: 22 CKNIRTLKQ---IHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVS 78
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
+ ++ ++ + +++ M+ D T T +L C +L G HG+V
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
++ GF YV LI + CG A +F + W+++ Y + EA+
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
LFD M + + +++ C + ++ A FD + ++
Sbjct: 199 RLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDV 240
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ K G++D A +VF R +S WN +I GLA + ++E M EE +R
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIE----MFEEMQR 373
Query: 145 ----PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL---PHVTMVSSLMVMYSKCGV 197
PN +T + ++ C+ + +G++ ++L R P++ ++ M + G
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKY--FSLMRDMYNIEPNIKHYGCMVDMLGRAGQ 431
Query: 198 IGYSIRLFDGME-KKNVILWTAMIDSC-----VENG-FLNEALAVMRSMQLTRQRADTVT 250
+ + + M+ + N I+W ++ +C VE G + NE L MR + D V
Sbjct: 432 LEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK----DESGDYVL 487
Query: 251 LTRMLCVCGELRRVK 265
L+ + G+ V+
Sbjct: 488 LSNIYASTGQWDGVQ 502
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 17/332 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ ++ ++ K G + AR F+E P RS +W A+ISG G L+ + ++
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG----ELDLASKLFDQ--M 170
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGV--IGY 200
P+ +++ + +K G A +R F + H T+++ +++ C + I
Sbjct: 171 PHVKDVVIYNAMMDGF--VKSGDMTSA---RRLFDEMTHKTVITWTTMIHGYCNIKDIDA 225
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCG 259
+ +LFD M ++N++ W MI +N E + + + MQ T D VT+ +L
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 260 ELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ + LG+ H V + V +++MY CG + AK +F +P+K +W A
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
+I Y R A+DLF MM P+ T AV++ C+ G VE+ ++F +M
Sbjct: 346 MIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMG 404
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ A EH MV LL R G L EA+ + P
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 16/321 (4%)
Query: 97 VDLARQVFEESPRRSVSAW-NAMISG-LAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
+ AR++F++ P+R S N+MI L +P Y L E P+ T +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
C+ + QG ++H+ + F + + + ++ MY+K G +G + FD M ++ +
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
WTA+I + G L+ A + M + D V M+ VK G +
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMM-----DGFVKSGDMTSAR- 196
Query: 275 LKLGFASVHYVAAELINM-YGACGV--FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+L H M +G C + D A+ +F A+P++ ++W +I Y + +
Sbjct: 197 -RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 332 EAIDLF-DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
E I LF ++ + P+ T +VL G + + +++ + CT +
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 391 VQLLTRYGKLDEAQRFLEMSP 411
+ + ++ G++++A+R + P
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMP 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 9/240 (3%)
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM-EKKNVILWTAMIDSCVENGFLNEA 232
L+ +V + + +V+ + IGY+ +LFD ++ + L +MI + +E ++
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 233 LAVMRSMQLTRQRA-DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
A+ R ++ A D T T + C V G ++H Q+ + GF + YV+ +++
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 292 MYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFT 351
MY G A+ F +P + ++WTALI Y A LFD M +
Sbjct: 122 MYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVI 178
Query: 352 FEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ A++ ++G + A R FD M+ + T M+ +D A++ + P
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVIT----WTTMIHGYCNIKDIDAARKLFDAMP 234
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 109/218 (50%), Gaps = 16/218 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGK 143
++++ ++ K G ++ A+++F+E P + V++WNAMI G A NG R AL+ +V +M+EE
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-- 370
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ ITM+ ++ C +++G++ + + ++ + + G + +
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFLNEALAVM-RSMQLTRQRADTVTLTRMLCVCGE- 260
L M + N I+ ++ + +C + + A ++ ++++L Q L R L +
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 261 ----------LRRVKLGKEVHGQVLKLGFASVHYVAAE 288
+R+ + KEV ++++ + +++ +
Sbjct: 491 WDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGD 528
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 155/329 (47%), Gaps = 10/329 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S + + K ++ AR+VF E P R+ +W A++ +G EA LM E
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER--- 205
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N + ++ K L K++ KR + + +M+ Y+K G + + L
Sbjct: 206 -NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDG----YAKGGDMVSARDL 260
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ +V W+A+I +NG NEA V M + D + ++ C ++
Sbjct: 261 FEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF 320
Query: 265 KLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+L ++V + ++ S HYV LI+M CG D A +F +P + +++ +++
Sbjct: 321 ELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEG 380
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEA 382
EAI LF+ M+ G P+ F +L +C ++ VE+ R+F+LM Y I A
Sbjct: 381 MAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILA 440
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
S +H + +V LL+R GKL EA ++ P
Sbjct: 441 SPDHYSCIVNLLSRTGKLKEAYELIKSMP 469
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 24/318 (7%)
Query: 103 VFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-KRPNWITMMVILPICAKLR 161
VFE P WN +I G ++ E + + M+ G RP+ T +++ +C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 162 TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMID 221
++ G VH L+ F V + +S + Y KC + + ++F M ++N + WTA++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFAS 281
+ V++G L EA + M + R L L G+L K++ ++ K S
Sbjct: 185 AYVKSGELEEAKS-MFDLMPERNLGSWNALVDGLVKSGDLVN---AKKLFDEMPKRDIIS 240
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM 341
+I+ Y G +A+ +F W+ALI Y EA +F M
Sbjct: 241 Y----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVE-----DAF---RFFDLMSTYEIEASKEHCTFMVQL 393
+ P+ F ++S C + G E D++ R S Y + A ++ +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPA-------LIDM 349
Query: 394 LTRYGKLDEAQRFLEMSP 411
+ G +D A + E P
Sbjct: 350 NAKCGHMDRAAKLFEEMP 367
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 3/300 (1%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
WN ++ + P +A++ M+ P+ ++ +++ ++ GKE+H+ A+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALA 234
+ F+ S + +Y K G + ++FD ++ + W A+I G NEA+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 235 VMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL--KLGFASVHYVAAELINM 292
+ M+ + D T+ + CG L + L ++H VL K S + LI+M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 293 YGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
YG CG D A +F + + ++W+++I Y EA++ F M G PN TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 353 EAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
VLS C G VE+ +F +M S +E+E H +V LL+R G+L EA++ +E P
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 8/243 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S I L+ K G + AR+VF+E+P R + +WNA+I GL H G EA+E M G
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYAL--KRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ TM+ + C L L ++H L K + M++SL+ MY KCG + +
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+F+ M ++NV+ W++MI NG EAL R M+ R + +T +L C
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 263 RVKLGKEVHGQV---LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWT 318
V+ GK + +L HY ++++ G AK V +P K + M W
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGC--IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWG 393
Query: 319 ALI 321
L+
Sbjct: 394 CLM 396
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI ++ K G +DLA +FEE +R+V +W++MI G A NG EALE R M E G R
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN IT + +L C +++GK A +K F P ++ ++ + S+ G + +
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 203 RLFDGME-KKNVILWTAMIDSCVENG 227
++ + M K NV++W ++ C + G
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 2/196 (1%)
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
LW ++ S + + +A+ V M + D +L ++ ++ LGKE+H
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
++LGF + + I +Y G F+NA+ VF P++ +W A+I + EA+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD--LMSTYEIEASKEHCTFMVQ 392
++F M +G P+ FT +V + C G + AF+ L + E ++ ++
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 393 LLTRYGKLDEAQRFLE 408
+ + G++D A E
Sbjct: 264 MYGKCGRMDLASHIFE 279
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 156/354 (44%), Gaps = 37/354 (10%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPRE---ALEYVRLMLEEGKRPNWITMM 151
G++ A VF P + N MI L+ P A+ R + +P+ T
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
+L I ++ + G+++H + F V +V+ L+ MY CG +G + ++FD M K
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 212 NVILWTAMID----------------------------SCVENGFL-----NEALAVMRS 238
+V +W A++ +CV +G+ +EA+ V +
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 239 MQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV 298
M + D VTL +L C +L ++LG+ + V G + +I+MY G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 299 FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
A VF V ++ +TWT +I EA+ +F+ M+ G PN TF A+LS
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 359 CDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
C G+V+ R F+ M S Y I + EH M+ LL R GKL EA ++ P
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 8/245 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP--RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
++L+ + K G +D AR + E P R+ +W +ISG A +G EA+E + ML E
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ +T++ +L CA L +L+ G+ + +Y R V++ ++++ MY+K G I ++
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+F+ + ++NV+ WT +I +G EALA+ M R + VT +L C +
Sbjct: 306 DVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 263 RVKLGKEVHGQVL-KLGFAS--VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WT 318
V LGK + + K G HY +I++ G G A V ++P K + W
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHY--GCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 319 ALIRA 323
+L+ A
Sbjct: 424 SLLAA 428
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 14/254 (5%)
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
L+TLKQ H Y + V+ + S G + Y+ +F N L
Sbjct: 27 NLKTLKQS---HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNT 83
Query: 219 MIDSCVENGFLNE------ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
MI + L+E A+ V R + + DT T +L + + V G+++HG
Sbjct: 84 MIRAL---SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHG 140
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
QV+ GF S +V LI MY +CG +A+ +F + K W AL+ YG E
Sbjct: 141 QVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDE 200
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQ 392
A L ++M N ++ V+S ++G +A F M +E + ++
Sbjct: 201 ARSLLEMMPC--WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 393 LLTRYGKLDEAQRF 406
G L+ +R
Sbjct: 259 ACADLGSLELGERI 272
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 9/325 (2%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP-NWITMMVIL 154
+++ + +VF + ++S N MI + + P E R + P N ++ L
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
C K L G ++H FL ++++LM +YS C + ++FD + K++ +
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQ---RADTVTLTRMLCVCGELRRVKLGKEVH 271
W + + N + L + M+ + D VT L C L + GK+VH
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+ + G + ++ L++MY CG D A VF + ++ ++WTALI + +
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST--YEIEASKEHCTF 389
EAI+ F+ M+ G SP T +LS C +G V + FFD M + ++I+ + H
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 390 MVQLLTRYGKLDEAQ---RFLEMSP 411
+V LL R LD+A + +EM P
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKP 385
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREAL---EYVRLMLEE 141
++L+ L+ N A +VF+E P+R +WN + S N R+ L + ++ ++
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
+P+ +T ++ L CA L L GK+VH + + + + ++L+ MYS+CG + +
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
++F GM ++NV+ WTA+I NGF EA+ M + TLT +L C
Sbjct: 272 YQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSAC 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N ++L+ ++ + G++D A QVF R+V +W A+ISGLA NGF +EA+E ML+
Sbjct: 253 NLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF 312
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G P T+ +L C+ H +V+ M+ + + +
Sbjct: 313 GISPEEQTLTGLLSACS----------------------HSGLVAEGMMFFDRMRSGEFK 350
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
I K N+ + ++D L++A ++++SM++ + D+ +L C
Sbjct: 351 I-------KPNLHHYGCVVDLLGRARLLDKAYSLIKSMEM---KPDSTIWRTLLGACRVH 400
Query: 262 RRVKLGKEVHGQVLKLGFASV-HYVAAELINMYGACG 297
V+LG+ V +++L YV L+N Y G
Sbjct: 401 GDVELGERVISHLIELKAEEAGDYVL--LLNTYSTVG 435
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 141/321 (43%), Gaps = 42/321 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + G + AR+VF+E P R AW M+S Y R++ +
Sbjct: 908 TTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSA------------YRRVLDMDS-- 953
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVM-YSKCGVIGYSIR 203
A +L + S+ ++ Y G + +
Sbjct: 954 --------------------------ANSLANQMSEKNEATSNCLINGYMGLGNLEQAES 987
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
LF+ M K++I WT MI +N EA+AV M D VT++ ++ C L
Sbjct: 988 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRA 323
+++GKEVH L+ GF Y+ + L++MY CG + A LVF +P K W ++I
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEA 382
+ +EA+ +F M PN TF +V + C AG V++ R + ++ Y I +
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVS 1167
Query: 383 SKEHCTFMVQLLTRYGKLDEA 403
+ EH MV L ++ G + EA
Sbjct: 1168 NVEHYGGMVHLFSKAGLIYEA 1188
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 14/243 (5%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI + GN++ A +F + P + + +W MI G + N REA+ M+EEG P+
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD 206
+TM ++ CA L L+ GKEVH Y L+ F+ V + S+L+ MYSKCG + ++ +F
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 207 GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
+ KKN+ W ++I+ +GF EAL + M++ + + VT + C V
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGA-CGVFDNAKLVFGAVPDKGSM-------TWT 318
G+ ++ ++ Y + YG +F A L++ A+ G+M W
Sbjct: 1152 GRRIYRSMID------DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 319 ALI 321
AL+
Sbjct: 1206 ALL 1208
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 115/276 (41%), Gaps = 45/276 (16%)
Query: 92 FKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALE-YVRLMLEEGKRPNWITM 150
FKR +DLA + +V +NA+ G P +LE YVR ML + P+ T
Sbjct: 818 FKR--LDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVR-MLRDSVSPSSYTY 874
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
+ + A + G+ + A+ K F HV + ++L+ YS G I + ++FD M +
Sbjct: 875 SSL--VKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
++ I WT M+ + L + + L Q ++ T
Sbjct: 933 RDDIAWTTMVSA------YRRVLDMDSANSLANQMSEKNEATSNC--------------- 971
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
LIN Y G + A+ +F +P K ++WT +I+ Y + Y
Sbjct: 972 ------------------LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRY 1013
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
REAI +F MM G P+ T V+S C G +E
Sbjct: 1014 REAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K G+++ A VF P++++ WN++I GLA +GF +EAL+ M E +
Sbjct: 1071 SALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVK 1130
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKR-RFLPHVTMVSSLMVMYSKCGVIGYSIR 203
PN +T + + C + +G+ ++ + + +V ++ ++SK G+I ++
Sbjct: 1131 PNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALE 1190
Query: 204 LFDGME-KKNVILWTAMIDSC-VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
L ME + N ++W A++D C + + +A + M L + L ++ + E
Sbjct: 1191 LIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL--LVSMYAEQ 1248
Query: 262 RRVKLGKEVHGQVLKLGFASV 282
R + E+ G++ +LG +
Sbjct: 1249 NRWRDVAEIRGRMRELGIEKI 1269
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 169/363 (46%), Gaps = 37/363 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + + G+ A F + + +WNA++ A + + L + +L E
Sbjct: 370 NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAIT 429
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL---PHVTMVSSLMVMYSKCGVIGYS 201
+ +T++ +L C ++ + + KEVH Y++K L + ++L+ Y+KCG + Y+
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 202 IRLFDGMEKKNVIL--------------------------------WTAMIDSCVENGFL 229
++F G+ ++ ++ W+ M+ E+
Sbjct: 490 HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCP 549
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
NEA+ V R +Q R +TVT+ +L VC +L + L ++ HG +++ G + + L
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR-LKGTL 608
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNT 349
+++Y CG +A VF + + + +TA++ Y +EA+ ++ M + P+
Sbjct: 609 LDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDH 668
Query: 350 FTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+L+ C AG ++D + +D + T + ++ + E V L+ R G+LD+A F+
Sbjct: 669 VFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVT 728
Query: 409 MSP 411
P
Sbjct: 729 QMP 731
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 37/312 (11%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+SL+ + + G ++ A +F + + +WN +I+G A N +A + ++ +G
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSI 202
P+ +T++ ILP+CA+L L GKE+H+Y L+ +L T V ++L+ Y++ G +
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
F M K++I W A++D+ ++ + L ++ + D+VT+ +L C ++
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 263 RVKLGKEVHGQVLKLGF--------------------ASVHYVAA--------------- 287
+ KEVHG +K G +V Y
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYN 506
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSP 347
L++ Y G D+A+++F + TW+ ++R Y EAI +F + + G P
Sbjct: 507 SLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Query: 348 NTFTFEAVLSIC 359
NT T +L +C
Sbjct: 567 NTVTIMNLLPVC 578
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 7/248 (2%)
Query: 85 SSLIQLHFKRGNV-DLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
++L+ ++ K G + A F+ + V +WNA+I+G + N +A LML+E
Sbjct: 161 NALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT 220
Query: 144 RPNWITMMVILPICAKLR---TLKQGKEVHAYALKRRFL-PHVTMVSSLMVMYSKCGVIG 199
PN+ T+ +LP+CA + + G+++H+Y ++R +L HV + +SL+ Y + G I
Sbjct: 221 EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIE 280
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVC 258
+ LF M K+++ W +I N +A + ++ D+VT+ +L VC
Sbjct: 281 EAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Query: 259 GELRRVKLGKEVHGQVLKLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
+L + GKE+H +L+ + V LI+ Y G A F + K ++W
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 318 TALIRAYG 325
A++ A+
Sbjct: 401 NAILDAFA 408
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM-LEEGKR 144
S++ ++ K +D +++F + WN +++GL+ + RE + + + M + +
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPK 119
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI-GYSIR 203
P+ +T ++LP+C +L GK +H+Y +K + ++L+ MY+K G I +
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
FDG+ K+V+ W A+I EN + +A M + T+ +L VC + +
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 264 ---VKLGKEVHGQVLKLGFASVH-YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
+ G+++H V++ + H +V L++ Y G + A +F + K ++W
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 320 LIRAYGYK-EWYREAIDLFDLMMSNG-CSPNTFTFEAVLSIC 359
+I Y EW++ A LF ++ G SP++ T ++L +C
Sbjct: 300 VIAGYASNCEWFK-AFQLFHNLVHKGDVSPDSVTIISILPVC 340
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 121/241 (50%), Gaps = 3/241 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + G+ D A+ +F E ++ W+ M+ A + P EA+ R + G R
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T+M +LP+CA+L +L ++ H Y + R L + + +L+ +Y+KCG + ++ +
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYII-RGGLGDIRLKGTLLDVYAKCGSLKHAYSV 624
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F +++++++TAM+ +G EAL + M + + D V +T ML C +
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLI 684
Query: 265 KLGKEVHGQVLKL-GFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIR 322
+ G +++ + + G A +++ G D+A +P + + W L+R
Sbjct: 685 QDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLR 744
Query: 323 A 323
A
Sbjct: 745 A 745
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 13/260 (5%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
++ CA + L G+ +H K + + S++ MY+KC + ++F M+ +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 213 VILWTAMIDS-CVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEV 270
++W ++ V G E + ++M + + +VT +L +C L GK +
Sbjct: 87 PVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSM 144
Query: 271 HGQVLKLGFASVHYVAAELINMYGACG-VFDNAKLVFGAVPDKGSMTWTALIRAYGYKEW 329
H ++K G V L++MY G +F +A F + DK ++W A+I +
Sbjct: 145 HSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNM 204
Query: 330 YREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED-AFRFFDLMSTYEIEAS--KEH 386
+A F LM+ PN T VL +C A ++ A R + +Y ++ S + H
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVC--ASMDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 387 ---CTFMVQLLTRYGKLDEA 403
C +V R G+++EA
Sbjct: 263 VFVCNSLVSFYLRVGRIEEA 282
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 147/330 (44%), Gaps = 42/330 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I + ++ AR+ F+ SP R + WN MISG G EA R + ++
Sbjct: 63 TSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEA----RSLFDQ--- 115
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+P ++V ++ ++++ Y+ G + R+
Sbjct: 116 ---------MPC----------RDVMSW-------------NTVLEGYANIGDMEACERV 143
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRR 263
FD M ++NV W +I +NG ++E L + M + T+T +L C +L
Sbjct: 144 FDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGA 203
Query: 264 VKLGKEVHGQVLKLGFASVHY-VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
GK VH LG+ V V LI+MYG CG + A VF + + ++W +I
Sbjct: 204 FDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIE 381
EA++LF M ++G SP+ TF VL C G VED +F+ M T + I
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIM 323
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EHC +V LL+R G L +A F+ P
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMP 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N ++LI ++ K G +++A +VF+ RR + +WN MI+GLA +G EAL M
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G P+ +T + +L C + ++ G + + S+M CG +
Sbjct: 285 GISPDKVTFVGVLCACKHMGLVEDG---------LAYFNSMFTDFSIMPEIEHCGCV--- 332
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+D GFL +A+ + M + +AD V +L
Sbjct: 333 ------------------VDLLSRAGFLTQAVEFINKMPV---KADAVIWATLLGASKVY 371
Query: 262 RRVKLGKEVHGQVLKLGFAS-VHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++V +G+ +++KL + ++V L N+YG G FD+A + A+ D G
Sbjct: 372 KKVDIGEVALEELIKLEPRNPANFVM--LSNIYGDAGRFDDAARLKVAMRDTG 422
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 196 GVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFL--NEALAVMRSMQLTRQRADTVTLTR 253
GVI + ++F M +KNV+LWT+MI NG+L + ++ R L+ +R D V
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMI-----NGYLLNKDLVSARRYFDLSPER-DIVLWNT 95
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
M+ E+ + + + Q+ S + V + Y G + + VF +P++
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTV----LEGYANIGDMEACERVFDDMPERN 151
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFF 372
+W LI+ Y E + F M+ G PN T VLS C + G AF F
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG----AFDFG 207
Query: 373 DLMSTY--EIEASKEHCTFMVQLLTRYGK 399
+ Y + +K L+ YGK
Sbjct: 208 KWVHKYGETLGYNKVDVNVKNALIDMYGK 236
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 40/344 (11%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGKRPNWITMMVI 153
G + + +F ++ + + A I+ + NG +A L YV+L+ E PN T +
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSE-INPNEFTFSSL 136
Query: 154 LPICAKLRTLKQGKEVHAYALKRRF-----------------------------LPHVTM 184
L C+ K GK +H + LK +P ++
Sbjct: 137 LKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSL 192
Query: 185 VSS--LMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT 242
VSS ++ Y+K G + + LFD M +++++ W MID ++GF N+AL + + +
Sbjct: 193 VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE 252
Query: 243 -RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDN 301
+ + D +T+ L C ++ ++ G+ +H V V LI+MY CG +
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEE 312
Query: 302 AKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS-NGCSPNTFTFEAVLSICD 360
A LVF P K + W A+I Y + ++A+ LF+ M G P TF L C
Sbjct: 313 AVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA 372
Query: 361 RAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEA 403
AG V + R F+ M Y I+ EH +V LL R G+L A
Sbjct: 373 HAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 126/243 (51%), Gaps = 8/243 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+++I + K+GNV+ AR +F+ R + +WN MI G A +GFP +AL + +L EGK
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ IT++ L C+++ L+ G+ +H + R +V + + L+ MYSKCG + ++
Sbjct: 256 KPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGELR 262
