Miyakogusa Predicted Gene
- Lj3g3v0594230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0594230.1 tr|B9H2V0|B9H2V0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_758900 PE=4
SV=1,32.88,5e-19,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.40995.1
(244 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 8e-25
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 107 5e-24
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 107 9e-24
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 4e-22
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 5e-22
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-22
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-22
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 8e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 1e-21
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 99 3e-21
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 99 4e-21
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 4e-21
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 7e-21
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 96 2e-20
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 96 3e-20
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 4e-20
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 95 5e-20
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 6e-20
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 94 8e-20
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 94 8e-20
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 94 9e-20
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 94 1e-19
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 1e-19
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 92 2e-19
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-19
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 92 3e-19
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 92 5e-19
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-19
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 6e-19
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 91 8e-19
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 91 9e-19
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 9e-19
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 91 9e-19
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 89 4e-18
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 6e-18
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 7e-18
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 87 1e-17
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 86 3e-17
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 3e-17
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 4e-17
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 4e-17
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 4e-17
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 85 4e-17
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 85 5e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 5e-17
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 8e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 9e-17
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 83 1e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-16
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 2e-16
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 4e-16
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 82 5e-16
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 5e-16
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 6e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 6e-16
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 81 7e-16
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 8e-16
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 81 8e-16
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 9e-16
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-16
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 9e-16
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 80 2e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 2e-15
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 2e-15
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 4e-15
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 5e-15
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 78 5e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 5e-15
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 77 8e-15
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 8e-15
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 9e-15
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 9e-15
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 9e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 2e-14
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 3e-14
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 75 4e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 5e-14
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 6e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 7e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 9e-14
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 73 2e-13
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 2e-12
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 3e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 5e-12
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 8e-12
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 2e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 65 4e-11
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 7e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 2e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 56 3e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 52 5e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 51 6e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 7e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 49 4e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 49 4e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 5e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 48 6e-06
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 48 6e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 48 7e-06
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 7e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 48 7e-06
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 8e-06
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 8e-06
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 9e-06
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 88/141 (62%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y + E+A+ +Y M + D F P VLKAC I S Q+GE +H +V
Sbjct: 163 WNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLV 222
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF DV+V NAL++MY + G + AR +FD + KD VSW++M+ Y +GLL EALD
Sbjct: 223 KEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALD 282
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ + M G++P ++A+ S++
Sbjct: 283 IFRLMVQNGIEPDKVAISSVL 303
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 6/145 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++T Y+ + A+ I+ M + E D + SVL + + SF+ G ++H +V+
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVI 320
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G ++ V NALI++Y + G LG A +FD+M+ +D VSW+ +I ++ +N L
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLK 377
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
+ M A KP I +S++ + A
Sbjct: 378 YFEQMHRANAKPDGITFVSVLSLCA 402
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 111/206 (53%), Gaps = 25/206 (12%)
Query: 48 QQKPNVQLNLDQTQQIHGHFIK--------TCSS------------CSFQLPILALGYYS 87
Q KP + L Q QIH + IK C+S C F L +
Sbjct: 381 QTKP---MALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL--FEDFRNN 435
Query: 88 SGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
+ + ++ ++T+ +++ P ++++ M ++ E D + ++L+ C I S +LG +V
Sbjct: 436 ADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
H + +K G + F+ N LI MY + GSLG AR++FD M +DVVSWST+I Y ++G
Sbjct: 496 HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFG 555
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIV 233
+EAL L K+M+ AG++P+ + + ++
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVL 581
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +IT Y +N A+++Y M + D D F S++KAC+ LG+++H V+
Sbjct: 136 YTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVI 195
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K + NALI MY + A ++F + KD++SWS++I + + G EAL
Sbjct: 196 KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 213 LLKDMRVAGV-KPSE 226
LK+M GV P+E
Sbjct: 256 HLKEMLSFGVFHPNE 270
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 5/151 (3%)
Query: 97 ITSYIKNNCPENAVKIYTYMRRTDT---EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVK 153
I S K+N A++ + + ++ + + ++I S++ ACS S G ++HD ++
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--SLICACSSSRSLAQGRKIHDHILN 95
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
+ D + N ++ MYG+ GSL AR++FD M +++VS++++I Y +NG EA+ L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 214 LKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
M + P + A SI+ A +D+ L
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
+ +I S LKACS + G ++H +K+ G+ +L MY G L AR++F
Sbjct: 269 NEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVF 328
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
D++ D SW+ +I NG DEA+ + MR +G P I++ S++
Sbjct: 329 DQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 18/208 (8%)
Query: 55 LNLDQTQQIHGHFIKT------CSSCSFQLPILALGYYSSG-----------AAIYSFLI 97
L D QIHG IK+ + CS G+ +S A ++ +I
Sbjct: 284 LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVII 343
Query: 98 TSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH 157
N + AV +++ MR + D+ + S+L A + + G ++H +++K GF
Sbjct: 344 AGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 158 GDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEALDLLKD 216
D+ VCN+L+ MY L LF+ D VSW+T++ + ++ E L L K
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 217 MRVAGVKPSEIAMISIVHVLAELADLKL 244
M V+ +P I M +++ E++ LKL
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKL 491
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 85/150 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y +N ++++ MR + D + SV+ AC L+ +LG ++H +V+
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF D+ VCN+L MY GS A +LF +M KD+VSW+TMI Y N L D+A+D
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ M VKP EI + +++ A L DL
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ L+ Y K + A+ +Y M + D + P VL+ C IP G+EVH V
Sbjct: 163 WNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
V+ G+ D+ V NALI MY + G + AR LFD+M +D++SW+ MI Y NG+ E L
Sbjct: 223 VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL 282
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+L MR V P + + S++ L D +L
Sbjct: 283 ELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y N P+ A+ Y M + + D V +VL AC+ + G E+H +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K V V N LI MY + + A +F + K+V+SW+++I N EAL
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 213 LLKDMRV 219
L+ M++
Sbjct: 486 FLRQMKM 492
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E A+K+ M+ VD + ++++ C + + G +V+ + + V + NA
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAF 135
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPS 225
+ M+ G+L A +F KM +++ SW+ ++ Y + G DEA+ L M V GVKP
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 226 EIAMISIVHVLAELADL 242
++ + DL
Sbjct: 196 VYTFPCVLRTCGGIPDL 212
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 138 IPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTM 197
I + G+E+H V++ G D F+ NAL+ MY G + A F+ KDV SW+ +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNIL 569
Query: 198 IRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+ Y G ++L M + V+P EI IS++
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLL 605
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y +NN ++A+ +Y+ M+ DSF P +LKACS + Q+G VH V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFD--KMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ GF DVFV N LI +Y + LG AR +F+ + + +VSW+ ++ +Y +NG EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L++ MR VKP +A++S+++ L DLK
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK 239
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 82/142 (57%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I+ Y KN A+ ++ M D D+ + S + AC+ + S + ++++V
Sbjct: 290 LWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ + DVF+ +ALI M+ + GS+ AR +FD+ + +DVV WS MI YG +G EA+
Sbjct: 350 GRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAI 409
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
L + M GV P+++ + ++
Sbjct: 410 SLYRAMERGGVHPNDVTFLGLL 431
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 84/151 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++++Y +N P A++I++ MR+ D + D + SVL A + + + G +H VV
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G + + +L MY + G + A+ LFDKM +++ W+ MI Y +NG EA+D
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ +M V+P I++ S + A++ L+
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLE 340
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 145 EEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN 204
+++H ++ G F+ LI G + +ARQ+FD + + W+ +IR Y RN
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 205 GLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+AL + +M++A V P ++ + L+ L++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT+Y+KN P+ A +++ M+ D + + F + ++L+A + + S +G VHD+
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
KNGF D F+ ALI MY + GSL AR++FD M GK + +W++MI S G +G +EAL
Sbjct: 279 KNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALS 338
Query: 213 LL-KDMRVAGVKPSEIAMISIVHVLAELADLK 243
L + A V+P I + ++ A ++K
Sbjct: 339 LFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 32/184 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I S N+ P A+ ++ M + ++ D F P V+KAC S +LG +VH
Sbjct: 86 WNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLA 145
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWST--------------- 196
+K GF DVF N L+ +Y + G R++FDKM G+ +VSW+T
Sbjct: 146 IKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAE 205
Query: 197 ----------------MIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
MI +Y +N DEA L + M+V VKP+E +++++ +L
Sbjct: 206 IVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLG 265
Query: 241 DLKL 244
L +
Sbjct: 266 SLSM 269
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 85/142 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y +N E+A+ ++ M++++ + + +L AC+ + + LG+ VHD V
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
F ++V ALI MY + GS+ AR+LFD M K+ V+W+TMI YG +G EAL+
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 213 LLKDMRVAGVKPSEIAMISIVH 234
+ +M +G+ P+ + + +++
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLY 529
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRR-TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++ L+ + N P +++ ++ ++R+ TD + +S + A S + G +H
Sbjct: 85 LFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQ 144
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V +G ++ + + ++ MY + + AR++FD+M KD + W+TMI Y +N + E+
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 211 LDLLKDM-RVAGVKPSEIAMISIVHVLAELADLKL 244
+ + +D+ + + ++ I+ +AEL +L+L
Sbjct: 205 IQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYT-YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++ +I+ Y KN +++++ + + T +D+ + +L A + + +LG ++H
Sbjct: 187 LWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSL 246
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G + +V I +Y + G + LF + D+V+++ MI Y NG + +
Sbjct: 247 ATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELS 306
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
L L K++ ++G + ++S+V V L
Sbjct: 307 LSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP---SFQLGEEVHD 149
Y+ +I Y N E ++ ++ + + + S + SL+P L +H
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL------VSLVPVSGHLMLIYAIHG 343
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ +K+ F V AL +Y + + AR+LFD+ K + SW+ MI Y +NGL ++
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
A+ L ++M+ + P+ + + I+ A+L L L
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSL 438
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 79/140 (56%)
Query: 104 NCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVC 163
N E A+ +Y M+ + + D F V AC+ + +G VH + K G DV +
Sbjct: 111 NDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
++LIMMY + G +GYAR+LFD++ +D VSW++MI Y G +A+DL + M G +
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 224 PSEIAMISIVHVLAELADLK 243
P E ++S++ + L DL+
Sbjct: 231 PDERTLVSMLGACSHLGDLR 250
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 77/152 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y + ++A+ ++ M E D + S+L ACS + + G + + +
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
F+ + LI MYG+ G L AR++F++M+ KD V+W+ MI Y +NG EA
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L +M GV P + +++ + L+L
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y +N A K++ M +T D+ + +VL AC + + +LG+++
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ +++V L+ MYG+ G + A ++F+ M K+ +W+ MI +Y G EAL
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALL 421
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M V PS+I I ++
Sbjct: 422 LFDRM---SVPPSDITFIGVL 439
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 11/189 (5%)
Query: 56 NLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTY 115
+L + ++IHG + S Q PI A +++ ++ SYI++ P +A+++Y
Sbjct: 59 SLARVRRIHGDIFR--SRILDQYPI---------AFLWNNIMRSYIRHESPLDAIQVYLG 107
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGS 175
M R+ D + +P V+KA I F LG+E+H V+ GF GD F + I +Y + G
Sbjct: 108 MVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGE 167
Query: 176 LGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHV 235
AR++FD+ + + SW+ +I G +EA+++ DM+ +G++P + M+S+
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTAS 227
Query: 236 LAELADLKL 244
L DL L
Sbjct: 228 CGGLGDLSL 236
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV--KNGFHGDVFVCNAL 166
AV+++ M+R+ E D F + SV +C + L ++H V+ K D+ + N+L
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
I MYG+ G + A +F++M ++VVSWS+MI Y NG EAL+ + MR GV+P++
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 227 IAMISIV 233
I + ++
Sbjct: 322 ITFVGVL 328
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 77/140 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI SYI+N + +V +Y M D F PSV+KAC+ + F G VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ +++VCNALI MY G + AR+LFD+M +D VSW+ +I Y L EA
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 213 LLKDMRVAGVKPSEIAMISI 232
LL M ++GV+ S + +I
Sbjct: 272 LLDRMYLSGVEASIVTWNTI 291
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+ ++ +I+ + N E + M + + + S+L + + + Q G+E H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 151 VVKNGFHGDVFV-CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+++ + D + N+L+ MY + G + A+++FD M +D V+++++I YGR G +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
AL KDM +G+KP + M++++
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVL 532
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN-GFHGDV-FVCNALIMMYGEG 173
MR + + S + + LKACS I + + G+ H V+++ F D+ V N+LI MY
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
L +A +F ++ + +W+++I + N +E LLK+M ++G P+ I + SI+
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 234 HVLAELADLK 243
+ A + +L+
Sbjct: 431 PLFARVGNLQ 440
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 77/140 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI SYI+N + +V +Y M D F PSV+KAC+ + F G VH +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ +++VCNALI MY G + AR+LFD+M +D VSW+ +I Y L EA
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 213 LLKDMRVAGVKPSEIAMISI 232
LL M ++GV+ S + +I
Sbjct: 272 LLDRMYLSGVEASIVTWNTI 291
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+ ++ +I+ + N E + M + + + S+L + + + Q G+E H +
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 151 VVKNGFHGDVFV-CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+++ + D + N+L+ MY + G + A+++FD M +D V+++++I YGR G +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
AL KDM +G+KP + M++++
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVL 532
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN-GFHGDV-FVCNALIMMYGEG 173
MR + + S + + LKACS I + + G+ H V+++ F D+ V N+LI MY
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
L +A +F ++ + +W+++I + N +E LLK+M ++G P+ I + SI+
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 234 HVLAELADLK 243
+ A + +L+
Sbjct: 431 PLFARVGNLQ 440
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 87/143 (60%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A+++ LI+ Y++N+ E A+ +Y M+ + + SVLKACS + + +LG++VH
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+K+GF +V + +AL MY + GSL +F + KDVVSW+ MI NG DEA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L+L ++M G++P ++ ++I+
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNII 531
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 87/152 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S ++T Y +N AVK+++ M + + + VL ACS I + G+++H F++
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF +F AL+ MY + G L AR+ FD + +DV W+++I Y +N +EAL
Sbjct: 350 KLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L + M+ AG+ P++ M S++ + LA L+L
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYT-YMRRTDTEVDS-FIVPSVLKACSLIPSFQLGEEVHDF 150
+S +++ Y E A+K++ ++R + DS ++ +VL + + LG ++H
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+KNG G V + NAL+ MY + SL A ++FD ++ ++WS M+ Y +NG EA
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ L M AG+KPSE ++ +++ +++ L+
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 24 QNSNQPQSPTL--KFTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKTCSSCSFQLPIL 81
Q P + TL K TH QQ+ NL + +HG I+T +S Q +
Sbjct: 7 QTELNPHTSTLLKKLTHHS-------QQR-----NLVAGRAVHGQIIRTGASTCIQHANV 54
Query: 82 ALGYYSSGAAI-----------------YSFLITSYIKNNCPENA---VKIYTYMRRTDT 121
+ +Y+ + ++ LIT Y +N ++ ++++ MR D
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 122 EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQ 181
+++ + + KA S + S +G + H VVK GD++V +L+ MY + G + +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
+F M ++ +WSTM+ Y G ++EA+ +
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G VH +++ G + N L+ Y + G L A +F+ ++ KDVVSW+++I Y +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 204 NGLLDEA---LDLLKDMRVAGVKPSEIAMISI 232
NG + + + L ++MR + P+ + I
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 83/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y ++ A++++ M R ++ S L C+ + + +LG+++H +V
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G+ FV NAL++MY + GS+ A LF +M GKD+VSW+TMI Y R+G + AL
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALR 496
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M+ G+KP + M++++
Sbjct: 497 FFESMKREGLKPDDATMVAVL 517
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 79 PILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLI 138
P+L G S ++ I+SY++ A++++ M R + + ++ L+
Sbjct: 55 PLLKCG--DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN---- 108
Query: 139 PSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMI 198
F+L ++ D + + D+ N +I Y +LG AR+LF+ M +DV SW+TM+
Sbjct: 109 GEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTML 164
Query: 199 RSYGRNGLLDEALDLLKDM 217
Y +NG +D+A + M
Sbjct: 165 SGYAQNGCVDDARSVFDRM 183
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +++ YI+N E A +++ M R + ++ + V ++ +E+ D +
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG-----ERMEMAKELFDVM 338
Query: 152 -VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+N V N +I Y + G + A+ LFDKM +D VSW+ MI Y ++G EA
Sbjct: 339 PCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L L M G + + + S + A++ L+L
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALEL 427
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVL-----KACSLIPSFQLGEE 146
++ +++ Y +N C ++A ++ M + D ++ + V +AC L S +
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 147 VHDFVVKNGFHG-----------------DVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
V + GF DV N +I Y + G + ARQLFD+ +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDM 217
DV +W+ M+ Y +N +++EA +L M
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 8/123 (6%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I+ Y++N E A K++ M D + ++ ++ +L + +L E + +
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPE--- 154
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
DV N ++ Y + G + AR +FD+M K+ VSW+ ++ +Y +N ++EA
Sbjct: 155 -----RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 213 LLK 215
L K
Sbjct: 210 LFK 212
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 71/135 (52%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI SY KN E + Y M D+F PSVLKAC G VH +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ + ++VCNALI MY ++G AR+LFD+M +D VSW+ +I Y G+ EA +
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 213 LLKDMRVAGVKPSEI 227
L M +GV+ S I
Sbjct: 232 LFDKMWFSGVEVSVI 246
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 77/135 (57%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A+ + + MR T +D + LKACSLI + +LG+E+H + + + G V N LI
Sbjct: 264 ALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLIT 323
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
MY + L +A +F + + +W+++I Y + +EA LL++M VAG +P+ I
Sbjct: 324 MYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 229 MISIVHVLAELADLK 243
+ SI+ + A +A+L+
Sbjct: 384 LASILPLCARIANLQ 398
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y + N E A + M + +S + S+L C+ I + Q G+E H +++
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYIL 408
Query: 153 KNGFHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ D + N+L+ +Y + G + A+Q+ D M +D V+++++I YG G AL
Sbjct: 409 RRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVAL 468
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
L K+M +G+KP + +++++
Sbjct: 469 ALFKEMTRSGIKPDHVTVVAVL 490
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 82/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LIT + N PE + +++ MR + D + VL ACS + + G H + V
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+G+ + +CNAL+ MY + G L A+++FD M +D+VSW+TM+ +G +GL EAL
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M+ GV P E+ +++I+
Sbjct: 497 LFNSMQETGVNPDEVTLLAIL 517
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ +I +Y N+ E A+ +Y M + + P VLKAC+ + + G+ +H V
Sbjct: 71 WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVN 130
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ F D++VC AL+ Y + G L A ++FD+M +D+V+W+ MI + + L + +
Sbjct: 131 CSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIG 190
Query: 213 LLKDM-RVAGVKPSEIAMISIVHVLAELADLK 243
L DM R+ G+ P+ ++ + L L+
Sbjct: 191 LFLDMRRIDGLSPNLSTIVGMFPALGRAGALR 222
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD--TEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+S +I Y++N + A +++ M D V + +L C+ G VH +
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
VK GF D+ V N +I Y + GSL A + F ++ KDV+S++++I N +E+
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEES 393
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L +MR +G++P ++ ++ + LA L
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAAL 425
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 15/148 (10%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSF------QLGEE 146
++ +I+ + + C + + ++ MRR D + P++ + P+ + G+
Sbjct: 172 WNAMISGFSLHCCLTDVIGLFLDMRRIDG-----LSPNLSTIVGMFPALGRAGALREGKA 226
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH + + GF D+ V ++ +Y + + YAR++FD K+ V+WS MI Y N +
Sbjct: 227 VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 207 LDEA----LDLLKDMRVAGVKPSEIAMI 230
+ EA +L + VA V P I +I
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTPVAIGLI 314
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%), Gaps = 23/235 (9%)
Query: 14 PFLHTSIEKSQNSNQPQSPTLKFTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKTCSS 73
PF+ ++ S N N+ L+ H + L LD + G I S
Sbjct: 8 PFISRALSSSSNLNE-----LRRIHALV-----------ISLGLDSSDFFSGKLIDKYSH 51
Query: 74 CSFQLPILALGYY-----SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIV 128
F+ P +L + + +++ +I ++ KN A++ Y +R + D +
Sbjct: 52 --FREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTF 109
Query: 129 PSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG 188
PSV+KAC+ + ++G+ V++ ++ GF D+FV NAL+ MY G L ARQ+FD+M
Sbjct: 110 PSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV 169
Query: 189 KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+D+VSW+++I Y +G +EAL++ +++ + + P + S++ L +K
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 84/142 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I++ ++ +++ T MR+++ D L C+ + + +LG+E+H ++
Sbjct: 477 WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G+ ++ + NALI MY + G L + ++F++M +DVV+W+ MI +YG G ++AL+
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 213 LLKDMRVAGVKPSEIAMISIVH 234
DM +G+ P + I+I++
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIY 618
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ +I Y+K E +V+++ + D + D V SVL+AC + L + +++++
Sbjct: 276 YNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K GF + V N LI +Y + G + AR +F+ M KD VSW+++I Y ++G L EA+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L K M + + I + ++ V LADLK
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ YI++ A+K++ M + + D ++ + + + G+ +H +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G D+ V NALI MY + G +G + ++F M D V+W+T+I + R G L
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ MR + V P + + + A LA +L
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y + E A++IY ++ + DSF V SVL A + + G+ +H F +
Sbjct: 175 WNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL 234
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G + V V N L+ MY + AR++FD+M +D VS++TMI Y + +++E++
Sbjct: 235 KSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR 294
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ + + KP + + S++ L DL L
Sbjct: 295 MFLE-NLDQFKPDLLTVSSVLRACGHLRDLSL 325
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 22/195 (11%)
Query: 61 QQIHGHFIKT--CSSCSFQLPILALGYYSSGAAI----------------YSFLITSYIK 102
++IHG+ I++ C S Q IL + Y+ ++ +S +I SY++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCM--YADSDSLSARKLFDEMSERDVISWSVVIRSYVQ 202
Query: 103 NNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH-GDV 160
+ P +K++ M TE D V SVLKAC+++ +G VH F ++ GF DV
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADV 262
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
FVCN+LI MY +G + A ++FD+ +++VSW++++ + N DEAL++ M
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 221 GVKPSEIAMISIVHV 235
V+ E+ ++S++ V
Sbjct: 323 AVEVDEVTVVSLLRV 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH-GDVFVCNA 165
+ A+ I+ +MR T ++ V S+L ACS+ + + H ++ D+ V +
Sbjct: 411 DEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
++ Y + G++ AR+ FD++ K+++SW+ +I +Y NGL D+AL L +M+ G P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 226 EIAMIS 231
+ ++
Sbjct: 528 AVTYLA 533
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E + ++ +R E ++ + V+ AC + + GE++H +V+++GF G V N++
Sbjct: 109 EEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSI 166
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPS 225
+ MY + SL AR+LFD+M +DV+SWS +IRSY ++ L L K+M A +P
Sbjct: 167 LCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPD 225
Query: 226 EIAMISIVHVLAELADLKL 244
+ + S++ + D+ +
Sbjct: 226 CVTVTSVLKACTVMEDIDV 244
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ ++ N + A++++ M + EVD V S+L+ C + +H ++
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G+ + ++LI Y + A + D M KDVVS STMI G DEA+
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ MR P+ I +IS+++ + ADL+
Sbjct: 416 IFCHMRDT---PNAITVISLLNACSVSADLR 443
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y KN A+ ++ + D V VL AC+ + +F G E+H ++
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++NG+ D V N+L+ MY + G+L A LFD + KD+VSW+ MI YG +G EA+
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLA 237
L MR AG++ EI+ +S+++ +
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACS 611
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ L+ K+ ++ ++ M + E+DS+ V K+ S + S GE++H
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
F++K+GF V N+L+ Y + + AR++FD+M +DV+SW+++I Y NGL ++
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L + M V+G+ EI + +IV V A AD +L
Sbjct: 280 GLSVFVQMLVSGI---EIDLATIVSVFAGCADSRL 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y+ N E + ++ M + E+D + SV C+ LG VH V
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K F + CN L+ MY + G L A+ +F +M + VVS+++MI Y R GL EA+
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAE 238
L ++M G+ P + ++++ A
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCAR 409
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I Y + AVK++ M D + V +VL C+ G+ VH+++
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+N D+FV NAL+ MY + GS+ A +F +M KD++SW+T+I Y +N +EAL
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 213 LL 214
L
Sbjct: 485 LF 486
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
ENAVK+ + D +D + SVL+ C+ S + G+EV +F+ NGF D + + L
Sbjct: 78 ENAVKLLCVSGKWD--IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL 135
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
+MY G L A ++FD++ + + W+ ++ ++G ++ L K M +GV+
Sbjct: 136 SLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 107 ENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNA 165
E A +Y M R ++ D P VLKAC+ I F G++VH +VK+GF GDV+V N
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
LI +YG G L AR++FD+M + +VSW++MI + R G D AL L ++M+ + +P
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPD 250
Query: 226 EIAMISIVHVLAELADLKL 244
M S++ A L L L
Sbjct: 251 GYTMQSVLSACAGLGSLSL 269
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 81/146 (55%), Gaps = 6/146 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + ++ ++A++++ M+R+ E D + + SVL AC+ + S LG H F++
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLL 278
Query: 153 KN---GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ DV V N+LI MY + GSL A Q+F M +D+ SW+ MI + +G +E
Sbjct: 279 RKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 210 ALDLLKDM--RVAGVKPSEIAMISIV 233
A++ M + V+P+ + + ++
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLL 364
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 2/140 (1%)
Query: 96 LITSYIK-NNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
LIT + + NNC +A I+ M R T++D +V S+LK C+ I S +G ++H F +K+
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 155 G-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
DV + N+LI MY + G + A F++M KDV SW+++I YGR+G ++A+DL
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 214 LKDMRVAGVKPSEIAMISIV 233
M +KP+++ +S++
Sbjct: 406 YNRMEHERIKPNDVTFLSLL 425
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ + + +A+ ++ M R D + + F SVLK+C + + G ++H V
Sbjct: 81 WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G++ V +AL+ +Y G + AR FD M +D+VSW+ MI Y N D +
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 213 LLKDMRVAGVKP 224
L + M G KP
Sbjct: 201 LFQLMLTEGKKP 212
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%)
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H + NGF ++ + + LI +Y + G + +AR+LFD++ +DVVSW+ MI + R G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+AL L K+M VK ++ S++ +L LK
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLK 130
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y N C + + ++ M + D F S+L+A ++ ++ E+H +
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG-RNGLLDEAL 211
K GF + +L+ Y + GSL A +L + +D++S + +I + +N +A
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
D+ KDM K E+ + S++ + +A + +
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTI 334
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 75/120 (62%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
D+F PS+LKAC+ + G +H V+ NGF D ++ ++L+ +Y + G L +AR++F
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVF 104
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++M +DVV W+ MI Y R G++ EA L+ +MR G+KP + ++ ++ + E+ L+
Sbjct: 105 EEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ 164
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 80/131 (61%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ ++ E A+ +++ M ++ +++ S + SV+ +C+ + SF LG VH +V+
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++G+ D N+LI MY + G L + +F++M +D+VSW+ +I Y +N L +AL
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 213 LLKDMRVAGVK 223
L ++M+ V+
Sbjct: 434 LFEEMKFKTVQ 444
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 83/142 (58%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMR-RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ Y +N A+ ++ M+ +T +VDSF V S+L+ACS + +G+ +H V
Sbjct: 415 WNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIV 474
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+++ V AL+ MY + G L A++ FD + KDVVSW +I YG +G D AL
Sbjct: 475 IRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIAL 534
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
++ + +G++P+ + ++++
Sbjct: 535 EIYSEFLHSGMEPNHVIFLAVL 556
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 34/212 (16%)
Query: 67 FIKTCSSC---SFQLPI---LALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTD 120
+K C+S SF L I + + +SS I S L+ Y K +A K++ MR D
Sbjct: 52 LLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD 111
Query: 121 TEVDSFIVPS------VLKACSLIPSFQLG----------------------EEVHDFVV 152
+ ++ V +ACSL+ + + +HDF V
Sbjct: 112 VVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAV 171
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF D+ V N+++ +Y + +G A+ LFD+M +D+VSW+TMI Y G + E L
Sbjct: 172 IYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILK 231
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
LL MR G++P + + + V + DL++
Sbjct: 232 LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y +K+ MR D + L + ++G +H +V
Sbjct: 213 WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF D+ + ALI MY + G + ++ + + KDVV W+ MI R G ++AL
Sbjct: 273 KTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALI 332
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ +M +G S A+ S+V A+L L
Sbjct: 333 VFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 82/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y +N E A++ + M ++ + D F +VL ACS + G+ +H ++
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLI 364
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF G +V NAL+ +Y + G + A + F + KD+VSW+TM+ ++G +GL D+AL
Sbjct: 365 HCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L +M +G+KP + I ++
Sbjct: 425 LYDNMIASGIKPDNVTFIGLL 445
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++TSY + + A+ ++T +R +D + D + ++L C+ + + + G ++ V+
Sbjct: 38 WNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVI 97
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV--GKDVVSWSTMIRSYGRNGLLDEA 210
++GF + V N+LI MYG+ A ++F M ++ V+W +++ +Y + A
Sbjct: 98 RSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAA 157
Query: 211 LDLLKDM--RVA 220
LD+ +M RVA
Sbjct: 158 LDVFVEMPKRVA 169
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
I + G + ARQ+FD M D V+W+TM+ SY R GL EA+ L +R + KP +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 227 IAMISIVHVLAELADLKL 244
+ +I+ A L ++K
Sbjct: 71 YSFTAILSTCASLGNVKF 88
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 86/150 (57%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
GY A ++ +I+ Y +N E ++ M + ++ V S+L ACS I S L
Sbjct: 480 GYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G+++H F ++ +VFV +AL+ MY + G++ YA +F + ++ V+++TMI YG+
Sbjct: 540 GKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQ 599
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+G+ + A+ L M+ +G+KP I ++++
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVL 629
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 92 IYSFLITSYIKNNCPENAVKIY-TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++ +I Y++N+C +++++ + + D A S + +LG + H F
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V KN + + N+L++MY GS+ + +F M +DVVSW+TMI ++ +NGL DE
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L L+ +M+ G K I I++ +L+ ++L+
Sbjct: 404 LMLVYEMQKQGFK---IDYITVTALLSAASNLR 433
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 59 QTQQIHGHFIKTCSSCSFQLPILALGYYSS----GAAIYSFLITSYIKNNCPENAVKIYT 114
QT I K C + P LA + + +++ +I +I NN P A+ Y+
Sbjct: 38 QTPSIRSRLSKICQDGN---PQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 115 YMRRTD--TEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMY-- 170
M++T T D++ S LKAC+ + + G+ VH +++ + V N+L+ MY
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 171 ----GEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+ R++FD M K+VV+W+T+I Y + G EA M VKPS
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Query: 227 IAMISI 232
++ +++
Sbjct: 215 VSFVNV 220
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+++++N + + + M++ ++D V ++L A S + + ++G++ H F++
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 153 KNG--FHGDVFVCNALIMMYGEGGSLGYARQLFDK--MVGKDVVSWSTMIRSYGRNGLLD 208
+ G F G + + LI MY + G + +++LF+ +D +W++MI Y +NG +
Sbjct: 447 RQGIQFEG---MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ + + M ++P+ + + SI+ +++ + L
Sbjct: 504 KTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDL 539
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y+K A + + M R + + +V A S+ S + + ++
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 153 KNG--FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G + D+FV ++ I MY E G + +R++FD V +++ W+TMI Y +N L E+
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
++L + + EI + ++LA A
Sbjct: 302 IELF----LEAIGSKEIVSDEVTYLLAASA 327
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y C A+ + M+ E D + SVL +C+ + S +LG+ +H +
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE 268
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ GF VCNALI MY + G + A QLF +M GKDV+SWSTMI Y +G A++
Sbjct: 269 RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIE 328
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+M+ A VKP+ I + ++
Sbjct: 329 TFNEMQRAKVKPNGITFLGLL 349
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 32/185 (17%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDF 150
+Y+ +I +Y N+ + ++IY + R E+ D F P + K+C+ + S LG++VH
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 134
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG----- 205
+ K G V NALI MY + L A ++FD+M +DV+SW++++ Y R G
Sbjct: 135 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 206 ------LLD--------------------EALDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
+LD EA+D ++M++AG++P EI++IS++ A+L
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 240 ADLKL 244
L+L
Sbjct: 255 GSLEL 259
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACS-LIPSFQLGEEVHDF 150
+Y LI + + + A+ +Y + T++ F+ PSVL+AC+ +G +VH
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++K G D + +L+ MYG+ G+L A ++FD M +D+V+WST++ S NG + +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L + K M GV+P + MIS+V AEL L++
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI 220
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 80/141 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S L++S ++N A++++ M E D+ + SV++ C+ + ++ VH +
Sbjct: 170 WSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQIT 229
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ F D +CN+L+ MY + G L + ++F+K+ K+ VSW+ MI SY R ++AL
Sbjct: 230 RKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALR 289
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+M +G++P+ + + S++
Sbjct: 290 SFSEMIKSGIEPNLVTLYSVL 310
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 17/189 (8%)
Query: 61 QQIHGHFIKTCSSCSFQLPILALGYYSSGAA----------------IYSFLITSYIKNN 104
+QIHGH I+T S F L Y SG+ ++ ++ + +N
Sbjct: 425 KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNG 484
Query: 105 CPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCN 164
A+ ++ YM + E++ +V++ACS I S + G+ VH ++ +G D+F
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDT 543
Query: 165 ALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKP 224
ALI MY + G L A +F M + +VSWS+MI +YG +G + A+ M +G KP
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKP 603
Query: 225 SEIAMISIV 233
+E+ ++++
Sbjct: 604 NEVVFMNVL 612
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I+SY + E A++ ++ M ++ E + + SVL +C LI + G+ VH
Sbjct: 268 AVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHG 327
Query: 150 FVVKNGFHGDVFVCN-ALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
F V+ + + AL+ +Y E G L + + +++V+W+++I Y G++
Sbjct: 328 FAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387
Query: 209 EALDLLKDMRVAGVKPSEIAMIS 231
+AL L + M +KP + S
Sbjct: 388 QALGLFRQMVTQRIKPDAFTLAS 410
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y A+ ++ M + D+F + S + AC LG+++H V+
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ D FV N+LI MY + GS+ A +F+++ + VV+W++M+ + +NG EA+
Sbjct: 433 RTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L M + ++ +E+ ++++ + + L+
Sbjct: 492 LFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 89/148 (60%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
Y ++ L+ Y++N A++++ M + + SV+ AC+ + + LG+
Sbjct: 304 YCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGK 363
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG 205
++H +V++ GF ++F+ +AL+ MY + G++ AR++FD+M D VSW+ +I + +G
Sbjct: 364 QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 206 LLDEALDLLKDMRVAGVKPSEIAMISIV 233
EA+ L ++M+ GVKP+++A ++++
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 87/152 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I Y ++ E+A+++ M TD + DSF + SVL S G+E+H +V+
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G DV++ ++L+ MY + + + ++F ++ +D +SW++++ Y +NG +EAL
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L + M A VKP +A S++ A LA L L
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 109/251 (43%), Gaps = 54/251 (21%)
Query: 45 QPLQQKPNVQLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI------------ 92
+ L + P + Q +Q+H FI+T S S + + Y++ +
Sbjct: 9 KTLIKNPTRIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 93 -----YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
+ +I + + A+ + MR + D + PSVLK+C+++ + GE V
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLG------------------------------ 177
H F+V+ G D++ NAL+ MY + +G
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 178 ------YARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMIS 231
R++F+ M KDVVS++T+I Y ++G+ ++AL ++++M +KP + S
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 232 IVHVLAELADL 242
++ + +E D+
Sbjct: 248 VLPIFSEYVDV 258
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 56 NLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIY-------------SFLITSYIK 102
+ Q QQ+H H I T S L + S AI FL S IK
Sbjct: 21 RVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIK 80
Query: 103 NNC----PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHG 158
+ P + V Y M ++ ++ SV+K+C+ + + ++G+ VH V +GF
Sbjct: 81 STSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGL 140
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
D +V AL+ Y + G + ARQ+FD+M K +V+W++++ + +NGL DEA+ + MR
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 219 VAGVKPSEIAMISIVHVLAELADLKL 244
+G +P +S++ A+ + L
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSL 226
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++ + +N + A++++ MR + E DS S+L AC+ + LG VH +++
Sbjct: 176 WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII 235
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G +V + ALI +Y G +G AR++FDKM +V +W+ MI +YG +G +A++
Sbjct: 236 SEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVE 295
Query: 213 LLKDMR-VAGVKPSEIAMISIVHVLA 237
L M G P+ + ++++ A
Sbjct: 296 LFNKMEDDCGPIPNNVTFVAVLSACA 321
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Query: 71 CSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPS 130
C S S+ + G S ++ LI + ++N P ++ + M+ + DSF V S
Sbjct: 443 CGSLSYAQRVFH-GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
+L ACS + S +LG+EVH F+++N D+FV +++ +Y G L + LFD M K
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 191 VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+VSW+T+I Y +NG D AL + + M + G++ I+M+ + + L L+L
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y++N P+ A+ ++ M ++ + V ACSL+PS +LG E H + +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ D F+ +LI MY + GS+ + ++F+ + K SW+ MI YG +GL EA+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L ++M+ G P ++ + ++
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVL 705
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+SY +N + ++ + M TD D F P V+KAC+ + +G VH V
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G DVFV NAL+ YG G + A QLFD M +++VSW++MIR + NG +E+
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 212 DLLKDM 217
LL +M
Sbjct: 274 LLLGEM 279
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 120 DTEVDSFIVPSVLKAC---SLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSL 176
D + D + + + C S +PS + E+H + +K F + V NA + Y + GSL
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLK---ELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 177 GYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVL 236
YA+++F + K V SW+ +I + ++ +LD M+++G+ P + S++
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 237 AELADLKL 244
++L L+L
Sbjct: 507 SKLKSLRL 514
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
D + +VL C+ LG+ VH + VK ++ + NAL+ MY + G + A+ +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG--VKPSEIAMISIVHV 235
K+VVSW+TM+ + G D+L+ M G VK E+ +++ V V
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPV 404
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 131 VLKACSLIPSFQLGEEVHDFVV-KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
+L+A ++G ++H V D +C +I MY GS +R +FD + K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPSEIAMISIVHVLAELADL 242
++ W+ +I SY RN L DE L+ +M + P ++ A ++D+
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 90/151 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y +N A+++ M + + + SVL A S + +G+E+H + +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++GF V + AL+ MY + GSL ARQLFD M+ ++VVSW++MI +Y +N EA+
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ + M GVKP++++++ +H A+L DL+
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y ++ + K + + A++ + MR D E + +LK C ++G+E+H +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK+GF D+F L MY + + AR++FD+M +D+VSW+T++ Y +NG+ AL
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+++K M +KPS I+IV VL ++ L+L
Sbjct: 222 EMVKSMCEENLKPS---FITIVSVLPAVSALRL 251
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 49 QKPNVQLNLDQTQQIHGHFIKTCSSC-SFQLPILALGYYSSGAAI-YSFLITSYIKNNCP 106
K +V+L LD+ + I C G S + ++ +I + +N P
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
+A+ ++ MR + D+F SV+ A + + + +H V+++ +VFV AL
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+ MY + G++ AR +FD M + V +W+ MI YG +G AL+L ++M+ +KP+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 227 IAMISIV 233
+ +S++
Sbjct: 540 VTFLSVI 546
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y++N P+ A+ I+ M + V L AC+ + + G +H V
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G +V V N+LI MY + + A +F K+ + +VSW+ MI + +NG +AL+
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
MR VKP +S++ +AEL+
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELS 452
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
Query: 57 LDQTQQIHGHFIK--TCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYT 114
+++ ++IH F + S +L + ++ +I+ Y+ E+A ++T
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 115 YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGG 174
M D F +VL C+ + S LG+++H V+K DV++C+ L+ MY + G
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Query: 175 SLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVH 234
L +R +F+K + +D V+W+ MI Y +G +EA+ L + M + +KP+ + ISI+
Sbjct: 653 DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 235 VLAELA 240
A +
Sbjct: 713 ACAHMG 718
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ Y++N +++++ M R E D +LK CS + LG ++H VV
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G DV +AL+ MY +G + ++F + K+ VSWS +I +N LL AL
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
K+M+ S+ S++ A L++L+L
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +IT Y + A+ ++ + + D + V +AC+L+ G +++ +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ DV V NA I MYG+ +L A ++FD+M +D VSW+ +I ++ +NG E L
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M + ++P E SI+
Sbjct: 470 LFVSMLRSRIEPDEFTFGSIL 490
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I ++NN A+K + M++ + V I SVL++C+ + +LG ++H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ F D V A + MY + ++ A+ LFD + S++ MI Y + +AL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
L + +G+ EI++ + A
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACA 393
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
V K C+ + +LG++ H ++ +GF FV N L+ +Y A +FDKM +D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 191 VVSWSTMIRSYGRN 204
VVSW+ MI Y ++
Sbjct: 114 VVSWNKMINGYSKS 127
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I ++ +N + ++ M R+ E D F S+LKAC+ S G E+H
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHS 506
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL----------------FDKMVGKDV-- 191
+VK+G + V +LI MY + G + A ++ +KM K +
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 192 --VSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
VSW+++I Y ++A L M G+ P + +++ A LA L
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Query: 84 GYYSSG-AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQ 142
G+ G A +++ +++SY + ++++ M T +S+ + S L AC +
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 143 LGEEVHDFVVKNGFHG-DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
LG+E+H V+K+ H +++VCNALI MY G + A ++ +M DVV+W+++I+ Y
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+N + EAL+ DM AG K E++M SI+ L++L
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL 402
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 42/248 (16%)
Query: 24 QNSNQP-QSPTLKFTHFKAKDTQPLQQKPNVQLN------------------LDQTQQIH 64
+ SNQP Q P+ K F T+ Q+ + N + Q +Q+H
Sbjct: 44 RQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLH 103
Query: 65 GHFIKTCSSCSFQLPILA----LGYYSSG----------------AAIYSFLITSYIKNN 104
KT S F+L LA Y G A ++ +I +Y+ N
Sbjct: 104 SRIFKTFPS--FELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNG 161
Query: 105 CPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCN 164
P +A+ +Y MR + P++LKAC+ + + G E+H +VK G+H F+ N
Sbjct: 162 EPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVN 221
Query: 165 ALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
AL+ MY + L AR+LFD K D V W++++ SY +G E L+L ++M + G
Sbjct: 222 ALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA 281
Query: 224 PSEIAMIS 231
P+ ++S
Sbjct: 282 PNSYTIVS 289
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y +N+C A++++ + + E+D I+ S+L+A S++ S + +E+H ++