+F+ +K+++ W AMI +G+ +AL + MQ +T + +T L C
Sbjct: 316 VFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAG 375
Query: 263 RVKLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWT 318
V G E GQ + HY L+++ G G A + + D S+ W+
Sbjct: 376 LVNEGIRIFESMGQEYGIKPKIEHY--GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWS 433
Query: 319 ALI 321
+++
Sbjct: 434 SVL 436
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 39/288 (13%)
Query: 159 KLRTLKQGKEVHAYALKRRFLPHV---TMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
K +++ + ++HA L+ L H + L Y+ G I +S+ LF ++ L
Sbjct: 38 KSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFL 97
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
+TA I++ NG ++A + + + + T + +L C K GK +H VL
Sbjct: 98 FTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVL 153
Query: 276 KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY----------- 324
K G YVA L+++Y G +A+ VF +P++ ++ TA+I Y
Sbjct: 154 KFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARA 213
Query: 325 ------------------GYKE--WYREAIDLFDLMMSNG-CSPNTFTFEAVLSICDRAG 363
GY + + +A+ LF +++ G P+ T A LS C + G
Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIG 273
Query: 364 FVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+E + + I + + CT ++ + ++ G L+EA +P
Sbjct: 274 ALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 7/319 (2%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML---EEGKRPNWITMMVILPI 156
A +F+ + ++ MI + + P L Y LM+ EE P+++T ++
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 157 CAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
C K GK++H + +K FL + + ++ +Y + ++ + ++FD + + +V+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVK 185
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W +++ V G +E L V R M + D ++T L C ++ + GK +H V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 276 KLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
K + S +V L++MY CG + A VF + + +W ALI Y + ++A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 335 DLFD-LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQ 392
+ L +G P++ VL+ C GF+E+ + M + YEI EH + +V
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVD 365
Query: 393 LLTRYGKLDEAQRFLEMSP 411
L+ R G+LD+A +E P
Sbjct: 366 LMCRAGRLDDALNLIEKMP 384
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYV-RLMLEEGK 143
++L+ ++ K G ++ A +VF++ RR+V +W A+I G A G+ ++A+ + RL E+G
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGI 317
Query: 144 RPNWITMMVILPICAKLRTLKQGKE-VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ + ++ +L CA L++G+ + + P S ++ + + G + ++
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 203 RLFDGMEKKNVI-LWTAMIDSC 223
L + M K + +W A+++ C
Sbjct: 378 NLIEKMPMKPLASVWGALLNGC 399
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 154/349 (44%), Gaps = 42/349 (12%)
Query: 96 NVDLARQVFEESPRRSVSAWNAMISGLAHNGFP---REALEYVRLMLEEG-KRPNWITMM 151
N+ AR +F+ + + A+++ + + P A + RLM+ RPN
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYP 130
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRF-----------------LPHVTMV--------- 185
++L L + VH + K F + H+T+
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 186 ------SSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM 239
++++ Y++ G I ++ LF+ M +++V W A++ +C +NG EA+++ R M
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 240 -QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV 298
R + VT+ +L C + ++L K +H + +S +V+ L+++YG CG
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 299 FDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS---NGCSPNTFTFEAV 355
+ A VF K W ++I + EAI +F+ MM N P+ TF +
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 356 LSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFMVQLLTRYGKLDEA 403
L+ C G V +FDLM+ + IE EH ++ LL R G+ DEA
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 14/272 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++++ + + G++ A +FE+ P R V +WNA+++ NG EA+ R M+ E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
RPN +T++ +L CA+ TL+ K +HA+A +R V + +SL+ +Y KCG + +
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAV---MRSMQLTRQRADTVTLTRMLCVCGE 260
+F KK++ W +MI+ +G EA+AV M + + + D +T +L C
Sbjct: 317 VFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Query: 261 LRRVKLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MT 316
V G+ ++ + HY LI++ G G FD A V + K
Sbjct: 377 GGLVSKGRGYFDLMTNRFGIEPRIEHY--GCLIDLLGRAGRFDEALEVMSTMKMKADEAI 434
Query: 317 WTALIRA---YGYKEWYREAI-DLFDLMMSNG 344
W +L+ A +G+ + A+ +L L +NG
Sbjct: 435 WGSLLNACKIHGHLDLAEVAVKNLVALNPNNG 466
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 14/331 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + + G +D AR+VF++ P + +WN +IS A G A M K
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM--PLKS 231
Query: 145 P-NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P +W ++ C R +K + ++ + +TM+S Y+K G + +
Sbjct: 232 PASWNILIGGYVNC---REMKLARTYFDAMPQKNGVSWITMISG----YTKLGDVQSAEE 284
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ---RADTVTLTRMLCVCGE 260
LF M KK+ +++ AMI +NG +AL + M L R + D +TL+ ++ +
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSANSQ 343
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
L G V + + G ++ LI++Y G F A +F + K +++++A+
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAM 403
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
I G EA LF M+ PN TF +LS +G V++ ++ F+ M + +
Sbjct: 404 IMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
E S +H MV +L R G+L+EA ++ P
Sbjct: 464 EPSADHYGIMVDMLGRAGRLEEAYELIKSMP 494
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 14/285 (4%)
Query: 92 FKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMM 151
F R V +++ + +W ++ L+ + +E ++ M G P+ +
Sbjct: 49 FSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVT 108
Query: 152 VILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK 211
+L C K+ + GK +HA ALK V + + L+ +YS+ G I + + FD + +K
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK 168
Query: 212 NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH 271
N + W +++ +E+G L+EA V + D V+ L + ++ +G
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWN--LIISSYAKKGDMGNACS 222
Query: 272 -GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
+ L + + LI Y C A+ F A+P K ++W +I Y
Sbjct: 223 LFSAMPLKSPASWNI---LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDV 279
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
+ A +LF LM + ++A+++ + G +DA + F M
Sbjct: 280 QSAEELFRLM----SKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 13/219 (5%)
Query: 163 LKQGKEVHAYALKRRF------LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
L+Q K+VHA + R+ L H T+ +S+ ++ Y R+ G + W
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTL--HFTKEFSR-NIVTYVKRILKGFNGHDSFSW 72
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
++ ++ E + V M + + +T +L CG++ + GK +H Q LK
Sbjct: 73 GCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
G YV L+ +Y G + AK F + +K +++W +L+ Y EA +
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRV 192
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
FD + + ++ ++S + G + +A F M
Sbjct: 193 FDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 134/249 (53%), Gaps = 16/249 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+++I + +RG++ A ++F+ PR++V++W +ISG + NG EAL+ L +E+ K
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF-LCMEKDKS 210
Query: 144 -RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+PN IT++ +LP CA L L+ G+ + YA + F ++ + ++ + MYSKCG+I +
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 203 RLFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
RLF+ + ++N+ W +MI S +G +EAL + M ++ D VT +L C
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC--- 327
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAEL------INMYGACGVFDNAKLVFGAVPDK-GS 314
V G V GQ L VH ++ +L I++ G G A + +P K +
Sbjct: 328 --VHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 315 MTWTALIRA 323
+ W L+ A
Sbjct: 386 VVWGTLLGA 394
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 156/364 (42%), Gaps = 34/364 (9%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
++ L+Q N+ AR++F+ +N +I + P E++ L+ +
Sbjct: 17 DETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFD 76
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCG----- 196
G RP+ T I A + + + +H+ + F ++L+ Y+K G
Sbjct: 77 GLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCA 136
Query: 197 ------------------VIGYSIR--------LFDGMEKKNVILWTAMIDSCVENGFLN 230
+ GY R LFD M +KNV WT +I +NG +
Sbjct: 137 RRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYS 196
Query: 231 EALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
EAL + M+ + + + +T+ +L C L +++G+ + G + GF YV
Sbjct: 197 EALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNAT 256
Query: 290 INMYGACGVFDNAKLVFGAVPDKGSM-TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
I MY CG+ D AK +F + ++ ++ +W ++I + + EA+ LF M+ G P+
Sbjct: 257 IEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPD 316
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
TF +L C G V F M ++I EH M+ LL R GKL EA +
Sbjct: 317 AVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLI 376
Query: 408 EMSP 411
+ P
Sbjct: 377 KTMP 380
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 10/257 (3%)
Query: 165 QGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM-EKKNVILWTAMIDSC 223
G+++HA K F + + +SL+ YS G + Y+ ++FD EK+N++LWTAMI +
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG--FAS 281
EN EA+ + + M+ + D V +T L C +L V++G+E++ + +K A
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF---- 337
+ L+NMY G + A+ +F K T+T++I Y +E+++LF
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 338 --DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHCTFMVQLL 394
D +PN TF VL C +G VE+ R F ++ Y ++ + H MV L
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 395 TRYGKLDEAQRFLEMSP 411
R G L +A F+ P
Sbjct: 323 CRSGHLKDAHEFINQMP 339
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP-RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK 143
+SL+ + G+VD ARQVF+E+P ++++ W AMIS N EA+E + M E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYAL--KRRFLPHVTMVSSLMVMYSKCGVIGYS 201
+ + + V L CA L ++ G+E+++ ++ KRR +T+ +SL+ MY K G +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 202 IRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT------VTLTRML 255
+LFD +K+V +T+MI NG E+L + + M+ Q DT VT +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 256 CVCGELRRVKLGK 268
C V+ GK
Sbjct: 284 MACSHSGLVEEGK 296
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 156/366 (42%), Gaps = 39/366 (10%)
Query: 85 SSLIQLHF-----KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML 139
S+L+ HF N D A +VF +V +NAMI + G P E+L + M
Sbjct: 35 SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMK 94
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
G + T +L C+ L L+ GK VH ++ F + ++ +Y+ G +G
Sbjct: 95 SRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG 154
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSM----------------QLTR 243
+ ++FD M ++NV++W MI ++G + L + + M + R
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 244 QRA---------------DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG-FASVHYVAA 287
R D T+ +L + L + GK +H G F V
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG-CS 346
L++ Y G + A +F + + ++W LI IDLFD M+ G +
Sbjct: 275 ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA 334
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
PN TF VL+ C G VE F LM +++EA EH MV L++R G++ EA +
Sbjct: 335 PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK 394
Query: 406 FLEMSP 411
FL+ P
Sbjct: 395 FLKNMP 400
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 117/235 (49%), Gaps = 8/235 (3%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
G+V+ +F++ RS+ +WN+MIS L+ G REALE M+++G P+ T++ +L
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 155 PICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV 213
PI A L L GK +H+ A F +T+ ++L+ Y K G + + +F M+++NV
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
+ W +I NG + + +M + + + T +L C +V+ G+E+ G
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFG 361
Query: 273 ---QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIRA 323
+ KL + HY A ++++ G A +P + + W +L+ A
Sbjct: 362 LMMERFKLEARTEHYGA--MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++L+ + K G+++ A +F + RR+V +WN +ISG A NG ++ M+EEGK
Sbjct: 274 NALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKV 333
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCGVIGYSI 202
PN T + +L C+ +++G+E+ ++R L T MV + S+ G I +
Sbjct: 334 APNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAF 393
Query: 203 RLFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTR 243
+ M N +W +++ +C +G + LA + +M+L +
Sbjct: 394 KFLKNMPVNANAAMWGSLLSACRSHG--DVKLAEVAAMELVK 433
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG---YSIRLFDGMEKKNVILWTAMIDSCV 224
E+HA+ L R FL ++ L S CG + Y+ R+F ++ NV+++ AMI
Sbjct: 22 EIHAHLL-RHFLHGSNLL--LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYS 78
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
G E+L+ SM+ AD T +L C L ++ GK VHG++++ GF +
Sbjct: 79 LVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGK 138
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAY-------------------G 325
+ ++ +Y + G +A+ VF + ++ + W +IR +
Sbjct: 139 IRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERS 198
Query: 326 YKEWY------------REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
W REA++LF M+ G P+ T VL I G ++
Sbjct: 199 IVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 157/358 (43%), Gaps = 42/358 (11%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K G ++ A ++F++ + + +W MI G EAL Y ML G +P+ + M+
Sbjct: 251 KAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVD 310
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRF-------------------------------LPH 181
+L A+ +G ++H +KR F H
Sbjct: 311 LLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDH 370
Query: 182 VTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQL 241
+ ++L+ + K G++ + +FD K++ W AMI ++ AL + R M
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMIS 430
Query: 242 TRQ-RADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV---HYVAAELINMYGACG 297
+ Q + D +T+ + L ++ GK H L F+++ + A +I+MY CG
Sbjct: 431 SSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY---LNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 298 VFDNAKLVFGAVPDKGSMT---WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEA 354
+ A +F + S T W A+I + A+DL+ + S PN+ TF
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 355 VLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
VLS C AG VE +F+ M S + IE +H MV LL + G+L+EA+ ++ P
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 16/250 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
++LI K G V+ AR+VF+++ + + +WNAMISG A + P+ AL R M+ +
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ ITM+ + + L +L++GK H Y P+ + ++++ MY+KCG I ++
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 204 LF---DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+F + + W A+I +G AL + +Q + +++T +L C
Sbjct: 495 IFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCH 554
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAEL------INMYGACGVFDNAKLVFGAVPDKGS 314
V+LGK + + +K S H + ++ +++ G G + AK + +P K
Sbjct: 555 AGLVELGK-TYFESMK----SDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKAD 609
Query: 315 -MTWTALIRA 323
M W L+ A
Sbjct: 610 VMIWGMLLSA 619
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 145/377 (38%), Gaps = 63/377 (16%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A ++F+ P RS ++ +I G A N EA+E R M G N +T+ ++ C+
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT-- 217
L + + + + A+K + V + ++L+ MY C + + +LFD M ++N++ W
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 218 -----------------------------AMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
MID C+ L+EAL M +
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC------------ 296
V + +L G ++HG ++K GF ++ A +I+ Y
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 297 -------------------GVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G+ + A+ VF DK +W A+I Y + A+ LF
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 338 DLMMSNG-CSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTR 396
M+S+ P+ T +V S G +E+ R D ++ I + ++ + +
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 397 YGKLDEAQRFLEMSPSL 413
G ++ A + ++
Sbjct: 486 CGSIETALNIFHQTKNI 502
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 127/291 (43%), Gaps = 38/291 (13%)
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI--------------- 198
L CA + G+++H LK + + +S++ MY+KC ++
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 199 --------GY--------SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLT 242
GY +++LFD M +++ + +T +I +N +EA+ + R M+
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 243 RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNA 302
+ VTL ++ C L + + + +KL +V+ L++MY C +A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRA 362
+ +F +P++ +TW ++ Y +A +LFD + + ++ ++ C R
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRK 283
Query: 363 GFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSPSL 413
+++A ++ M ++ S+ MV LL+ + + + L++ ++
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSE---VMMVDLLSASARSVGSSKGLQLHGTI 331
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 31/149 (20%)
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC-------GVF-DN 301
L L C V G+++H +VLK G S Y+ ++NMY C VF D+
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 302 AKL-----------------------VFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
AKL +F +P++ +++T LI+ Y + EA++LF
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVED 367
M + G N T V+S C G + D
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWD 191
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 151/329 (45%), Gaps = 42/329 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I+ + K G+V AR +F++ R +WN MI G H +A M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------ 338
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN ++ H++ + MVS Y+ G + +
Sbjct: 339 PN--------------------RDAHSWNM---------MVSG----YASVGNVELARHY 365
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+ +K+ + W ++I + +N EA+ + M + ++ D TLT +L L +
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWTALIRA 323
+LG ++H V+K V V LI MY CG ++ +F + K +TW A+I
Sbjct: 426 RLGMQMHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 324 YGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA-FRFFDLMSTYEIEA 382
Y + EA++LF M SNG P+ TF +VL+ C AG V++A +F +MS Y+IE
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
EH + +V + + G+ +EA + P
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMP 573
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 14/237 (5%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL 154
GNV+LAR FE++P + +WN++I+ N +EA++ M EG++P+ T+ +L
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 155 PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME-KKNV 213
L L+ G ++H +K +P V + ++L+ MYS+CG I S R+FD M+ K+ V
Sbjct: 417 SASTGLVNLRLGMQMHQIVVK-TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV 475
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
I W AMI +G +EAL + SM+ +T +L C L E Q
Sbjct: 476 ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAH---AGLVDEAKAQ 532
Query: 274 ------VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALIRA 323
V K+ HY + L+N+ G F+ A + ++P + W AL+ A
Sbjct: 533 FVSMMSVYKIEPQMEHY--SSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 38/339 (11%)
Query: 92 FKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP--NWIT 149
+ G + AR +FE+ R+ WN MISG RE + +L KR W T
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKR---REMNQARKLFDVMPKRDVVTWNT 107
Query: 150 MMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
M+ C +R L++ +++ R TM+S Y+K IG ++ LF+ M
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISG----YAKNRRIGEALLLFEKMP 163
Query: 210 KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKE 269
++N + W+AMI +NG ++ A+ + R M + D+ L ++ + R+
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAW 219
Query: 270 VHGQVLKL--GFASVHYVAAELINMYGACGVFDNAKLVFGAVPD---------------K 312
V GQ L G + Y LI YG G + A+ +F +PD K
Sbjct: 220 VLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK 279
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
++W ++I+AY A LFD M +T ++ ++ +EDAF F
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALF 335
Query: 373 DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
M + + MV G ++ A+ + E +P
Sbjct: 336 SEMPNRDAHS----WNMMVSGYASVGNVELARHYFEKTP 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 122/317 (38%), Gaps = 83/317 (26%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I + K + A +FE+ P R+ +W+AMI+G NG A+ R M +
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 145 PNWITMMVILP---------ICAKLRTLKQGKE--VHAY--------------------- 172
P + ++ + + +L G+E V+AY
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
Query: 173 ------------ALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI 220
+ RF +V +S++ Y K G + + LFD M+ ++ I W MI
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
D V + +A A+ M ++ H +
Sbjct: 320 DGYVHVSRMEDAFALFSEMP--------------------------NRDAHSWNM----- 348
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
+++ Y + G + A+ F P+K +++W ++I AY + Y+EA+DLF M
Sbjct: 349 --------MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 341 MSNGCSPNTFTFEAVLS 357
G P+ T ++LS
Sbjct: 401 NIEGEKPDPHTLTSLLS 417
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 163/364 (44%), Gaps = 37/364 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI ++ + N+ +AR++F+ R +WNA+I+ A G EA E M G
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 145 PNWIT-----------------------------------MMVILPICAKLRTLKQGKEV 169
+ IT M++ L C+ + ++ GKE+
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFL 229
H A+ + + ++L+ MYSKC + +++ +F E+ ++ W ++I +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG-FASVHYVAAE 288
EA ++R M + + +++TL +L +C + ++ GKE H +L+ F +
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
L+++Y G AK V + + +T+T+LI YG + A+ LF M +G P+
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 349 TFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
T AVLS C + V + R F + Y I +H + MV L R G L +A+ +
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 408 EMSP 411
P
Sbjct: 543 HNMP 546
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 3/245 (1%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N ++LI ++ K ++ A VF ++ S+ WN++ISG A EA +R ML
Sbjct: 316 NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGY 200
G +PN IT+ ILP+CA++ L+ GKE H Y L+R+ TM+ +SL+ +Y+K G I
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 435
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ ++ D M K++ + +T++ID G ALA+ + M + + D VT+ +L C
Sbjct: 436 AKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSH 495
Query: 261 LRRVKLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-MTWT 318
+ V G+ + ++ + G + ++++YG G AK + +P K S TW
Sbjct: 496 SKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWA 555
Query: 319 ALIRA 323
L+ A
Sbjct: 556 TLLNA 560
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 35/307 (11%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A+ + E S WN +I+ A N E + + M+ +G RP+ T +L C +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
+ G+ VH + + + ++L+ MY + +G + RLFD M +++ + W A+
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAV 216
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVT--------------------LTRM----- 254
I+ G +EA + M + +T ++RM
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPT 276
Query: 255 ----------LCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKL 304
L C + ++LGKE+HG + + + V LI MY C +A +
Sbjct: 277 SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALI 336
Query: 305 VFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGF 364
VF + TW ++I Y EA L M+ G PN+ T ++L +C R
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIAN 396
Query: 365 VEDAFRF 371
++ F
Sbjct: 397 LQHGKEF 403
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C +R G +VHA+ + H +V L+ YS + + + + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
+ W +I S +N E +A + M R D T +L CGE V G+ VHG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+ + S YV LI+MY A+ +F + ++ +++W A+I Y + + E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
A +LFD M +G + T+ + C + G A M +
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNF 274
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 41/317 (12%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K +++ AR+ F+ P +SV +WNAM+SG A NGF +AL ML G RPN T ++
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 153 ILPIC-----------------------------------AKLRTLKQGKEV-HAYALKR 176
++ C AK R ++ + + + +R
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 177 RFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM 236
+ M+S Y++ G + + +LFD M K+NV+ W ++I NG A+
Sbjct: 330 NLVTWNAMISG----YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 237 RSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
M + D VT+ +L CG + ++LG + + K LI MY
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYAR 445
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
G AK VF + ++ +++ L A+ E ++L M G P+ T+ +V
Sbjct: 446 GGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSV 505
Query: 356 LSICDRAGFVEDAFRFF 372
L+ C+RAG +++ R F
Sbjct: 506 LTACNRAGLLKEGQRIF 522
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 105/191 (54%), Gaps = 1/191 (0%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+++I + + G++ ARQ+F+ P+R+V +WN++I+G AHNG A+E+ M++ G
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
+P+ +TM+ +L C + L+ G + Y K + + + SL+ MY++ G + + R
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD M++++V+ + + + NG E L ++ M+ D VT T +L C
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Query: 264 VKLGKEVHGQV 274
+K G+ + +
Sbjct: 515 LKEGQRIFKSI 525
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 151/329 (45%), Gaps = 20/329 (6%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
++ ++ K +V+ AR+VF++ +R S WN MISG G EA + +M E +
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----D 197
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVS--SLMVMYSKCGVIGYSIRL 204
++ V++ AK++ L+ ++ +P ++VS +++ Y++ G ++RL
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDR------MPEKSVVSWNAMLSGYAQNGFTEDALRL 251
Query: 205 FDGM----EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
F+ M + N W +I +C + ++++ + R R + T +L + +
Sbjct: 252 FNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAK 311
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTAL 320
R ++ + + + LG +I+ Y G +A+ +F +P + ++W +L
Sbjct: 312 CRDIQSARRIFNE---LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCS-PNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYE 379
I Y + AI+ F+ M+ G S P+ T +VLS C +E D + +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 380 IEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
I+ + ++ + R G L EA+R +
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFD 457
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 128/280 (45%), Gaps = 34/280 (12%)
Query: 166 GKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVE 225
G VHA+++K FL + + +L+ MY KC + ++ +LFD + ++N ++W AMI
Sbjct: 67 GGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 226 NGFLNEALAVMRSMQLT---------------------------------RQRADTVTLT 252
G + EA+ + +M + R + + +TL
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 253 RMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
++ C + +L KE+H + + + L+ YG CG +LVF ++ D+
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
+ W++LI AY A+ F M +P+ F VL C AG ++A +F
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 373 DLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
M Y + ASK+H + +V +L+R G+ +EA + ++ P
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 137/306 (44%), Gaps = 42/306 (13%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-------------- 131
+L+ ++ K +V AR++F+E P+R+ WNAMIS H G +EA
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 132 -------------------LEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAY 172
+E+ R M+E +PN IT++ ++ C+ + + KE+H+Y
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSY 207
Query: 173 ALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEA 232
A + PH + S L+ Y +CG I Y +FD ME ++V+ W+++I + +G A
Sbjct: 208 AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESA 267
Query: 233 LAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLG----KEVHGQVLKLGFASVHYVAAE 288
L + M+L + D + +L C K + G L + HY
Sbjct: 268 LKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD-YGLRASKDHYSC-- 324
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSM-TWTALIRA-YGYKEWYREAIDLFDLMMSNGCS 346
L+++ G F+ A V A+P+K + TW AL+ A Y E I +L+M +
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPEN 384
Query: 347 PNTFTF 352
P +
Sbjct: 385 PANYVL 390
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 247 DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF 306
D + L C R LG VH +K F S +V L++MYG C +A+ +F
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 307 GAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
+P + ++ W A+I Y + +EA++L++ M PN +F A++
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAII 153
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 149/340 (43%), Gaps = 32/340 (9%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A +F + ++ +N +I + P +A + ML+ P+ IT ++ ++
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF-------------- 205
+ + G++ H+ ++ F V + +SL+ MY+ CG I + R+F
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 206 -----------------DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
D M +N+ W+ MI+ +N +A+ + M+ A+
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 249 VTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGA 308
+ ++ C L ++ G+ + V+K + L++M+ CG + A VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 309 VPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA 368
+P+ S++W+++I+ +A+ F M+S G P TF AVLS C G VE
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 369 FRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
++ M + IE EH +V +L R GKL EA+ F+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI 409
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S++ + K G V+ AR++F+E P R++ W+ MI+G A N +A++ M EG
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N M+ ++ CA L L+ G+ + Y +K ++ + ++L+ M+ +CG I +I +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
F+G+ + + + W+++I +G ++A+ M VT T +L C V
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 265 KLGKEVHGQVLK 276
+ G E++ + K
Sbjct: 367 EKGLEIYENMKK 378
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVM------YSK-CGVIGYSIR 203
+ +L C+ LK +H + L+ + V + S L+ + ++K ++GY+
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F ++ N+ ++ +I ++A M +R D +T ++ E+
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYG----------------------------- 294
V +G++ H Q+++ GF + YV L++MY
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 295 --ACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTF 352
CG+ +NA+ +F +P + TW+ +I Y + +AIDLF+ M G N
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 353 EAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+V+S C G +E R ++ + + + T +V + R G +++A E P
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 150/319 (47%), Gaps = 7/319 (2%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML---EEGKRPNWITMMVILPI 156
A +F+ + ++ MI + + P L Y LM+ EE P+++T ++
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 157 CAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL 215
C K GK++H + +K FL + + ++ +Y + ++ + ++FD + + +V+
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 216 WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVL 275
W +++ V G +E L V + M + D ++T L C ++ + GK +H V
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 276 KLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
K + S +V L++MY CG + A VF + + +W ALI Y + ++A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 335 DLFD-LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQ 392
D + +G P++ VL+ C GF+E+ + M + Y I EH + +V
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVD 365
Query: 393 LLTRYGKLDEAQRFLEMSP 411
L+ R G+LD+A +E P
Sbjct: 366 LMCRAGRLDDALDLIEKMP 384
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 4/228 (1%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR+VF+E P+ V W+ +++G G E LE + ML G P+ ++ L CA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMV-MYSKCGVIGYSIRLFDGMEKKNVILWTA 218
+ L QGK +H + K+R++ V + +V MY+KCG I ++ +F+ + ++NV W A
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 219 MIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCVCGELRRVKLGKE-VHGQVLK 276
+I G+ +A + ++ + D+V L +L C ++ G+ + +
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG-SMTWTALIRA 323
G H + ++++ G D+A + +P K + W AL+
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYV-RLMLEEGK 143
++L+ ++ K G ++ A +VFE+ RR+V +W A+I G A G+ ++A + R+ E+G
Sbjct: 258 TALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGI 317
Query: 144 RPNWITMMVILPICAKLRTLKQGKE-VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P+ + ++ +L CA L++G+ + + P S ++ + + G + ++
Sbjct: 318 KPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDAL 377
Query: 203 RLFDGMEKKNVI-LWTAMIDSC 223
L + M K + +W A+++ C
Sbjct: 378 DLIEKMPMKPLASVWGALLNGC 399
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 160/357 (44%), Gaps = 36/357 (10%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR-P 145
LI L+ K G + L+RQ+F+ P+R ++N+MI G G A E LM E K
Sbjct: 162 LIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLI 221
Query: 146 NWITMMV-------ILPICAKLRT-----------------LKQGKEVHAYAL-----KR 176
+W +M+ + I +KL +K G+ A L +R
Sbjct: 222 SWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR 281
Query: 177 RFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVM 236
+ TM+ Y+K G + ++ LFD M ++V+ + +M+ V+N + EAL +
Sbjct: 282 DVVTWATMIDG----YAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIF 337
Query: 237 RSMQL-TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
M+ + D TL +L +L R+ ++H +++ F + LI+MY
Sbjct: 338 SDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSK 397
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV 355
CG +A LVF + +K W A+I A D+ + P+ TF V
Sbjct: 398 CGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGV 457
Query: 356 LSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
L+ C +G V++ F+LM ++IE +H MV +L+R G ++ A+ +E P
Sbjct: 458 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 150/303 (49%), Gaps = 10/303 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+++I + K G V A+ +F++ P R V A+N+M++G N + EALE M +E
Sbjct: 287 ATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL 346
Query: 145 -PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIR 203
P+ T++++LP A+L L + ++H Y ++++F + +L+ MYSKCG I +++
Sbjct: 347 LPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAML 406
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+F+G+E K++ W AMI +G A ++ ++ + D +T +L C
Sbjct: 407 VFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGL 466
Query: 264 VKLGK---EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTA 319
VK G E+ + K+ HY ++++ G + AK + +P + + W
Sbjct: 467 VKEGLLCFELMRRKHKIEPRLQHY--GCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRT 524
Query: 320 LIRAYG-YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
+ A +KE+ + L++ G +P+++ + ++ G +D R +M
Sbjct: 525 FLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS--NMYASFGMWKDVRRVRTMMKER 582
Query: 379 EIE 381
+IE
Sbjct: 583 KIE 585
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 15/252 (5%)
Query: 98 DLARQVFEESPRRSVS--------AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWIT 149
D AR VF E S S WNA+I +H PR+AL + LMLE G + +
Sbjct: 64 DFARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFS 123
Query: 150 MMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
+ ++L C++L +K G ++H + K + + + L+ +Y KCG +G S ++FD M
Sbjct: 124 LSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 183
Query: 210 KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR-VKLGK 268
K++ + + +MID V+ G + A + M + + + ++ M+ + V +
Sbjct: 184 KRDSVSYNSMIDGYVKCGLIVSARELFDLMPM--EMKNLISWNSMISGYAQTSDGVDIAS 241
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
++ + + S + +I+ Y G ++AK +F +P + +TW +I Y
Sbjct: 242 KLFADMPEKDLISWN----SMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLG 297
Query: 329 WYREAIDLFDLM 340
+ A LFD M
Sbjct: 298 FVHHAKTLFDQM 309
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 170/401 (42%), Gaps = 77/401 (19%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+S++ + + G+V A ++F E P R++ +W AMISG A N REAL L LE K
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL---MLFLEMKKD 291
Query: 144 ----RPNWITMMVILPICAKLRT--LKQGKEVHAYALKRRF--LPHVT-MVSSLMVMYSK 194
PN T++ + C L + G+++HA + + + H + SL+ MY+
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 195 CGVIGYSIRLFD---GMEKKNVIL---------------------------WTAMIDSCV 224
G+I + L + ++ N+I+ WT+MID +
Sbjct: 352 SGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL 411
Query: 225 ENGFLNEALAVMRSMQLTRQRADTV-------------------------------TLTR 253
E G ++ A + + + TV T +
Sbjct: 412 EAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSV 471
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLG--FASVHYVAAELINMYGACGVFDNAKLVFGAVPD 311
+L G + GK +H + K + + L++MY CG ++A +F +
Sbjct: 472 LLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 312 KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRF 371
K +++W ++I + +A++LF M+ +G PN+ TF VLS C +G +
Sbjct: 532 KDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 372 FDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
F M TY I+ +H M+ LL R GKL EA+ F+ P
Sbjct: 592 FKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 56/231 (24%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + G+++ A+QVF+ P R V +WNAMI G N + +E +L+ +
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEN----DGMEEAKLLFGDMSE 228
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +T +S++ Y + G + + RL
Sbjct: 229 KNVVTW-----------------------------------TSMVYGYCRYGDVREAYRL 253
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTV-----TLTRMLCVCG 259
F M ++N++ WTAMI N EAL + M ++ D V TL + CG
Sbjct: 254 FCEMPERNIVSWTAMISGFAWNELYREALMLFLEM---KKDVDAVSPNGETLISLAYACG 310
Query: 260 ----ELRRVKLGKEVHGQVLKLGFASVHY---VAAELINMYGACGVFDNAK 303
E RR LG+++H QV+ G+ +V + +A L++MY + G+ +A+
Sbjct: 311 GLGVEFRR--LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 54/283 (19%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL+ + K G +D AR +FE P R++ NAM++G EA R M +
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK--NV 138
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
+W M+ L C R+ + E+ +R + T+V+ L+ + G + + ++
Sbjct: 139 VSWTVMLTAL--CDDGRS-EDAVELFDEMPERNVVSWNTLVTGLI----RNGDMEKAKQV 191
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M ++V+ W AMI +EN + EA + M + VT T M+
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMV--------- 238
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGAC--GVFDNAKLVFGAVPDKGSMTWTALIR 322
YG C G A +F +P++ ++WTA+I
Sbjct: 239 ----------------------------YGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 323 AYGYKEWYREAIDLFDLMMS--NGCSPNTFTFEAVLSICDRAG 363
+ + E YREA+ LF M + SPN T ++ C G
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 18/218 (8%)
Query: 160 LRTLKQGKEVHAYAL-----KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI 214
LR L +G VHA L +R + V +SL+ Y+K G + + LF+ M ++N++
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
AM+ V+ +NEA + R M + V+ T ML + R + E+ ++
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
+ S + + LI G + AK VF A+P + ++W A+I+ Y + EA
Sbjct: 165 PERNVVSWNTLVTGLIRN----GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
LF M N T+ +++ R G V +A+R F
Sbjct: 221 LLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLF 254
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 170/390 (43%), Gaps = 66/390 (16%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SL++ + +++ A +VF+E P V +WN+++SG +G +E + +
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLP-HVTMVSSLMVMYSKCGVIGYSIR 203
PN + L CA+L G +H+ +K +V + + L+ MY KCG + ++
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 204 LFDGMEKKNVILWTA-------------------------------MIDSCVENGFLNEA 232
+F ME+K+ + W A +ID+ V++G N A
Sbjct: 214 VFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNA 273
Query: 233 LAVMRSM-------------------------------QLTRQRADTVTLTRMLCVCGEL 261
V+ M + R D +L+ +L L
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAAL 333
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
V G +H KLG S VA+ LI+MY CG+ +A+L+F +P K + W +I
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMI 393
Query: 322 RAYGYKEWYREAIDLFD-LMMSNGCSPNTFTFEAVLSICDRAGF-VEDAFRFFDLM-STY 378
Y EAI LF+ L P+ FTF +L++C +E +F++M + Y
Sbjct: 394 SGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEY 453
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
I+ S EHC +++ + + G++ +A++ ++
Sbjct: 454 RIKPSVEHCCSLIRAMGQRGEVWQAKQVIQ 483
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 12/269 (4%)
Query: 111 SVSAWNAMISGLAHNG---FPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGK 167
S ++W+ ++ LA G R A+E ++ +G++P+ ++ +L + + +
Sbjct: 20 SSNSWSTIVPALARFGSIGVLRAAVE----LINDGEKPDASPLVHLLRVSGNYGYVSLCR 75
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
++H Y K F+ + + +SLM Y + + ++FD M +VI W +++ V++G
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
E + + + + + + T L C L LG +H +++KLG + V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 288 E-LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
LI+MYG CG D+A LVF + +K +++W A++ + + F M +
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP----N 251
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
P+T T+ ++ ++G +AF+ M
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 115 WNAMISGLAHN--GFPREALEYVRLMLEEGK-RPNWITMMVILPICAKLRTLKQGKEVHA 171
WN +I + HN R + V L + + P++ T +LP L G+ HA
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 172 YALKRRFLPHVTMVSSLMVMYSKC-------------------------------GVIGY 200
L + +SL+ MYS C G+I
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-----RADTVTLTRML 255
+ +LFD M ++NVI W+ +I+ V G EAL + R MQL + R + T++ +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
CG L ++ GK VH + K + LI+MY CG + AK VF A+ K +
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 316 -TWTALIRAYGYKEWYREAIDLF-DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
++A+I E LF ++ S+ +PN+ TF +L C G + + +F
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 374 LM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+M + I S +H MV L R G + EA+ F+ P
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLML----- 139
+S++ + K G +D AR++F+E P R+V +W+ +I+G G +EAL+ R M
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
E RPN TM +L C +L L+QGK VHAY K + + ++L+ MY+KCG +
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 200 YSIRLFDGM-EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCV 257
+ R+F+ + KK+V ++AMI G +E + M + ++VT +L
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 258 CGELRRVKLGKEVHGQVL-KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSM 315
C + GK ++ + G ++++YG G+ A+ ++P + +
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 316 TWTALI 321
W +L+
Sbjct: 372 IWGSLL 377
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 40/255 (15%)
Query: 191 MYSKCGVIGYSIRLFDGMEKK-NVILWTAMIDSCVEN---GFLNEALAVMRSMQLTRQRA 246
M +I Y+ +F K LW +I + V N + ++V M+ R
Sbjct: 1 MSKGAAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP 60
Query: 247 DTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGAC---------- 296
D T +L + LG+ H Q+L G +V L+NMY +C
Sbjct: 61 DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF 120
Query: 297 ---------------------GVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAID 335
G+ D+A+ +F +P++ ++W+ LI Y Y+EA+D
Sbjct: 121 DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD 180
Query: 336 LFDLMM-----SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
LF M PN FT VLS C R G +E + Y +E T +
Sbjct: 181 LFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTAL 240
Query: 391 VQLLTRYGKLDEAQR 405
+ + + G L+ A+R
Sbjct: 241 IDMYAKCGSLERAKR 255
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 125/237 (52%), Gaps = 14/237 (5%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N +SLI ++ + ++ A VF++ S+S WN++ISG A+N E ++ ML
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGY 200
G PN IT+ ILP+ A++ L+ GKE H Y L+R+ + + + +SL+ MY+K G I
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 477
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ R+FD M K++ + +T++ID G ALA + M + + D VT+ +L C
Sbjct: 478 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 537
Query: 261 LRRVKLG-------KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
V+ G + V G L+L HY ++++Y G D A+ +F +P
Sbjct: 538 SNLVREGHWLFTKMEHVFGIRLRLE----HYSC--MVDLYCRAGYLDKARDIFHTIP 588
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 156/366 (42%), Gaps = 39/366 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM------ 138
++LI ++ + G VD+AR++F+ R +WNA+I+ EA + + M
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 139 -------------LEEGK----------------RPNWITMMVILPICAKLRTLKQGKEV 169
LE G R + M+ L C+ + LK GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 170 HAYALKRRFLPHV--TMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
H ++ H + +SL+ MYS+C + ++ +F +E ++ W ++I N
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK-LGFASVHYVA 286
E +++ M L+ + +TL +L + + ++ GKE H +L+ + +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
L++MY G AK VF ++ + +T+T+LI YG A+ F M +G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
P+ T AVLS C + V + F M + I EH + MV L R G LD+A+
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 406 FLEMSP 411
P
Sbjct: 583 IFHTIP 588
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 37/312 (11%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
+D A+ + E S WN +I N +E++ + M+ +G R + T ++
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
CA L G+ VH ++ + ++L+ MY + G + + RLFD M +++ + W
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 217 TAMID-----------------------------------SCVENGFLNEALAVMRSMQL 241
A+I+ C+E G AL + M+
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK-LGFA-SVHYVAAELINMYGACGVF 299
R +V + L C + +K GK H V++ F+ + V LI MY C
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 300 DNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+A +VF V TW ++I + Y E E L M+ +G PN T ++L +
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 360 DRAGFVEDAFRF 371
R G ++ F
Sbjct: 434 ARVGNLQHGKEF 445
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C G+++HA+ + +V L+ YS ++ + + + E +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
+ W +I S + N E+++V + M RAD T ++ C L G+ VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+ YV LI+MY G D A+ +F + ++ +++W A+I Y +E E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
A L D M +G + T+ + C AG
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 18/196 (9%)
Query: 223 CVENGFLNEALAVMRSMQLTRQRADT-----VTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
C+ +G L EA R+ L R ++ + + +L C G+++H +
Sbjct: 56 CISHGQLYEAF---RTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G + +L+ Y A + D A+ + + W LI +Y + ++E++ ++
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF-----MVQ 392
MMS G + FT+ +V+ C A ++ A+ + IE S C ++
Sbjct: 173 KRMMSKGIRADEFTYPSVIKAC--AALLDFAY---GRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 393 LLTRYGKLDEAQRFLE 408
+ R+GK+D A+R +
Sbjct: 228 MYKRFGKVDVARRLFD 243
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 125/237 (52%), Gaps = 14/237 (5%)
Query: 82 NDPSSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
N +SLI ++ + ++ A VF++ S+S WN++ISG A+N E ++ ML
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRR-FLPHVTMVSSLMVMYSKCGVIGY 200
G PN IT+ ILP+ A++ L+ GKE H Y L+R+ + + + +SL+ MY+K G I
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIA 477
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
+ R+FD M K++ + +T++ID G ALA + M + + D VT+ +L C
Sbjct: 478 AKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSH 537
Query: 261 LRRVKLG-------KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
V+ G + V G L+L HY ++++Y G D A+ +F +P
Sbjct: 538 SNLVREGHWLFTKMEHVFGIRLRLE----HYSC--MVDLYCRAGYLDKARDIFHTIP 588
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 156/366 (42%), Gaps = 39/366 (10%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLM------ 138
++LI ++ + G VD+AR++F+ R +WNA+I+ EA + + M
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 139 -------------LEEGK----------------RPNWITMMVILPICAKLRTLKQGKEV 169
LE G R + M+ L C+ + LK GK
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVF 342
Query: 170 HAYALKRRFLPHV--TMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
H ++ H + +SL+ MYS+C + ++ +F +E ++ W ++I N
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK-LGFASVHYVA 286
E +++ M L+ + +TL +L + + ++ GKE H +L+ + +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
L++MY G AK VF ++ + +T+T+LI YG A+ F M +G
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 347 PNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQR 405
P+ T AVLS C + V + F M + I EH + MV L R G LD+A+
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 406 FLEMSP 411
P
Sbjct: 583 IFHTIP 588
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 37/312 (11%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
+D A+ + E S WN +I N +E++ + M+ +G R + T ++
Sbjct: 134 LDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKA 193
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
CA L G+ VH ++ + ++L+ MY + G + + RLFD M +++ + W
Sbjct: 194 CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSW 253
Query: 217 TAMID-----------------------------------SCVENGFLNEALAVMRSMQL 241
A+I+ C+E G AL + M+
Sbjct: 254 NAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRN 313
Query: 242 TRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK-LGFA-SVHYVAAELINMYGACGVF 299
R +V + L C + +K GK H V++ F+ + V LI MY C
Sbjct: 314 CNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Query: 300 DNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSIC 359
+A +VF V TW ++I + Y E E L M+ +G PN T ++L +
Sbjct: 374 RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLF 433
Query: 360 DRAGFVEDAFRF 371
R G ++ F
Sbjct: 434 ARVGNLQHGKEF 445
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN 212
+L C G+++HA+ + +V L+ YS ++ + + + E +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
+ W +I S + N E+++V + M RAD T ++ C L G+ VHG
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYRE 332