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G D + N L+ +YG+ ++GYA ++F+ + GKDVVSW++MI S NG EA++
Sbjct: 515 RKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573
Query: 213 LLKDMRVAGVKPSEIAMISI 232
L + M G+ +A++ I
Sbjct: 574 LFRRMVETGLSADSVALLCI 593
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 78/143 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y++N + A++ ++ M + D + S++ A + + G E+H +V+
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G+ ++ V N LI MY + Y + F +M KD++SW+T+I Y +N EAL+
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 213 LLKDMRVAGVKPSEIAMISIVHV 235
L +D+ ++ E+ + SI+
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRA 496
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 77/143 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+S N AV+++ M T DS + +L A + + + G E+H +++
Sbjct: 555 WTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLL 614
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ GF + + A++ MY G L A+ +FD++ K ++ +++MI +YG +G A++
Sbjct: 615 RKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVE 674
Query: 213 LLKDMRVAGVKPSEIAMISIVHV 235
L MR V P I+ +++++
Sbjct: 675 LFDKMRHENVSPDHISFLALLYA 697
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKN--GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG 188
VL+ C + G ++H + K F D F+ L+ MYG+ GSL A ++FD+M
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 189 KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ +W+TMI +Y NG AL L +MRV GV + +++ A+L D++
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 88 SGAAIYSF--LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
S A +Y + LI SY N C + ++ M D++ P V KAC I S + GE
Sbjct: 88 SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG 205
H + GF +VFV NAL+ MY SL AR++FD+M DVVSW+++I SY + G
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 206 LLDEALDLLKDMRVA-GVKPSEIAMISIVHVLAELA 240
AL++ M G +P I +++++ A L
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD--TEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I Y ++ A+++ + M D T ++F + L AC+ + + ++G+++H +
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 151 VVKNGFHG-DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
++N + +FV N LI MY + GS+ AR +FD M+ K+ V+W++++ YG +G +E
Sbjct: 503 ALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLA 237
AL + +MR G K + ++ +++ +
Sbjct: 563 ALGIFDEMRRIGFKLDGVTLLVVLYACS 590
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 36/186 (19%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I SY K P+ A+++++ M D+ + +VL C+ + + LG+++H F
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTM-------------- 197
V + ++FV N L+ MY + G + A +F M KDVVSW+ M
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 198 ---------------------IRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVL 236
I Y + GL EAL + + M +G+KP+E+ +IS++
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 237 AELADL 242
A + L
Sbjct: 376 ASVGAL 381
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S I+ Y + A+ + M + + + + SVL C+ + + G+E+H + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 153 K-------NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK--DVVSWSTMIRSYGR 203
K NG + V N LI MY + + AR +FD + K DVV+W+ MI Y +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 204 NGLLDEALDLLKDM--RVAGVKPSEIAMISIVHVLAELADLKL 244
+G ++AL+LL +M +P+ + + A LA L++
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y++N+ PE+ +K++ M +S + S L CS + + QLG ++H V
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ DV +LI MY + G LG A +LF+ M KDVV+W+ MI Y ++G D+AL
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L ++M ++P I ++++
Sbjct: 372 LFREMIDNKIRPDWITFVAVL 392
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
+I +++ + A++++ MR +T +S ++ ++ + QL +E+ +
Sbjct: 67 IIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE----- 121
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
D F N ++ Y + A+ FD+M KD SW+TMI Y R G +++A +L
Sbjct: 122 ---PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELF 178
Query: 215 KDMRVAGVKPSEIAMISIVHVLAELADLK 243
M ++ +E++ +++ E DL+
Sbjct: 179 YSM----MEKNEVSWNAMISGYIECGDLE 203
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
I++ LI Y + +A +Y MR + E D+ P ++KA + + +LGE +H
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 146
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V+++GF ++V N+L+ +Y G + A ++FDKM KD+V+W+++I + NG +EA
Sbjct: 147 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 206
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L L +M G+KP ++S++ A++ L L
Sbjct: 207 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + +N PE A+ +YT M + D F + S+L AC+ I + LG+ VH +++
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G ++ N L+ +Y G + A+ LFD+MV K+ VSW+++I NG EA++
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 213 LLKDMR-VAGVKPSEIAMISIVHVLAELADLK 243
L K M G+ P EI + I++ + +K
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVK 341
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 83/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ ++N E A+ + M R + +SF + S L+ CS + F+ G ++H V
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF D + + LI +YG+ G AR +FD + DV+S +TMI SY +NG EALD
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L + M G++P+++ ++S++
Sbjct: 456 LFERMINLGLQPNDVTVLSVL 476
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI IK+ + AV++Y M + D + + SV KA S + + + H V
Sbjct: 133 WNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAV 192
Query: 153 KNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
G +VFV +AL+ MY + G A+ + D++ KDVV + +I Y + G EA+
Sbjct: 193 ILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAV 252
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ M V V+P+E S++ L D+
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
LI Y + AVK + M + + + SVL +C + G+ +H +VK+G
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
F + +L+ MY + + ++F + + VSW+++I +NG + AL +
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 216 DMRVAGVKPSEIAMISIVHVLAELA 240
M +KP+ + S + + LA
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLA 382
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI Y + A+ ++ M + D + P L AC+ + G ++H +
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G+ D+FV N+L+ Y E G L AR++FD+M ++VVSW++MI Y R +A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLAELADLK 243
DL M R V P+ + M+ ++ A+L DL+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%)
Query: 85 YYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLG 144
Y +S + + + ++Y++ A+ ++ M + D + S + +CS + + G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 145 EEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN 204
+ H +V++NGF +CNALI MY + A ++FD+M K VV+W++++ Y N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 205 GLLDEALDLLKDM 217
G +D A + + M
Sbjct: 417 GEVDAAWETFETM 429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I Y + + ++AV ++ M R D EV +S + V+ AC+ + + GE+V+ F
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ +G + + +AL+ MY + ++ A++LFD+ ++ + M +Y R GL EA
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L + M +GV+P I+M+S + ++L ++
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ ++ + E A++++ M+ + D + S+ AC + + L + ++ ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
KNG DV + L+ M+ G A +F+ + +DV +W+ I + G + A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 212 DLLKDMRVAGVKPSEIAMI 230
+L DM G+KP +A +
Sbjct: 557 ELFDDMIEQGLKPDGVAFV 575
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 91/151 (60%), Gaps = 11/151 (7%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-----------DSFIVPSVLKACSLIPSF 141
++ +IT Y+ + E+A+ + M+ + +V +S + ++L +C+ + +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 142 QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
G+E+H + +KN DV V +AL+ MY + G L +R++FD++ K+V++W+ +I +Y
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
G +G EA+DLL+ M V GVKP+E+ IS+
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP---SFQLGEEVHD 149
++ LI+S E A++ + M + E SF + SV+ ACS +P +G++VH
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ ++ G + F+ N L+ MYG+ G L ++ L G+D+V+W+T++ S +N L E
Sbjct: 227 YGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLE 285
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
AL+ L++M + GV+P E + S++ + L L+
Sbjct: 286 ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLR 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQ 142
G + +++ +I Y +N + A+ ++ M + + +S + V+ AC +F
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 143 LGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
E +H FVVK G D FV N L+ MY G + A ++F KM +D+V+W+TMI Y
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 203 RNGLLDEALDLLKDM------------RVAGVKPSEIAMISIVHVLAELADL 242
+ ++AL LL M RV+ +KP+ I +++I+ A L+ L
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSAL 533
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
L+ S +++N AV Y M + D++ P++LKA + + +LG+++H V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 156 FHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
+ D V V N L+ +Y + G G ++FD++ ++ VSW+++I S + AL+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 215 KDMRVAGVKPSEIAMISIVHVLAEL 239
+ M V+PS ++S+V + L
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNL 212
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++S +N A++ M E D F + SVL ACS + + G+E+H + +
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 153 KNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
KNG + FV +AL+ MY + R++FD M + + W+ MI Y +N EAL
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 212 DLLKDM-RVAGVKPSEIAMISIV 233
L M AG+ + M +V
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVV 412
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI Y + A+ ++ M + D + P L AC+ + G ++H +
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G+ D+FV N+L+ Y E G L AR++FD+M ++VVSW++MI Y R +A+
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLAELADLK 243
DL M R V P+ + M+ ++ A+L DL+
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLE 253
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 70/133 (52%)
Query: 85 YYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLG 144
Y +S + + + ++Y++ A+ ++ M + D + S + +CS + + G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 145 EEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN 204
+ H +V++NGF +CNALI MY + A ++FD+M K VV+W++++ Y N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 205 GLLDEALDLLKDM 217
G +D A + + M
Sbjct: 417 GEVDAAWETFETM 429
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I Y + + ++AV ++ M R D EV +S + V+ AC+ + + GE+V+ F
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVR-DEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ +G + + +AL+ MY + ++ A++LFD+ ++ + M +Y R GL EA
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L + M +GV+P I+M+S + ++L ++
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ ++ + E A++++ M+ + D + S+ AC + + L + ++ ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
KNG DV + L+ M+ G A +F+ + +DV +W+ I + G + A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 212 DLLKDMRVAGVKPSEIAMI 230
+L DM G+KP +A +
Sbjct: 557 ELFDDMIEQGLKPDGVAFV 575
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT + + E+AVK ++Y+R ++ +VD + ++L++CS + + QLG+++H
Sbjct: 376 WNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT 435
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEAL 211
K+GF + FV ++LI+MY + G + AR+ F ++ K V+W+ MI Y ++GL +L
Sbjct: 436 KSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSL 495
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
DL M VK + +I+
Sbjct: 496 DLFSQMCNQNVKLDHVTFTAIL 517
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + K+ E+A +++ M+R E D + +L ACS G+ +H V+
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 153 KNGFHGDVFVCNALIMMYGE--GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G NALI MY + G++ A LF+ + KD++SW+++I + + GL ++A
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ +R + +K + A +++ ++LA L+L
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y E+A ++T M+R+ ++VD + +LK + + F LGE+VH V+
Sbjct: 69 WNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
K G+ +V+V ++L+ MY + + A + F ++ + VSW+ +I +
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 141 FQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRS 200
FQ H + +K G D++V N ++ Y + G LGYA LFD+M +D VSW+TMI
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 201 YGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
Y G L++A L M+ +G S++ S +L +A +K
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSG---SDVDGYSFSRLLKGIASVK 115
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 139 PSF-QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWST 196
P F L ++VH V+K G ++ +CNA+I Y + GS+ A+++FD + G KD++SW++
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 197 MIRSYGRNGLLDEALDLLKDMR 218
MI + ++ L + A +L M+
Sbjct: 276 MIAGFSKHELKESAFELFIQMQ 297
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 61 QQIHGHFIKT-CSSCSFQLPILALGYYSSG------------------AAIYSFLITSYI 101
QQ+H H K C + F L L Y G + Y+ LI+ Y
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 102 KNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVF 161
N+ +A ++ M+ T VDS + ++ C++ LG +H VK G +V
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 162 VCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG 221
V N+ I MY + GS+ R+LFD+M K +++W+ +I Y +NGL + L+L + M+ +G
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 222 VKPSEIAMISIVHVLAELADLKL 244
V P ++S++ A L K+
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKI 275
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 77/136 (56%)
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
G ++ +I+ Y +N + +++Y M+ + D F + SVL +C+ + + ++G EV
Sbjct: 221 GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVG 280
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
V NGF +VFV NA I MY G+L AR +FD M K +VSW+ MI YG +G+ +
Sbjct: 281 KLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGE 340
Query: 209 EALDLLKDMRVAGVKP 224
L L DM G++P
Sbjct: 341 IGLMLFDDMIKRGIRP 356
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 108 NAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALI 167
++ +Y M R+ + D+F P +LK+C+ + G+++H V K G + FV ALI
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 168 MMYGEGGSLGYARQLFDK--MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
MY + G + AR++F++ + V ++ +I Y N + +A + + M+ GV
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 226 EIAMISIV 233
+ M+ +V
Sbjct: 156 SVTMLGLV 163
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S L+ Y +N E A++I+ M E D + +VLKAC+ + + +LG+E+H V
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G G+V V +ALI +YG+ G + A +++ KM +++++W+ M+ + +NG +EA+
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
DM G+KP I+ I+I+
Sbjct: 450 FFNDMVKKGIKPDYISFIAIL 470
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 77/126 (61%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +++++ KN+ E A+ ++ M R V D +VL AC + + G+E+H +
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ NG +V V ++L+ MYG+ GS+ ARQ+F+ M K+ VSWS ++ Y +NG ++A+
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 212 DLLKDM 217
++ ++M
Sbjct: 352 EIFREM 357
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
G + A ++ +++ Y+ A++++ M + + F + S +KACS + +L
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G H V+ +GF + F+ + L +YG AR++FD+M DV+ W+ ++ ++ +
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 204 NGLLDEALDLLKDM-RVAGVKPSEIAMISIVHVLAELADLK 243
N L +EAL L M R G+ P +++ L LK
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A++I ++ + S+L+ C+ + SF G + H VVK+G D V N+L+
Sbjct: 45 AIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 169 MYGE-GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
+Y + G + R++FD KD +SW++M+ Y +AL++ +M G+ +E
Sbjct: 105 LYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEF 164
Query: 228 AMISIVHVLAELADLKL 244
+ S V +EL +++L
Sbjct: 165 TLSSAVKACSELGEVRL 181
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 98/167 (58%), Gaps = 11/167 (6%)
Query: 77 QLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACS 136
++P+ +G +++ +I+ Y ++ + A+ + +R +DS V S+L AC+
Sbjct: 210 EMPVRDMGSWNA-------MISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACT 258
Query: 137 LIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWST 196
F G +H + +K+G ++FV N LI +Y E G L +++FD+M +D++SW++
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 197 MIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+I++Y N A+ L ++MR++ ++P + +IS+ +L++L D++
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 83 LGYYSSGAAIYSFL-----------ITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPS 130
LG S A++++L I+ Y +N A+++Y M + + S
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
VL ACS + + G ++H ++KNG + DVFV +L MYG+ G L A LF ++ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 191 VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
V W+T+I +G +G ++A+ L K+M GVKP I ++++
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYT-YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ Y + ++ ++ +M + D PSVLKAC + G ++H
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K GF DV+V +LI +Y ++G AR LFD+M +D+ SW+ MI Y ++G EAL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L +R + ++S++ E D
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDF 263
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 79/153 (51%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y N P A+ ++ MR + + D + S+ S + + V F +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 153 KNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ G F D+ + NA+++MY + G + AR +F+ + DV+SW+T+I Y +NG EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 212 DLLKDMRVAG-VKPSEIAMISIVHVLAELADLK 243
++ M G + ++ +S++ ++ L+
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 84/141 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI + + + E A++++ M R F S+ ACS + G+ VH +++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G F N L+ MY + GS+ AR++FD++ +DVVSW++++ +Y ++G EA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
++MR G++P+EI+ +S++
Sbjct: 350 WFEEMRRVGIRPNEISFLSVL 370
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y +++ P +A+ + M R + F + SV+KA + G ++H F V
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF +V V +AL+ +Y G + A+ +FD + ++ VSW+ +I + R ++AL+
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 213 LLKDMRVAGVKPSEIAMISI 232
L + M G +PS + S+
Sbjct: 249 LFQGMLRDGFRPSHFSYASL 268
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
D ++LK C++ G VH ++++ F D+ + N L+ MY + GSL AR++
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 183 FDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
F+KM +D V+W+T+I Y ++ +AL M G P+E + S++ A
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI ++ N+ + ++ +R+ + F P VLKAC+ S +LG ++H V
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK GF+ DV +L+ +Y G L A +LFD++ + VV+W+ + Y +G EA+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
DL K M GVKP ++ ++ + DL
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L + Y + A+ ++ M + DS+ + VL AC + GE + ++
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ + FV L+ +Y + G + AR +FD MV KD+V+WSTMI+ Y N E ++
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L M +KP + +++ + A L L L
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDL 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I Y N+ P+ ++++ M + + + D F + L +C+ + + LGE +
Sbjct: 281 WSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLID 340
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++ F ++F+ NALI MY + G++ ++F +M KD+V + I +NG + +
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFA 400
Query: 213 LLKDMRVAGVKP 224
+ G+ P
Sbjct: 401 VFGQTEKLGISP 412
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y +N E A+ ++ ++R + ++LKAC+ + LG + H V+
Sbjct: 354 WNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVL 413
Query: 153 KNGF------HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
K+GF D+FV N+LI MY + G + +F KM+ +D VSW+ MI + +NG
Sbjct: 414 KHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGY 473
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIV 233
+EAL+L ++M +G KP I MI ++
Sbjct: 474 GNEALELFREMLESGEKPDHITMIGVL 500
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 92/152 (60%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ + +++ E A+ + M + ++ + SVL ACS + G +VH +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ F DV++ +AL+ MY + G++ A+++FD+M ++VVSW+++I + +NG EALD
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ + M + V+P E+ + S++ A L+ +K+
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKV 271
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 32/184 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LIT + +N A+ ++ M + E D + SV+ AC+ + + ++G+EVH VV
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 153 KNG-FHGDVFVCNALIMMYGEGGSLGYARQLFD--------------------------- 184
KN D+ + NA + MY + + AR +FD
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 185 ----KMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
KM ++VVSW+ +I Y +NG +EAL L ++ V P+ + +I+ A+LA
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 241 DLKL 244
+L L
Sbjct: 401 ELHL 404
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH V+K+GF ++F+ N LI Y + GSL RQ+FDKM +++ +W++++ + G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 207 LDEALDLLKDM 217
LDEA L + M
Sbjct: 102 LDEADSLFRSM 112
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 81/139 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y+KN P AV++Y+ M E D+ + SVL AC + LG+++H ++
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ ++ + NALI MY + G L AR +F+ M +DVVSW+ MI +YG +G +A+
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 213 LLKDMRVAGVKPSEIAMIS 231
L ++ +G+ P IA ++
Sbjct: 397 LFSKLQDSGLVPDSIAFVT 415
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I + +I SY+ N VK++ M + D + P VLKACS + +G ++H
Sbjct: 107 IINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G +FV N L+ MYG+ G L AR + D+M +DVVSW++++ Y +N D+AL
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
++ ++M + M S++
Sbjct: 227 EVCREMESVKISHDAGTMASLL 248
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI------------------YSFLIT 98
L + +QIHGH IKT + L Y+ I ++ ++T
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 99 SYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHG 158
Y +N A++ + +RR + + + PSVL AC+ + + ++G +VH +VK+GF
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
+++V +ALI MY + + AR L + M DVVSW++MI R GL+ EAL + M
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 219 VAGVKPSEIAMISIVHVLA 237
+K + + SI++ A
Sbjct: 321 ERDMKIDDFTIPSILNCFA 339
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPS-FQLGEEVHDFV 151
++ +I ++ A+ ++ M D ++D F +PS+L +L + ++ H +
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G+ V NAL+ MY + G + A ++F+ M+ KDV+SW+ ++ NG DEAL
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L +MRV G+ P +I S++ AEL L+
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEF 448
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+T N + A+K++ MR D + SVL A + + + G++VH +
Sbjct: 398 WTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYI 457
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+GF + V N+L+ MY + GSL A +F+ M +D+++W+ +I Y +NGLL++A
Sbjct: 458 KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQR 517
Query: 213 LLKDMR-VAGVKP 224
MR V G+ P
Sbjct: 518 YFDSMRTVYGITP 530
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y K+ A ++ M+ + + + + SVL+ C+ + GE++H +
Sbjct: 93 WNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEAL 211
K GF DV V N L+ MY + + A LF+ M G K+ V+W++M+ Y +NG +A+
Sbjct: 153 KTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAI 212
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ +D+R G + ++ S++ A ++ ++
Sbjct: 213 ECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
D F N +I+ Y L A +LF K+ +SW+ +I Y ++G EA +L +M+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 219 VAGVKPSEIAMISIVHVLAEL 239
G+KP+E + S++ + L
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSL 138
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + +N PE A+ +YT M + D F + S+L AC+ I + LG+ VH +++
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G ++ N L+ +Y G + A+ LFD+MV K+ VSW+++I NG EA++
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 213 LLKDMR-VAGVKPSEIAMISIVHVLAELADLK 243
L K M G+ P EI + I++ + +K
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 64/103 (62%)
Query: 142 QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
+LGE +H V+++GF ++V N+L+ +Y G + A ++FDKM KD+V+W+++I +
Sbjct: 5 RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGF 64
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
NG +EAL L +M G+KP ++S++ A++ L L
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 107
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ LI+ ++++ A ++T MRR ++ D ++ S++ AC+ + + G +VH V
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ GF VF+ NALI MY + + A+ +F +M +DVVSW+++I ++G ++AL
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELA 240
L DM GVKP+E+ + +++ + +
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVG 353
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
D F+ +++KAC+ + S G +VH + + + D V ++L+ MY + G L A+ +F
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMIS 231
D + K+ +SW+ M+ Y ++G +EAL+L + + V + S A+IS
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY-SWTALIS 210
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRR--TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+S +I Y KN A++ + M R D+ +S + SVL+AC+ + + + G+ +H +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+++ G + V +AL+ MYG G L +++FD+M +DVVSW+++I SYG +G +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
+ + ++M G P+ + +S++
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVL 393
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKAC----SLIPSFQLGEEVHDFVVKNGFHGDVFV 162
E + +Y M R E D F VLKAC + G+E+H + + G+ V++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 163 CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM--RVA 220
L+ MY G + YA +F M ++VVSWS MI Y +NG EAL ++M
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 221 GVKPSEIAMISIVHVLAELADLK 243
P+ + M+S++ A LA L+
Sbjct: 280 DSSPNSVTMVSVLQACASLAALE 302
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 82/152 (53%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ ++ +Y + N+ +I+ M+ + + + PS+LK C + +LGE++H +
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K F + +VC+ LI MY + G L A + + GKDVVSW+TMI Y + D+AL
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ M G++ E+ + + V A L LK
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I+ KN C A++++ M + SVL AC I S ++GE++H V+K G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
F D +VCNAL+ +Y G+L A +F M +D V+++T+I + G ++A++L K
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 216 DMRVAGVKPSEIAMISIV 233
M + G++P + S+V
Sbjct: 379 RMHLDGLEPDSNTLASLV 396
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 84/148 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++ + ++ E A++++ M R + ++F S +KA S + + G++VH +
Sbjct: 660 WNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 719
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G+ + VCNALI MY + GS+ A + F ++ K+ VSW+ +I +Y ++G EALD
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
M + V+P+ + ++ ++ + +
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 131 VLKACSLIP-SFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
VL+AC +F + E++H ++ G VCN LI +Y G + AR++FD + K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
D SW MI +N EA+ L DM V G+ P+ A S++ ++ L++
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 44 TQPLQQKPNVQL-NLDQTQQIHGHFIKT-----CSSCSFQLPILA-LGYYSSGAAI---- 92