+ YV LI+MY G D A+ +F + ++ +++W A+I Y +E E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 333 AIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
A L D M +G + T+ + C AG
Sbjct: 269 AFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 85/196 (43%), Gaps = 18/196 (9%)
Query: 223 CVENGFLNEALAVMRSMQLTRQRADT-----VTLTRMLCVCGELRRVKLGKEVHGQVLKL 277
C+ +G L EA R+ L R ++ + + +L C G+++H +
Sbjct: 56 CISHGQLYEAF---RTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 278 GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
G + +L+ Y A + D A+ + + W LI +Y + ++E++ ++
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVY 172
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF-----MVQ 392
MMS G + FT+ +V+ C A ++ A+ + IE S C ++
Sbjct: 173 KRMMSKGIRADEFTYPSVIKAC--AALLDFAY---GRVVHGSIEVSSHRCNLYVCNALIS 227
Query: 393 LLTRYGKLDEAQRFLE 408
+ R+GK+D A+R +
Sbjct: 228 MYKRFGKVDVARRLFD 243
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 158/335 (47%), Gaps = 10/335 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ +I + G VD A ++F ++ +NA+++G NG +AL+ ML+ G
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
++ + C + K +++H + +K + + ++L+ M ++C + + +
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 205 FDGMEKK--NVILWTAMIDSCVENGFLNEALAVM-RSMQLTRQRADTVTLTRMLCVCGEL 261
FD + T++I NG ++A+++ R++ + D V+LT +L VCG L
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALI 321
++G ++H LK G+ S + LI+MY C D+A +F + + ++W +LI
Sbjct: 535 GFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLI 594
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI-----CDRAGFVEDAFRFFDLMS 376
Y + EA+ L+ M P+ T V+S ++ D F + +
Sbjct: 595 SCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL--FLSMKT 652
Query: 377 TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
Y+IE + EH T V++L +G L+EA+ + P
Sbjct: 653 IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMP 687
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 14/298 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG-K 143
++LI + K G A VF +V ++ A+ISG + EAL+ M + G
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 144 RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSK-----CGVI 198
+PN T + IL C ++ G ++H +K FL V + +SLM +Y K C +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 199 GYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQ-RADTVTLTRMLCV 257
++LFD + +++V W ++ S V+ G ++A + M D+ TL+ +L
Sbjct: 238 ---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
C + + G+E+HG+ +++G V LI Y + ++ + + ++T+
Sbjct: 295 CTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTF 354
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
T +I AY A+++F +N NT T+ A+++ R G A + F M
Sbjct: 355 TEMITAYMSFGMVDSAVEIF----ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 39/335 (11%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
+N +I G + +L ML +PN +T ++ ++ G +H AL
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 175 KRRFL-------------------------------PHVTMVSSLMVMYSKCGVIGYSIR 203
KR FL P V +SL+ + G + Y+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA----DTVTLTRMLCVCG 259
F M +V+ WT +I+ + G +AL V M + +RA + T +L C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEATFVSVLSSCA 232
Query: 260 ELRR--VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
+ ++LGK++HG V+ + L++MYG G + A +F + DK W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMS 376
A+I A ++A+++F++M S+ PN T A+L+ C R+ V+ + F + S
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 377 TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
Y+I + EH +V L+ R G L +A F++ P
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLP 387
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGK- 143
+SL+ + G +D A + F+ P V +W +I+G + G +AL M++ +
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 144 --RPNWITMMVILPICAKLRT--LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
PN T + +L CA ++ GK++H Y + + + T+ ++L+ MY K G +
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
++ +FD + K V W A+I + NG +AL + M+ + + +TL +L C
Sbjct: 276 MALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA 335
Query: 260 ELRRVKLGKEVHGQV---LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
+ V LG ++ + K+ S HY ++++ G G+ +A ++P
Sbjct: 336 RSKLVDLGIQLFSSICSEYKIIPTSEHY--GCVVDLIGRAGLLVDAANFIQSLP 387
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPRE---ALEYVRLMLEEGK---RPNWITMMVI 153
A + + P SV +N +IS + N + A +L RPN T +
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 154 LPICA-KLRTLKQGKEVHAYALKRRFLPHVT----MVSSLMVMYSKCGVIGYSIRLFDGM 208
+ + G+ +HA+ LK FL V + ++L+ Y+ CG + + LF+ +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERI 176
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
+ ++ W ++ + + ++ V+ + R + ++L ++ C L G
Sbjct: 177 REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGV 236
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
H VLK +V LI++Y CG A+ VF + + + A+IR
Sbjct: 237 WAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHG 296
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHC 387
+ +E I+L+ ++S G P++ TF +S C +G V++ + F+ M + Y IE EH
Sbjct: 297 FGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHY 356
Query: 388 TFMVQLLTRYGKLDEAQRFLEMSP 411
+V LL R G+L+EA+ ++ P
Sbjct: 357 GCLVDLLGRSGRLEEAEECIKKMP 380
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 6/241 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ + G + AR +FE ++ WN +++ A++ E + L + R
Sbjct: 154 AALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR 213
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN ++++ ++ CA L +G H Y LK + + +SL+ +YSKCG + ++ ++
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 205 FDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
FD M +++V + AMI +GF E + + +S+ D+ T + C V
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 265 KLGKEVHGQ---VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-WTAL 320
G ++ V + HY L+++ G G + A+ +P K + T W +
Sbjct: 334 DEGLQIFNSMKAVYGIEPKVEHYGC--LVDLLGRSGRLEEAEECIKKMPVKPNATLWRSF 391
Query: 321 I 321
+
Sbjct: 392 L 392
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+SLI L+ K G + AR+VF+E +R VS +NAMI GLA +GF +E +E + ++ +G
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLV 314
Query: 145 PNWITMMVILPICAKLRTLKQGKEVH-----AYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
P+ T +V + C+ + +G ++ Y ++ P V L+ + + G +
Sbjct: 315 PDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE----PKVEHYGCLVDLLGRSGRLE 370
Query: 200 YSIRLFDGME-KKNVILWTAMIDSCVENG 227
+ M K N LW + + S +G
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHG 399
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 150/327 (45%), Gaps = 10/327 (3%)
Query: 83 DPSSLIQLHFKR-------GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYV 135
+PS L+ H +R GN+ A + F+E R V +N +ISG + G A+E
Sbjct: 41 NPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELY 100
Query: 136 RLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC 195
M+ G R + T +L +C+ ++G +VH + F ++ + S+L+ +Y+
Sbjct: 101 AEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACL 160
Query: 196 GVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
++ +++LFD M +N+ + ++ + G V M+L + +T M+
Sbjct: 161 RLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMI 220
Query: 256 CVCGELRRVKLGKEVHGQVLKLGF-ASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS 314
C R V GK++H V+K G+ S +VA L++ Y ACG + F AVP+K
Sbjct: 221 RGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDV 280
Query: 315 MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDL 374
++W +++ +++DLF M G P+ F + L+ C R ++ +
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 375 MSTYEIEASKEHCTFMVQLLTRYGKLD 401
+ + S H L+ YGK +
Sbjct: 341 VLKMGFDVSSLH--VQSALIDMYGKCN 365
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 12/329 (3%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
L+ + G++ + + F P + V +WN+++S A G ++L+ M GKRP+
Sbjct: 255 LVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPS 314
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRF-LPHVTMVSSLMVMYSKCGVIGYSIRLF 205
M L C++ ++ GK++H Y LK F + + + S+L+ MY KC I S L+
Sbjct: 315 IRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLY 374
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+ N+ +++ S + G + + + M D VTL+ +L + +
Sbjct: 375 QSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL----KALSLS 430
Query: 266 LGKEVHGQVL------KLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTA 319
L + +H L K G+A+ V+ LI+ Y G + ++ VF + T+
Sbjct: 431 LPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTS 490
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTY 378
+I Y + + + M P+ T +VLS C +G VE+ FD L S Y
Sbjct: 491 IINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY 550
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
I ++ MV LL R G +++A+R L
Sbjct: 551 GISPGRKLYACMVDLLGRAGLVEKAERLL 579
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 120/243 (49%), Gaps = 4/243 (1%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+LI ++ K ++ + +++ P ++ N++++ L H G ++ +E LM++EG
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 145 PNWITMMVILPICAKL--RTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+ +T+ +L + +L VH A+K + V + SL+ Y+K G S
Sbjct: 415 IDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSR 474
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
++FD ++ N+ T++I+ NG + + ++R M D VT+ +L C
Sbjct: 475 KVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSG 534
Query: 263 RVKLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNA-KLVFGAVPDKGSMTWTAL 320
V+ G+ + + K G + + A ++++ G G+ + A +L+ A D + W++L
Sbjct: 535 LVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSL 594
Query: 321 IRA 323
+++
Sbjct: 595 LQS 597
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 32/316 (10%)
Query: 128 PREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSS 187
P++AL + +L G P+ T + ++ K + GK H A+K + + +S
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 188 LMVMYSKCG----------------------VIGYSIR---------LFDGMEKKNVILW 216
LM MY+ CG +I +R LFD M KN+I W
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
MI + + ++++ R M + + TL +L CG R+K G+ VH +++
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
S + LI+MYG C A+ +F ++ + +TW +I A+ ++L
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLEL 338
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLT 395
F+ M++ P+ TF VL C RAG V ++ LM ++I+ + H M L +
Sbjct: 339 FEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 396 RYGKLDEAQRFLEMSP 411
G +EA+ L+ P
Sbjct: 399 SAGFPEEAEEALKNLP 414
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 15/249 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I + G+V A ++F+E P +++ +WN MIS P ++ R M+ G +
Sbjct: 188 NSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQ 247
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL-PHVTMVSSLMVMYSKCGVIGYSIR 203
N T++++L C + LK+G+ VHA +L R FL V + ++L+ MY KC +G + R
Sbjct: 248 GNESTLVLLLNACGRSARLKEGRSVHA-SLIRTFLNSSVVIDTALIDMYGKCKEVGLARR 306
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
+FD + +N + W MI + +G L + +M R D VT +LC C
Sbjct: 307 IFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGL 366
Query: 264 VKLGKEVHGQV-----LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----S 314
V G+ + + +K F +A N+Y + G + A+ +PD+ S
Sbjct: 367 VSQGQSYYSLMVDEFQIKPNFGHQWCMA----NLYSSAGFPEEAEEALKNLPDEDVTPES 422
Query: 315 MTWTALIRA 323
W L+ +
Sbjct: 423 TKWANLLSS 431
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 120 SGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI--------------CAKLRTLKQ 165
S + + RE +E +R ++ G +++ P+ CA+ R L
Sbjct: 18 SSVLPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLD 77
Query: 166 GKEVHAYALKRRFL--PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSC 223
G +H + L + +V + + L+ MY+KCG I Y+ ++FD M ++NV+ WTA+I
Sbjct: 78 GINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGY 137
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH 283
V+ G E + SM L+ + TL+ +L C R + GK+VHG LKLG
Sbjct: 138 VQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSI 192
Query: 284 YVAAELINMYGAC---GVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
YVA +I+MYG C A VF A+ K +TW ++I A+ ++AI +F M
Sbjct: 193 YVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM 252
Query: 341 MSNGCSPNTFTFEAVLSIC 359
S+G F +L+IC
Sbjct: 253 HSDGVG---FDRATLLNIC 268
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 29/295 (9%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPN 146
LI ++ K GN+ ARQVF+ P R+V +W A+I+G G +E ML PN
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC-FPN 160
Query: 147 WITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKC--GVIGY-SIR 203
T+ +L C + GK+VH ALK + + ++++ MY +C G Y +
Sbjct: 161 EFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWT 216
Query: 204 LFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTR--MLCVCGEL 261
+F+ ++ KN++ W +MI + +A+ V R +D V R +L +C L
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGV-----FMRMHSDGVGFDRATLLNICSSL 271
Query: 262 RR---------VKLGKEVHGQVLKLGFASVHYVAAELINMYGAC--GVFDNAKLVFGAVP 310
+ K ++H +K G + VA LI +Y D KL
Sbjct: 272 YKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSH 331
Query: 311 DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFV 365
+ + W +I A+ + R AI LF + SP+ +TF +VL C AG V
Sbjct: 332 CRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLV 383
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 8/228 (3%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
D + E S R + AWN +I+ A P A+ + +E P+W T +L
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILW 216
CA L T + +HA +K FL + +SL+ Y+KCG + +R+FD M+ ++V+ W
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 217 TAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLK 276
+M+ + +G ++ L V + M + D+ T +L C RV+ G + + +
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFE 495
Query: 277 L--GFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALI 321
+++ A +I+M F A+ V +P D ++ W AL+
Sbjct: 496 KPETLPQLNHYAC-VIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 143/324 (44%), Gaps = 19/324 (5%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
A VFE +++ WN+MI+ ++A+ M +G + T++ I K
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 160 LRTLKQGK------EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS--IRLFDGMEK- 210
L + ++H+ +K + + ++L+ +YS+ + Y+ +LF M
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LEDYTDCYKLFMEMSHC 332
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQR--ADTVTLTRMLCVCGELRRVKLGK 268
++++ W +I + + A+ QL +++ D T + +L C L +
Sbjct: 333 RDIVAWNGIITAF---AVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHAL 389
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKE 328
+H QV+K GF + + LI+ Y CG D VF + + ++W ++++AY
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF-DLMSTYEIEASKEHC 387
+ +F M N P++ TF A+LS C AG VE+ R F + E H
Sbjct: 450 QVDSILPVFQKMDIN---PDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 388 TFMVQLLTRYGKLDEAQRFLEMSP 411
++ +L+R + EA+ ++ P
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMP 530
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
Query: 174 LKRRFL-------PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVEN 226
L RR L P V ++ ++ K G G + ++ +NVI W MI V N
Sbjct: 83 LARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRN 142
Query: 227 GFLNEALAVMRSM-QLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
EAL +++M T + + + L C L + K VH ++ G +
Sbjct: 143 VQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAIL 202
Query: 286 AAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
++ L+++Y CG ++ VF +V W A+I + EAI +F M +
Sbjct: 203 SSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Query: 346 SPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
SP++ TF +L+ C G +E+ +F LMS + I+ EH MV LL R G++ EA
Sbjct: 263 SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAY 322
Query: 405 RFLEMSP 411
+E P
Sbjct: 323 ELIESMP 329
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE-EGKRP 145
+I+ K G LA++V + ++V WN MI G N EAL+ ++ ML +P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
N + L CA+L L K VH+ + + + S+L+ +Y+KCG IG S +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 206 DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
+++ +V +W AMI +G EA+ V M+ D++T +L C ++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 266 LGKEVHG---QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-DKGSMTWTALI 321
GKE G + + HY A ++++ G G A + ++P + + W +L+
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGA--MVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 322 RA 323
+
Sbjct: 342 SS 343
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 7/174 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
S+L+ ++ K G++ +R+VF R VS WNAMI+G A +G EA+ M E
Sbjct: 204 SALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVS 263
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
P+ IT + +L C+ L++GKE + RRF P + +++ + + G + +
Sbjct: 264 PDSITFLGLLTTCSHCGLLEEGKEYFGL-MSRRFSIQPKLEHYGAMVDLLGRAGRVKEAY 322
Query: 203 RLFDGME-KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRA-DTVTLTRM 254
L + M + +V++W +++ S + N L + L++ ++ D V L+ +
Sbjct: 323 ELIESMPIEPDVVIWRSLLSS--SRTYKNPELGEIAIQNLSKAKSGDYVLLSNI 374
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 163 LKQGKEVHAYALKRRFLPHVTMV-SSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMID 221
L+ G+ VH K FL ++ ++L+ Y+K G + Y+ ++FD M ++ + W AMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 222 ---SCVENGFLN--EALAVMRSMQLTRQRADTVTLTRMLCVCGELRR---VKLGKEVHGQ 273
S + G N +A+ + R T T M+CV + + +++G VHG
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP-TDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 274 VLKLGFASVH--YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
+ KLGF ++ L++MY CG +NA VF + K TWT++
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST-YEIEASKEHCTFM 390
E +L + M +G PN TF ++LS G VE+ F M T + + EH +
Sbjct: 306 ETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365
Query: 391 VQLLTRYGKLDEAQRFLEMSP 411
V LL + G++ EA +F+ P
Sbjct: 366 VDLLGKAGRIQEAYQFILAMP 386
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 14/240 (5%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLA-------HNGFPREALEYVRL 137
++L+ + K G++ AR+VF+E P R+ WNAMI G HN R+A+ R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNA--RKAMVLFRR 208
Query: 138 M--LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMV--SSLMVMYS 193
G RP TM+ +L ++ L+ G VH Y K F P V + ++L+ MYS
Sbjct: 209 FSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYS 268
Query: 194 KCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTR 253
KCG + + +F+ M+ KNV WT+M NG NE ++ M + + + +T T
Sbjct: 269 KCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 254 MLCVCGELRRVKLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK 312
+L + V+ G E+ + + G V ++++ G G A A+P K
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++L+ ++ K G ++ A VFE ++V W +M +GLA NG E + M E G +
Sbjct: 261 TALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIK 320
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
PN IT +L + +++G E+ ++K RF P + ++ + K G I +
Sbjct: 321 PNEITFTSLLSAYRHIGLVEEGIELFK-SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAY 379
Query: 203 RLFDGME-KKNVILWTAMIDSC 223
+ M K + IL ++ ++C
Sbjct: 380 QFILAMPIKPDAILLRSLCNAC 401
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 37/318 (11%)
Query: 131 ALEYVRLMLEEGKR---PNWITMMVILPICAKLRT--LKQGKEVHAYALKRRFLPHVTMV 185
+L R +E +R P++ T + CA + L K +H AL+ L + +
Sbjct: 96 SLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTL 155
Query: 186 SSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVE-------------------- 225
++L+ +YS I +++LFD +++V+ + +ID V+
Sbjct: 156 NTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLV 215
Query: 226 --NGFLN---------EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
N ++ EA+ + M + D V + L C + + GK +H
Sbjct: 216 SWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYT 275
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
+ ++A L++ Y CG D A +F DK TW A+I +
Sbjct: 276 KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQL 393
D F M+S+G P+ TF +VL C +G V++A FD M S Y++ +H M L
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 394 LTRYGKLDEAQRFLEMSP 411
L R G ++EA +E P
Sbjct: 396 LGRAGLIEEAAEMIEQMP 413
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 13/245 (5%)
Query: 100 ARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK 159
AR++F+ P R + +WN++ISG A REA++ M+ G +P+ + ++ L CA+
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 160 LRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAM 219
++GK +H Y ++R + + L+ Y+KCG I ++ +F+ K + W AM
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGF 279
I +G + R M + + D VT +L C V + + Q+ L
Sbjct: 322 ITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYD 381
Query: 280 AS---VHYVAAELINMYGACGVFDNAKLVFGAVPDKGS-----MTWTALI---RAYGYKE 328
+ HY + ++ G G+ + A + +P G + W+ L+ R +G E
Sbjct: 382 VNREMKHY--GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIE 439
Query: 329 WYREA 333
+A
Sbjct: 440 IAEKA 444
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+ L+ + K G +D A ++FE +++ WNAMI+GLA +G ++Y R M+ G +
Sbjct: 288 TGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 145 PNWITMMVILPICAKLRTLKQGKEV-----HAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
P+ +T + +L C+ + + + + Y + R + H ++ L+ + G+I
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNRE-MKHYGCMADLL---GRAGLIE 403
Query: 200 YSIRLF-----DGMEKKNVILWTAMIDSCVENG 227
+ + DG ++ ++ W+ ++ C +G
Sbjct: 404 EAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 161/371 (43%), Gaps = 45/371 (12%)
Query: 84 PSSLIQL--HFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
P+S+ +L H + A +VF+E P V + A+I EA + + +L
Sbjct: 28 PNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCL 87
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALK-------------------------- 175
G RPN T ++ R +K GK++H YALK
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 176 RRFL-----PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLN 230
RR P+V +++L+ Y K ++ LF M +++V+ W A+I + G
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 231 EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK---LGKEVHGQVLK-LGFASVHYVA 286
EA+ + + R+ + C + + GK +H +K LG +V
Sbjct: 208 EAVNTF--VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVW 265
Query: 287 AELINMYGACGVFDNAKLVFGAVPD--KGSMTWTALIRAYGYKEWYREAIDLFDLMMSN- 343
LI+ Y CG +++ L F + + + ++W ++I Y + EA+ +F+ M+ +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFD-LMSTYEIEA--SKEHCTFMVQLLTRYGKL 400
PN T VL C+ AG +++ + +F+ ++ Y+ EH MV +L+R G+
Sbjct: 326 NLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRF 385
Query: 401 DEAQRFLEMSP 411
EA+ ++ P
Sbjct: 386 KEAEELIKSMP 396
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 17/250 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
++LI + K+ + A +F P RSV WNA+I G + G EA+ ML EG
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 145 -PNWITMMVILPICAKLRTLKQGKEVHAYALK---RRFLPHVTMVSSLMVMYSKCGVIGY 200
PN T + + + + GK +HA A+K +RF +V + +SL+ YSKCG +
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF--NVFVWNSLISFYSKCGNMED 280
Query: 201 SIRLFDGM--EKKNVILWTAMIDSCVENGFLNEALAVMRSM-QLTRQRADTVTLTRMLCV 257
S+ F+ + E++N++ W +MI NG EA+A+ M + T R + VT+ +L
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 258 CGELRRVKLG-----KEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP-D 311
C ++ G K V+ HY A +++M G F A+ + ++P D
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 312 KGSMTWTALI 321
G W AL+
Sbjct: 399 PGIGFWKALL 408
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Query: 95 GNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREA-LEYVRLMLEEGKRPNWITMMVI 153
G+ + A E+ P R+V +W +I G A P+EA L + R++ + +PN IT++ I
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 262
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLP-HVTMVSSLMVMYSKCGVIGYSIRLFDGME--K 210
LP L LK VHAY KR F+P + + +SL+ Y+KCG I + + F + +
Sbjct: 263 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 322
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVC 258
KN++ WT MI + +G EA+++ + M+ + + VT+ +L C
Sbjct: 323 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNAC 370
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALA 234
K F HV + ++L+ MY G + + ++FD M ++N + W MI G +AL
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 235 VMRSMQ--------------------------LTRQ------RADTVTLTRMLCVCGELR 262
+ M +R + + +T+ +L L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 263 RVKLGKEVHGQVLKLGFASVHY-VAAELINMYGACGVFDNAKLVFGAVPD--KGSMTWTA 319
+K+ VH V K GF V LI+ Y CG +A F +P+ K ++WT
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 320 LIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF-RFFDLM-ST 377
+I A+ +EA+ +F M G PN T +VL+ C G E+ F FF+ M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 378 YEIEASKEHCTFMVQLLTRYGKLDEAQR 405
Y+I +H +V +L R G+L+EA++
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEK 418
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 11/282 (3%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR-- 144
L+ +H G +D+ RQ+F+ P R +W + G G +A ML+ ++
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 145 ---PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVT--MVSSLMVMYSKCGVIG 199
P+WI + +L CA +R + GK+VHA K F+ + SL+ Y + +
Sbjct: 189 FKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLE 247
Query: 200 YSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCG 259
+ + + N + W A + + G E + M + + + +L C
Sbjct: 248 DANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS 307
Query: 260 ELRRV-KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT-W 317
+ + G++VH +KLGF S + LI MYG G +A+ VF + D+ S++ W
Sbjct: 308 WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGC-SPNTFTFEAVLSI 358
A++ +Y Y EAI L M + G + +T EA L +
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLNEAHLQM 409
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 118/265 (44%), Gaps = 13/265 (4%)
Query: 158 AKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT 217
A+ + E+ + +K P +T ++ L++M+ CG + + ++FD M ++ W
Sbjct: 99 ARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWA 158
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRA----DTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ C+E G +A + SM Q+ + L +L C +R +LGK+VH
Sbjct: 159 IVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHAL 218
Query: 274 VLKLGFASVH--YVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYR 331
KLGF Y++ LI YG ++A LV + + ++ W A + + ++
Sbjct: 219 CHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQ 278
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE-HCTF- 389
E I F M ++G N F VL C +V D R + I+ E C
Sbjct: 279 EVIRDFIEMGNHGIKKNVSVFSNVLKAC---SWVSDGGRSGQQVHANAIKLGFESDCLIR 335
Query: 390 --MVQLLTRYGKLDEAQRFLEMSPS 412
++++ +YGK+ +A++ + S
Sbjct: 336 CRLIEMYGKYGKVKDAEKVFKSSKD 360
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
SLI+ + + ++ A V + + AW A ++ G +E + M G +
Sbjct: 235 SLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKK 294
Query: 146 NWITMMVILPICAKLRTL-KQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N +L C+ + + G++VHA A+K F + L+ MY K G + + ++
Sbjct: 295 NVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKV 354
Query: 205 F-DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLT 252
F ++ +V W AM+ S ++NG EA+ ++ M+ T +A L
Sbjct: 355 FKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 20/308 (6%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILP-ICAKLRTLKQGKEVHAYA 173
+N +++GL EALE V M+E G +P IT+ ++ +C GK A
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL------NGKVSDAVV 214
Query: 174 LKRR-----FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL----WTAMIDSCV 224
L R F P+ ++ + K G ++ L ME++N+ L ++ +ID
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
++G L+ A + M++ +AD +T ++ R G ++ ++K +
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLM 340
+ LI+ + G A + + +G ++T+ +LI + + EAI + DLM
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKL 400
+S GC P+ TF +++ +A ++D F MS + A+ +VQ + GKL
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 401 DEAQRFLE 408
+ A++ +
Sbjct: 455 EVAKKLFQ 462
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 29/328 (8%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
L R + + +V ++ +I G REA + ++ M++ G PN IT ++
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTA 218
K L++ ++ + + P + + L+ Y K I + LF M + VI T
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 219 MIDSCV----ENGFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRRVKLGKEVH 271
++ V ++G L A + + M R R D V+ L LC GEL + E+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK---ALEIF 496
Query: 272 GQVLKLGFASVHYVAAELINMYGACGV--FDNAKLVFGAVPDKG----SMTWTALIRAYG 325
G++ K + +I ++G C D+A +F ++P KG + + +I
Sbjct: 497 GKIEKSKME--LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED----AFRFFDLMSTYEIE 381
K+ +A LF M G +P+ T+ ++ RA +D A + M +
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILI----RAHLGDDDATTAAELIEEMKSSGFP 610
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRFLEM 409
A ++ +L+ G+LD++ FL+M
Sbjct: 611 ADVSTVKMVINMLSS-GELDKS--FLDM 635
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 30/314 (9%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL-PICAKLRTLKQGKEVHAY 172
++ +I+GL G EALE V M+E G +P IT+ ++ +C GK A
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL------NGKVSDAV 197
Query: 173 ALKRR-----FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL----WTAMIDSC 223
L R F P+ ++ + K G ++ L ME++ + L ++ +ID
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 224 VENGFLNEALAVMRSMQLTRQRADTV---TLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
++G L+ A + M++ +AD + TL R C G R G ++ ++K
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG---RWDDGAKLLRDMIKRKIT 314
Query: 281 SVHYVAAELINMYGACGVFDNAK------LVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
+ LI+ + G A+ + G PD ++T+T+LI + + +A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD--TVTYTSLIDGFCKENQLDKAN 372
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLL 394
+ DLM+S GC PN TF +++ +A ++D F MS + A ++Q
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 395 TRYGKLDEAQRFLE 408
GKL+ A+ +
Sbjct: 433 CELGKLEVAKELFQ 446
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 141/330 (42%), Gaps = 20/330 (6%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
VDL +++ PR + ++ + S +A L+ + M +G N T+ +++
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM----EKKN 212
C + R L +K + P S+L+ G + ++ L D M K
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELR-RVKLGK 268
+I A+++ NG +++A+ ++ M T + + VT + +++C G+ ++L +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLR 236
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGAC--GVFDNAKLVFGAVPDKG----SMTWTALIR 322
++ + +KL +V Y I + G C G DNA +F + KG + +T LIR
Sbjct: 237 KMEERKIKLD--AVKYS----IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
+ Y + + L M+ +P+ F A++ + G + +A M I
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 383 SKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
T ++ + +LD+A L++ S
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 20/272 (7%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
L R + + V A++A+I G REA E + M++ G P+ +T ++
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV----I 214
K L + + + + P++ + L+ Y K +I + LF M + V +
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRR-VKLGKEV 270
+ +I E G L A + + M R R D V+ L LC GE + +++ +++
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGV--FDNAKLVFGAVPDKG----SMTWTALIRAY 324
++L + + ++G C D+A +F ++P KG T+ +I
Sbjct: 484 EKSKMELDIGIYNII------IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 325 GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
K EA LF M +G SPN T+ ++
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 148/320 (46%), Gaps = 42/320 (13%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL-PICAKLRTLKQGKEVHAY 172
++ +++G G EA+ V M+E +RP+ +T+ ++ +C K G+ A
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK------GRVSEAL 195
Query: 173 ALKRR-----FLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKN----VILWTAMIDSC 223
L R F P ++ K G ++ LF ME++N V+ ++ +IDS
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRM---LCVCGE------LRRVKLGKEVHGQV 274
++G ++AL++ M++ +AD VT + + LC G+ + R +G+ + V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKE 328
+ + LI+++ G AK ++ G PD ++T+ +LI + +
Sbjct: 316 VTF---------SALIDVFVKEGKLLEAKELYNEMITRGIAPD--TITYNSLIDGFCKEN 364
Query: 329 WYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCT 388
EA +FDLM+S GC P+ T+ +++ +A V+D R F +S+ + +
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 389 FMVQLLTRYGKLDEAQRFLE 408
+V + GKL+ A+ +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQ 444
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 122/286 (42%), Gaps = 51/286 (17%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLE 140
S+LI + K G + A++++ E R ++ +N++I G EA + LM+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+G P+ +T +++ K + + G + + +P+ ++L++ + + G +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ LF M + +V+ + ++D +NG LN+AL + MQ +R
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR------------- 485
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV--FDNAKLVFGAVPDKGS 314
+ LG + + ++G C D+A +F ++ DKG
Sbjct: 486 ------------------MTLGIGIYNII------IHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 315 ----MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL 356
+T+ +I K EA LF M +GC+P+ FT+ ++
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 85 SSLIQLHFKRGNVDLARQVFE----ESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+S++ L+ +G ++ R VFE E + ++ ++NA++ A +G AL + + +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G P+ ++ +L + R + KEV K R P+V ++L+ Y G +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 201 SIRLFDGME----KKNVI-----------------------------------LWTAMID 221
++ +F ME K NV+ + + I
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH--GQVLKLGF 279
S + L +A+A+ +SM+ + +AD+VT T + + G R K + + ++ L
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFT--ILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREA 333
V + ++ Y G A+ +F G PD + +T+++ AY E + +A
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD--VIAYTSMLHAYNASEKWGKA 487
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
+LF M +NG P++ A++ ++ G + F DLM EI
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 534
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 122/300 (40%), Gaps = 41/300 (13%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSV----SAWNAMISGLAHNGFPREALEYVRLMLEE 141
+LI H + G A + ++ R ++ S +N +I+ +G REALE + M +
Sbjct: 51 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 110
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G P+ +T ++L R + + P T + ++ SK G +
Sbjct: 111 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 170
Query: 202 IRLFDGMEKK------NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
+ LF+ M +K +V+ +T+++ G + AV +M + + V+ ++
Sbjct: 171 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 230
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
G +VH ++ +++ G + N G +PD +
Sbjct: 231 ----------------------GAYAVHGMSGTALSVLG--DIKQN-----GIIPD--VV 259
Query: 316 TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
++T L+ +YG +A ++F +M PN T+ A++ GF+ +A F M
Sbjct: 260 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 24/311 (7%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL-PICAKLRTLKQGKEVHAY 172
++ +I+GL G EALE V M+E G +P+ IT+ ++ +C GKE A
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL------SGKEAEAM 213
Query: 173 ALKRRFL-----PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVIL----WTAMIDSC 223
L + + P+ ++ + K G ++ L ME++N+ L ++ +ID
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH 283
++G L+ A + M++ + +T ++ R G ++ ++K
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 284 YVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
+ LI+ + G A+ + G PD ++T+T+LI + + +A +
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD--TITYTSLIDGFCKENHLDKANQMV 391
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRY 397
DLM+S GC PN TF +++ +A ++D F MS + A ++Q
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 398 GKLDEAQRFLE 408
GKL+ A+ +
Sbjct: 452 GKLNVAKELFQ 462
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 130/311 (41%), Gaps = 47/311 (15%)
Query: 93 KRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
K G++D A +F E + ++ +N +I G + G + + +R M++ PN +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T V++ K L++ +E+H + R P +SL+ + K + + ++ D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 209 EKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K N+ + +I+ + +++ L + R M L ADTVT ++ EL ++
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 265 KLGKE--------------VHGQVLKLG-------------FASVHYVAAEL------IN 291
+ KE V ++L G F + EL I
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 292 MYGACGV--FDNAKLVFGAVPDK----GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGC 345
++G C D+A +F ++P K G T+ +I K EA LF M +G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 346 SPNTFTFEAVL 356
+P+ +T+ ++
Sbjct: 575 APDGWTYNILI 585
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 232 ALAVMRSMQLTRQRADTVTLTRML-CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELI 290
LA+ + M+L + TL+ M+ C C R++ L G+++KLG+ + LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFC-RCRKLCLAFSAMGKIIKLGYEPNTITFSTLI 165
Query: 291 NMYGAC---GVFDNAKLV-----FGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
N G C V + +LV G PD +T L+ EA+ L D M+
Sbjct: 166 N--GLCLEGRVSEALELVDRMVEMGHKPD--LITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDE 402
GC PN T+ VL++ ++G A M I+ + ++ L ++G LD
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 403 A 403
A
Sbjct: 282 A 282
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ----VLK 276
D+ ++G + +AL + + D L R+ +CGE ++ K VHG+ V
Sbjct: 227 DAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSH 286
Query: 277 LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDL 336
L +S H L+ MY CG+ + A VF + +K TW +IR + + +AID+
Sbjct: 287 LDLSSNHV----LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS-TYEIEASKEHCTFMVQLLT 395
F G P+ F + C G V++ F+ MS Y I S E +V++
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402
Query: 396 RYGKLDEAQRFLEMSP 411
G LDEA F+E P
Sbjct: 403 LPGFLDEALEFVERMP 418
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 85 SSLIQLHFKRGNVDLARQVFE----ESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+S++ L+ +G ++ R VFE E + ++ ++NA++ A +G AL + + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G P+ ++ +L + R + KEV K R P+V ++L+ Y G +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 201 SIRLFDGME----KKNVI-----------------------------------LWTAMID 221
++ +F ME K NV+ + + I
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVH--GQVLKLGF 279
S + L +A+A+ +SM+ + +AD+VT T + + G R K + + ++ L
Sbjct: 504 SYINAAELEKAIALYQSMRKKKVKADSVTFT--ILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREA 333
V + ++ Y G A+ +F G PD + +T+++ AY E + +A
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD--VIAYTSMLHAYNASEKWGKA 619
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
+LF M +NG P++ A++ ++ G + F DLM EI
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEI 666
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 122/300 (40%), Gaps = 41/300 (13%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSV----SAWNAMISGLAHNGFPREALEYVRLMLEE 141
+LI H + G A + ++ R ++ S +N +I+ +G REALE + M +
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDN 242
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G P+ +T ++L R + + P T + ++ SK G +
Sbjct: 243 GVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQA 302
Query: 202 IRLFDGMEKK------NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
+ LF+ M +K +V+ +T+++ G + AV +M + + V+ ++
Sbjct: 303 LDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM 362
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
G +VH ++ +++ G + N G +PD +
Sbjct: 363 ----------------------GAYAVHGMSGTALSVLG--DIKQN-----GIIPD--VV 391
Query: 316 TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
++T L+ +YG +A ++F +M PN T+ A++ GF+ +A F M
Sbjct: 392 SYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 220 IDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV---CGELRRVKLGKEVHGQVLK 276
+DS G + +A+ +++S R V L R+ + CG+ + ++ K VH +
Sbjct: 153 LDSICREGKVKKAVEIIKSW---RNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITS 209
Query: 277 -LGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAID 335
+G + + + +I MY CG ++A VF ++P++ TW +IR + +AID
Sbjct: 210 SVGISDISAYNS-IIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAID 268
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLL 394
F G P+ F+ + C G + + F+ M Y I EH +V++L
Sbjct: 269 TFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKML 328
Query: 395 TRYGKLDEAQRFLE-MSPSL 413
G LDEA RF+E M P++
Sbjct: 329 AEPGYLDEALRFVESMEPNV 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 119 ISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRF 178
+ + G ++A+E ++ EG + + I +C + L++ K VH +
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 179 LPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRS 238
+ ++ +S++ MYS CG + ++ +F+ M ++N+ W +I +NG +A+
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 239 MQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV----HYVAAELINMYG 294
+ + D + CG L + G +H + + + + HYV+ L+ M
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYVS--LVKMLA 329
Query: 295 ACGVFDNA 302
G D A
Sbjct: 330 EPGYLDEA 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S+I+++ G+V+ A VF P R++ W +I A NG +A++ +EG +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRF--LPHVTMVSSLMVMYSKCGVIGYSI 202
P+ I C L + +G +H ++ + + +P + SL+ M ++ G + ++
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 338
Query: 203 RLFDGMEKKNVILWTAMID 221
R + ME NV LW +++
Sbjct: 339 RFVESME-PNVDLWETLMN 356
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
++ +N +I GL EA+ + + + +P+ +T ++ K++ + G E+
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI----RLFDGMEKKNVILWTAMIDSCVEN 226
L RF P VSSL+ K G I ++ R+ D N+ ++ A+IDS +
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 227 GFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRRVKLGKEVH--GQVLKLGFAS 281
+EA + M R + VT L M C RR KL + G+++ G
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC-----RRGKLDTALSFLGEMVDTGLKL 435
Query: 282 VHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLF 337
Y LIN + G A+ + +K +T+T+L+ Y K +A+ L+
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLY 495
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRY 397
M G +P+ +TF +LS RAG + DA + F+ M+ + ++ ++ M++
Sbjct: 496 HEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE 555
Query: 398 GKLDEAQRFLE 408
G + +A FL+
Sbjct: 556 GDMSKAFEFLK 566
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 129/305 (42%), Gaps = 16/305 (5%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
S +A ++++ GL G EAL V+ +++ G PN ++ K R + + +
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI----RLFDGMEKKNVILWTAMIDSCVEN 226
K P+ S L+ M+ + G + ++ + D K +V + ++I+ +
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRML---CVCGELRR-VKLGKEVHGQVLKLGFASV 282
G ++ A M M + VT T ++ C G++ + ++L E+ G+ G A
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK----GIAPS 506
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPD----KGSMTWTALIRAYGYKEWYREAIDLFD 338
Y L++ G+ +A +F + + +T+ +I Y + +A +
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYG 398
M G P+T+++ ++ G +A F D + E ++ T ++ R G
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 399 KLDEA 403
KL+EA
Sbjct: 627 KLEEA 631
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 24/265 (9%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVIL--PICAKLRTLKQG--KEVH 170
+ ++ G G EAL + M++ G + + V++ + K R L G KE+H
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVEN 226
LK P + +S++ SK G + ++D M + N + +TA+I+ +
Sbjct: 675 DRGLK----PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVC--GELRRVKLGKEVHGQVLKLGFASVHY 284
GF+NEA + MQ + VT L + GE+ K E+H +LK G +
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQK-AVELHNAILK-GLLANTA 788
Query: 285 VAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREAIDLFD 338
LI + G + A + G PD +T+T +I + ++AI+L++
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPD--CITYTTMINELCRRNDVKKAIELWN 846
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAG 363
M G P+ + ++ C AG
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 43/304 (14%)
Query: 112 VSAWNAMISGLA---HNGFPREALEYVRLMLEEGKRPN-WITMMVILPICAKLRTLKQGK 167
V +A++ GL H G A+E M+ G RP+ +I VI +C +L+ L + K
Sbjct: 192 VRTLSALLHGLVKFRHFGL---AMELFNDMVSVGIRPDVYIYTGVIRSLC-ELKDLSRAK 247
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENG 227
E M++ + ++ Y++ L DG+ KK + W
Sbjct: 248 E---------------MIAHMEATGCDVNIVPYNV-LIDGLCKKQKV-W----------- 279
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
EA+ + + + + D VT ++ +++ ++G E+ ++L L F+ +
Sbjct: 280 ---EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKGS----MTWTALIRAYGYKEWYREAIDLFDLMMSN 343
L+ G + A + V D G + ALI + + EA LFD M
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
G PN T+ ++ + R G ++ A F M ++ S ++ ++G + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 404 QRFL 407
+ F+
Sbjct: 457 EGFM 460
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 17/325 (5%)
Query: 91 HFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITM 150
H K +++ + +E V +N++ISGL G +EA+E + M+ PN +T
Sbjct: 310 HVKHA-IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 151 MVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK 210
++ K +++ E+ + LP V +SL+ ++ LF+ M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 211 K----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKL 266
K + + +IDS G L+EAL +++ M+L+ +T ++ + + +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 267 GKEVHGQVLKLGFASVHYVAAELINMYGACG---VFDNAKLVF-----GAVPDKGSMTWT 318
+E+ ++ G + LI+ G C V D A+L+ G PDK T+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLID--GLCKSRRVEDAAQLMDQMIMEGQKPDK--YTYN 544
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
+L+ + ++A D+ M SNGC P+ T+ ++S +AG VE A + +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEA 403
I + ++Q L R K EA
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEA 629
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 145/360 (40%), Gaps = 73/360 (20%)
Query: 87 LIQLHFKRGNVDLARQVFEESPR----RSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
+I L + G +D +VF+E P RSV ++ A+I+ NG +LE + M E
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ +T ++ CA+ +G L+ ++++ G
Sbjct: 207 ISPSILTYNTVINACARGGLDWEG---------------------LLGLFAEMRHEGI-- 243
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
+ +++ + ++ +C G +EA V R+M D T + ++ G+LR
Sbjct: 244 -------QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 263 RVK-----LGKEVHGQVL-------------------KLGFASVHYVAAE---------- 288
R++ LG+ G L K H + A
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 289 -LINMYGACGVFDNAKLVF----GAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
L+N++G G +D+ + +F + D + T+ LI +G +++E + LF M+
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
P+ T+E ++ C + G EDA + M+ +I S + T +++ + +EA
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 142/336 (42%), Gaps = 19/336 (5%)
Query: 94 RGNVD------LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNW 147
RG +D L ++ E + + +N ++S A G EA R M + G P+
Sbjct: 223 RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDL 282
Query: 148 ITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDG 207
T ++ KLR L++ ++ LP +T + L+ Y+K G I ++ +F
Sbjct: 283 TTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ 342
Query: 208 MEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
M+ N ++ +++ ++G ++ + M+ + D T ++ V GE
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTW 317
K + +++ +I G G+ ++A+ + VP S +
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS--SKAY 460
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST 377
T +I A+G Y EA+ F+ M G +P+ TF ++L R G V+++ +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 378 YEIEASKEHCTFMVQLLTRYGKLDEA-QRFLEMSPS 412
I +++ ++ + GK +EA + +++M S
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 126/313 (40%), Gaps = 24/313 (7%)
Query: 112 VSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHA 171
++++N ++ A +G +EA+ M G PN T V+L + + +++
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 172 YALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVI----LWTAMIDSCVENG 227
P + L+ ++ + G + LF M ++N+ + +I +C + G
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Query: 228 FLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAA 287
+A +++ M + T ++ G+ ++ + L + F ++H V +
Sbjct: 437 LHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ-------AALYEEAL-VAFNTMHEVGS 488
Query: 288 E--------LINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAID 335
L+ + G+ ++ + + D G T+ A I AY + EA+
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVK 548
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
+ M + C P+ T EAVLS+ A V++ F+ M +I S M+ +
Sbjct: 549 TYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYG 608
Query: 396 RYGKLDEAQRFLE 408
+ + D+ LE
Sbjct: 609 KTERWDDVNELLE 621
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
C L+ ++ K+VH L+ F + +I+M+G C +AK VF + DK +W
Sbjct: 246 CANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSW 305
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM-S 376
++ AY +A+ LF+ M +G PN TF V C G +E+AF FD M +
Sbjct: 306 HLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKN 365
Query: 377 TYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
+ I EH ++ +L + G L EA++++ P
Sbjct: 366 EHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLP 400
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 129 REALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSL 188
++A+E +L++G P+ +++ CA L++L+ K+VH + L+ +F + + +
Sbjct: 222 KDAIE----LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 189 MVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADT 248
+ M+ +C I + R+FD M K++ W M+ + +NG ++AL + M + +
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 249 VTLTRMLCVCGELRRVKLG-------KEVHGQVLKLGFASVHYVAAELINMYGACGVFDN 301
T + C + ++ K HG + + HY+ ++ + G CG
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHG----ISPKTEHYLG--VLGVLGKCGHLVE 391
Query: 302 AKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
A+ +P + + + +R Y IDL D M
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYAR---LHGDIDLEDYM 427
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 131/301 (43%), Gaps = 13/301 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEES----PRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
S++I + G V +A+++FE + +V A++A+IS +G EA+ M E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 141 EGKRPNWITMMVILPICAKLR-TLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