T P K ++L +L+ +QIH IKT CS + + A LG + I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 93 -------YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
++ +I Y + N + A+ + M D + + + AC+ + + + G+
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG 205
++H +GF D+ NAL+ +Y G + + F++ D ++W+ ++ + ++G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 206 LLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+EAL + M G+ + S V +E A++K
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A Y+ LI + E A++++ M E DS + S++ ACS + G+++H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ K GF + + AL+ +Y + + A F + ++VV W+ M+ +YG L
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ + + M++ + P++ SI+ L DL+L
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 31/228 (13%)
Query: 38 HFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKT---------------CSSCSFQLPILA 82
H+K +Q + V+LN Q+HG IK+ C++C +
Sbjct: 5 HYKPILSQLENCRSLVELN-----QLHGLMIKSSVIRNVIPLSRLIDFCTTCP---ETMN 56
Query: 83 LGYYSS--------GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKA 134
L Y S I++ +I Y + P+ A+ Y M R D F P VLKA
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKA 116
Query: 135 CSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSW 194
CS + Q G VH FVVK GF +++V L+ MY G + Y ++F+ + +VV+W
Sbjct: 117 CSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAW 176
Query: 195 STMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
++I + N +A++ ++M+ GVK +E M+ ++ D+
Sbjct: 177 GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDI 224
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ LI+ ++ NN +A++ + M+ + + I+ +L AC G+ H F+
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 153 KNGFHG--------DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN 204
GF +V + +LI MY + G L AR LFD M + +VSW+++I Y +N
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 205 GLLDEALDLLKDMRVAGVKPSEIAMISIVH 234
G +EAL + DM G+ P ++ +S++
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y +N E A+ ++ M D SV++A + QLG+ +H +V
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS 344
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF D + AL+ MY + G A++ F+ + KD ++W+ +I +G +EAL
Sbjct: 345 KTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALS 404
Query: 213 LLKDMRVAG-VKPSEIAMISIVHVLAELA 240
+ + M+ G P I + +++ + +
Sbjct: 405 IFQRMQEKGNATPDGITYLGVLYACSHIG 433
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 83/138 (60%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I + +N + ++ + M + ++D+FIVPS+LKA + + G+ +H V+K
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
+ D F+ ++LI MY + G +G AR++F + +D+V ++ MI Y N DEAL+L+K
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 216 DMRVAGVKPSEIAMISIV 233
DM++ G+KP I +++
Sbjct: 208 DMKLLGIKPDVITWNALI 225
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 42 KDTQPLQQKPNVQLNLDQTQQIHG-HFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSY 100
KD + L KP+V + I G ++ S L ++ L Y ++ +I+
Sbjct: 207 KDMKLLGIKPDV---ITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGL 263
Query: 101 IKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV 160
+ N E A + M +S + ++L AC+ + + G+E+H + V G
Sbjct: 264 VHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG 323
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
FV +AL+ MYG+ G + A LF K K V++++MI Y +GL D+A++L M
Sbjct: 324 FVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEAT 383
Query: 221 GVKPSEIAMISIV 233
G K + +I+
Sbjct: 384 GEKLDHLTFTAIL 396
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 55 LNLDQTQQIHGHFIKTCS-----SCSFQLPILALGYYSS--------------GAAIYSF 95
++L Q +Q HGH I+T + S S + AL ++S + ++
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 96 LITSYIKNNCPENAVKIYTYM---RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
LI +Y P+ + I+ ++ + + + P ++KA + + S LG+ +H V
Sbjct: 101 LIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ DVFV N+LI Y G L A ++F + KDVVSW++MI + + G D+AL+
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L K M VK S + M+ ++ A++ +L+
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEF 250
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMR-RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ LI++Y +N P A+ ++ ++ + + +++ + S L AC+ + + +LG +H ++
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K+G + V +ALI MY + G L +R++F+ + +DV WS MI +G +EA+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 212 DLLKDMRVAGVKPSEIAMISI 232
D+ M+ A VKP+ + ++
Sbjct: 452 DMFYKMQEANVKPNGVTFTNV 472
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 71/125 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +++ P+ A++++ M D + + VL AC+ I + + G +V ++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+N + ++ + NA++ MY + GS+ A++LFD M KD V+W+TM+ Y + + A +
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 213 LLKDM 217
+L M
Sbjct: 320 VLNSM 324
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 84/147 (57%)
Query: 94 SFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVK 153
+ ++ +N E A++ + M + E+D+ +V +VL + S LG+++H V+K
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
F G+ FV N LI MY + G L ++ +F +M ++ VSW++MI ++ R+G AL L
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 214 LKDMRVAGVKPSEIAMISIVHVLAELA 240
++M VKP+++ +S++H + +
Sbjct: 446 YEEMTTLEVKPTDVTFLSLLHACSHVG 472
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I+ I+N E+ +++++ MRR +S S L ACS G+++H + K G
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
++ + +AL+ MY + GS+ A +F+ D VS + ++ +NG +EA+
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 216 DMRVAGVK 223
M AGV+
Sbjct: 347 RMLQAGVE 354
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ + + +N C ++ + M + D D + SV+ AC+ I S +LGE+V
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G D V ++LI +Y + G + + R++FD MV D V W++MI Y NG EA+D
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L K M VAG++P++I + ++
Sbjct: 538 LFKKMSVAGIRPTQITFMVVL 558
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 32/184 (17%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I+ YI NN A+ ++ MR +T DS + +V+ AC + + G+++H
Sbjct: 286 LWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 152 VKNGFHGDVFVCNALIMMYGEGGS-------------------------------LGYAR 180
K G D+ V + L+ MY + GS + A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 181 QLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
++F+++ K ++SW++M + +NG E L+ M + E+++ S++ A ++
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 241 DLKL 244
L+L
Sbjct: 465 SLEL 468
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 34/154 (22%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
L+ YI N E A++++ + + D+ + +VLKAC+ + + + G+++H ++ G
Sbjct: 161 LLHGYILNGYAEEALRLF---KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGG 217
Query: 156 FHGDVFVCNALIMMYGEGGSL-----------------------GYA--------RQLFD 184
D + ++L+ +Y + G L GYA R LFD
Sbjct: 218 VECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFD 277
Query: 185 KMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
+ + V+ W++MI Y N + EAL L +MR
Sbjct: 278 RKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
+L++CS L + + ++K GF V V N L+ MY G +G AR LFD+M +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 190 DVVSWSTMIRSYGRNG 205
+ SW+TMI Y +G
Sbjct: 92 NYFSWNTMIEGYMNSG 107
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
D + N ++ + + G L AR+LF+ M KDVV+ ++++ Y NG +EAL L K++
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 219 VAGVKPSEIAMISIVHVLAELADLK 243
+ I + +++ AEL LK
Sbjct: 183 FS---ADAITLTTVLKACAELEALK 204
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 56 NLDQTQQIHGHFIK-------------TCSSCSFQLPILALGYYSS------GAAIYSF- 95
N+D+ +Q+H FIK + C+ ++ Y +S + F
Sbjct: 42 NIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFN 101
Query: 96 -LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
+I Y+ E A+ Y M + E D+F P +LKAC+ + S + G+++H V K
Sbjct: 102 TMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
G DVFV N+LI MYG G + + +F+K+ K SWS+M+ + G+ E L L
Sbjct: 162 GLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLF 221
Query: 215 KDM-RVAGVKPSEIAMISIVHVLAELADLKL 244
+ M +K E M+S + A L L
Sbjct: 222 RGMCSETNLKAEESGMVSALLACANTGALNL 252
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 62/119 (52%)
Query: 119 TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGY 178
T+ + + + S L AC+ + LG +H F+++N ++ V +L+ MY + G L
Sbjct: 228 TNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDK 287
Query: 179 ARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
A +F KM ++ +++S MI +G + AL + M G++P + +S+++ +
Sbjct: 288 ALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
+ A +++ +I + +N+ + A++++ M+R + + SVL+AC+ + +LG +
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQ 281
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
H +VK + D+ + NAL+ MY + GSL A ++F++M +DV++WSTMI +NG
Sbjct: 282 AHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIV 233
EAL L + M+ +G KP+ I ++ ++
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVL 366
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I++Y K + A+++ M R + + + SVL++C+ + ++ +H ++
Sbjct: 130 WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGII 186
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G DVFV +ALI ++ + G A +FD+MV D + W+++I + +N D AL+
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L K M+ AG + + S++ LA L+L
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
DS ++K C + G + + NG +F+ N LI MY + L A QLF
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D+M ++V+SW+TMI +Y + + +AL+LL M V+P+ S++ ++D++
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR 179
Query: 244 L 244
+
Sbjct: 180 M 180
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 89/152 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y + + A++++ M +T+ D + +V+ AC+ S +LG +VH ++
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+GF ++ + NALI +Y + G L A LF+++ KDV+SW+T+I Y L EAL
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L ++M +G P+++ M+SI+ A L + +
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 31/184 (16%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I++ + + ++ P +A+K+Y M +S+ P VLK+C+ +F+ G+++H V
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSL-----------------------GY--------AR 180
+K G D++V +LI MY + G L GY A+
Sbjct: 161 LKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 181 QLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
+LFD++ KDVVSW+ MI Y G EAL+L KDM V+P E M+++V A+
Sbjct: 221 KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Query: 241 DLKL 244
++L
Sbjct: 281 SIEL 284
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y N + A+ ++ M R+ + + S+L AC+ + + +G +H ++
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 153 KN--GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G + +LI MY + G + A Q+F+ ++ K + SW+ MI + +G D +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
DL MR G++P +I + ++
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLL 477
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 84/151 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +N + A++ + M+ ++D + SVL AC + + G+++H ++
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ F ++V +ALI MY + L YA+ +FD+M K+VVSW+ M+ YG+ G +EA+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ DM+ +G+ P + + A ++ L+
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 76/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y + E AVKI+ M+R+ + D + + + AC+ + S + G + H +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+G V V N+L+ +YG+ G + + +LF++M +D VSW+ M+ +Y + G E +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M G+KP + + ++
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVI 479
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 93 YSFLITSYIKNNCPENAVKIY-TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ LI Y + AVK Y T MR + + ++LK S LG+++H V
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV 165
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLF-----------DKMVG------------ 188
+K GF + V + L+ MY G + A+++F + ++G
Sbjct: 166 IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 189 -------KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
KD VSW+ MI+ +NGL EA++ ++M+V G+K + S++
Sbjct: 226 QLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 80/137 (58%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E A+ + M + D+F+VP+V KAC + + G VH +VVK+G VFV ++L
Sbjct: 155 EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSL 214
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
MYG+ G L A ++FD++ ++ V+W+ ++ Y +NG +EA+ L DMR GV+P+
Sbjct: 215 ADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTR 274
Query: 227 IAMISIVHVLAELADLK 243
+ + + + A + ++
Sbjct: 275 VTVSTCLSASANMGGVE 291
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 80/135 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y++ E+A+ + MR + D + +++ A + + +LG+EV + +
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++ F D+ + + ++ MY + GS+ A+++FD V KD++ W+T++ +Y +GL EAL
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 213 LLKDMRVAGVKPSEI 227
L M++ GV P+ I
Sbjct: 463 LFYGMQLEGVPPNVI 477
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 63 IHGHFIKT-CSSCSFQLPILALGYYSSG----------------AAIYSFLITSYIKNNC 105
+HG+ +K+ C F LA Y G A ++ L+ Y++N
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 106 PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNA 165
E A+++++ MR+ E V + L A + + + G++ H + NG D + +
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTS 314
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
L+ Y + G + YA +FD+M KDVV+W+ +I Y + GL+++A+ + + MR+ +K
Sbjct: 315 LLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYD 374
Query: 226 EIAMISIVHVLAELADLKL 244
+ + +++ A +LKL
Sbjct: 375 CVTLATLMSAAARTENLKL 393
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ ++N C E A+ M+ + ++F + L AC+ + S +G +H +++
Sbjct: 514 WTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYII 573
Query: 153 KNGFHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+N H V + +L+ MY + G + A ++F + ++ + MI +Y G L EA+
Sbjct: 574 RNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAI 633
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L + + G+KP I + +++ D+
Sbjct: 634 ALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
+S + Y ++S KN + A+ + T M + + I +L+ C G+
Sbjct: 31 HSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGK 90
Query: 146 EVHDFVVKNG--FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
++H ++KNG + + ++ L++ Y + +L A LF K+ ++V SW+ +I R
Sbjct: 91 QIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCR 150
Query: 204 NGLLDEAL 211
GL + AL
Sbjct: 151 IGLCEGAL 158
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 56 NLDQTQQIHGHFIKTCSSCSFQLPIL-------------ALGYYSS-----GAAIYSFLI 97
+L+ +Q+H H ++T + + AL +SS + +++ +
Sbjct: 24 SLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83
Query: 98 TSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH 157
+++ P + Y +R +D F +LKA S + + G E+H K
Sbjct: 84 RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143
Query: 158 GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
D FV + MY G + YAR +FD+M +DVV+W+TMI Y R GL+DEA L ++M
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 218 RVAGVKPSEIAMISIVHVLAELADLK 243
+ + V P E+ + +IV +++
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMR 229
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 83/142 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I++Y++++ P+ A++++ M + + D + SV+ AC+ + + VH +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIH 371
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
NG ++ + NALI MY + G L R +F+KM ++VVSWS+MI + +G +AL
Sbjct: 372 VNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALS 431
Query: 213 LLKDMRVAGVKPSEIAMISIVH 234
L M+ V+P+E+ + +++
Sbjct: 432 LFARMKQENVEPNEVTFVGVLY 453
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y + + A K++ M+ ++ D I+ +++ AC + + +++F++
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV------------------------- 187
+N D + AL+ MY G + AR+ F KM
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 188 ------GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
KD+V W+TMI +Y + EAL + ++M +G+KP ++M S++ A L
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 242 L 242
L
Sbjct: 360 L 360
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++F+I + + PE ++ +Y M R D P ++K+ S + + +LG +H VV
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 153 KNGFHGDVFVCNALIMMYG-------------------------------EGGSLGYARQ 181
K+G D+F+CN LI MYG + G + AR
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKD-MRVAGVKPSEIAMISIVHVLAELA 240
+FD+M +DVV+WS+MI Y + G ++AL++ MR+ K +E+ M+S++ A L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 241 DL 242
L
Sbjct: 256 AL 257
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIY-TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+S +I Y+K A++I+ MR ++ + + SV+ AC+ + + G+ VH ++
Sbjct: 208 WSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYI 267
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK--DVVSWSTMIRSYGRNGLLDE 209
+ V + +LI MY + GS+G A +F + K D + W+ +I +G + E
Sbjct: 268 LDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRE 327
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
+L L MR + + P EI + ++
Sbjct: 328 SLQLFHKMRESKIDPDEITFLCLL 351
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 83/152 (54%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ LI+ + K A ++ M R + + ++L +CS + S + G+ VH ++
Sbjct: 279 MWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++NG D + I MY G++ AR +FD M ++V+SWS+MI ++G NGL +EAL
Sbjct: 339 IRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEAL 398
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D M+ V P+ + +S++ + ++K
Sbjct: 399 DCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNN--CPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +++ Y K+ C + + +Y MRR VDSF + +KAC + + G +H
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+KNG D +V +L+ MY + G++ A+++FD++ ++ V W +++ Y + E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L MR G+ + +I +V
Sbjct: 195 FRLFCLMRDTGLALDALTLICLV 217
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
+ ++ L+ Y+K + +++ MR T +D+ + ++KAC + + ++G+ VH
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG 234
Query: 150 FVVKNGF--HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
++ F D ++ ++I MY + L AR+LF+ V ++VV W+T+I + +
Sbjct: 235 VSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
EA DL + M + P++ + +I+ + L L+
Sbjct: 294 VEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQL-PILALGYYSSGAAI----------------YSFLITS 99
L+ +QIH H ++ L +L Y G I ++ L++
Sbjct: 265 LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSG 324
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
Y +N + A++++T M + + D + S+L +C+ + + G +VH + +K D
Sbjct: 325 YKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGND 384
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL---LDEALDLLKD 216
+V N+LI MY + L AR++FD DVV ++ MI Y R G L EAL++ +D
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 217 MRVAGVKPSEIAMISIVHVLAELADLKL 244
MR ++PS + +S++ A L L L
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGL 472
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 79/142 (55%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I++ + Y++ + E A+ ++ ++ + D F +++ A + S QLG+E H +
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K G + ++ NAL+ MY + GS A + FD +DVV W+++I SY +G +AL
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+L+ M G++P+ I + ++
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVL 663
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 83/150 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ +K +++++ + + D +I+ +VL ACS++P + G+++H ++
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G D + N LI Y + G + A +LF+ M K+++SW+T++ Y +N L EA++
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L M G+KP A SI+ A L L
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A+ I+ MR S+L+A + + S L +++H + K G + D+F +ALI
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALID 497
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
+Y L +R +FD+M KD+V W++M Y + +EAL+L +++++ +P E
Sbjct: 498 VYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFT 557
Query: 229 MISIVHVLAELADLKL 244
++V LA ++L
Sbjct: 558 FANMVTAAGNLASVQL 573
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH ++ G D ++ N LI +Y G + YAR++F+KM +++VSWSTM+ + +G+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 207 LDEALDL-LKDMRVAGVKPSEIAMISIVHVLAEL 239
+E+L + L+ R P+E + S + + L
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL 159
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPS------FQLGEEVHDFVVKNGFHGDV 160
E+ V + R + +I+ S ++ACS + FQL F+VK+GF DV
Sbjct: 128 ESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQL----QSFLVKSGFDRDV 183
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMI 198
+V LI Y + G++ YAR +FD + K V+W+TMI
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 36 FTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKT-------CSSCSFQLPILALGYYSS 88
HF A TQ + + + ++ ++ GH + T C ++ + SS
Sbjct: 22 LNHFAA--TQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSS 79
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEE 146
+ Y+ +I Y++ +A+ ++ M + D + P V KA + S +LG
Sbjct: 80 LLS-YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH ++++ F D +V NAL+ MY G + AR +FD M +DV+SW+TMI Y RNG
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+++AL + M V ++S++ V L DL++
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 82/146 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y +N +A+ ++ +M ++D + S+L C + ++G VH V
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ + V NAL+ MY + G + AR +FD+M +DV++W+ MI Y +G ++ AL+
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAE 238
L + M+ GV+P+ + + S+V V +
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGD 331
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I ++N +A+ ++ MRR D E + + S+L A + + + +H ++
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLF----DKMVGKDVVSWSTMIRSYGRNGLLD 208
K GF + L+ +Y + G+L A ++F +K KDVV W +I YG +G
Sbjct: 448 KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGH 507
Query: 209 EALDLLKDMRVAGVKPSEIAMIS 231
AL + +M +GV P+EI S
Sbjct: 508 NALQVFMEMVRSGVTPNEITFTS 530
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y ++ ENA+++ M+ ++ + S++ C G+ +H + V
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ + D+ + +LI MY + + ++F WS +I +N L+ +AL
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L K MR V+P+ + S++ A LADL+
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLR 437
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 62 QIHGHFIKTC---------------SSCSFQLPILALGYYSS----GAAIYSFLITSYIK 102
Q+HG IKT S C LP +AL ++S ++ +I+ Y +
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCG--LPEMALKVFTSMSTENMVAWNSMISCYSR 554
Query: 103 NNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFV 162
NN PE ++ ++ M DS + SVL A S S G+ +H + ++ G D +
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 163 CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGV 222
NALI MY + G YA +F KM K +++W+ MI YG +G AL L +M+ AG
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 223 KPSEIAMISIV 233
P ++ +S++
Sbjct: 675 SPDDVTFLSLI 685
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
+ LI+ KN + A+K++ M+ D + DS I+ SV AC+ + + + G +VH
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGS 501
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++K G +VFV ++LI +Y + G A ++F M +++V+W++MI Y RN L + +
Sbjct: 502 MIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELS 561
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+DL M G+ P +++ S++ ++ A L
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 2/155 (1%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I++ ++ +Y +N+ +A+ ++ +MR+ DSF + +V+ CS++ + G+ VH +
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K + +AL+ +Y + G A +F M KD+V+W ++I +NG EAL
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 212 DLLKDMR--VAGVKPSEIAMISIVHVLAELADLKL 244
+ DM+ +KP M S+ + A L L+
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 88 SGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
S +++ +I + + E+++ +Y + ++ S L ACS + G ++
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
H VVK G H D +VC +L+ MY + G +G A +F +V K + W+ M+ +Y N
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
ALDL MR V P + +++ + L
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 126 FIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFD- 184
F PS+LKACS + + G+ +H VV G+ D F+ +L+ MY + G L YA Q+FD
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 185 ------KMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
+ +DV W++MI Y + E + + M V GV+P ++ +V V+ +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 239 LADLK 243
+ +
Sbjct: 181 EGNFR 185
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 82/145 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +IT Y + N P A+ ++ M+ + + + SVL +C+L+ S LG+ +H +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ F V V ALI M+ + GSL A +F+KM KD +WS MI +Y +G ++++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
+ + MR V+P EI + +++ +
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACS 342
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
D++ PS+LKAC++ + + G ++H +K G +V+VC LI MY E + AR +F
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF 187
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D++V VV ++ MI Y R +EAL L ++M+ +KP+EI ++S++ A L L
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 244 L 244
L
Sbjct: 248 L 248
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 1/152 (0%)
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
G +++ +I Y + A+ + YM + D + LKAC+ F+ G +
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
HD + + G DV++ AL+ MY + L ARQ+FDKM KDVV+W+TM+ +NG
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
AL L DMR V +++ +++ +++L
Sbjct: 183 SAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ ++ +Y N E ++++ MR D ++ S L+A + + G +HD+ V
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G GDV V +L+ MY + G L A QLF + +DVVSWS MI SY + G DEA+
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L +DM +KP+ + + S++ A +A +L
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 81/149 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I SY + + A+ ++ M R + ++ + SVL+ C+ + + +LG+ +H + +
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI 428
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K ++ A+I MY + G A + F+++ KD V+++ + + Y + G ++A D
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELAD 241
+ K+M++ GV P M+ ++ A +D
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ L Y + A +Y M+ DS + +L+ C+ + G V+
Sbjct: 467 AVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYG 526
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGLLD 208
++K+GF + V +ALI M+ + +L A LFDK K VSW+ M+ Y +G +
Sbjct: 527 QIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
EA+ + M+V +P+ + ++IV AEL+ L++
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 77/141 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y+ + E AV + M+ + ++ ++++A + + + ++G VH ++
Sbjct: 572 WNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLI 631
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ GF V N+L+ MY + G + + + F ++ K +VSW+TM+ +Y +GL A+
Sbjct: 632 QCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVS 691
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M+ +KP ++ +S++
Sbjct: 692 LFLSMQENELKPDSVSFLSVL 712
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ +N C A+ ++ MR ++D + +++ A S + + +H V+
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI 228
Query: 153 KNGFHGDVFV-CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K GF +F + LI MY L A +F+++ KD SW TM+ +Y NG +E L