G RPN +T ++ C K KQ + + P +SL+ + S+ G+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 200 YSIRLFDGME----KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
+ LFD M +++V + ++D+ + G ++ A ++ M + R + V+ + ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD---- 311
+ R + G++ LG A L+++Y G + A + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 312 KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRF 371
K +T+ AL+ YG + Y E +F M PN T+ ++ + G ++A
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 372 F 372
F
Sbjct: 537 F 537
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
M+ G +V + K + G+ + Y + LI+ YG G+ + A VF ++ + G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 314 S----MTWTALIRAYGYKEW-YREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDA 368
+T+ A+I A G +++ FD M NG P+ TF ++L++C R G E A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 369 FRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSP 411
FD M+ IE ++ + + G++D A L P
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 3/202 (1%)
Query: 211 KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEV 270
+NV + T DS G EA+ V+ ++ D + L + +CG+ ++ + V
Sbjct: 84 QNVTIET--FDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVV 141
Query: 271 HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWY 330
H ++ L +I MY C D+A VF +P+ S T ++R + +
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYG 201
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFV-EDAFRFFDLMSTYEIEASKEHCTF 389
EAIDLF G PN F V S C G V E + +F + Y I S EH
Sbjct: 202 EEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHS 261
Query: 390 MVQLLTRYGKLDEAQRFLEMSP 411
+ ++L G LDEA F+E P
Sbjct: 262 VTKMLATSGHLDEALNFVERMP 283
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 139/341 (40%), Gaps = 52/341 (15%)
Query: 112 VSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHA 171
V +N MISG G AL + M P+ +T IL LKQ EV
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 172 YALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVENG 227
L+R P V + L+ + +G++++L D M + +V+ + +++ + G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 228 FLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
L+EA+ + M + + + +T + R +C G R +++ +L+ GF+
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG---RWMDAEKLLADMLRKGFSPSVV 345
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLM 340
LIN G+ A + +P G S+++ L+ + ++ AI+ + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDA-------------------------------- 368
+S GC P+ T+ +L+ + G VEDA
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 369 ---FRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRF 406
+ D M +++ + +V L+R GK+DEA +F
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 143/337 (42%), Gaps = 20/337 (5%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
LI+ + V A ++ +E R V +N +++G+ G EA++++ M G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 143 KRPNWITMMVIL-PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
+PN IT +IL +C+ R + +++ A L++ F P V + L+ + G++G +
Sbjct: 305 CQPNVITHNIILRSMCSTGRWM-DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 202 IRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
I + + M + N + + ++ + ++ A+ + M D VT ML
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV------PD 311
+ +V+ E+ Q+ G + V +I+ G A + + PD
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 312 KGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV-LSICDRAGFVEDAFR 370
++T+++L+ + EAI F G PN TF ++ L +C ++ + A
Sbjct: 484 --TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC-KSRQTDRAID 540
Query: 371 FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
F M + ++ T +++ L G EA L
Sbjct: 541 FLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 140/318 (44%), Gaps = 8/318 (2%)
Query: 99 LARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICA 158
L +++ E+ +N ++S A G ALEY R + + G P+ +T +L I
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILC 421
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWT- 217
+ + + + + V A + V +M MY G++ + LF+ + V+ T
Sbjct: 422 QRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT 481
Query: 218 --AMIDSCVENGFLNEALAVMRSMQ-LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
A+ID E G EA V + ++ QR D + M+ G+ + + + +
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM----TWTALIRAYGYKEWY 330
G L M + D A+ + + D G T+ A+I +Y
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFM 390
+A+DL++ M G PN + ++++ +G VE+A ++F +M + ++++ T +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 391 VQLLTRYGKLDEAQRFLE 408
++ ++ G L+EA+R +
Sbjct: 662 IKAYSKVGCLEEARRVYD 679
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 141/343 (41%), Gaps = 45/343 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
+S ++L VDL + + + + + ++I+G A +G EA++Y R+M E G +
Sbjct: 593 ASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQ 652
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
N I + ++ +K+ L++ + V+ P V +S++ + + G++ + +
Sbjct: 653 SNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESI 712
Query: 205 FDGMEKK---NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTR-MLCVCGE 260
F+ + +K +VI + M+ G L+EA+ V M+ + +D + + M C +
Sbjct: 713 FNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAAD 772
Query: 261 --------------------------------LRRVKLGKEVHGQVLKLGFASVHYVAAE 288
L++ + E Q L+ + +A
Sbjct: 773 GQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQ-LQTAYNEAKPLATP 831
Query: 289 LI--NMYGACGVFDNA-----KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMM 341
I ++ A G++ A +L G +P + + A+I Y A+ + M
Sbjct: 832 AITATLFSAMGLYAYALESCQELTSGEIP-REHFAYNAVIYTYSASGDIDMALKAYMRMQ 890
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASK 384
G P+ T ++ I +AG VE R ++ E+E S+
Sbjct: 891 EKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQ 933
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 28/318 (8%)
Query: 112 VSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKL-----RTLKQG 166
V A+ ++ + G +A++ M E G P +T VIL + K+ + L
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 167 KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME----KKNVILWTAMIDS 222
E+ + LK T++S+ ++ G++ + F ++ + + + A++
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSAC----AREGLLREAKEFFAELKSCGYEPGTVTYNALLQV 325
Query: 223 CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV---LKLGF 279
+ G EAL+V++ M+ AD+VT ++ R KE G + K G
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA---YVRAGFSKEAAGVIEMMTKKGV 382
Query: 280 ASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREA 333
+I+ YG G D A +F G VP+ + T+ A++ G K E
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN--TCTYNAVLSLLGKKSRSNEM 440
Query: 334 IDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQL 393
I + M SNGCSPN T+ +L++C G + R F M + E ++ ++
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 394 LTRYG-KLDEAQRFLEMS 410
R G ++D ++ + EM+
Sbjct: 501 YGRCGSEVDASKMYGEMT 518
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
+NA++ G EAL ++ M E + +T ++ + K+ V
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMIDSCVENGFLN 230
K+ +P+ ++++ Y K G +++LF M++ N + A++ + N
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 231 EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELI 290
E + ++ M+ + T ML +CG K V ++ GF LI
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI 498
Query: 291 NMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCS 346
+ YG CG +A ++G + G T+ AL+ A K +R ++ M S G
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 347 PNTFTFEAVLSICDRAG 363
P ++ +L + G
Sbjct: 559 PTETSYSLMLQCYAKGG 575
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 24/313 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRS----VSAWNAMISGLAHNGFPREALEYVRLMLE 140
++LI + + G+ A +++ E R V+ +NA+++ LA G R + M
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+G +P + ++L AK + + + + P ++ +L++ KC +
Sbjct: 555 KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 201 SIRLFDGMEK----KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LTR 253
S R F +K +++++ +M+ N ++A ++ S++ D VT L
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 254 MLCVCGELRRVK-LGKEVHGQVLKLGFASVHYVAAELINMYGAC--GVFDNAKLVFGAVP 310
M GE + + + K + LK S + V + G C G+ A + +
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV------IKGFCRRGLMQEAVRMLSEMT 728
Query: 311 DKGS----MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
++G T+ + Y + E D+ + M N C PN TF+ V+ RAG
Sbjct: 729 ERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYS 788
Query: 367 DAFRFFDLMSTYE 379
+A F + T++
Sbjct: 789 EAMDFVSKIKTFD 801
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 176 RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMIDSCVENG-FLN 230
+ +L V ++++ YS+ G +I LF+ M++ ++ + ++D + G
Sbjct: 204 QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR 263
Query: 231 EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELI 290
+ L V+ M+ + D T + +L C ++ KE ++ G+
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY----------- 312
Query: 291 NMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTF 350
+ G++T+ AL++ +G Y EA+ + M N C ++
Sbjct: 313 --------------------EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV 352
Query: 351 TFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
T+ +++ RAGF ++A ++M+ + + T ++ + GK DEA +
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 150/365 (41%), Gaps = 58/365 (15%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
+D R V E R + + N ++ GL+ + A + L+L+ G PN +T ++
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----N 212
K + + ++ +R P + S+L+ Y K G++G +LF K +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V+++++ ID V++G L A V + M + VT T ++ + R+ ++G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 273 QVLKLGFASVHYVAAELINMYGACGVF--------DNAKL-------VFGAVPDKGS--- 314
Q+LK G + LI+ + CG D K+ ++G + D S
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 315 ---------------------MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
+ + +LI + + EA+ +F LM G P+ TF
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 354 AVLSICDRAGFVEDAF----------RFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
V+ R +EDAF + FDLM +I A C ++ LL + ++++A
Sbjct: 536 TVM----RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 404 QRFLE 408
+F
Sbjct: 592 SKFFN 596
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 61/376 (16%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE------SPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
SS I ++ K G++ A V++ SP +V + +I GL +G EA +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISP--NVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 139 LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
L+ G P+ +T ++ K L+ G ++ +K + P V + L+ SK G++
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 199 ----GYSIRLFDGMEKKNVILWTAMIDS-CVENGFLNEALAVMRSMQLTRQRADTVTLTR 253
+S+++ + NV+++ ++ID C N F +EAL V R M + + D T T
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF-DEALKVFRLMGIYGIKPDVATFTT 536
Query: 254 MLCV-------CGELR------------RVKLGKEVH--GQVLKLGFASVHYV--AAELI 290
++ V C ++ R K+ ++ V+ L F H + A++
Sbjct: 537 VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF-KCHRIEDASKFF 595
Query: 291 N-----------------MYGACGV--FDNAKLVFGAVP----DKGSMTWTALIRAYGYK 327
N + G C + D A+ +F + ++T T LI
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHC 387
AI +F +M G PN T+ ++ ++ +E +F+ F+ M I S
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 388 TFMVQLLTRYGKLDEA 403
+ ++ L + G++DEA
Sbjct: 716 SIIIDGLCKRGRVDEA 731
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 146/373 (39%), Gaps = 51/373 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE----SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
SSL+ KR ++D + +E + +V + I L G EA E ++ M +
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDD 286
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
EG P+ +T V++ R L KEV R P +L+ +S +
Sbjct: 287 EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ + MEK +V+ +T ++D+ + G EA + M+ + T ++C
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACG-------VFDN-------- 301
+ R+ E+ G + LG Y I+ YG G F+
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 302 --------------------AKLVF------GAVPDKGSMTWTALIRAYGYKEWYREAID 335
AK +F G VPD S+T+ +++ Y EAI
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD--SVTYNMMMKCYSKVGEIDEAIK 524
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
L MM NGC P+ ++++ +A V++A++ F M +++ + ++ L
Sbjct: 525 LLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 584
Query: 396 RYGKLDEAQRFLE 408
+ GK+ EA E
Sbjct: 585 KNGKIQEAIELFE 597
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 21/313 (6%)
Query: 109 RRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKE 168
+R + + + L+ G ++A +R M E G N + ++ + K R + E
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 169 VHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME----KKNVILWTAMIDSCV 224
V+ + F P + SSLMV K I + L ME K NV +T I
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 225 ENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFAS--- 281
G +NEA +++ M D VT T ++ R++ KEV + +K G
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF-EKMKTGRHKPDR 328
Query: 282 VHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWTALIRAYGYKEWYREAID 335
V Y+ L++ + D+ K + G VPD +T+T L+ A + EA D
Sbjct: 329 VTYIT--LLDRFSDNRDLDSVKQFWSEMEKDGHVPD--VVTFTILVDALCKAGNFGEAFD 384
Query: 336 LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLT 395
D+M G PN T+ ++ R ++DA F M + ++ + T++V +
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY--TYIV-FID 441
Query: 396 RYGKLDEAQRFLE 408
YGK ++ LE
Sbjct: 442 YYGKSGDSVSALE 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 14/281 (4%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALE-YVRLMLEE 141
L+ + K G +D ++++E A N +ISGL G +AL+ Y LM +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
P T ++ +K L + K++ L P+ + + L+ + K G +
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 202 IRLFDGMEKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
LF M K+ V ++ ++D G ++E L + ++ + D V ++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 258 CGELRRVKLGKEVHGQV-LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG--- 313
G+ R++ + ++ G Y LI G G+ + A ++ + G
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 314 -SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFE 353
T+ ALIR Y A ++ M++ G SPNT T+E
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYE 1106
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 50/311 (16%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
V +N +I GL NG +EA+ + M ++ P+++T+ +LP K ++
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIED----- 695
Query: 171 AYALKRRFLPHVT----------MVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMI 220
AY + FL + ++ S++ + +S RL
Sbjct: 696 AYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL---------------- 739
Query: 221 DSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFA 280
V NG + +++ + + + V+ R L E LG + L
Sbjct: 740 ---VANGICRDGDSILVPIIRYSCKHNNVSGARTLF---EKFTKDLGVQPKLPTYNLLIG 793
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLM 340
+ + A++I + A VF K G +PD T+ L+ AYG E +L+ M
Sbjct: 794 GL--LEADMIEI--AQDVFLQVKST-GCIPDVA--TYNFLLDAYGKSGKIDELFELYKEM 846
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDAFR-FFDLMSTYEIEASKEHCTF--MVQLLTRY 397
++ C NT T V+S +AG V+DA ++DLMS + S CT+ ++ L++
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF--SPTACTYGPLIDGLSKS 904
Query: 398 GKLDEAQRFLE 408
G+L EA++ E
Sbjct: 905 GRLYEAKQLFE 915
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 16/276 (5%)
Query: 96 NVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMM 151
++D +Q + E + V + ++ L G EA + + +M ++G PN T
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 152 VILPICAKLRT--LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME 209
+ IC LR L E+ P + Y K G ++ F+ M+
Sbjct: 403 TL--ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 210 KK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVK 265
K N++ A + S + G EA + ++ D+VT M+ ++ +
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 266 LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD----KGSMTWTALI 321
++ ++++ G V LIN D A +F + + +T+ L+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS 357
G +EAI+LF+ M+ GC PNT TF +
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 145/334 (43%), Gaps = 25/334 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLE 140
++LI + KRG ++ A V E R +S +N +I G + +A+ + MLE
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLE 455
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
P+ +T ++ + + + R +P +S++ K +
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRM-- 254
+ LFD +E+K NV+++TA+ID + G ++EA ++ M +++T +
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 255 -LCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF------G 307
LC G+L+ L +E +++K+G LI+ G FD+A F G
Sbjct: 576 GLCADGKLKEATLLEE---KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 308 AVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
PD + T+T I+ Y + +A D+ M NG SP+ FT+ +++ G
Sbjct: 633 TKPD--AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 368 AFRFFDLMSTYEIEASKEHCTFMVQLL--TRYGK 399
AF M E S+ +++ L +YGK
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 161/382 (42%), Gaps = 61/382 (15%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESP----RRSVSAWNAMISGLA----------------- 123
+SLI + +R ++D A +VF E P RR+ A+ +I GL
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 124 HNGFP------------------REALEYVRLMLEEGKRPNWITMMVIL-PICAKLRTLK 164
FP EAL V+ M E G +PN T V++ +C++ + +
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCK-FE 375
Query: 165 QGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMI 220
+ +E+ L++ +P+V ++L+ Y K G+I ++ + + ME + N + +I
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 221 DS-CVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKL-- 277
C N +++A+ V+ M + D VT + + G+ R ++L L
Sbjct: 436 KGYCKSN--VHKAMGVLNKMLERKVLPDVVTYNSL--IDGQCRSGNFDSAY--RLLSLMN 489
Query: 278 --GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYR 331
G + +I+ + A +F ++ KG + +TALI Y
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 332 EAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMV 391
EA + + M+S C PN+ TF A++ G +++A + M ++ + T ++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 392 QLLTRYGKLDEA-QRFLEMSPS 412
L + G D A RF +M S
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSS 631
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 130/318 (40%), Gaps = 7/318 (2%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
++L +++ E + ++ + +I L +A E + MLE+G PN IT ++
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK---NV 213
K ++ +V R+ P+ + L+ Y K V L +E+K +V
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDV 462
Query: 214 ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQ 273
+ + ++ID +G + A ++ M D T T M+ + +RV+ ++
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 274 VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEW 329
+ + G + LI+ Y G D A L+ + K S+T+ ALI
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 330 YREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF 389
+EA L + M+ G P T ++ + G + A+ F M + + T
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 390 MVQLLTRYGKLDEAQRFL 407
+Q R G+L +A+ +
Sbjct: 643 FIQTYCREGRLLDAEDMM 660
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 5/181 (2%)
Query: 229 LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAE 288
+ EAL V+ ++ D L + +CGE+ ++ + VH + L S H V
Sbjct: 93 IREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTV--- 149
Query: 289 LINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
I MY C D+A VF +P + S TW +IR AID+F + G P+
Sbjct: 150 -IEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLM-STYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
F+AV C G + + F+ M Y + S E ++++L G LDEA F+
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 408 E 408
E
Sbjct: 269 E 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
++I+++ + D A VF E P+R+ W MI LA NG A++ +EEG +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMV--MYSKCGVIGYSIR 203
+ + C + + +G +H ++ R + ++M + V M + CG + ++
Sbjct: 208 DKEIFKAVFFACVSIGDINEGL-LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 204 LFDGME-KKNVILWTAMIDSCVENGFL 229
+ M + +V +W +++ C G+L
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYL 293
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 138/322 (42%), Gaps = 12/322 (3%)
Query: 98 DLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVI 153
D+A +F+E +R+++ ++ +I+ G AL +++ M ++ + + +
Sbjct: 172 DIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNL 231
Query: 154 LPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK-- 211
+ + +L + + + + P + +S++ +Y K + + L M +
Sbjct: 232 IELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGV 291
Query: 212 --NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKE 269
N + ++ ++ VEN EAL+V M+ D T M+ V G+L VK
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADR 351
Query: 270 VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK----GSMTWTALIRAYG 325
+ + K+ ++ +YG +F A +F + K +T+ +I+ YG
Sbjct: 352 LFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYG 411
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
+ +A +L M S G PN T+ ++SI +AG ++ A F + + +E +
Sbjct: 412 KTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQV 471
Query: 386 HCTFMVQLLTRYGKLDEAQRFL 407
M+ R G + A+R L
Sbjct: 472 LYQTMIVAYERVGLMGHAKRLL 493
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 21/346 (6%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKR 144
SL + + R + L Q+ + + ++ GL G REA + +++LE+ +
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQV 361
Query: 145 PNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRL 204
PN +T ++ K L + + L++ +P+V SS++ Y K G++ ++ L
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSL 421
Query: 205 FDGMEKKNVI----LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
ME +NV+ + +ID + G A+ + + M+L + L ++
Sbjct: 422 LRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV---NH 478
Query: 261 LRRVKLGKEVHGQVLKL---GFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
L+R+ KEV G V + G LI+++ G + A + ++G M W
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG-MPW 537
Query: 318 TAL---IRAYGYKEWYREAID-LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
+ + G ++ + D + M G P+ TF +++ + G E + +D
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWD 597
Query: 374 LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL------EMSPSL 413
M + I+ S C +V +L GK++EA L E+ P+L
Sbjct: 598 KMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNL 643
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 117/301 (38%), Gaps = 40/301 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+SLI + FK G+ + A EE R V ++N +ISG+ G Y + M E
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMRE 566
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+G P+ T +++ KQG L + CG+
Sbjct: 567 KGIEPDIATFNIMMN-----SQRKQGDSEGILKLWDKM--------------KSCGI--- 604
Query: 201 SIRLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGE 260
K +++ ++ ENG + EA+ ++ M L + T L +
Sbjct: 605 ---------KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 261 LRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMT 316
+R + H +L G V LI G+ A +V G + +G ++T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMS 376
+ +L+ Y R+A+ + +MM G SPN T+ ++ AG +++ ++ M
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 377 T 377
+
Sbjct: 776 S 776
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 48/337 (14%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGK------ 167
+N +ISGL +G EA +++ M++ G P+ ++ ++ K+ + K
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 168 ----------------EVHAYALKRR------FLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+HA R F P V SS++ K G + L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 206 DGMEKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRM---LCVC 258
ME+ +V + +T ++DS + ALA+ M + D V T + L
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 259 GELRRVKLGKEV---HGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM 315
G+LR + ++ QV + V Y A L++ G +A+ + + +K +
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNV----VTYTA--LVDGLCKAGDLSSAEFIITQMLEKSVI 396
Query: 316 ----TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRF 371
T++++I Y K EA+ L M PN FT+ V+ +AG E A
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 372 FDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
M +E + +V L R G++ E + ++
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
++N +I+GL G +E + M G + +T ++ K Q +HA
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVENGFL 229
L+ P V +SL+ K G + ++ D M + N +T ++D + G++
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 230 NEALAVMRSMQLTRQRADTVTLTRML---CVCGELRR-VKLGKEVHGQVLKLGFASVHYV 285
NEA V+R M VT ++ CV G++ + + +++ + L S V
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 286 AAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLMM 341
+ Y D A V + +KG ++T+++LI+ + + +EA DL++ M+
Sbjct: 457 LSGFCRSYDV----DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLD 401
G P+ FT+ A+++ G +E A + + M + + ++ L + +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 402 EAQRFL 407
EA+R L
Sbjct: 573 EAKRLL 578
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 12/292 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLE 140
++LI+ + K GN A + E R SV + ++I + G A+E++ M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G PN T ++ ++ + + V F P V ++L+ + G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+I + + M++K +V+ ++ ++ + ++EAL V R M + DT+T + ++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSM- 315
E RR K +++ ++L++G + LIN Y G + A + + +KG +
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 316 ---TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGF 364
T++ LI + REA L + P+ T+ ++ C F
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 127/308 (41%), Gaps = 15/308 (4%)
Query: 113 SAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAK-LRTLKQGKEVHA 171
S ++ ++ + +AL V L G P ++ +L + R + + V
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 172 YALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVENG 227
L+ + P+V + L+ + G I ++ LFD ME K NV+ + +ID +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 228 FLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHY 284
+++ ++RSM L + ++ + LC G ++ V V ++ + G++
Sbjct: 255 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF---VLTEMNRRGYSLDEV 311
Query: 285 VAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLM 340
LI Y G F A ++ + G +T+T+LI + A++ D M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 341 MSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKL 400
G PN T+ ++ + G++ +A+R M+ S ++ GK+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 401 DEAQRFLE 408
++A LE
Sbjct: 432 EDAIAVLE 439
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 53/327 (16%)
Query: 94 RGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWIT 149
+ N+ A VF+E VS +N +I G G AL M +G PN +T
Sbjct: 183 KRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 150 MMVILPICAKLRTLKQG-KEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
++ KLR + G K + + ALK G+
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALK-------------------------------GL 271
Query: 209 EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTV---TLTRMLCVCGELRRVK 265
E N+I + +I+ G + E V+ M D V TL + C G +
Sbjct: 272 E-PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 266 LGKEVHGQVLKLGFASVHYVAAELI-------NMYGACGVFDNAKLVFGAVPDKGSMTWT 318
+ +H ++L+ G LI NM A D + V G P++ T+T
Sbjct: 331 V---MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR-VRGLCPNE--RTYT 384
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
L+ + K + EA + M NG SP+ T+ A+++ G +EDA + M
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK 444
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQR 405
+ + ++ R +DEA R
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALR 471
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 42/271 (15%)
Query: 114 AWNAMISGLAHNG--FPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHA 171
++N +I+ +G P A+E + ++ G RP+ IT +L C++ L +V
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 172 YALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNVILWTAMIDSCVENGFLNE 231
R P + ++++ +Y +CG+ + RLF +E K GF
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELK---------------GFF-- 364
Query: 232 ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
D VT +L R + KEV+ Q+ K+GF +I+
Sbjct: 365 --------------PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH 410
Query: 292 MYGACGVFD-------NAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNG 344
MYG G D + K + G PD ++T+T LI + G EA L M+ G
Sbjct: 411 MYGKQGQLDLALQLYKDMKGLSGRNPD--AITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Query: 345 CSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
P T+ A++ +AG E+A F M
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 11/200 (5%)
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
++ ++ CV N EA V ++L+ A M+ V +L + +V Q
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 275 LKLGFASVHYVAA----ELINMYGACGVFDNAKLVFGAVPDKGSM----TWTALIRAYGY 326
GF H+ + ++I YG ++ A+ V G + G TW +L+ AY
Sbjct: 743 ETKGF---HFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ 799
Query: 327 KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
Y A +F+ MM +G SP + +L G +E+ + + + + SK
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 387 CTFMVQLLTRYGKLDEAQRF 406
M+ R G + E ++
Sbjct: 860 ILLMLDAFARAGNIFEVKKI 879
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 149/338 (44%), Gaps = 16/338 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLE 140
++LI + +G ++ A ++ P + S +N +I+GL +G A E ML
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
G P+ T +L K + + ++V + R +P + SS+M ++++ G +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 201 SIRLFDGMEKKNVI----LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
++ F+ +++ +I ++T +I G ++ A+ + M D VT +L
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 257 VCGELRRVKLGK--EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDK-- 312
G +R LG+ ++ ++ + Y LI+ + G NA +F + +K
Sbjct: 454 --GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 313 --GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
+T+ L+ +G A +++ M+S P ++ +++ G + +AFR
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 371 FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+D M + I+ + C M++ R G + + FLE
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 134/343 (39%), Gaps = 34/343 (9%)
Query: 97 VDLARQVFEESPR----RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
++LA +FEE R V + M+ G +A ++ M E G PN +T
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF------- 205
++ K + + E+ L LP++ S+L+ + K G + + ++F
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 206 -------------DGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTV--- 249
D E+ NV+ + A++D ++ + EA ++ +M + + +
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 250 TLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
L LC G+L +EV ++ + GF + Y + LI+ Y D A V +
Sbjct: 679 ALIDGLCKVGKLDE---AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 310 PDKGS----MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFV 365
+ + +T +I EA L +M GC PN T+ A++ G +
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 366 EDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
E + M + + + ++ + G LD A LE
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 49/310 (15%)
Query: 115 WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYAL 174
+ +ISGL EA++++ M PN +T +L C + L + K V +
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 175 KRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMIDS-CVENGFL 229
P + +SL+ Y G Y+ +L M K +++ +I S C + L
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 230 N--------EALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV-KLGKEVHGQ------- 273
N +A + M + + + + + TR LC G+ + + +E+ GQ
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 274 ------------------------VLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV 309
+ + G + Y +++ + G+ + A+ F +
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 310 PDKGS----MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFV 365
+ G +T+TALI AY + A +LF+ M+S GC PN T+ A++ +AG V
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 366 EDAFRFFDLM 375
E A + F+ M
Sbjct: 605 EKACQIFERM 614
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 149/355 (41%), Gaps = 29/355 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFE--------------------ESPRRSVSAWNAMISGLAH 124
S+LI H K G V+ A Q+FE S R +V + A++ G
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 125 NGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTM 184
+ EA + + M EG PN I ++ K+ L + +EV + F +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 185 VSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQ 240
SSL+ Y K + ++ M + NV+++T MID + G +EA +M+ M+
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 241 LTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFD 300
+ + VT T M+ G + +++ E+ ++ G A + LI+ G D
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 301 NAKLVFGAVPDKGSMTWTALIRAY--GYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSI 358
A + + T TA R G+ + + E++ L D + + +P + ++
Sbjct: 832 VAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 359 CDRAGFVEDAFRFFDLMSTYEIEASKEHCTF--MVQLLTRYGKLDEA-QRFLEMS 410
+A +E A R + ++T+ T+ +++ L K++ A Q F EM+
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 147/332 (44%), Gaps = 17/332 (5%)
Query: 93 KRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
KRG++DLA + ++ + + +N +I L + +AL M +G RPN +
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ + + ++R+ P+V S+L+ + K G + + +L+D M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 209 EKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K+ ++ ++++I+ + L+EA + M + VT ++ + +RV
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF------GAVPDKGSMTWT 318
G E+ ++ + G LI+ + DNA++VF G +PD MT++
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD--IMTYS 470
Query: 319 ALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTY 378
L+ A+ +F+ + + P+ +T+ ++ +AG VED + F +S
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 379 EIEASKEHCTFMVQLLTRYGKLDEAQR-FLEM 409
++ + T M+ R G +EA F EM
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 139/338 (41%), Gaps = 24/338 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPR----RSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
S LI +R + LA V + + + N++++G H +A+ V M+E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFL-----PHVTMVSSLMVMYSKC 195
G +P+ T ++ + + A AL R + P + ++ K
Sbjct: 180 MGYQPDSFTFNTLIH-----GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 196 GVIGYSIRLFDGMEK----KNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTL 251
G I ++ L ME+ V+++ +ID+ +N+AL + M R + VT
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 252 TRML-CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP 310
++ C+C R + + + + +V +A LI+ + G A+ ++ +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA-LIDAFVKEGKLVEAEKLYDEMI 353
Query: 311 ----DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE 366
D T+++LI + + EA +F+LM+S C PN T+ ++ +A V+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 367 DAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQ 404
+ F MS + + T ++ + + D AQ
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 22/310 (7%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
+N +I+G ++ G A + + ML G PN +T ++ K+ ++
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV----ILWTAMIDSCVENGFL 229
+ P L+ K + + M++ V I +T MID +NGFL
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
+EA+ ++ M D VT + ++ ++ R K KE+ ++ ++G + + + L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 290 INMYGAC--GVFDNAKLVFGAVPDKGS----MTWTALIRAYGYKEWYREAIDLFDLMMSN 343
I Y C G A ++ A+ +G T+ L+ + EA + M S+
Sbjct: 520 I--YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTF-----MVQLLTRYG 398
G PNT +F+ +++ +G AF FD E+ H TF +++ L + G
Sbjct: 578 GILPNTVSFDCLINGYGNSGEGLKAFSVFD-----EMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 399 KLDEAQRFLE 408
L EA++FL+
Sbjct: 633 HLREAEKFLK 642
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 12/283 (4%)
Query: 93 KRGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
K DLAR + R V + MI GL NGF EA+ + M ++G P+ +
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ K+ K KE+ + P+ + S+L+ + G + +IR+++ M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 209 ----EKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
++ + ++ S + G + EA MR M +TV+ ++ G
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFG---AVPDK-GSMTWTAL 320
V ++ K+G + L+ G A+ AVP ++ + L
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAG 363
+ A +A+ LF M+ P+++T+ +++S R G
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 22/312 (7%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITM-MVILPICAKLRTLKQGKEV 169
++ +N ++ G + A+E + M +G + T M+I +C R + +G +
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR-IAKGYLL 325
Query: 170 HAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMIDSCVE 225
KR P+ ++L+ +S G + + +L + M N + + A+ID +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 226 NGFLNEALAV---MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASV 282
G EAL + M + LT L LC E L + + ++ + G
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF---DLARGFYMRMKRNGVCVG 442
Query: 283 HYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTALIRAYGYKEWYREAIDLFD 338
+I+ G D A ++ + G +T++ALI + ++ A ++
Sbjct: 443 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 502
Query: 339 LMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA-SKEHCTF--MVQLLT 395
+ G SPN + ++ C R G +++A R ++ M +E +++H TF +V L
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI---LEGHTRDHFTFNVLVTSLC 559
Query: 396 RYGKLDEAQRFL 407
+ GK+ EA+ F+
Sbjct: 560 KAGKVAEAEEFM 571
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 51/315 (16%)
Query: 105 EESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPIC------A 158
E R V + +++GL G +AL V M+EEG +P +I +C +
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT---IINGLCKMGDTES 59
Query: 159 KLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVI 214
L L + +E H A HV + ++++ K G ++ LF M K +VI
Sbjct: 60 ALNLLSKMEETHIKA-------HVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVI 112
Query: 215 LWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQV 274
++ MIDS +G +A ++R M + D VT + ++ + +V +E++G +
Sbjct: 113 TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREAI 334
L+ G ++T+ ++I + ++ +A
Sbjct: 173 LRRGIFPT-------------------------------TITYNSMIDGFCKQDRLNDAK 201
Query: 335 DLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLL 394
+ D M S CSP+ TF +++ +A V++ F M I A+ T ++
Sbjct: 202 RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 261
Query: 395 TRYGKLDEAQRFLEM 409
+ G LD AQ L +
Sbjct: 262 CQVGDLDAAQDLLNV 276
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 148/339 (43%), Gaps = 57/339 (16%)
Query: 87 LIQLHFKRGNVDLARQ----VFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
IQ +RG +D A + + E+ P+ V +N +I GL N +EA Y+ M+ EG
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
P+ T ++ K ++ + + A+ F+P SL+ G ++
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 203 RLFD-----GMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
LF+ G+ K NVIL+ +I G N+ + ++ + QL + ++
Sbjct: 377 ALFNEALGKGI-KPNVILYNTLI-----KGLSNQGM-ILEAAQLANEMSEK--------- 420
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTW 317
G + V+ + + K+G S A L+ + + G F PD T+
Sbjct: 421 -GLIPEVQTFNILVNGLCKMGCVSD---ADGLVKVMISKGYF----------PD--IFTF 464
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLS-ICDRAGFVEDAFRFFDLMS 376
LI Y + A+++ D+M+ NG P+ +T+ ++L+ +C + +F D+M
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS-------KFEDVME 517
Query: 377 TYEIEASKEHC-----TFMVQL--LTRYGKLDEAQRFLE 408
TY+ K C TF + L L RY KLDEA LE
Sbjct: 518 TYKTMVEK-GCAPNLFTFNILLESLCRYRKLDEALGLLE 555
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 147/360 (40%), Gaps = 49/360 (13%)
Query: 97 VDLARQVFE--ESPR--RSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
VD A +VFE ES R + +N MI G G ++A+E +R M G + IT M
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 153 ILPIC-----------------------------------AKLRTLKQGKEVHAYALKRR 177
++ C K L +G V +++
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 178 FLPHVTMVSSLMVMYSKCGVIGYSIRLF----DGMEKKNVILWTAMIDSCVENGFLNEAL 233
P+V + + L+ Y+K G + +IRL D K +V+ ++ +++ +NG + EAL
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 234 AVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY 293
+ + +++ + ++ G+ RV + + ++ + G Y LI+ +
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 294 GACGVFDNAKLVFGAVP-----DKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPN 348
D A +F + D+ T+T L+ + EA+ L+D+M+ G +P
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 349 TFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
F A+ + +G V A + D ++ + C M+ L + G++ EA + +
Sbjct: 538 AACFRALSTGLCLSGKVARACKILDELAPMGV-ILDAACEDMINTLCKAGRIKEACKLAD 596
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 120/304 (39%), Gaps = 14/304 (4%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
+VSA NA+I G E L R M E G P T ++ + + V
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVEN 226
R P + ++++ Y K G ++ ME + + I + MI +C +
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRM---LCVCGELRRVKLGKEVHGQVLKLGFASVH 283
+A+ + M + + + LC G+L G V +++ G
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNE---GYTVFENMIRKGSKPNV 362
Query: 284 YVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDL 339
+ LI+ Y G ++A + + D+G +T++ ++ EA+D F
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
+G + N+ + +++ +AG V++A R F+ MS ++ T++ K
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 400 LDEA 403
+DEA
Sbjct: 483 VDEA 486
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 144/328 (43%), Gaps = 12/328 (3%)
Query: 93 KRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
KRG++DLA + ++ + + A +N +I GL +AL M +G RP+
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ + + ++R+ P+V S+L+ + K G + + +L+D M
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 209 EKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K+ ++ ++++I+ + L+EA + M + VT + ++ + +RV
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTAL 320
+ G E+ ++ + G LI+ + DNA++VF + G +T+ L
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
+ +A+ +F+ + + P+ +T+ ++ +AG VED + F +S +
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQRFLE 408
+ M+ R G +EA L+
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 128/303 (42%), Gaps = 10/303 (3%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
+ +++++G H+ +A+ V M+E G +P+ T ++ + +
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMIDSCVEN 226
++R P + +++ K G I ++ L MEK +V+++ +ID +
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRML-CVCGELRRVKLGKEVHGQVLKLGFASVHYV 285
+++AL + M R D T + ++ C+C R + + + + +V
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 286 AAELINMYGACGVFDNAKLVFGAVP----DKGSMTWTALIRAYGYKEWYREAIDLFDLMM 341
+A LI+ + G A+ ++ + D T+++LI + + EA +F+LM+
Sbjct: 332 SA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 342 SNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLD 401
S C PN T+ ++ +A VE+ F MS + + T ++ + D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 402 EAQ 404
AQ
Sbjct: 451 NAQ 453
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 126/328 (38%), Gaps = 69/328 (21%)
Query: 87 LIQLHFKRGNVDLARQVF----EESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEG 142
+I + K G V A +F E+ V ++ ++IS A++G REA+ + M E+G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 143 KRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSI 202
+P IT VIL + K+ T P + S + M S
Sbjct: 239 CKPTLITYNVILNVFGKMGT-----------------PWNKITSLVEKMKS--------- 272
Query: 203 RLFDGMEKKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELR 262
DG+ + + +I C EA V M+ D VT +L V G+
Sbjct: 273 ---DGI-APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 263 RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIR 322
R K +V +++ GF+ +T+ +LI
Sbjct: 329 RPKEAMKVLNEMVLNGFSP-------------------------------SIVTYNSLIS 357
Query: 323 AYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEA 382
AY EA++L + M G P+ FT+ +LS +RAG VE A F+ M +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 383 SKEHCTF--MVQLLTRYGKLDEAQRFLE 408
+ CTF +++ GK E + +
Sbjct: 418 NI--CTFNAFIKMYGNRGKFTEMMKIFD 443
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 121/309 (39%), Gaps = 10/309 (3%)
Query: 108 PRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGK 167
P R +N +IS + G +A+ R ML+ G P+ T +L A+ +Q +
Sbjct: 487 PERET--FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 168 EVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY----SIRLFDGMEKKNVILWTAMIDSC 223
+V A R P+ SL+ Y+ IG + ++ G+ + +L ++ C
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 224 VENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVH 283
+ L EA ++ D TL M+ + G + V V + + GF
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 284 YVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTALIRAYGYKEWYREAIDLFDL 339
L+ M+ F ++ + + KG +++ +I AY R+A +F
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 340 MMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGK 399
M ++G P+ T+ + E+A M + ++ +V + +
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 400 LDEAQRFLE 408
DEA+ F+E
Sbjct: 785 KDEAKLFVE 793
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 134/312 (42%), Gaps = 39/312 (12%)
Query: 85 SSLIQLHFKRGNVDLA----RQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
++LI + + G+ + A R++ + +S +N +++ LA G E E V +E
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM-WEQSEKVLAEME 551
Query: 141 EGK-RPNWITMMVILPICAKLRTLKQGKEV---HAYA---LKRRFLPHVTMVSSLMVMYS 193
+G+ +PN +T C+ L GKE+ H+ A P ++ +L+++ S
Sbjct: 552 DGRCKPNELT------YCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 194 KCGVIGYSIRLFDGMEKKNVILWTAMIDSCVE-------NGFLNEALAVMRSMQLTRQRA 246
KC ++ + R F ++++ ++S V N L M+ T A
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Query: 247 DTVTLTRMLCVCGEL-RRVKLGKEVHGQVLK---LGFASVHYVAAELINMYGACGVFDNA 302
+L M + + ++ +E+ + +K + + +V Y M A +F
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 303 KLVFGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAV------L 356
+ G VPD +T+ I +Y + EAI + M+ +GC PN T+ ++ L
Sbjct: 726 RNS-GIVPD--VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKL 782
Query: 357 SICDRAG-FVED 367
+ D A FVED
Sbjct: 783 NRKDEAKLFVED 794
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 140/334 (41%), Gaps = 20/334 (5%)
Query: 86 SLIQLHFKRGNVDLARQVFEE----SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEE 141
SLI K G VD A +V+E+ R + + ++I ++G + + + M+ +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
P+ + + K ++G+ + RRF+P S L+ K G +
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 202 IRLFDGMEKKNVIL----WTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
LF M+++ +L + +ID + G +N+A ++ M+ VT ++
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 258 CGELRRVK----LGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++ R+ L +E + ++L + + LI+ +G G D A L+ + KG
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVV----IYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 314 SM----TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF 369
TW +L+ A E EA+ F M C+PN T+ +++ + AF
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 370 RFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
F+ M ++ S T M+ L + G + EA
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 127/306 (41%), Gaps = 9/306 (2%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
SV+ M+ G RE + V++M + RP + ++ + + +
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVEN 226
+ + P V + ++L+ ++K G + ++ L D M+ +++L+ IDS +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 227 GFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
G ++ A ++ + D VT T M+ V + R+ E+ + K Y
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 287 AELINMYGACGVFDNAKLVFGAVPDKGS----MTWTALIRAYGYKEWYREAIDLFDLMMS 342
+I YG+ G FD A + KGS + + ++ EA+ +F+ M
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDE 402
+ +PN T+ ++ + RAG ++ AF D M + + MV L + KLDE
Sbjct: 372 DA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 403 AQRFLE 408
A E
Sbjct: 431 ACAMFE 436
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 145/375 (38%), Gaps = 48/375 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFE--ESPRR--SVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+S+I + K +D A ++FE E RR A+N MI G G EA +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+G P+ I IL K+ + + +V +K+ P+++ + L+ M + G +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ L D M+K NV M+D ++ L+EA A+ M D +T ++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVF---------- 306
G++ RV +V+ ++L + V LI + G ++ ++
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 307 --------------GAVPDKG---------------SMTWTALIRAYGYKEWYREAIDLF 337
P+KG + +++ LI + E +LF
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 338 DLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRY 397
M GC +T + V+ + G V A++ + M T E + ++ L +
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 398 GKLDEAQRFLEMSPS 412
+LDEA E + S
Sbjct: 636 DRLDEAYMLFEEAKS 650
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 13/272 (4%)
Query: 142 GKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
G P+ T + ++ C K L++G +V K +F P + ++L+ +S
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 202 IRLFDGME----KKNVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
+ LF M+ + V L+T +I + G ++ AL+++ M+ + AD V +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG---- 313
G++ +V + + ++ G +I + D A +F +
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
+ + +I YG + EA L + + G P+ + +L+ + G V++A + F+
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE 367
Query: 374 LMSTYEIEASKEHCTF--MVQLLTRYGKLDEA 403
M +A+ T+ ++ +L R GKLD A
Sbjct: 368 EMKK---DAAPNLSTYNILIDMLCRAGKLDTA 396
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 129/328 (39%), Gaps = 47/328 (14%)
Query: 86 SLIQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRP 145
LI+ F +L + E+ A+N +I G G +A + + M +G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 146 NWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLF 205
+T ++ AK+ L + + A +R +V + SSL+ + K G I + +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 206 DGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGEL 261
+ + +K N+ W +++D+ V+ +NEAL +SM+ + + VT
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY---------- 730
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV--FDNAKLVFGAVPDKG----SM 315
LIN G C V F+ A + + + +G ++
Sbjct: 731 -------------------------GILIN--GLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 316 TWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