Sbjct: 229 KKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVL 285
Query: 212 DLLKDMRVAGVKPSEI 227
+L MR V+ +++
Sbjct: 286 ELFDLMRNYDVRMNKV 301
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ ++T Y+K + PE A+ +Y+ M+R ++ + F V + A + + + G+E+H +
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
V+ G D + ++L+ MYG+ G + AR +FDK+V KDVVSW++MI Y ++ E
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGF 304
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L ++ + +P+E +++ A+L +L
Sbjct: 305 SLFSELVGSCERPNEYTFAGVLNACADLTTEEL 337
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
++++ CS + + G++VH+ + +GF + + N L+ MY + GSL AR++FD+M +
Sbjct: 90 NLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNR 149
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDM 217
D+ SW+ M+ Y GLL+EA L +M
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEM 177
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y K++ +++ + + + + VL AC+ + + +LG++VH ++
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ GF F ++L+ MY + G++ A+ + D D+VSW+++I +NG DEAL
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ +G KP + ++++
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVL 427
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++S +I+ Y + + + MR+ E +S + +++ AC+ VH +
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K GF + + NALI MY + GSL AR++F ++ KD+VSWS+MI +YG +G EAL
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
++ K M G + ++A ++I+
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAIL 461
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKAC-SLIPSFQLGEEVHDFV 151
++ +I+ + N E V ++ M+R + + + SVL AC L L +E+H F
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFS 278
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++G H D + A + MY G++ +R LF+ +DVV WS+MI Y G E +
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+LL MR G++ + + +++IV
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIV 360
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 127 IVPSVLKACSLIPS-FQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK 185
I+PSV+KAC+ F LG ++H +K G D V N+LI MY + R++FD+
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 186 MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKP 224
M+ +D VS+ ++I S ++GLL EA+ L+K+M G P
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIP 146
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y +N+ + + ++ M+ T+ +SF + L + G +VH VV
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
KNG + V N+LI +Y + G++ AR LFDK K VV+W++MI Y NGL EAL
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ MR+ V+ SE + S++ + A L +L+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y L+ + ++ + A +++ + R E+D I SVLK + + G ++H +
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF DV V +L+ Y +G + R++FD+M ++VV+W+T+I Y RN + DE L
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAE 238
L M+ G +P+ + + VLAE
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAE 206
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLI-PSFQLGEEVHDFV 151
+S ++ Y + E A+K++ + + + + F S+L C+ S G++ H F
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K+ + V +AL+ MY + G++ A ++F + KD+VSW++MI Y ++G +AL
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 212 DLLKDMRVAGVKPSEIAMISI 232
D+ K+M+ VK + I +
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGV 602
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLI-PSFQLGEEVHDFV 151
++ +I+ +++N+ E AV +++ M+R + F +L A +I PS EVH V
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS-----EVHAQV 419
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK + V AL+ Y + G + A ++F + KD+V+WS M+ Y + G + A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLA 237
+ ++ G+KP+E SI++V A
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y N A+ ++ MR + SV+K C+ + + E++H VV
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV 322
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM--VGKDVVSWSTMIRSYGRNGLLDEA 210
K GF D + AL++ Y + ++ A +LF ++ VG +VVSW+ MI + +N +EA
Sbjct: 323 KYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEA 381
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVL 236
+DL +M+ GV+P+E I+ L
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTAL 407
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%)
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
+ +N P +++ M + D ++PS K+C+++ +G VH +K G+ D
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
VFV ++L+ MY + G + YAR++FD+M ++VV+WS M+ Y + G +EAL L K+
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 220 AGVKPSEIAMISIVHVLAELADLKL 244
+ ++ + S++ V A L+L
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLEL 235
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 79/143 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S ++ Y + E A+ ++ + V+ + SV+ C+ +LG ++H +
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSI 244
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ F FV ++L+ +Y + G A Q+F+++ K++ W+ M+++Y ++ + ++
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 213 LLKDMRVAGVKPSEIAMISIVHV 235
L K M+++G+KP+ I +++++
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNA 327
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+S +++ + KN P AV+ + M +D D + +++ AC+ + + +LG VH FV
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ GF D+ + N+L+ Y + + A LF + KDV+SWST+I Y +NG EAL
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ DM G +P+ ++ ++ A DL+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+ S + E + +++M R + + D+F +P LKAC + GE +H FV
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 153 KNGFHG-DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K+ G D++V ++LI MY + G + A ++FD++ D+V+WS+M+ + +NG +A+
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 147
Query: 212 DLLKDMRVAG-VKPSEIAMISIVHVLAELADLKL 244
+ + M +A V P + +I++V +L++ +L
Sbjct: 148 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 96 LITSYIKNNCPENAVKIYTYMR-RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
LI+ + N +++ ++ M +T D+ ++ VL +CS + + + H +V+K
Sbjct: 336 LISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKY 395
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
GF + F+ +L+ +Y GSLG A ++F+ + KD V W+++I YG +G +AL+
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETF 455
Query: 215 KDM-RVAGVKPSEIAMISIV 233
M + + VKP+E+ +SI+
Sbjct: 456 NHMVKSSEVKPNEVTFLSIL 475
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I Y++N A+ ++ M TE + V VL+AC+ + G + H+ +
Sbjct: 232 WSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAI 291
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G +V V AL+ MY + S A +F ++ KDVVSW +I + NG+ +++
Sbjct: 292 RKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIE 351
Query: 213 LLKDMRVA-GVKPSEIAMISIVHVLAELADLK 243
M + +P I M+ ++ +EL L+
Sbjct: 352 EFSIMLLENNTRPDAILMVKVLGSCSELGFLE 383
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y +N P+ ++++ M+ T + + D + SVL A S + LGE H FV
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ V VC A++ MY + G + A+++FD+M K V SW+ MI Y NG AL
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
DL M + KP EI M++++
Sbjct: 361 DLFVTMMIEE-KPDEITMLAVI 381
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 96 LITSYIKNNCPENAVKIYTYMRR-TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
+I +Y++ ++ +Y +R+ T D+F ++ K+CSL G ++H + +
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF 107
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
GF D++V ++ MY + G +G AR FD+M + VSW+ +I Y R G LD A L
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 215 KDM 217
M
Sbjct: 168 DQM 170
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ LI+ YI+ + A K++ M D + + ++ +K+ + + +L +E+
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT--- 203
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
H V +I Y + AR+LFD M +++VSW+TMI Y +N E +
Sbjct: 204 -----HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 212 DLLKDMRV-AGVKPSEIAMISIVHVLAELADLKL 244
L ++M+ + P ++ ++S++ +++ L L
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I +Y ++ PE A+ ++ M D + VLKAC+ F+ G ++H +K+G
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
DVFV N L+ +YG G AR++ D+M +D VSW++++ +Y GL+DEA L
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 216 DMRVAGVK 223
+M V+
Sbjct: 231 EMEERNVE 238
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ ++T+Y C ++++ M TE D F + SVL AC+ + S GE VH ++
Sbjct: 271 WNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI 330
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K+G + F+ AL+ MY + G + A ++F +DV +W+++I +GL +AL
Sbjct: 331 DKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDAL 390
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
++ +M G KP+ I I ++
Sbjct: 391 EIFSEMVYEGFKPNGITFIGVL 412
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYM 116
++ +QIHG FIK+ + + + L+ Y ++ E A K+ M
Sbjct: 156 FEEGRQIHGLFIKSG--------------LVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 117 RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSL 176
D + ++ + L+ + + L +E+ + V++ N +I Y G +
Sbjct: 202 PVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVES--------WNFMISGYAAAGLV 253
Query: 177 GYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPSEIAMISIVHV 235
A+++FD M +DVVSW+ M+ +Y G +E L++ M + KP ++S++
Sbjct: 254 KEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSA 313
Query: 236 LAELADL 242
A L L
Sbjct: 314 CASLGSL 320
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%)
Query: 66 HFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDS 125
HF C S + S A +S L+ Y++ + A+ ++ MR+++ V+
Sbjct: 168 HFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNV 227
Query: 126 FIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK 185
+ S L A S + E H +K G D+ + ALI MYG+ G + AR++FD
Sbjct: 228 STLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDC 287
Query: 186 MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+ KDVV+W+ MI Y + GLL+E + LL+ M+ +KP+ + ++
Sbjct: 288 AIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLL 335
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 59 QTQQIHGHFIKT--------CSSCSFQLPILALGYYSS--------GAAIYSFLITSYIK 102
+ +IHG+ +KT S +L + Y SS +++ +I Y
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSI 102
Query: 103 NNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFV 162
++ PE A ++ +R +D F + LK+CS +GE +H +++GF +
Sbjct: 103 SDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL 162
Query: 163 CNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG 221
NALI Y G + AR++FD+M D V++ST++ Y + ALDL + MR +
Sbjct: 163 RNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSE 222
Query: 222 VKPSEIAMISIVHVLAELADL 242
V + ++S + +++L DL
Sbjct: 223 VVVNVSTLLSFLSAISDLGDL 243
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y K E V + M+ + +S +L +C+ + +G V D +
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ D + AL+ MY + G L A ++F++M KDV SW+ MI YG +GL EA+
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 415
Query: 213 LLKDMRVAG--VKPSEIAMISIVH 234
L M V+P+EI + +++
Sbjct: 416 LFNKMEEENCKVRPNEITFLVVLN 439
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ YI N A+ + +M +T +DSF+ +VL A + + + + G EVH V
Sbjct: 587 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 646
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ DV V +AL+ MY + G L YA + F+ M ++ SW++MI Y R+G +EAL
Sbjct: 647 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 706
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
L + M++ G P + ++ V VL+
Sbjct: 707 LFETMKLDGQTPPD--HVTFVGVLS 729
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 21/194 (10%)
Query: 54 QLNLDQTQQIHGHFIKTCSSCSFQLPI--------LALGYYSSGAAIYSFL--------- 96
++ L + +++HGH I T F + I G + ++ F+
Sbjct: 326 EVGLKKGREVHGHVITT-GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWN 384
Query: 97 --ITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
IT +N C AV+ Y MRR D SF + S L +C+ + +LG+++H +K
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL-LDEALDL 213
G +V V NAL+ +Y E G L R++F M D VSW+++I + R+ L EA+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 214 LKDMRVAGVKPSEI 227
+ + AG K + I
Sbjct: 505 FLNAQRAGQKLNRI 518
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
H + KN DV++CN LI Y E G AR++FD+M ++ VSW+ ++ Y RNG
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
EAL L+DM G+ ++ A +S++ E+ + +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGI 120
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVP-SVLKACSLIPSFQL--GEEVHDFV 151
L+ ++ E A K++ M D +S+++ S SL L G EVH V
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHV 339
Query: 152 VKNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ G V + N L+ MY + GS+ AR++F M KD VSW++MI +NG EA
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
++ K MR + P +IS + A L KL
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL--GEEVHDF 150
++ +++ Y +N + A+ M + + + SVL+AC I S + G ++H
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 151 VVKNGFHGDVFVCNALIMMYGEG-GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ K + D V N LI MY + GS+GYA F + K+ VSW+++I Y + G
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRS 189
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
A + M+ G +P+E S+V L +
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTE 221
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 142 QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV-GKDVVSWSTMIRS 200
+LG+++H +KN + NALI YG+ G + ++F +M +D V+W++MI
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 201 YGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
Y N LL +ALDL+ M G + +++ A +A L+
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPS-VLKACSLI-PSFQLGEEVHDF 150
++ +I+ Y + +A +I++ M+ + + S V ACSL P +L E++
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ K+G D+FV + L+ + + GSL YAR++F++M ++ V+ + ++ R +EA
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 211 LDLLKDM 217
L DM
Sbjct: 294 TKLFMDM 300
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y N ++++ M+ + +D F S+L C+ ++G + H ++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K ++FV NAL+ MY + G+L ARQ+F++M +D V+W+T+I SY ++ EA D
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 213 LLKDMRVAGV 222
L K M + G+
Sbjct: 516 LFKRMNLCGI 525
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +++ + +N E A+K Y MR D +VL+ CS++ S + G +H +
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI 758
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEA 210
D N LI MY + G + + Q+FD+M + +VVSW+++I Y +NG ++A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L + MR + + P EI + ++
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVL 841
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 79/152 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ + K C A++ + MR++ + + SVL A ++ + LG VH +
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G +++V ++L+ MY + + A ++F+ + K+ V W+ MIR Y NG + ++
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L DM+ +G + S++ A DL++
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I SY+++ A ++ M D + S LKAC+ + G++VH V
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G D+ ++LI MY + G + AR++F + VVS + +I Y +N L+EA+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVV 615
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L ++M GV PSEI +IV + L L
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
+ F VL C+ + + G ++H ++K G + + AL+ MY + + AR++F
Sbjct: 159 NKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVF 218
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ +V + V W+ + Y + GL +EA+ + + MR G +P +A +++++ L LK
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
LI Y +NN E AV ++ M ++++AC S LG + H + K G
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 156 FHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEALDL 213
F + ++ +L+ MY + A LF ++ K +V W+ M+ + +NG +EAL
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 214 LKDMRVAGVKPSEIAMISIVHVLAELADLK 243
K+MR GV P + ++++ V + L+ L+
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 18/191 (9%)
Query: 54 QLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIY 113
+ N++ +QIH IK L Y GA L+ Y K + +A +++
Sbjct: 173 ETNVEFGRQIHCSMIKMG---------LERNSYCGGA-----LVDMYAKCDRISDARRVF 218
Query: 114 TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEG 173
++ +T + + +KA + + E + D G D +I Y
Sbjct: 219 EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD----EGHRPDHLAFVTVINTYIRL 274
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
G L AR LF +M DVV+W+ MI +G+ G A++ +MR + VK + + S++
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 234 HVLAELADLKL 244
+ +A+L L
Sbjct: 335 SAIGIVANLDL 345
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 82/143 (57%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A ++ +I+ + ++ E A++++ M + E +S + + ACS + + G+E+H
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
VK GF D +V +AL+ MYG+ L AR++F KM K +V+W++MI+ Y G
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
+++L M + G +PS+ + SI+
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSIL 316
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 88 SGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEE 146
S I++ L++ Y KN+ + ++++ + V DSF P+V+KA + LG
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRM 128
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H VVK+G+ DV V ++L+ MY + + Q+FD+M +DV SW+T+I + ++G
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++AL+L M +G +P+ +++ + + L L+
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I+SYI AV++Y M + D SVL ACS + + + G+++H
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ ++ D + +AL+ MY + G+ A ++F+ + KDVVSW+ MI +YG +G E
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPRE 494
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
AL +M+ G+KP + +++++
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVL 518
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y+ ++ V+I M T + S+L ACS + G+ +H +V+
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVI 336
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVV-SWSTMIRSYGRNGLLDEAL 211
++ + D++V +LI +Y + G A +F K KDV SW+ MI SY G +A+
Sbjct: 337 RSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGNWFKAV 395
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++ M GVKP + S++ ++LA L+
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI-----------------YSFLITS 99
L Q++H H IKT + L L +Y + ++ +I+
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
Y + A+ ++ M R+D + + F +VL +C LG+++H +VK +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
+FV ++L+ MY + G + AR++F+ + +DVVS + +I Y + GL +EAL++ +
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 220 AGVKPSEIAMISIVHVLAELADL 242
G+ P+ + S++ L+ LA L
Sbjct: 248 EGMSPNYVTYASLLTALSGLALL 270
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I Y + E A++++ + + S+L A S + G++ H V++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
+ N+LI MY + G+L YAR+LFD M + +SW+ M+ Y ++GL E L+L +
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 216 DMR-VAGVKPSEIAMISIV 233
MR VKP + +++++
Sbjct: 345 LMRDEKRVKPDAVTLLAVL 363
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
++L AC + + G+ VH ++K + ++ L++ YG+ L AR++ D+M K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+VVSW+ MI Y + G EAL + +M + KP+E +++
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVL 160
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 30/242 (12%)
Query: 20 IEKSQNSNQPQSPTLKFTHFKAKDTQP-------LQQKPNVQLNLDQTQQIHGHFIKT-- 70
I S +P+ F F+ D P + L+L+ Q+HG +++
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 71 ---CSSC--------------SFQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIY 113
S C S ++ +G + A + L+ +Y++N+ E A +Y
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG--TKNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 114 TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEG 173
R+ E F++ SVL AC+ + +LG +H VK +FV +AL+ MYG+
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM--RVAGVKPSEIAMIS 231
G + + Q FD+M K++V+ +++I Y G +D AL L ++M R G P+ + +S
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 232 IV 233
++
Sbjct: 419 LL 420
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ I++ + + P A++ + RR D +S + L ACS LG ++H V+
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++GF DV VCN LI YG+ + + +F +M K+ VSW +++ +Y +N ++A
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASV 296
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L R V+ S+ + S++ A +A L+L
Sbjct: 297 LYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ +N A+ + MRR + F P KA + + G+++H V
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G DVFV + MY + AR+LFD++ +++ +W+ I + +G EA++
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ R P+ I + ++ ++ L L
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 227
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A +++ +I + AV+ Y+ M + D+F P V+K+ + I S + G+++H
Sbjct: 95 AFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHA 154
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
V+K GF DV+VCN+LI +Y + G A ++F++M +D+VSW++MI Y G
Sbjct: 155 MVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFS 214
Query: 210 ALDLLKDMRVAGVKPSEIAMIS 231
+L L K+M G KP + +S
Sbjct: 215 SLMLFKEMLKCGFKPDRFSTMS 236
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y+ +++ ++ M + + D F S L ACS + S ++G+E+H V
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAV 258
Query: 153 KNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ GDV V +++ MY + G + YA ++F+ M+ +++V+W+ MI Y RNG + +A
Sbjct: 259 RSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAF 318
Query: 212 DLLKDM-RVAGVKPSEIAMISIV 233
+ M G++P I I+++
Sbjct: 319 LCFQKMSEQNGLQPDVITSINLL 341
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 80/141 (56%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y++N +A++++ + + DS + S+L A + S G E+H ++V
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ + + + N+L+ MY G L AR+ F+ ++ KDVVSW+++I +Y +G ++
Sbjct: 459 KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L +M + V P++ S++
Sbjct: 519 LFSEMIASRVNPNKSTFASLL 539
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL--GEEVHDF 150
++ +I Y +N +A + M + + P V+ + +L+P+ + G +H +
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNG-----LQPDVITSINLLPASAILEGRTIHGY 355
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++ GF + + ALI MYGE G L A +FD+M K+V+SW+++I +Y +NG A
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSA 415
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAE 238
L+L +++ + + P + SI+ AE
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAE 443
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 76/132 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I +Y + N K++ M + D F+ P +L+ C+ + G+ +H V+
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G + V N+++ +Y + G L +A + F +M +DV++W++++ +Y +NG +EA++
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVE 268
Query: 213 LLKDMRVAGVKP 224
L+K+M G+ P
Sbjct: 269 LVKEMEKEGISP 280
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ I N A+ ++ M ++ + S + ACS + G EVH V
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF DV V N+L+ MY + G L AR++FD + KDV +W++MI Y + G +A +
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M+ A ++P+ I +++
Sbjct: 440 LFTRMQDANLRPNIITWNTMI 460
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
G A ++ +I YI+N + A++++ M+ + +S + S+L AC+ + ++
Sbjct: 483 GKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
E+H V++ V NAL Y + G + Y+R +F M KD+++W+++I Y
Sbjct: 543 VREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVL 602
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+G AL L M+ G+ P+ + SI+
Sbjct: 603 HGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGF--HGDVFVCNALIMMYGEGGSLGYARQLFDKMVG 188
+L++C S LG +H + G DVFV L+ MY + G + AR++FD M
Sbjct: 87 LLESCIDSGSIHLGRILH---ARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 189 KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+++ +WS MI +Y R E L + M GV P + I+ A D++
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE 198
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
L+ Y K E+A K++ ++ D + ++ +A +++L + D
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD----AN 448
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKM-----VGKDVVSWSTMIRSYGRNGLLDEA 210
++ N +I Y + G G A LF +M V ++ +W+ +I Y +NG DEA
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L+L + M+ + P+ + ++S++ A L K+
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKM 542
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 80 ILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP 139
++ LG SS + + ++ Y K + A K + MR E D SVL A
Sbjct: 207 VIKLGM-SSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNG 261
Query: 140 SFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWS 195
+ E+ + K G + N LI Y + G A L KM + DV +W+
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 196 TMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
MI NG+ +ALD+ + M +AGV P+ + ++S V
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Query: 92 IYSFLITSYIKN-NCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+Y+ ++ + ++ + +V +Y M+R + SV+ ACS++ S ++G++VH
Sbjct: 239 VYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++K+G + + + ++L+ MY + G + AR++FD+M K+V SW++MI YG+NG +EA
Sbjct: 299 IMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEA 358
Query: 211 LDLLKDMRVAGVKPSEIAMI 230
L+L M+ ++P+ + +
Sbjct: 359 LELFTRMKEFRIEPNYVTFL 378
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 54/85 (63%)
Query: 139 PSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMI 198
P+ + G+++H ++K GF D+ + L++++ + G L YARQ+FD++ + +++ MI
Sbjct: 48 PAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMI 107
Query: 199 RSYGRNGLLDEALDLLKDMRVAGVK 223
Y ++GL+ E L L++ M +G K
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEK 132
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKAC-----SLIPSFQLGEEV 147
Y+++I+ Y+K+ + + + M + + D + + VLKA ++I L V
Sbjct: 103 YNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLV 162
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
H ++K D + AL+ Y + G L AR +F+ M ++VV ++MI Y G +
Sbjct: 163 HARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFV 222
Query: 208 DEALDLLKDMRVAGV 222
++A ++ +V +
Sbjct: 223 EDAEEIFNTTKVKDI 237
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 83/152 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ I + N P ++ ++ M+R E ++F P V KAC+ + E VH ++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ F DVFV A + M+ + S+ YA ++F++M +D +W+ M+ + ++G D+A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L ++MR+ + P + +++++ + LKL
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKL 171
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 53 VQLNLDQTQQIHGHFI----KTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPEN 108
+ L DQ + FI K+ +CS +L + S ++ +I+ Y + +
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT--SRTCVSWTVMISGYAEKGDMDE 340
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD-VFVCNALI 167
A+ ++ M ++ + D + S++ C S + G+ + G D V +CNALI
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALI 400
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
MY + GS+ AR +FD K VV+W+TMI Y NG+ EAL L M KP+ I
Sbjct: 401 DMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHI 460
Query: 228 AMISIVHVLAELADLK 243
++++ A L+
Sbjct: 461 TFLAVLQACAHSGSLE 476
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 108 NAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALI 167
+A +Y M R + + D ++ +C + G +H + G D+ N I
Sbjct: 239 DAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFI 298
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
MY + AR LFD M + VSW+ MI Y G +DEAL L M +G KP +
Sbjct: 299 SMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 228 AMISIVHVLAELADLK 243
++S++ + L+
Sbjct: 359 TLLSLISGCGKFGSLE 374
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 77/141 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S LI +K+ A ++ + + + D FIV ++LK CS + S G+++H +
Sbjct: 411 FSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCI 470
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G+ + AL+ MY + G + LFD M+ +DVVSW+ +I +G+NG ++EA
Sbjct: 471 KKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFR 530
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
M G++P+++ + ++
Sbjct: 531 YFHKMINIGIEPNKVTFLGLL 551
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +++ Y + P A+++Y M ++ E + F+ +VLKAC L+ QLG V++ +
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K GDV + N+++ MY + G L A F +++ SW+T+I Y + GL+DEA+
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 212 DLLKDM 217
L M
Sbjct: 194 TLFHRM 199
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 85/156 (54%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
+S A+++ +++ ++ N E A+ + + ++D DS+ + LK C + +LG +
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH VV +G+ D V + L+ ++ G++ A +LF ++ KD++++S +IR ++G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
A L +++ G+ + + +I+ V + LA L
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASL 459
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ ++ P A++ M+R +D F +P LKACS +G+++H VV
Sbjct: 207 WNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVV 265
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK---MVGKDVVSWSTMIRSYGRNGLLDE 209
K+G F +ALI MY GSL YA +F + V V W++M+ + N +
Sbjct: 266 KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEA 325
Query: 210 ALDLL 214
AL LL
Sbjct: 326 ALWLL 330
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 58/95 (61%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
+D ++ + L+ C + +F+ GE + V+K G +VF+ N +I MY + L A ++
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 183 FDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
FD+M +++V+W+TM+ Y +G ++A++L + M
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I+ + N A+ ++ M +T + +VL +CS + S G + H
Sbjct: 484 ACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG 543
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
VVK+G+ D FV AL MY + G + ARQ FD ++ K+ V W+ MI YG NG DE
Sbjct: 544 LVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDE 603
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
A+ L + M +G KP I +S++
Sbjct: 604 AVGLYRKMISSGEKPDGITFVSVL 627
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVL------KAC---SLIPSFQL 143
Y+ +I + N AV+++ M +VDS + ++L + C S I +L
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G+++H ++ GF GD+ + N+L+ +Y + + A +F +M +VVSW+ MI +G+
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D++++ L MR +G +P+E+ IS++ D++
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 31/129 (24%)
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----------------- 186
G+ +H F+V+ G D ++CN L+ +Y E G YAR++FD+M
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 187 VG--------------KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
VG +DVVSW+ MI R G ++AL + K M G PS + S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 233 VHVLAELAD 241
+ +++ D
Sbjct: 145 LSACSKVLD 153
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ ++ E A+ +Y M F + SVL ACS + G H V
Sbjct: 106 WNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAV 165
Query: 153 KNGFHGDVFVCNALIMMYGEGGSL-GYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G ++FV NAL+ MY + G + Y ++F+ + + VS++ +I R + EA+
Sbjct: 166 KTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAV 225
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLA 237
+ + M GV+ + + +I+ + A
Sbjct: 226 QMFRLMCEKGVQVDSVCLSNILSISA 251
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ Y E A+ + M+ + + D + +L +C+ + + G+++H V+
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEAL 211
+ + + + LI +Y E + + +FD + + D+ W++MI + N L +AL
Sbjct: 444 RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKAL 503
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLAELADL 242
L + M + A + P+E + +++ + L L
Sbjct: 504 ILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y K E A+ +Y M + D + ++ +CS++ G+E +++V
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD---- 208
+NG + + NAL+ M+ + G + AR++FD + + +VSW+TMI Y R GLLD
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 209 ---------------------------EALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
+AL L ++M+ + KP EI MI + ++L
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 242 L 242
L
Sbjct: 405 L 405
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRR---TDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
++ I + ++ P+ + +Y M R ++ D F P + K C+ + LG +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
V+K V NA I M+ G + AR++FD+ +D+VSW+ +I Y + G ++
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
A+ + K M GVKP ++ MI +V + L DL
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDL 273
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 73/142 (51%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I ++ ++A+ ++ M+ ++T+ D + L ACS + + +G +H ++
Sbjct: 356 LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K +V + +L+ MY + G++ A +F + ++ ++++ +I +G A+
Sbjct: 416 EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAI 475
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+M AG+ P EI I ++
Sbjct: 476 SYFNEMIDAGIAPDEITFIGLL 497
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ I + +++ E ++++ +M +++ D + S+L CS + LG +H +
Sbjct: 513 WNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLIT 572
Query: 153 KNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K F D FVCN LI MYG+ GS+ ++F++ K++++W+ +I G +G EAL
Sbjct: 573 KTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL 632
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+ K+ G KP ++ ISI+
Sbjct: 633 EKFKETLSLGFKPDRVSFISIL 654
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + K+ P A+K++ M + SVL SL+ G ++H ++
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG-RNGLLDEAL 211
KNG + + NALI Y + G+L +R FD + K++V W+ ++ Y ++G + L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CL 401
Query: 212 DLLKDMRVAGVKPSE 226
L M G +P+E
Sbjct: 402 SLFLQMLQMGFRPTE 416
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 128 VPSVLKACSLIPSFQLGEEVHDFVVK--NGFHGDVFVCNALIMMYGEGGSLGYARQLFDK 185
V S+L C PSF + +H + + V+VCN +I +Y + G + A ++FD+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 186 MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
M ++ VS++T+I+ Y + G +D+A + +MR G P++
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQ 115
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y K + A +++ MR + V +L SL + G ++H +
Sbjct: 83 FNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSL 140
Query: 153 KNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G F D FV L+ +YG L A Q+F+ M K + +W+ M+ G G L E +
Sbjct: 141 KYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECM 200
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+++ G +E + + ++ ++ + DL +
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDI 233
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
VLK S + + +++H K G ++ V N+LI YG+ G+ A ++F D
Sbjct: 221 VLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 191 VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHV 235
+VSW+ +I + ++ +AL L M G P++ +S++ V
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I ++N A++++ M+ + + F VL ACS + + +LG VH FV
Sbjct: 223 WTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVE 282
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
FV NALI MY G + AR++F M KDV+S++TMI +G EA++
Sbjct: 283 NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAIN 342
Query: 213 LLKDMRVAGVKPSEIAMISIVH 234
+DM G +P+++ ++++++
Sbjct: 343 EFRDMVNRGFRPNQVTLVALLN 364
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 29 PQSPTLKFTHFKA-----KDTQPLQQKPNVQLNL-----DQTQQIHGHFIKTCSSC-SFQ 77
P S TL+ + K + + + P++ + DQ + I+ CS+ S
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD 78
Query: 78 LPILALGYYSS-GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACS 136
Y S+ +Y+ +I ++ + + V +Y M D++++ SVLKAC
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD 138
Query: 137 LIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWST 196
L ++ E+H V+K GF V ++ +YG+ G L A+++FD+M +D V+ +
Sbjct: 139 L----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 197 MIRSYGRNGLLDEALDLLKDMRV 219
MI Y G + EAL+L +D+++
Sbjct: 195 MINCYSECGFIKEALELFQDVKI 217
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 84/141 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ +++ E AV+++ M+ + + + +L+ CS F G ++H +V+
Sbjct: 57 WNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVL 116
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G +V +CN+LI+MY G L +R++F+ M +++ SW++++ SY + G +D+A+
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
LL +M + G+KP + S++
Sbjct: 177 LLDEMEICGLKPDIVTWNSLL 197
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++ Y ++A+ + M+ + + + S+L+A + +LG+ +H +++
Sbjct: 193 WNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYIL 252
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+N DV+V LI MY + G L YAR +FD M K++V+W++++ LL +A
Sbjct: 253 RNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEA 312
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
L+ M G+KP I S+ A L
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYATLG 340
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 102 KNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVF 161
KN NA+K++ M+ ++ + ++LK + G+EVH F ++ D +
Sbjct: 373 KNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAY 432
Query: 162 VCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG 221
V AL+ MYG+ G L A ++F + K + SW+ M+ Y G +E + M AG
Sbjct: 433 VATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG 492
Query: 222 VKPSEIAMISIVHV 235
++P I S++ V
Sbjct: 493 MEPDAITFTSVLSV 506
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 143 LGEEVHDFVVKNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
LG +H ++K G + D V +A + YG SLG+A +LFD+M +D ++W+ ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHV 235
R+G ++A++L ++M+ +G K + M+ ++ V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Query: 92 IYSF--LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
IYSF LI + K ++ +++ M DS ++P++ K C+ + +F++G+++H
Sbjct: 81 IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC 140
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+G D FV ++ MY G +G AR++FD+M KDVV+ S ++ +Y R G L+E
Sbjct: 141 VSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEE 200
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
+ +L +M +G++ + ++ I+
Sbjct: 201 VVRILSEMESSGIEANIVSWNGIL 224
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +N A++++ M+ + + +PS+L AC I + G H F V
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ +V V +ALI MY + G + ++ +F+ M K++V W++++ + +G E +
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
+ + + +KP I+ S++ ++
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVG 503
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 35/185 (18%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ + ++ + AV ++ + D V SVL + +G +H +V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 153 KNGFHGDVFVCNALIMMYGEGGSL-----------------------GYAR--------- 180
K G D V +A+I MYG+ G + G +R
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 181 --QLF-DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
+LF ++ + +VVSW+++I +NG EAL+L ++M+VAGVKP+ + + S++
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 238 ELADL 242
+A L
Sbjct: 400 NIAAL 404
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y + E A++++ R + ++D F L C LGE +H VV
Sbjct: 116 FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVV 175
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
NG VF+ N LI MY + G L A LFD+ +D VSW+++I Y R G +E L+
Sbjct: 176 VNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLN 235
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
LL M G+ + A+ S++
Sbjct: 236 LLAKMHRDGLNLTTYALGSVL 256
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A I FL I + A K++ M+R E VLKACS + + G ++H
Sbjct: 323 AMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHA 382
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ KN F D F+ +ALI +Y GS Q F +D+ SW++MI + +N L+
Sbjct: 383 LICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLES 442
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
A DL + + + ++P E + ++ A+ A L
Sbjct: 443 AFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 79/143 (55%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A ++ +I +++N E+A ++ + + + + V ++ AC+ + GE++ +
Sbjct: 425 ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGY 484
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+K+G V + I MY + G++ A Q+F ++ DV ++S MI S ++G +EA
Sbjct: 485 AIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEA 544
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L++ + M+ G+KP++ A + ++
Sbjct: 545 LNIFESMKTHGIKPNQQAFLGVL 567
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKAC--SLIPSF-QLGEEVHD 149
++ LI+ Y++ E + + M R + ++ + SVLKAC +L F + G +H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR-NGLLD 208
+ K G D+ V AL+ MY + GSL A +LF M K+VV+++ MI + + + + D
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 209 ----EALDLLKDMRVAGVKPS 225
EA L DM+ G++PS
Sbjct: 337 EASSEAFKLFMDMQRRGLEPS 357
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 68/125 (54%)
Query: 120 DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYA 179
+T +DS + + + S LG+ H ++K+ + +++ N L+ MY + LG+A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 180 RQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
RQLFD+M ++++S++++I Y + G ++A++L + R A +K + + E
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 240 ADLKL 244
DL L
Sbjct: 162 CDLDL 166
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 31/184 (16%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ LI + P A YT M ++ D+ P ++KA S + +GE+ H +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSW----------------- 194
V+ GF DV+V N+L+ MY G + A ++F +M +DVVSW
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 195 --------------STMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
S MI Y +N ++A+DL + M+ GV +E M+S++ A L
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 241 DLKL 244
L+
Sbjct: 264 ALEF 267
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 76/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I Y KNNC E A+ ++ +M+R + ++ SV+ +C+ + + + GE +++VV
Sbjct: 217 WSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ ++ + AL+ M+ G + A +F+ + D +SWS++I+ +G +A+
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMH 336
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
M G P ++ +++
Sbjct: 337 YFSQMISLGFIPRDVTFTAVL 357
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 83/141 (58%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y++ +K++T MR ++ D +VLKA + S LG+++H F++
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++G +VF + L+ MY + GS+ A Q+F++M ++ VSW+ +I ++ NG + A+
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
M +G++P ++++ ++
Sbjct: 540 AFAKMIESGLQPDSVSILGVL 560
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LIT Y K+ ++ ++ MR++ + F VLKA + F LG+++H V
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF D V N ++ Y + + R LFD+M D VS++ +I SY + + +L
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
++M+ G +++ + A L+ L++
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD--TEVDSFIVPSVLKACS-LIPSFQLGEEVHD 149
++ L+ Y +N+ + A K++ M R+ T D ++L C+ +P +G+ VH
Sbjct: 113 WTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ-VHA 171
Query: 150 FVVKNGFHGDVF--VCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
F VK GF + F V N L+ Y E L A LF+++ KD V+++T+I Y ++GL
Sbjct: 172 FAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLY 231
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
E++ L MR +G +PS+ ++ + L D L
Sbjct: 232 TESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I+SY + + E ++ + M+ + +F ++L + + S Q+G ++H +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ V N+L+ MY + A +F + + VSW+ +I Y + GL L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L MR + ++ + +++ A A L L
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLL 470
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI-----------------YSFLITS 99
D + +HG +KTC ++ + L Y+ + +SF+I
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
+ +N AV ++ MR + F + S+L C++ LGE++H VVK GF D
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
++V NALI +Y + + A +LF ++ K+ VSW+T+I Y G +A + ++
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 220 AGVKPSEIAMISIVHVLAELADLKL 244
V +E+ S + A LA + L
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDL 467
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Query: 36 FTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKTCSSCSF--QLPILALGYYSSGAAIY 93
F + P P V+L D + I S C + G ++
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 94 SFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVK 153
+ +++ Y++N E+++K+ + MR +++ + LKA + +F + VH ++K
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
+ D V L+ +Y + G + A ++F++M DVV WS MI + +NG +EA+DL
Sbjct: 276 TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 214 LKDMRVAGVKPSEIAMISIVHVLA 237
MR A V P+E + SI++ A
Sbjct: 336 FIRMREAFVVPNEFTLSSILNGCA 359
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A ++ R V S L AC+ + S LG +VH +K V V N+LI
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
MY + G + +A+ +F++M DV SW+ +I Y +GL +AL +L M+ KP+ +
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 229 MISIV 233
+ ++
Sbjct: 553 FLGVL 557
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
++ + +Y+ + R E++ + S LK + ++ +H +VK G+ + FV AL
Sbjct: 128 QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL 187
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
I Y GS+ AR +F+ ++ KD+V W+ ++ Y NG +++L LL MR+AG P+
Sbjct: 188 INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ + +N E A K+ + + + V +F S+L + + S + GE++H VV
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G + VCNALI MY + GS+ A ++F+ M ++V+SW++MI + ++G L+
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
M GVKP+E+ ++I+
Sbjct: 562 TFNQMIEEGVKPNEVTYVAIL 582
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT ++ P A++ + M + E D F + SV AC+ + + LG+++H + +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 153 KNGFHGDVFVCNALIMMYGE---GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN-GLLD 208
++G DV +L+ MY + GS+ R++FD+M V+SW+ +I Y +N L
Sbjct: 297 RSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 209 EALDLLKDMRVAG-VKPSEIAMISIVHVLAELADLKL 244
EA++L +M G V+P+ S L+D ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 77 QLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTE-VDSFIVPSVLKAC 135
+LPI + S+ + LI ++ AV M R +DS S+LK+C
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 136 SLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM--VGK-DVV 192
F+LG+ VH +++ D + N+LI +Y + G A +F+ M GK DVV
Sbjct: 73 IRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVV 132
Query: 193 SWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
SWS M+ YG NG +A+ + + G+ P++ +++ +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S ++ Y N +A+K++ + + +V++ACS +G F++
Sbjct: 134 WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLM 193
Query: 153 KNG-FHGDVFVCNALIMMYGEG-GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G F DV V +LI M+ +G S A ++FDKM +VV+W+ MI + G EA
Sbjct: 194 KTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREA 253
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ DM ++G + + + S+ AEL +L L
Sbjct: 254 IRFFLDMVLSGFESDKFTLSSVFSACAELENLSL 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKN-NCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ LIT Y+KN N A+ +++ M + E + F S KAC + ++G++V
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K G + V N++I M+ + + A++ F+ + K++VS++T + RN ++A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
LL ++ + S S++ +A + ++
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIR 491
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT +++ P A+ I+ M + D + + L AC+ +PS G+ +H F++
Sbjct: 510 WNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+ DV+ + LI MY + G+L A +F M K++VSW+++I + G +G L ++L
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 213 LLKDM-RVAGVKPSEIAMISIVHVLAELADL 242
L +M +G++P +I + I+ + D+
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 77/136 (56%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
S +++ +I+ Y+ N ++++++ ++ + + + S+L ++ + +LG E
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H F++K GF + A+I MY + G + A ++F+++ +D+VSW++MI ++
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 207 LDEALDLLKDMRVAGV 222
A+D+ + M V+G+
Sbjct: 523 PSAAIDIFRQMGVSGI 538
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
I++ ++ Y K ++ +K ++ MR ++ VL C+ LG ++H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
VV +G + + N+L+ MY + G A +LF M D V+W+ MI Y ++GL++E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+L +M +GV P I S++ +++ +L+
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+S+++N A+ Y M D P ++KAC + +F+ + + D V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G + FV ++LI Y E G + +LFD+++ KD V W+ M+ Y + G LD +
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
MR+ + P+ + ++ V A
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCA 250
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 83/152 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y+++ E ++ + M + D+ S+L + S + + +++H +++
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++ D+F+ +ALI Y + + A+ +F + DVV ++ MI Y NGL ++L+
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ + + + P+EI ++SI+ V+ L LKL
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK- 189
+L+ACS + G++VH F++ N GD + ++ MY GS ++F ++ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 190 -DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ W+++I S+ RNGLL++AL M GV P +V L + K
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A + +I +Y + A+ ++ M++ + S+L C+ + S Q G +VH
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+V+ F DV+V + L+ MY + G L A+ +FD+ KD++ W+++I Y +GL +EA
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L + +M +G P+++ +I+I+
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAIL 439
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 8/151 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y +NN + A K++ M TEV S+L +L + EE + +
Sbjct: 206 WTTMITGYRQNNRVDVARKLFEVMPEK-TEVSW---TSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
V CNA+I+ +GE G + AR++FD M +D +W MI++Y R G EALD
Sbjct: 262 MK----PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L M+ GV+PS ++ISI+ V A LA L+
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 84/141 (59%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y N ++AV+++ M++ D + + SVL A S + S +LGE +H +
Sbjct: 242 WNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAE 301
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+G D + +ALI MY + G + A +F+++ ++V++WS MI + +G +A+D
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
MR AGV+PS++A I+++
Sbjct: 362 CFCKMRQAGVRPSDVAYINLL 382
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 45/177 (25%)
Query: 113 YTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGE 172
Y M E + F PSVLKAC+ Q G+++H +K GF GD FV + L+ MY
Sbjct: 116 YEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM 175
Query: 173 GGSL-------------------------------------GY--------ARQLFDKMV 187
G + GY AR LFDKM
Sbjct: 176 CGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMR 235
Query: 188 GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ VVSW+TMI Y NG +A+++ ++M+ ++P+ + ++S++ ++ L L+L
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLEL 292
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 81/141 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ +I+ +N E +K+++ M+R E + +K+C+++ ++ G++ H ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF + NALI MY + G + ARQ+F M D VSW+ +I + G++G EA+D
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ ++M G++P I +++++
Sbjct: 505 VYEEMLKKGIRPDRITLLTVL 525
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I+ Y+ + A+++ M + E+D F PSV++AC+ QLG++VH +V+
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 153 KN---GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ FH D N+L+ +Y + G AR +F+KM KD+VSW+ ++ Y +G + E
Sbjct: 314 RREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 210 ALDLLKDMR 218
A + K+M+
Sbjct: 370 AKLIFKEMK 378
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLG-EEVHDF 150
+Y+ +IT + NN +A+ ++ M+ + D+F SVL +L+ + + H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGS----LGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+K+G V NAL+ +Y + S L AR++FD+++ KD SW+TM+ Y +NG
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 207 LDEALDLLKDM 217
D +LL+ M
Sbjct: 235 FDLGEELLEGM 245
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 140 SFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIR 199
S QL VH ++ GF + N LI +Y + L YARQLFD++ D ++ +TM+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 200 SYGRNG 205
Y +G
Sbjct: 89 GYCASG 94
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 80/156 (51%)
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
G ++Y+ +I Y + P+ +++Y M + DS +KAC + GE V
Sbjct: 80 GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW 139
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
V G+ DVFVC++++ +Y + G + A LF KM +DV+ W+TM+ + + G
Sbjct: 140 CKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSL 199
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+A++ ++M+ G + M+ ++ +L D K+
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 81/151 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++T + + AV+ Y M+ D ++ +L+A + ++G VH ++
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G +V V +L+ MY + G + A ++F +M+ K VSW ++I + +NGL ++A +
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFE 304
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ +M+ G +P + ++ ++ +++ LK
Sbjct: 305 AVVEMQSLGFQPDLVTLVGVLVACSQVGSLK 335
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 1/148 (0%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A + LI+ + +N A + M+ + D + VL ACS + S + G VH
Sbjct: 283 AVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+++K D AL+ MY + G+L +R++F+ + KD+V W+TMI YG +G E
Sbjct: 343 YILKRHVL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLA 237
+ L M + ++P S++ L+
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALS 429
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 124 DSFIVPSVLKACSLIPSFQLG---EEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYAR 180
DS + VLKA S F LG +VH FV++ GF DVFV N +I Y + ++ AR
Sbjct: 128 DSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESAR 187
Query: 181 QLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPSEIAMISIVHVLAEL 239
++FD+M +DVVSW++MI Y ++G ++ + K M + KP+ + +IS+ +
Sbjct: 188 KVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQS 247
Query: 240 ADL 242
+DL
Sbjct: 248 SDL 250
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRR-TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ Y ++ E+ K+Y M +D + + V SV +AC G EVH +
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++N D+ +CNA+I Y + GSL YAR LFD+M KD V++ +I Y +GL+ EA+
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 212 DLLKDMRVAGVKPSEIAMIS 231
L +M G+ AMIS
Sbjct: 321 ALFSEMESIGLSTWN-AMIS 339
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 83/155 (53%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
S G + ++ +I+ ++NN E + + M R + ++ + S+L + + + + G+E
Sbjct: 328 SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE 387
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H F ++NG +++V ++I Y + G L A+++FD + +++W+ +I +Y +G
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGD 447
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