++T +I EA LFD +NG P++ + A++ DAF F+
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
Query: 376 STYEIEASKEHCTFMVQLLTRYGKLDEA 403
+ + C ++ L + L++A
Sbjct: 824 RRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 139/330 (42%), Gaps = 13/330 (3%)
Query: 93 KRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
KRG+ DLA + + + V +N +I GL +AL + M +G RPN +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ + + ++R+ P V S+L+ + K G + + +L+D M
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 209 EKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K+++ + ++++I+ + L+EA + M D VT ++ + +RV
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTAL 320
+ G EV ++ + G LI G D A+ +F + G MT+ L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
+ +A+ +F+ + + P +T+ ++ +AG VED + F +S +
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQR-FLEM 409
+ M+ R G +EA F EM
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 132/314 (42%), Gaps = 21/314 (6%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
++ +++++G H+ EA+ V M G +PN +T ++ K
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH-----GLFLHNKASE 204
Query: 171 AYALKRRFL-----PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEK----KNVILWTAMID 221
A AL R + P + ++ K G + L + ME+ V+++ +ID
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRML-CVCGELRRVKLGKEVHGQVLKLGFA 280
+ +++AL + + M+ R + VT + ++ C+C R + + + +
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVP----DKGSMTWTALIRAYGYKEWYREAIDL 336
V +A LI+ + G A+ ++ + D +T+++LI + + EA +
Sbjct: 325 DVFTFSA-LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTR 396
F+ M+S C P+ T+ ++ + VE+ F MS + + ++Q L +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 397 YGKLDEAQR-FLEM 409
G D AQ F EM
Sbjct: 444 AGDCDMAQEIFKEM 457
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 14/290 (4%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
V+L Q+ R +V +NA+++GL G +A +R M++ PN IT ++
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----N 212
K+ L + KE++ ++ P V SL+ G++ + ++F ME+ N
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML---CVCGELRRVKLGKE 269
+++T +I ++ + + + + M A+T+T T ++ C+ G R + +E
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG---RPDVAQE 384
Query: 270 VHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVP----DKGSMTWTALIRAYG 325
V Q+ L++ G + A ++F + D +T+T +I+
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 326 YKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLM 375
+A DLF + S G PN T+ ++S R G + +A F M
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 13/248 (5%)
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFD---GME-KKNVILWTAMIDSCVENGFL 229
+K F P + +SL+ Y I +I LFD GM K NV+ +T +I +N L
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAEL 289
N A+ + M R + VT ++ E+ R + ++K L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 290 INMYGACGVFDNAKLVFGAV------PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
I+ + G AK ++ + PD T+ +LI EA +F LM N
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPD--VFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
GC PN + ++ ++ VED + F MS + A+ T ++Q G+ D A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 404 QR-FLEMS 410
Q F +MS
Sbjct: 383 QEVFNQMS 390
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 272 GQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYK 327
G+++KLGF L+N Y ++A +F + G +T+T LIR
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 328 EWYREAIDLFDLMMSNGCSPNTFTFEAVLS-ICDRAGFVEDAFRFFDLMSTYEIEASKEH 386
A++LF+ M +NG PN T+ A+++ +C+ + + A+ D+M IE +
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVIT 260
Query: 387 CTFMVQLLTRYGKLDEAQ 404
T ++ + GKL EA+
Sbjct: 261 FTALIDAFVKVGKLMEAK 278
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 135/331 (40%), Gaps = 24/331 (7%)
Query: 93 KRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
+RG+ D AR++F E A NA++ G G EA E +RL ++G
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
++ + R Q E++A LK+ P + + + L+ SK G I +++L M
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSM 364
Query: 209 EKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K + + A+I + G L E ++ M T D T T ++C V
Sbjct: 365 PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV 424
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKL------------VFGAVPDK 312
+ +E+ ++ K G + LI+ G A+L +F +
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 313 GSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
G+ ++ ++ + + YR+ D G SP+ ++ +++ RAG ++ A +
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFAD----TGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 373 DLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
+++ + ++ L R G+ +EA
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 140/343 (40%), Gaps = 20/343 (5%)
Query: 87 LIQLHFKRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEG 142
+I + + DL Q EE VS + +IS A G +A+E M E
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 143 KRPNWITMMVILPICAKLRT-LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYS 201
RP+ T VIL + + V+ LK P++ LM K G +
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 202 IRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCV 257
++FD M + N + +T +I + G ++A + MQ + D+V +L
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 258 CGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG---- 313
+L R+ E+ K GF + LI+ + A ++ + K
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVL-SICDRAGFVEDAFRFF 372
+ +T LI+ +A+ L M S G SP+T+ + AV+ ++C R G +E+
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR-GLLEEGRSLQ 396
Query: 373 DLMSTYEIEASKEHCTFMVQL--LTRYGKLDEAQR-FLEMSPS 412
MS E E+ + CT + + + R G + EA+ F E+ S
Sbjct: 397 LEMS--ETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKS 437
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 142/336 (42%), Gaps = 45/336 (13%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE------SPRRSVSAWNAMISGLAHNGFPREALEYVRLM 138
SS I ++ K G++ A V++ SP +V + +I GL +G EA +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISP--NVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 139 LEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVI 198
L+ G P+ +T ++ K L+ G ++ +K + P V + L+ SK G++
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 199 ----GYSIRLFDGMEKKNVILWTAMIDS-CVENGFLNEALAVMRSMQLTRQRADTVTLTR 253
+S+++ + NV+++ ++ID C N F +EAL V R M + + D T T
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF-DEALKVFRLMGIYGIKPDVATFTT 536
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG 313
++ V R++ + ++ K+G PD
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLE-----------------------------PD-- 565
Query: 314 SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
++ + LI A+ + LFDLM N S + V+ + + +EDA +FF+
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 374 LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEM 409
+ ++E M+ +LDEA+R E+
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 97 VDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPI 156
+D R V E R + + N ++ GL+ + A + L+L+ G PN +T ++
Sbjct: 237 LDFHRLVMERGFRVGIVSCNKVLKGLSVDQI-EVASRLLSLVLDCGPAPNVVTFCTLING 295
Query: 157 CAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----N 212
K + + ++ +R P + S+L+ Y K G++G +LF K +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 213 VILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHG 272
V+++++ ID V++G L A V + M + VT T ++ + R+ ++G
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 273 QVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMTWTALIRAYGY------ 326
Q+LK G + LI+ + CG N + F D M + + YG
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCG---NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 327 -KEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKE 385
+ A+ M+ N F +++ R ++A + F LM Y I+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 386 HCTFMVQLLTRYGKLDEA 403
T ++++ G+L+EA
Sbjct: 533 TFTTVMRVSIMEGRLEEA 550
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 139/352 (39%), Gaps = 51/352 (14%)
Query: 103 VFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRT 162
V + P +V + +I+G G A + ++M + G P+ I ++ K
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 163 LKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG-----YSIRLFDGMEKKNVILWT 217
L G ++ + AL + V + SS + +Y K G + Y L G+ NV+ +T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-NVVTYT 395
Query: 218 AMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML---CVCGELRRVKLGKEVHGQV 274
+I ++G + EA + + VT + ++ C CG LR G ++ +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDM 452
Query: 275 LKLGFASVHYVAAELINMYGACGVFDNAKL----VFGAVPDKGSMTWTALIRAYGYKEWY 330
+K+G+ + L++ G+ +A + G + + +LI + +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 331 REAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVE------------------------ 366
EA+ +F LM G P+ TF V+ + G +E
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 367 -DAF----------RFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
DAF + FDLM +I A C ++ LL + ++++A +F
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 134/335 (40%), Gaps = 24/335 (7%)
Query: 88 IQLHFKRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNW 147
+ LH R +V + Q S R +V +N++I G EAL+ RLM G +P+
Sbjct: 476 LMLHAMRFSVKMLGQ----SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 148 ITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDG 207
T ++ + L++ + K P +L+ + K ++LFD
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 208 MEKKNVILWTAMIDSCVENGF----LNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRR 263
M++ + A+ + + F + +A ++ + D VT M+C LRR
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 264 VKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTA 319
+ + + + F LI++ D A +F + +KGS +T+
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 320 LIRAYGYKEWYREAID------LFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
L+ +W+ +++D LF+ M G SP+ ++ ++ + G V++A F
Sbjct: 712 LM------DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 765
Query: 374 LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
++ +++ + G+L EA E
Sbjct: 766 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 116 NAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALK 175
N +++ + P A ++ M++ G P+ +T ++ +++ + ++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 176 RRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME----KKNVILWTAMIDSCVENGFLNE 231
P V M ++++ K G + Y++ LFD ME + +V+++T++++ +G +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 232 ALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELIN 291
A +++R M + + D +T ++ + + +E++ +++++ A + LIN
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 292 MYGACGVFDNAKLVF------GAVPD-----------------------------KG--- 313
+ G D A+ +F G PD KG
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 314 -SMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFF 372
++T+T LI+ +G A ++F M+S G PN T+ +L G V+ A F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 373 DLMSTYEIEASKEHC-TFMVQL--LTRYGKLDEAQRFLE 408
+ M E++ + T+ V L L GKL++A E
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 146/339 (43%), Gaps = 42/339 (12%)
Query: 85 SSLIQLHFKRGNVDLARQVFEE----SPRRSVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+++I K G+V+ A +F++ R V + ++++GL ++G R+A +R M +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+P+ IT ++ K +E++ ++ P++ +SL+ + G +
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLC 256
+ ++F ME K +V+ +T++I+ + +++A+ + M +T+T T ++
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 257 VCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGSMT 316
G++ + + +EV ++ G VP T
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRG------------------------------VP-PNIRT 389
Query: 317 WTALIRAYGYKEWYREAIDLFDLMMS---NGCSPNTFTFEAVLSICDRAGFVEDAFRFFD 373
+ L+ Y ++A+ +F+ M +G +PN +T+ +L G +E A F+
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 374 LMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLEMSPS 412
M E++ T ++Q + + GK+ A PS
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 52/302 (17%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA-----WNAMISGLAHNGFPREALEYVRLML 139
++LIQ K ++ A ++F++ SV + + +MISG G REA + ML
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
G P +T V++ AK + +E+ + P V +SL+ Y + G +
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 200 YSIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
RL++ M + N ++ +I++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINA--------------------------------- 391
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV------ 309
+C E R +K +E+ GQ+ ++ +I+ + G + A ++ +
Sbjct: 392 -LCNENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF 369
PDK +T+T LI + K EA+ +F M++ GCSP+ T ++LS +AG ++A+
Sbjct: 450 PDK--ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 370 RF 371
Sbjct: 508 HL 509
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 127/302 (42%), Gaps = 52/302 (17%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA-----WNAMISGLAHNGFPREALEYVRLML 139
++LIQ K ++ A ++F++ SV + + +MISG G REA + ML
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 140 EEGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
G P +T V++ AK + +E+ + P V +SL+ Y + G +
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 200 YSIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
RL++ M + N ++ +I++
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINA--------------------------------- 391
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAV------ 309
+C E R +K +E+ GQ+ ++ +I+ + G + A ++ +
Sbjct: 392 -LCNENRLLK-ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF 369
PDK +T+T LI + K EA+ +F M++ GCSP+ T ++LS +AG ++A+
Sbjct: 450 PDK--ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 370 RF 371
Sbjct: 508 HL 509
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 131/306 (42%), Gaps = 22/306 (7%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLE 140
+SLI ++K G V LA +V + + +V ++ ++ G G EA + M
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGY 200
+G +PN + ++ K + + E+ ++ P V +SL+ + I +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 201 SIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LTR 253
++ L M + N + + +I++ + G + EA ++ M D +T L +
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 254 MLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGV------FDNAKLVFG 307
LC GE+ + + + ++L+ G A + LIN G+ F ++ G
Sbjct: 573 GLCRAGEVDK---ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 308 AVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVED 367
+ PD +T+ +LI + + +F + + G P+T TF ++S + GFV D
Sbjct: 630 STPD--IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 368 AFRFFD 373
A D
Sbjct: 688 ACLLLD 693
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 130/325 (40%), Gaps = 48/325 (14%)
Query: 93 KRGNVDLARQVFEESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMV 152
K G VD A+ +F P+ + +N +I G +G +A + M
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM-------------- 379
Query: 153 ILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK- 211
V +Y + +P V +SL+ Y K G++G ++ + M K
Sbjct: 380 ----------------VTSYGI----VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 212 ---NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGK 268
NV +T ++D + G ++EA V+ M + +TV ++ + R+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 269 EVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPD-------KGSMTWTALI 321
E+ ++ + G Y LI+ G C V D K + D ++T+ LI
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLIS--GLCEV-DEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 322 RAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
A+ + +EA L + M+ G + T+ +++ RAG V+ A F+ M
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 382 ASKEHCTFMVQLLTRYGKLDEAQRF 406
S C ++ L R G ++EA F
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEF 621
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 121/297 (40%), Gaps = 17/297 (5%)
Query: 126 GFPREALEYVRLMLEEGK----RPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPH 181
GFP + RLMLE P + + V+L I K V L R+ P
Sbjct: 160 GFPGQT---TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP- 215
Query: 182 VTMVSSLMVMYSKCGV--IGYSIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAV 235
T+ + +VM + C V I ++ L M K N +++ +I S + +NEAL +
Sbjct: 216 -TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 236 MRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMYGA 295
+ M L D T ++ + R+ ++ ++L GFA L+N
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 296 CGVFDNAKLVFGAVPDKGSMTWTALIRAYGYKEWYREA-IDLFDLMMSNGCSPNTFTFEA 354
G D AK +F +P + + LI + +A L D++ S G P+ T+ +
Sbjct: 335 IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 355 VLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL-EMS 410
++ + G V A M + + T +V + GK+DEA L EMS
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 51/360 (14%)
Query: 93 KRGNVDLARQVFEESPRRSVS----AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
+RG V+ ++++ +E + + +N +I+ +++M ++G N +
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 149 TMMVILPICAK-------------LRTLKQGKEVHAYA-----------LKRRFL----- 179
T +++ + K +R +VH Y +KR FL
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 180 ------PHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKKNV----ILWTAMIDSCVENGFL 229
P +L+ K G +G + L + M+ K V +++ +ID G +
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 230 NEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLG--FASVHYVAA 287
+EA + M+ +AD T + L+R K+ ++++ G ++V Y
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY--T 473
Query: 288 ELINMYGACGVFDNAKLVFGAVPDKG----SMTWTALIRAYGYKEWYREAIDLFDLMMSN 343
LI++Y G + AK +F + KG ++T+ +I AY + +EA L M +N
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 344 GCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA 403
G P+++T+ +++ A V++A R F M ++ + T M+ L++ GK DEA
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 135/329 (41%), Gaps = 18/329 (5%)
Query: 93 KRGNVDLARQVF----EESPRRSVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
KR +DL ++F + + +V + ++ GL G ++ + ++ +G +P
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T I+ K R + V K + + + LM + K G + + +LFD M
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 209 EKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGEL 261
++ +V ++T++I G + A + + + T L +C GE+
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 262 RRVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKG----SMTW 317
++ + ++ G V LI+ Y G+ D A +++ + KG T
Sbjct: 381 GAAEI---LMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 318 TALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMST 377
+ + + Y EA MM G +T ++ ++ + + G VE+A R F MS+
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 378 YEIEASKEHCTFMVQLLTRYGKLDEAQRF 406
++ + M+ + GK+ EA++
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKL 526
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 139/337 (41%), Gaps = 15/337 (4%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRR----SVSAWNAMISGLAHNGFPREALEYVRLMLE 140
++L+ ++FK G V+ A +FEE R +V + +I GL G EA + + ML
Sbjct: 272 TTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 141 EGKRPNWITMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLM-VMYSKCGVIG 199
+G P+ + + ++ I K+ +++ V + R P V ++++ ++ +
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 200 YSIRLFDGMEKKNV----ILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRML 255
FD M+ +V ++ +ID + + +AL ++ M ++
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHY-VAAELINMYGACGVFDNAKLVFGAVPDKGS 314
G+ +R + E+ + LK F +V V A +I +G CG A +F + ++GS
Sbjct: 452 NALGKAKRYEAANELFKE-LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 315 ----MTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFR 370
+ AL+ EA L M NGC + + +L+ R G A
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIE 570
Query: 371 FFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFL 407
F+ + I+ ++ G +EA R +
Sbjct: 571 MFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 147/344 (42%), Gaps = 28/344 (8%)
Query: 85 SSLIQLHFKRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLE 140
++LI K+G ++ A+ +F E + + A + +I+GL NG ++ E M E
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE 261
Query: 141 EGKRPNWITMMVIL-PICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIG 199
+G PN T ++ +C RT K +V +R ++ ++L+ + +
Sbjct: 262 DGVFPNLYTYNCVMNQLCKDGRT-KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN 320
Query: 200 YSIRLFDGMEKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVT---LT 252
+ ++ D M+ N+I + +ID G L +AL++ R ++ VT L
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 253 RMLCVCGELR-RVKLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLV------ 305
C G+ K+ KE+ + +K + V Y LI+ + + A +
Sbjct: 381 SGFCRKGDTSGAAKMVKEMEERGIKP--SKVTYTI--LIDTFARSDNMEKAIQLRLSMEE 436
Query: 306 FGAVPDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEA-VLSICDRAGF 364
G VPD T++ LI + K EA LF M+ C PN + +L C + G
Sbjct: 437 LGLVPD--VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYC-KEGS 493
Query: 365 VEDAFRFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEAQRFLE 408
A + M E+ + +M+++L + K EA+R +E
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 137/324 (42%), Gaps = 12/324 (3%)
Query: 93 KRGNVDLARQVFEESPRRSVSA----WNAMISGLAHNGFPREALEYVRLMLEEGKRPNWI 148
KRG++DLA + + + A ++ +I L +AL M +G RPN I
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 149 TMMVILPICAKLRTLKQGKEVHAYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGM 208
T ++ + + ++R+ P+V ++L+ + K G + + +L+D M
Sbjct: 297 TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
Query: 209 EKK----NVILWTAMIDSCVENGFLNEALAVMRSMQLTRQRADTVTLTRMLCVCGELRRV 264
K+ ++ ++++I+ + L+EA + M + VT ++ + +R+
Sbjct: 357 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 265 KLGKEVHGQVLKLGFASVHYVAAELINMYGACGVFDNAKLVFGAVPDKGS----MTWTAL 320
G E+ ++ + G LI+ + DNA++VF + G MT+ L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 321 IRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEI 380
+ +A+ +F+ + + P +T+ ++ +AG VED + F +S +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 381 EASKEHCTFMVQLLTRYGKLDEAQ 404
+ M+ R G +EA
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEAD 560
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 20/308 (6%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
S+ +++++G H +A+ V M+E G RP+ IT ++ K
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH-----GLFLHNKASE 208
Query: 171 AYALKRRFL-----PHVTMVSSLMVMYSKCGVIGYSIRLFDGME----KKNVILWTAMID 221
A AL R + P++ ++ K G I + L + ME + NV++++ +ID
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 222 SCVENGFLNEALAVMRSMQLTRQRADTVTLTRML-CVCGELRRVKLGKEVHGQVLKLGFA 280
S + ++AL + M+ R + +T + ++ C+C R + + + +
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 281 SVHYVAAELINMYGACGVFDNAKLVFGAVP----DKGSMTWTALIRAYGYKEWYREAIDL 336
+V A LI+ + G A+ ++ + D T+++LI + + EA +
Sbjct: 329 NVVTFNA-LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 337 FDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIEASKEHCTFMVQLLTR 396
F+LM+S C PN T+ +++ +A +++ F MS + + T ++ +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 397 YGKLDEAQ 404
D AQ
Sbjct: 448 ARDCDNAQ 455
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 10/161 (6%)
Query: 256 CVCGELRRVKLGKEVHGQVLKLGFASVHYVAAELINMY-GACGVFDNAKLV-----FGAV 309
C C ++ L + G+++KLG+ + L+N Y + D LV G
Sbjct: 129 CFC-RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 310 PDKGSMTWTALIRAYGYKEWYREAIDLFDLMMSNGCSPNTFTFEAVLSICDRAGFVEDAF 369
PD ++T+T LI EA+ L D M+ GC PN T+ V++ + G ++ AF
Sbjct: 188 PD--TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 370 RFFDLMSTYEIEASKEHCTFMVQLLTRYGKLDEA-QRFLEM 409
+ M +IEA+ + ++ L +Y D+A F EM
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 114 AWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVHAYA 173
+N ++ LA P + Y+ M E G + I ++ KL L +EV+
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 174 LKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGMEKK----NVILWTAMIDSCVENGFL 229
++ P V + L+ ++ G + ++ + M++ N +++ ++I + G+L
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 230 NEALAVMRSMQLT---RQRADTVTLTRMLCVCGELRRVKLGKEVHGQVLKLGFASVHYVA 286
+EA A+ R + + Q D T M+ + E V+ + + + + G A+ +
Sbjct: 662 DEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEAN-EFTF 720
Query: 287 AELINMYGACGVFDNAKLVFGAVPD----KGSMTWTALIRAYGYKEWYREAIDLFDLMMS 342
A ++ MY G F+ A + + + +++ +++ + ++EA++ F M+S
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Query: 343 NGCSPNTFTFEAVLSICDRAGFVEDAFRFFDLMSTYEIE 381
+G P+ TF+++ +I + G + A R + + EI+
Sbjct: 781 SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 21/261 (8%)
Query: 111 SVSAWNAMISGLAHNGFPREALEYVRLMLEEGKRPNWITMMVILPICAKLRTLKQGKEVH 170
S +N MI +G +EA E + MLEEG P +T ++ I L + +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 171 AYALKRRFLPHVTMVSSLMVMYSKCGVIGYSIRLFDGME----KKNVILWTAMIDSCVEN 226
+K P + L+ +++K I + F M+ K + + + ++ +
Sbjct: 357 K-TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIR 415
Query: 227 GFLNEALAVMRSMQLTRQRADTVT---LTRMLCVCGELRRV-KLGKEVH--GQVLKLGFA 280
+ EA ++ M D T LTRM L + K H G + G++
Sbjct: 416 HMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYS 475
Query: 281 SVHYVAAELINMYGACGVFDNAKLVF---GAVPDKGSMTWTALIRAYGYKEWYREAIDLF 337
+ I+ YG G A+ VF V + + + +I+AYG + +A +LF
Sbjct: 476 AN-------IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELF 528
Query: 338 DLMMSNGCSPNTFTFEAVLSI 358
+ MMS G +P+ T+ ++ I
Sbjct: 529 ESMMSYGVTPDKCTYNTLVQI 549