D A L M+ G KP ++ + +++ A D
Sbjct: 448 SDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 26/199 (13%)
Query: 61 QQIHGHFIKTCSSCSFQLPILALGYYSS------------------GAAIYSFLITSYIK 102
+QIH K + Q+ +G+YSS +++ +I++Y +
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 103 NNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG--FHGDV 160
N A++++ M E+D IV L AC+ + + Q+GEE++ +K D+
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
+ N+L+ MY + G AR+LFD+ + KDV ++++MI Y NG E+L+L K M+
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 221 G------VKPSEIAMISIV 233
+ P+++ I ++
Sbjct: 265 DQSQDTVITPNDVTFIGVL 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 97 ITSYIKNNCPENAVKIYTY-MRRTDTEVDSFIVPSVLKACSLIPSFQL-GEEVHDFVVKN 154
+ Y+++ P A+ + + R++ + VDSF V +K S + L G ++H V K
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEALDL 213
GF+ + + +L+ Y G + YARQ+FD+ K ++V W+ MI +Y N EA++L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 214 LKDMRVAGVKPSEIAMISIVHVLAELADL 242
K M + E+ + + L+ ADL
Sbjct: 155 FKRMEAEKI---ELDGVIVTVALSACADL 180
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 81/145 (55%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ +++N ++A+ ++ M+ D + D F + S+L AC+ + + + G +H+++V
Sbjct: 226 WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+N F + V ALI MY + G + +F+ K + W++MI NG + A+D
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMD 345
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
L ++ +G++P ++ I ++ A
Sbjct: 346 LFSELERSGLEPDSVSFIGVLTACA 370
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHD 149
+++ +I + +++ PE A+ I+ M + V PSV KA + + G ++H
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
V+K G D F+ N ++ MY G L A ++F M+G DVV+W++MI + + GL+D+
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQ 210
Query: 210 -------------------------------ALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
ALD+ ++M+ VKP M+S+++ A
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 239 LA 240
L
Sbjct: 271 LG 272
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A++ + M + DSF V S+L AC + S ++GEE++D K ++ V NA +
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
M+ + G+ AR LF++M ++VVSWSTMI Y NG EAL L M+ G++P+ +
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 229 MISIV 233
+ ++
Sbjct: 314 FLGVL 318
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ L Y++N P ++ +Y MR D F P V+KA S + F G +H V
Sbjct: 76 LWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV 135
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK GF V L+MMY + G L A LF+ M KD+V+W+ + + G AL
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ M V+ ++S++ +L L++
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 127 IVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM 186
++ +L+A S P QL +++H V++ GF + L+ G + YARQ+FD+M
Sbjct: 12 MLSELLRASSSKPK-QL-KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69
Query: 187 VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ W+T+ + Y RN L E+L L K MR GV+P E +V +++L D
Sbjct: 70 HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%)
Query: 106 PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNA 165
PE A+ ++ +R+ D + SVLKAC+ + + + +H V+K GF D + N+
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
LI Y + GSL ++FD M +DVVSW++M+++Y +G +D L + + M + +
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSAT 469
Query: 226 EIAMIS 231
IA++S
Sbjct: 470 FIALLS 475
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LIT Y++ + +++ M + + F + SVL +C P G++VH +
Sbjct: 130 WTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRYEP----GKQVHGLAL 184
Query: 153 KNGFHGDVFVCNALIMMYG---EGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
K G H ++V NA+I MYG +G + A +F+ + K++V+W++MI ++ L +
Sbjct: 185 KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKK 244
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
A+ + M GV +++I L + +DL
Sbjct: 245 AIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKN--GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV 187
++ +AC+ + G +H ++ + + +V + N LI MY + G++ YARQ+FD M
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 188 GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
++VVSW+ +I Y + G E L M ++ P+E + S++
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVL 168
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 19/195 (9%)
Query: 58 DQTQQIHGHFIKTCSS-------------CSFQLPILALGYYSS----GAAIYSFLITSY 100
DQ Q+H + +K+ S C + P++A + S +S L++ +
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 101 IKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV 160
+ N + ++ +++ M R + F + LKAC L+ + + G ++H F +K GF V
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
V N+L+ MY + G + A ++F ++V + ++SW+ MI + G +ALD M+ A
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 221 GVK--PSEIAMISIV 233
+K P E + S++
Sbjct: 203 NIKERPDEFTLTSLL 217
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 40 KAKDTQPLQQKPNVQLNLDQ------------------TQQIHGHFIKTCSSCSFQLPI- 80
KA DT + Q+ N++ D+ +QIHG +++ C I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 81 -------LALGY-YSSGAAI----------YSFLITSYIKNNCPENAVKIYTYMRRTDTE 122
+ GY +S+ A +S LI Y + A+ ++ ++ +++
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
+DSF + S++ + + G+++ VK + V N+++ MY + G + A +
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKC 370
Query: 183 FDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
F +M KDV+SW+ +I YG++GL +++ + +M ++P E+ ++++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
S+L+ C+ G +VH +++K+G ++ N LI MY + A ++FD M +
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+VVSWS ++ + NG L +L L +M G+ P+E
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNE 107
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 32 PTLKFTHFKAKDTQPLQQKPN-VQLNLDQTQQIHGHFIKTCSSCS-FQLP-ILALGYYSS 88
P LK FK +D+ P Q + V+ LD + I SS F L G
Sbjct: 109 PLLKAV-FKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK 167
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
++ +I +++N A+ + M++T + V SVLKA + + G VH
Sbjct: 168 DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVH 227
Query: 149 DFVVKNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
++ G DVF+ ++L+ MYG+ A+++FD+M ++VV+W+ +I Y ++
Sbjct: 228 GLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
D+ + + ++M + V P+E + S++ A + L
Sbjct: 288 DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
S ++ LI Y+++ C + + ++ M ++D + + SVL AC+ + + G
Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VH +++KN + LI +Y + G L A +F+++ K+V +W+ MI + +G
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
+A DL M + V P+E+ ++++ A
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 113 YTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE----EVHDFVVKNGFHGDVFVCNALIM 168
Y +MRR P +LKA F+L + + H +VK G D FV N+LI
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAV-----FKLRDSNPFQFHAHIVKFGLDSDPFVRNSLIS 146
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
Y G +A +LFD KDVV+W+ MI + RNG EA+ +M+ GV +E+
Sbjct: 147 GYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 229 MISIVHVLAELADLKL 244
++S++ ++ D++
Sbjct: 207 VVSVLKAAGKVEDVRF 222
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+S +I+ Y + + E AVK + +R + + +SF S+ +ACS++ +G +VH
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K G + +ALI MY + G L A ++F+ M D+V+W+ I + G EAL
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEAL 473
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
L + M G+KP+ + I+++
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVL 495
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 57 LDQTQQIHGHFIKT--CSSCSFQLPILAL----GYYSSGAAIY-----------SFLITS 99
LD +QIH H I+ CS+ S + I+ + G+ ++ + L+
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
Y + +A+K++ + E DSF+ VLKAC+ + LG+++H V K G +
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
V V L+ Y + S A + F ++ + VSWS +I Y + +EA+ K +R
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 108 NAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALI 167
A + M + V S+ + +AC + S G +HD + + V + N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKP 224
MY E SL A +LFD+M + VS +TMI +Y G+LD+A+ L M +G KP
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I++Y + + AV +++ M + + S + ++LK+ + G ++H V++ G
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
+ + ++ MY + G L A+++FD+M K V+ + ++ Y + G +AL L
Sbjct: 215 LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 216 DMRVAGVKPSEIAMISIVHVLAELADLKL 244
D+ GV+ ++ A L +L L
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNL 303
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ L+T + + E A+ + YM +D +P + A + + + + G+ +H + V
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+GF G V N+L+ MY + GSL A+++F+++ DVVSW+ ++ NG + AL
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA--ELADLKL 244
++MR+ +P + + ++ + L DL L
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL 649
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+++ K+ +A+ ++ M + T + F SV+++C+ + G VH V+
Sbjct: 92 WTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI 151
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF G+ V ++L +Y + G A +LF + D +SW+ MI S EAL
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQ 211
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+M AGV P+E + ++
Sbjct: 212 FYSEMVKAGVPPNEFTFVKLL 232
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +++ +++N + AV + MR + ++F ++L CS + S G+++H
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 152 VKNGFHGDVFVCNALIMMYGE-GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+K GF V NAL+ MY + S A ++F MV +VVSW+T+I +G + +
Sbjct: 352 IKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDC 411
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
LL +M V+P+ + + ++ ++L ++
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 133 KACSLIPSF------QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM 186
K+C I SF ++G +H V+K G ++ +CN L+ +Y + + AR+LFD+M
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 187 VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ V +W+ MI ++ ++ AL L ++M +G P+E S+V A L D+
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDI 140
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 56 NLDQTQQIHGHFIKT------------------CSSCSFQLPILALGYYSSGAAIYSFLI 97
+LD +QIH IK CS+ + + S ++ LI
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 98 TSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH 157
+ + ++ + M + + E + + VL+ACS + + E+H ++++
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVD 459
Query: 158 GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
G++ V N+L+ Y + YA + M +D +++++++ + G + AL ++ M
Sbjct: 460 GEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 218 RVAGVKPSEIAMISIVHVLAELADLK 243
G++ ++++ + A L L+
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALE 545
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
+ F V S+LKACS + + G +VH VVK DVFV +L+ MY + G + R++F
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D M ++ V+W+++I ++ R G +EA+ L + M+ + + + ++SI+ + L
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 244 L 244
L
Sbjct: 403 L 403
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
G + ++ +I ++ + E A+ ++ M+R ++ V S+L+AC + + L
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G+E+H ++KN +V++ + L+ +Y + G A + ++ +DVVSW+ MI
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 204 NGLLDEALDLLKDMRVAGVKPS 225
G EALD LK+M GV+P+
Sbjct: 464 LGHESEALDFLKEMIQEGVEPN 485
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A+ M + E + F S LKAC+ S +G +H KN +VFV +ALI
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
MY + G + A ++FD M K++VSW MI Y RNG EAL L+ M G + +
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 229 MISIVHVLAELADLKL 244
+I L+ D++L
Sbjct: 590 FATI---LSTCGDIEL 602
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYT-YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y+K + A ++ Y++ + + +L CS F+LG +VH +
Sbjct: 151 WTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G G++ V ++L+ Y + G L A + FD M KDV+SW+ +I + R G +A+
Sbjct: 211 VKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAI 269
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ M P+E + SI+ +E L+
Sbjct: 270 GMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 142 QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY 201
+L + +H +K ++ N LI G L YAR++FD M K+ V+W+ MI Y
Sbjct: 99 RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 202 GRNGLLDEALDLLKDMRVAGVK-PSEIAMISIVHVLAELADLKL 244
+ GL DEA L +D G++ +E + ++++ + A+ +L
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++T + N P +++ + M + E D+ V+ ACS I LGE +H V+
Sbjct: 257 WNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVI 316
Query: 153 KNGF--HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K+G+ V V N++I MY + G A +F+++V +DV+S + ++ + NG+ +EA
Sbjct: 317 KSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEA 376
Query: 211 LDLLKDMR-VAGVKPSEIAMISIVHVLAELA 240
+L M+ V ++P ++SI + +L+
Sbjct: 377 FGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +IT+ +N AV ++ M E DS + A S + + +H
Sbjct: 155 VWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLA 214
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ G GD +CNAL+ +Y +G +L A +F M +D+VSW+T++ NG ++L
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSL 274
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
K M +G + + ++ + + +L L
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
++ + N E A I M+ D + D V S+ C + + G VH + V+
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 155 GFHGDVF-VCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
V N++I MYG+ G A LF +D+VSW++MI ++ +NG +A +L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 214 LKDMRVAGVKPSEIAMISIVHVL 236
K++ V+ S+ ++ +++ +L
Sbjct: 483 FKEV-VSEYSCSKFSLSTVLAIL 504
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 111 KIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMY 170
+++ R E + +L A + + S G + H +++ GF + FV AL+ MY
Sbjct: 665 EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMY 724
Query: 171 GEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV-AGVKPSEIAM 229
G L ++F + +W+++I ++G +G+ ++A++L K++ + ++P++ +
Sbjct: 725 SSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 230 ISIV 233
IS++
Sbjct: 785 ISLL 788
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 117 RRTDTEVDSFI-VPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGS 175
R T SF+ + VL++ + + VH F +K G D+ + L+ YG G
Sbjct: 78 RENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGE 137
Query: 176 LGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
L + LFD++ KDV+ W++MI + +NG A+ L +M
Sbjct: 138 LVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 84/146 (57%), Gaps = 7/146 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT---EVDSFIVPSVLKACSLIPSFQLGEEVHD 149
++ +IT Y++N E A+ +++ M R + V +++ S+L ACS + G+++H
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV--SILSACSDLAGLVEGQQIHQ 355
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK--MVGKDVVSWSTMIRSYGRNGLL 207
+ K+ + V +AL+ MY + G L AR++FD + +D++SW++MI Y +G
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHG 415
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIV 233
EA+++ MR G KPS + ++++
Sbjct: 416 KEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM- 217
D N +I + + A LFD+M K+V+SW+TMI Y N +EAL++ M
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 218 RVAGVKPSEIAMISIVHVLAELADL 242
R VKP+ +SI+ ++LA L
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGL 347
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 111 KIYTYMRRTDTEVDSF---IVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALI 167
+++ R+ E+ F + ++L ACS + + G+E+H ++K+ DV + N+L+
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
MYG+ G + Y+R++FD M+ KD+ SW+ M+ Y NG ++E ++L + M +GV P I
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 228 AMISIV 233
++++
Sbjct: 440 TFVALL 445
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ + Y +N P +A+ +Y M + E +F + LKAC + ++G +H +
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK D V N L+ +Y E G AR++FD M ++VV+W+++I + + E
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMF 322
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+L + M+ + S + +I+ + +A L
Sbjct: 323 NLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y KN + AV ++ M + D + S+L A + + + +LG ++H VV
Sbjct: 377 WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGLLDEAL 211
K DV V NALI MY G + +R++FD+M + ++V++W+ MI Y +G EAL
Sbjct: 437 KTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEAL 495
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLA 237
+L M+ G+ PS I +S+++ A
Sbjct: 496 NLFGSMKSNGIYPSHITFVSVLNACA 521
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y+K A K++ M + D + ++ + +C I + ++ D +
Sbjct: 74 WNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV-SCGGIRFLEEARKLFDEMP 132
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
D F N +I Y + +G A LF+KM ++ VSWS MI + +NG +D A+
Sbjct: 133 SR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVV 188
Query: 213 LLKDMRVAGVKP 224
L + M V P
Sbjct: 189 LFRKMPVKDSSP 200
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 8/152 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y+K +A ++ M+ DT + ++ + + +F L E+ +
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN--- 340
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
D N ++ Y G++ AR F+K K VSW+++I +Y +N EA+D
Sbjct: 341 -----RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L M + G KP + S++ L +L+L
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ L++SY + P + Y D F P V KAC + G+++H V
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF+ D++V N+L+ YG G A ++F +M +DVVSW+ +I + R GL EALD
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 213 LLKDMRV 219
M V
Sbjct: 194 TFSKMDV 200
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ + + A+ +++ M+ + + D I+ SVL AC+ + + G VH+++
Sbjct: 273 WNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI 332
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ G D + A++ MY + G + A ++F+ + K+V +W+ ++ +G E+L
Sbjct: 333 LTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESL 392
Query: 212 DLLKDMRVAGVKPSEIAMIS 231
++M G KP+ + ++
Sbjct: 393 RYFEEMVKLGFKPNLVTFLA 412
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT + + + A+ ++ M D E + VL + + LG+ +H ++
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K + NALI MY + L A ++F ++ KD VSW++MI EA+D
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID 291
Query: 213 LLKDMRV-AGVKPSEIAMISIVHVLAELA 240
L M+ +G+KP + S++ A L
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLG 320
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y +N A+ ++ M D + +V+ AC+ + ++G+EVH + +
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+NGF DV++ +AL+ MY + GSL A +F + K++ W+++I +G EAL
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 1119
Query: 213 LLKDMRVAGVKPSEIAMISI 232
+ M + VKP+ + +S+
Sbjct: 1120 MFAKMEMESVKPNAVTFVSV 1139
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 53 VQLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSS----GAAIYSFLITSYIKNNCPEN 108
++ +L+Q ++ FI C+S F+ LA+ + +Y+ L ++ + P
Sbjct: 797 IKTSLNQDCRLMNQFITACTS--FKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIR 854
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
++++Y M R S+ S++KA S F GE + + K GF V + LI
Sbjct: 855 SLELYVRMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLID 912
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
Y G + AR++FD+M +D ++W+TM+ +Y R +D A L M
Sbjct: 913 FYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM 961
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%)
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
N LI Y G+L A LF++M KD++SW+TMI+ Y +N EA+ + M G+
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGII 1029
Query: 224 PSEIAMISIVHVLAELADLKL 244
P E+ M +++ A L L++
Sbjct: 1030 PDEVTMSTVISACAHLGVLEI 1050
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 97/194 (50%), Gaps = 17/194 (8%)
Query: 59 QTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI-----------------YSFLITSYI 101
+ +++H +KTC + + L Y+ I +S ++ Y+
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 102 KNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVF 161
+N E A+ +Y +R E + F + SV+ ACS + + G+++H + K+GF +VF
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 162 VCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG 221
V ++ + MY + GSL + +F ++ K++ W+T+I + ++ E + L + M+ G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 222 VKPSEIAMISIVHV 235
+ P+E+ S++ V
Sbjct: 360 MHPNEVTFSSLLSV 373
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%)
Query: 127 IVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM 186
+V +L+ C+ + + H +++ GDV + N LI Y + G + ARQ+FD M
Sbjct: 63 LVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 187 VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+ + +VSW+TMI Y RN + EALD+ +MR G K SE + S++
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 169
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y +N A+ I+ MR + F + SVL AC + +++H V
Sbjct: 130 WNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSV 189
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K +++V AL+ +Y + G + A Q+F+ M K V+WS+M+ Y +N +EAL
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L + + ++ ++ + S++ + LA L
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 74/127 (58%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
+++++ + M+ + +S + +L C+ +P+ LG E+H V++ ++ V NAL
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+ MY + G L +F+ + KD++SW+++I+ YG +G ++AL + M +G P
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 227 IAMISIV 233
IA+++++
Sbjct: 536 IALVAVL 542
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 78/142 (54%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ ++ + + + ENA+++Y MR+ D +I+P +L+AC + F L H V
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ G ++ V N L+ +Y + G +G A LF +M ++ +SW+ MI+ + + + A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+ + M+ KP E+ S++
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVL 266
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E+ +K + MR + V + C+ + + + E+VH +V+K GF + NAL
Sbjct: 276 EDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNAL 335
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR----VAGV 222
I +YG+ G + A LF ++ K + SW+++I S+ G LDEAL L ++ V V
Sbjct: 336 IHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 223 KPSEIAMISIV 233
K + + S++
Sbjct: 396 KANVVTWTSVI 406
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPS------VLKACSLIPSFQLGEE 146
++ L + Y++N + + ++ M+ +VD + P L+AC+ + + G++
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMK---NDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
VHDF+ +NG G + + N L+ MY GS+ A Q+F M ++VVSW+ +I NG
Sbjct: 239 VHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGF 298
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIV 233
EA++ +M G+ P E + ++
Sbjct: 299 GKEAIEAFNEMLKFGISPEEQTLTGLL 325
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 81/141 (57%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y K+ A++++ M + E D + +VL AC+ + S +LGE + +V
Sbjct: 218 WTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVD 277
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G + V + NA+I MY + G++ A +F+ + ++VV+W+T+I +G EAL
Sbjct: 278 HRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALA 337
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M AGV+P+++ I+I+
Sbjct: 338 MFNRMVKAGVRPNDVTFIAIL 358
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A+ +Y + + D+F P VLK + G ++H VV GF V V LI
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 169 MYGEGGSLGYARQLFDKMVGKDV---------------------------------VSWS 195
MY G LG AR++FD+M+ KDV VSW+
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 196 TMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+I Y ++G EA+++ + M + V+P E+ +++++ A+L L+L
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 268
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 70/113 (61%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
+ ++C+ + S + ++VHD +++ F GD + N +I M+GE S+ A+++FD MV KD
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 191 VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ SW M+ +Y NG+ D+AL L ++M G+KP+E +++ A + ++
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 20/180 (11%)
Query: 58 DQTQQIHGHFIKT-----------------CSSCSFQLP---ILALGYYSSGAAIYSFLI 97
++ +QIH +KT S+ S LP I+ G+ +++ +I
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 98 TSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFH 157
+ ++ PE ++ +Y M + +++ PS+LKACS + +F+ ++H + K G+
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYE 147
Query: 158 GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
DV+ N+LI Y G+ A LFD++ D VSW+++I+ Y + G +D AL L + M
Sbjct: 148 NDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM 207
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 78/144 (54%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I+ Y++ + + A++++ M+ +D E D+ + + L AC+ + + + G+ +H
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
++ K D + LI MY + G + A ++F + K V +W+ +I Y +G E
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
A+ +M+ G+KP+ I +++
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVL 355
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 77/141 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y + + A ++ M + + D+ V S+L AC+ LG +H +
Sbjct: 283 WTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILK 342
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++ + +V NAL+ MY + G+L A +F+ + KD+VSW+TM+ G +G EA++
Sbjct: 343 RSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIE 402
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L MR G++P ++ I+++
Sbjct: 403 LFSRMRREGIRPDKVTFIAVL 423
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
Query: 45 QPLQQKPNVQLNLDQTQQIHGHFIKTCSSCSFQLP---ILALGY-YSSGAAIYSF----- 95
+ LQ P NL+Q +Q+H I+ + I AL + A+ F
Sbjct: 21 ERLQDLPKCA-NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE 79
Query: 96 --------LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
LI ++ +N+ P A +++ M+R D+F P +LKACS + + +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGY--ARQLFDKMVGKDVVSWSTMIRSYGRNG 205
H+ + K G D++V NALI Y G LG A +LF+KM +D VSW++M+ + G
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 206 LLDEALDLLKDM 217
L +A L +M
Sbjct: 200 ELRDARRLFDEM 211
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 47/262 (17%)
Query: 27 NQPQSPTLKFTH----FKAKDTQPLQQ----KPNVQLNLDQTQQIHGHFIKTCSSCSFQL 78
NQ Q P + + A+++QP Q + L + +K CS S+ L
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSW-L 133
Query: 79 PILALGY-------YSSGAAIYSFLITSYIKNNCP----ENAVKIYTYMRRTDTEVDSFI 127
P++ + + SS + + LI Y + C +A+K++ M DT + +
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCY--SRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 128 VPSVLKACSLIPSFQLGEEV--HDFVVKNGFHGDVFVC---------------------N 164
+ ++KA L + +L +E+ D + N C +
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWS 251
Query: 165 ALIMMYGEGGSLGYARQLFDKMV--GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGV 222
++M Y + G + AR +FDKM K+VV+W+ +I Y GLL EA L+ M +G+
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGL 311
Query: 223 KPSEIAMISIVHVLAELADLKL 244
K A+ISI+ E L L
Sbjct: 312 KFDAAAVISILAACTESGLLSL 333
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ + +N A+K++ M + + + + V SVL AC+ + ++G + +
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEA 210
+NGF +++VCNA I MY + G + A++LF+++ +++ SW++MI S +G DEA
Sbjct: 242 RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L L M G KP + + ++
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLL 324
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 118 RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLG 177
R+ E DSF +++ A + + + V D + K DV V NA+I Y G +
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMK 165
Query: 178 YARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPSEIAMISIVHVL 236
A +LFD M K+V SW+T+I + +NG EAL + M + VKP+ I ++S++
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPAC 225
Query: 237 AELADLKL 244
A L +L++
Sbjct: 226 ANLGELEI 233
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ +++ A +++ M T + D+ + S+L CS + LG+E+H +
Sbjct: 416 WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYT 475
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++N F + FVC ALI MY + G+ A +F + +W++MI Y +GL AL
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRAL 535
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+MR G+KP EI + ++
Sbjct: 536 SCYLEMREKGLKPDEITFLGVL 557
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ LI Y +N +A K++ M + + + ++L C G VH
Sbjct: 118 VWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVA 177
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K+G D V NALI Y + LG A LF +M K VSW+TMI +Y ++GL +EA+
Sbjct: 178 AKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAI 237
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+ K+M V+ S + +I+++
Sbjct: 238 TVFKNMFEKNVEISPVTIINLL 259
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSL-IPSFQLG-EEVHDFVVK 153
L+ S I + + I+ + R+ + F + L+A + SF+L E+V + K
Sbjct: 19 LLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTK 78
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
+G V+V +L+ +Y + G + A+ LFD+M +D V W+ +I Y RNG +A L
Sbjct: 79 SGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKL 138
Query: 214 LKDMRVAGVKPSEIAMISIV 233
M G PS +++++
Sbjct: 139 FIVMLQQGFSPSATTLVNLL 158
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+++ Y + + AV ++ R+ ++D+ + +L C +G +H + +K+G
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
V N LI MY + + LF+++ ++SW+++I ++G A ++
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFH 437
Query: 216 DMRV-AGVKPSEIAMISIVHVLAELADLKL 244
M + G+ P I + S++ ++L L L
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 50/234 (21%)
Query: 59 QTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI-----------------YSFLITSYI 101
+ +++HG+ +K + +G Y+S I ++ LI+SY+
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 102 KNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV 160
N E+A+ ++ M + ++ + D + S L ACS + + ++GE ++ FVV F V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSV 182
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGK------------------------------- 189
+ NAL+ M+ + G L AR +FD M K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
DVV W+ M+ Y + DEAL+L + M+ AG++P ++S++ A+ L+
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 82/154 (53%), Gaps = 1/154 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ ++ S + ++ +R D+F +P VLK+ + GE+VH +
Sbjct: 13 MYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK G D +V N+L+ MY G + ++FD+M +DVVSW+ +I SY NG ++A+
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLAELADLKL 244
+ K M + + +K E ++S + + L +L++
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 78/142 (54%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ ++ Y++ N + A++++ M+ D+F++ S+L C+ + + G+ +H ++
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+N D V AL+ MY + G + A ++F ++ +D SW+++I NG+ AL
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRAL 365
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
DL +M GV+ I ++++
Sbjct: 366 DLYYEMENVGVRLDAITFVAVL 387
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 28/188 (14%)
Query: 58 DQTQQIHGHFIKT-------------CSSCSFQLPILA-----------LGYYSSGAAIY 93
D QIHG IKT + S + P LA + +S G
Sbjct: 26 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 94 SFLITSYIKNNC----PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
FL + IK++ P A+ + M VD F + VLKACS + + G ++H
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
F+ K G D+F+ N LI +Y + G LG +RQ+FD+M +D VS+++MI Y + GL+
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 210 ALDLLKDM 217
A +L M
Sbjct: 206 ARELFDLM 213
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSF-QLGE-----E 146
Y+ ++ Y++N A++I++ D E +S ++P ++P+ QLG +
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFS-----DMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID 371
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H ++V+ F+ + ALI MY + GS+ +A +F+ + K + W+ MI +GL
Sbjct: 372 MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGL 431
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVH 234
+ A D+L + +KP +I + +++
Sbjct: 432 GESAFDMLLQIERLSLKPDDITFVGVLN 459
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I Y N A+ ++ M+ + + + + SVL C LI + +LG VH
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K G D V NAL+ MY + A+ +F+ KD+V+W+++I + +NG + EAL
Sbjct: 370 IKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEAL 428
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L M V P+ + + S+ A L L
Sbjct: 429 FLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 83/152 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y+KN+ E + ++ MR + + + +++ AC+ + + G+ H +V
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G + +L+ MY + G + AR++F++ D+V W+ MI Y NG ++EAL
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
L + M+ +KP+ + + S++ + +L+L
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ + +N A+ ++ M + V S+ AC+ + S +G +H + V
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 153 KNGF--HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K GF V V AL+ Y + G AR +FD + K+ ++WS MI YG+ G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L+L ++M KP+E SI+
Sbjct: 531 LELFEEMLKKQQKPNESTFTSIL 553
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ ++ Y N VK+Y + + D + LKAC+ + G+++H +
Sbjct: 109 LWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
VK +V V L+ MY + G + A ++F+ + ++VV W++MI Y +N L +E L
Sbjct: 169 VKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGL 227
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L MR V +E +++ +L+ L
Sbjct: 228 VLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 76/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y++ + + IY MR+ D + SV +ACS + + G+ H ++
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K ++ V +AL+ MY + S ++FD++ ++V++W+++I YG +G + E L
Sbjct: 237 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLK 296
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M+ G +P+ + + ++
Sbjct: 297 CFEKMKEEGCRPNPVTFLVVL 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
+L+ C + G+ +H + GF + ++ L+++Y G L A LF + +D
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRD 173
Query: 191 VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++ W+ MI Y + GL E L + DMR + P + S+ + L L+
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLE 226
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y++ C +++I+ M+ D F + SVL AC+ + S ++GE + ++
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYID 395
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
KN DV V NALI MY + G A+++F M +D +W+ M+ NG EA+
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M+ ++P +I + ++
Sbjct: 456 VFFQMQDMSIQPDDITYLGVL 476
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP-SFQLGEEVHDF 150
+++ +I + K +C V++Y M + DS P +L + G+++H
Sbjct: 101 VWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCH 160
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
VVK G +++V NAL+ MY G + AR +FD+ +DV SW+ MI Y R +E+
Sbjct: 161 VVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEES 220
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
++LL +M V P+ + ++ ++ +++ D L
Sbjct: 221 IELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 31/183 (16%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y + E ++++ M R S + VL ACS + L + VH++V
Sbjct: 204 WNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVS 263
Query: 153 K--------------NGFHG-----------------DVFVCNALIMMYGEGGSLGYARQ 181
+ N + DV +++ Y E G+L AR
Sbjct: 264 ECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLART 323
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
FD+M +D +SW+ MI Y R G +E+L++ ++M+ AG+ P E M+S++ A L
Sbjct: 324 YFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 242 LKL 244
L++
Sbjct: 384 LEI 386
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 79/144 (54%), Gaps = 3/144 (2%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I + +ITS+ ++ P A++++T M + D F V S+L S++ LG++VH +
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYT 476
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K+G D+ V ++L +Y + GSL + +LF + KD W++MI + G L EA+
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 212 DLLKDMRVAGVKPSEIAMISIVHV 235
L +M G P E + +++ V
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTV 560
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A ++ +I+ + + A+ +++ M T D + +VL CS PS G+E+H +
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++ G + + +AL+ MY + GSL ARQ++D++ D VS S++I Y ++GL+ +
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLA 237
L +DM ++G A+ SI+ A
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKAAA 663
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 79/140 (56%)
Query: 94 SFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVK 153
S LI+ Y ++ ++ ++ M + +DSF + S+LKA +L LG +VH ++ K
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK 680
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
G + V ++L+ MY + GS+ + F ++ G D+++W+ +I SY ++G +EAL +
Sbjct: 681 IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQV 740
Query: 214 LKDMRVAGVKPSEIAMISIV 233
M+ G KP ++ + ++
Sbjct: 741 YNLMKEKGFKPDKVTFVGVL 760
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
DS+ SVL AC+ + + G+ V V+K G DVFVC A++ +Y + G + A ++F
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
++ VVSW+ M+ Y ++ AL++ K+MR +GV+ + + S++
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +++ Y K+N +A++I+ MR + E+++ V SV+ AC +VH +V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLF---DKMVGKDVVSWSTMIRSYGRNGLLDE 209
K+GF+ D V ALI MY + G + + Q+F D + +++V + MI S+ ++ +
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVL 236
A+ L M G++ E ++ S++ VL
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVL 463
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
DVF+ +L+ Y GS+ A +LFD + DVVS + MI Y ++ L +E+L M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 219 VAGVKPSEIAMISIVHVLAEL 239
G + +EI+ S++ + L
Sbjct: 143 FLGFEANEISYGSVISACSAL 163
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRR--TDTEVDSFIVPSVLKACSLIPSFQL 143
Y ++ +IT+Y +N A++++ T + F++ SV+ ACS + Q
Sbjct: 195 YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQW 254
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G+ H V + G+ + V +L+ MY + GSL A ++F ++ V+S+++MI + +
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIVH 234
+GL + A+ L +M + P+ + ++ ++H
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I+ Y P+NA+ ++ M D V + + SV KACS + ++G+ +H
Sbjct: 98 WTSVISGYNDMGKPQNALSMFQKMHE-DRPVPPNEYTFASVFKACSALAESRIGKNIHAR 156
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV--GKDVVSWSTMIRSYGRNGLLD 208
+ +G ++ V ++L+ MYG+ + AR++FD M+ G++VVSW++MI +Y +N
Sbjct: 157 LEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGH 216
Query: 209 EALDLLKDMRVA--GVKPSEIAMISIVHVLAELADLK 243
EA++L + A + ++ + S++ + L L+
Sbjct: 217 EAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGL 206
+H +K GF D F N L++ Y + + AR+LFD+M +VVSW+++I Y G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 207 LDEALDLLKDMRVAG-VKPSEIAMISIVHVLAELADLKL 244
AL + + M V P+E S+ + LA+ ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI 149
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 106 PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNA 165
PE V +YT M + D + VLKACS + G H VV++GF + +V NA
Sbjct: 93 PEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNA 152
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
LI+ + G LG A +LFD V+WS+M Y + G +DEA+ L +M
Sbjct: 153 LILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV- 151
++ +I+ Y+ P+ A+ I+ MR D + S+L AC+++ + G+ +H ++
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 152 ----VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
V + + + NALI MY + GS+ A ++F + +D+ +W+T+I +
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-A 361
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIV 233
+ ++++ ++M+ V P+E+ I ++
Sbjct: 362 EGSIEMFEEMQRLKVWPNEVTFIGVI 387
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 83/153 (54%), Gaps = 2/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y+ + + A+ T MR+ +D+ + +L CS I Q+G++ H F+
Sbjct: 363 WNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEAL 211
++G+ +V V NAL+ MYG+ G+L A F +M +D VSW+ ++ R G ++AL
Sbjct: 423 RHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQAL 482
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ M+V KPS+ + +++ A + L L
Sbjct: 483 SFFEGMQVEA-KPSKYTLATLLAGCANIPALNL 514
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+T + E A+ + M+ + + + + ++L C+ IP+ LG+ +H F++
Sbjct: 465 WNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
++G+ DV + A++ MY + YA ++F + +D++ W+++IR RNG E +
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE 583
Query: 213 LLKDMRVAGVKPSEIAMISIVH 234
L + GVKP + + I+
Sbjct: 584 LFMLLENEGVKPDHVTFLGILQ 605
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT+ +N + +++ M R VLK+C LI +L ++H VV
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G+ G+V + +++ +YG+ + AR++FD++V VSW+ ++R Y G DEA+
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 213 LLKDMRVAGVKP 224
+ M V+P
Sbjct: 250 MFFKMLELNVRP 261
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y++ + AV ++ M + + V SV+ ACS + ++G+ +H V
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAV 290
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K D V ++ MY + L AR++FD+ KD+ SW++ + Y +GL EA +
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARE 350
Query: 213 LLKDM 217
L M
Sbjct: 351 LFDLM 355
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
+F+ N I YG+ G + AR+LF++M +D SW+ +I + +NG+ DE + + M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 220 AGVKPSEIAMISIVHVLAELADLKL 244
GV+ +E + ++ + DL+L
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRL 180
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI + + E A+ Y M + + + + +VL ACS + G +H +++
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
NG D + AL+ MY + G L A +F M KD++SW+ MI+ + +G +A+
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M +G KP E+ ++++
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVL 401
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 70 TCSSCSFQLPILALGYYSSGAAIYSFLITSYIK----NNCPENAVKIYTYMRRTDTEVDS 125
+CSS + P +L + + F++ + I+ N E++V+ + M R + D
Sbjct: 68 SCSSL-LKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDR 126
Query: 126 FIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF-- 183
P VLK+ S + LG +H +KN D FV +L+ MY + G L +A Q+F
Sbjct: 127 LTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE 186
Query: 184 --DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
D++ + ++ W+ +I Y R + A L + M
Sbjct: 187 SPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM 222
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
+ LI Y + G L A+QLF+ M K+VVSW+T+I + + G + A+ +M G+K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 224 PSEIAMISIV 233
P+E + +++
Sbjct: 291 PNEYTIAAVL 300
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 77/146 (52%)
Query: 88 SGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
S + ++ L Y ++ P ++ +Y+ M+R + + P +LKAC+ G ++
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
V+K+GF DV+V N LI +YG AR++FD+M ++VVSW++++ + NG L
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKL 195
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIV 233
+ + +M P E M+ ++
Sbjct: 196 NLVFECFCEMIGKRFCPDETTMVVLL 221
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD 190
+L AC + LG+ VH V+ + + AL+ MY + G L YAR +F++MV K+
Sbjct: 220 LLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 191 VVSWSTMIRSYGRNGLLDEALDLL-KDMRVAGVKPSEIAMISIV 233
V +WS MI + G +EAL L K M+ + V+P+ + + ++
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVL 321
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIY-TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y ++ P +A+ ++ + + D V + L ACS I + + G +H FV
Sbjct: 226 WNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFV 285
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ +V VC LI MY + GSL A +F+ KD+V+W+ MI Y +G +AL
Sbjct: 286 KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 212 DLLKDMR-VAGVKPSEIAMISIVHVLA 237
L +M+ + G++P++I I + A
Sbjct: 346 RLFNEMQGITGLQPTDITFIGTLQACA 372
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 62/285 (21%)
Query: 11 AGFPFLHTSIEKSQNSNQPQSPTLKFTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKT 70
A P L TS+ ++Q S T F+ + L + ++D+ QIH ++
Sbjct: 2 ASSPLLATSLPQNQLS------TTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRH 55
Query: 71 CSSCSFQLPILAL----GYYSSGAAIYS------------FLITSYIK----NNCPENAV 110
+ P+L L Y S G +S FL T+ I N + A
Sbjct: 56 NLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAF 115
Query: 111 KIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMY 170
+Y + ++ + F S+LK+CS + G+ +H V+K G D +V L+ +Y
Sbjct: 116 LLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVY 171
Query: 171 GEG-------------------------------GSLGYARQLFDKMVGKDVVSWSTMIR 199
+G G++ AR LFD M +D+VSW+ MI
Sbjct: 172 AKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMID 231
Query: 200 SYGRNGLLDEALDLLKDMRVAGV-KPSEIAMISIVHVLAELADLK 243
Y ++G ++AL L + + G KP EI +++ + +++ L+
Sbjct: 232 GYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALE 276
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 4/133 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ LI+ + + N A+K++ MR+ + + + ++L AC + F LG ++H +
Sbjct: 148 YTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLI 207
Query: 152 VKNGFHGDVFVCNALIMMYGE--GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
VK+GF VFV N+L+ +Y + G S +LFD++ +DV SW+T++ S + G +
Sbjct: 208 VKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHK 267
Query: 210 ALDLLKDM-RVAG 221
A DL +M RV G
Sbjct: 268 AFDLFYEMNRVEG 280
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTE----VDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+I Y +N P+ AV ++ RT E +D + +L C + ++G ++H +
Sbjct: 491 IIGGYARNGLPDKAVSLF---HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSY--GRNGLLDE 209
+K G+ D+ + N+LI MY + A ++F+ M DV+SW+++I Y RNG DE
Sbjct: 548 LKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNG--DE 605
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
AL L M +KP I + ++
Sbjct: 606 ALALWSRMNEKEIKPDIITLTLVI 629
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +++S +K A ++ M R + VDSF + ++L +C+ G E+H
Sbjct: 250 ASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHG 309
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
++ G ++ V NALI Y + + L++ M+ +D V+++ MI +Y G++D
Sbjct: 310 RAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDS 369
Query: 210 ALDLLKDM 217
A+++ ++
Sbjct: 370 AVEIFANV 377
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ L+ + +N A+K++T M + E+ F + S + AC L+ ++ E++H F +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWST--MIRSYGRNGLLDEA 210
K G + + AL+ M + A ++FD+ S +T +I Y RNGL D+A
Sbjct: 445 KFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKA 504
Query: 211 LDLL 214
+ L
Sbjct: 505 VSLF 508
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S +I N + + ++R + + VL ACS SF+ G+ +H FV
Sbjct: 237 WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD-VVSWSTMIRSYGRNGLLDEAL 211
K G+ V V NALI MY G++ AR +F+ M K +VSW++MI +G +EA+
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAV 356
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLA 237
L +M GV P I+ IS++H +
Sbjct: 357 RLFNEMTAYGVTPDGISFISLLHACS 382
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 56 NLDQTQQIHGHFIK---------------TCS-SCSFQLPI---LALGYYSSGAAIYSFL 96
NL QIHG FIK C+ S S LP L L + A +++ L
Sbjct: 17 NLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTL 76
Query: 97 ITSYIKNNCPENAVKIYT-YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+ Y +++ P N+V ++ MR+ DSF V+KA S + G ++H +K+G
Sbjct: 77 VRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG 136
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
+FV LI MYG G + +AR++FD+M ++V+W+ +I + R + A ++
Sbjct: 137 LESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFD 196
Query: 216 DMRV 219
M V
Sbjct: 197 KMLV 200
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ +++ Y ++ A +++ + + ++ + +VL A S + ++G+ +HD V
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ G DV V ++I MY + G + AR+ FD+M K+V SW+ MI YG +G +AL
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+L M +GV+P+ I +S++
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVL 395
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTE------VDSFIVPSVLKACSLIPSFQLGEE 146
++ +I Y N +AV ++ + + + +DS + SV+ ACS +P+ L E
Sbjct: 145 WTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTES 204
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLG--YARQLFDKMVGKDVVSWSTMIRSYGRN 204
+H FV+K GF V V N L+ Y +GG G AR++FD++V KD VS+++++ Y ++
Sbjct: 205 IHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS 264
Query: 205 GLLDEALDLLKDM 217
G+ +EA ++ + +
Sbjct: 265 GMSNEAFEVFRRL 277
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I ++ A+ ++ MR+ P +KACS + G++ H
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G+ D+FV +ALI+MY G L AR++FD++ +++VSW++MIR Y NG +A+
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 213 LLKDMRV 219
L KD+ V
Sbjct: 164 LFKDLLV 170
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI +Y + AV+ + MR + + S+ AC+ + GE++H V+
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G + + V N+++ MY G+L A LF M +D++SWST+I Y + G +E
Sbjct: 338 SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFK 397
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
MR +G KP++ A+ S++ V +A
Sbjct: 398 YFSWMRQSGTKPTDFALASLLSVSGNMA 425
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +IT + + + ++ M R++ D++ LKAC+ + + G+ +H
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
V+ GF + V N+L MY E G + LF+ M +DVVSW+++I +Y R G +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
A++ MR + V P+E S+ A L+ L
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 53 VQLNLDQTQQIHGHFIKTCSSCS--FQLPILALGYYSSGAAIYSFLITSYIKNNCPENAV 110
+ L L+ + + +K S+C +L G +S +I Y + E
Sbjct: 337 LSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 111 KIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMY 170
K +++MR++ T+ F + S+L + + G +VH + G + V ++LI MY
Sbjct: 397 KYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMY 456
Query: 171 GEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMI 230
+ GS+ A +F + D+VS + MI Y +G EA+DL + G +P + I
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 231 SIVHVLAELADLKL 244
S++ L L
Sbjct: 517 SVLTACTHSGQLDL 530
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I Y+ N + A+ +++ MR D V D+ ++ VLKAC + GE +H +
Sbjct: 74 WTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAY 133
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
VK V+V ++L+ MY G + + ++F +M ++ V+W+ +I G E
Sbjct: 134 AVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEG 193
Query: 211 LDLLKDM 217
L +M
Sbjct: 194 LTYFSEM 200
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 125 SFIVPSVLKACSLIPS-FQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
SF++ S++ AC S F+ G +VH FV K+G DV+V A++ +YG G + +R++F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++M ++VVSW++++ Y G +E +D+ K MR GV +E +M ++ L D
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 244 L 244
L
Sbjct: 178 L 178
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPS--FQLGEEVHDF 150
++ LI Y ++ P+ A+ + MR + V SVL AC L+P + G+ +H +
Sbjct: 431 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC-LLPGDLLERGKPLHAY 489
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+V GF D V N+LI MY + G L ++ LF+ + +++++W+ M+ + +G +E
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 549
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L L+ MR GV + + + A+LA L+
Sbjct: 550 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ + +Y +N E + +I++ MRR EV+S V ++L + + G +H VV
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF V VCN L+ MY G A +F +M KD++SW++++ S+ +G +AL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 213 LLKDMRVAG 221
LL M +G
Sbjct: 349 LLCSMISSG 357
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+ Y PE + IY MR + + V+ +C L+ LG ++ VV
Sbjct: 128 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 187
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G + V N+LI M G G++ YA +FD+M +D +SW+++ +Y +NG ++E+
Sbjct: 188 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 247
Query: 213 LLKDMR 218
+ MR
Sbjct: 248 IFSLMR 253
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+ S++ + +A+ + M + V+ S L AC F+ G +H VV
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+G + + NAL+ MYG+ G + +R++ +M +DVV+W+ +I Y + D+AL
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ MRV GV + I ++S++
Sbjct: 450 AFQTMRVEGVSSNYITVVSVL 470
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E +K+ + MR +D F L A + + + G+++H VK GF D F+ NA
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
MY + G +G ++ V + + SW+ +I + GR+G +E +M G+KP
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 227 IAMISIV 233
+ +S++
Sbjct: 667 VTFVSLL 673
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 125 SFIVPSVLKACSLIPS-FQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
SF++ S++ AC S F+ G +VH FV K+G DV+V A++ +YG G + +R++F
Sbjct: 41 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 100
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
++M ++VVSW++++ Y G +E +D+ K MR GV +E +M ++ L D
Sbjct: 101 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 160
Query: 244 L 244
L
Sbjct: 161 L 161
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPS--FQLGEEVHDF 150
++ LI Y ++ P+ A+ + MR + V SVL AC L+P + G+ +H +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC-LLPGDLLERGKPLHAY 472
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+V GF D V N+LI MY + G L ++ LF+ + +++++W+ M+ + +G +E
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L L+ MR GV + + + A+LA L+
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+ Y PE + IY MR + + V+ +C L+ LG ++ VV
Sbjct: 111 WTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVV 170
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G + V N+LI M G G++ YA +FD+M +D +SW+++ +Y +NG ++E+
Sbjct: 171 KSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFR 230
Query: 213 LLKDMR 218
+ MR
Sbjct: 231 IFSLMR 236
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ + +Y +N E + +I++ MRR EV+S V ++L + + G +H VV
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF V VCN L+ MY G A +F +M KD++SW++++ S+ +G +AL
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 213 LLKDMRVAG 221
LL M +G
Sbjct: 332 LLCSMISSG 340
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L+ S++ + +A+ + M + V+ S L AC F+ G +H VV
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 372
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+G + + NAL+ MYG+ G + +R++ +M +DVV+W+ +I Y + D+AL
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 432
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ MRV GV + I ++S++
Sbjct: 433 AFQTMRVEGVSSNYITVVSVL 453
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
E +K+ + MR +D F L A + + + G+++H VK GF D F+ NA
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
MY + G +G ++ V + + SW+ +I + GR+G +E +M G+KP
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 227 IAMISIV 233
+ +S++
Sbjct: 650 VTFVSLL 656
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
++ +Y ++ E A+ +++ M + + + +L + + + + G+ +H V+K+G
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
+ V V NAL+ MY + GS+ AR+ F M +D+V+W+TMI +GL EAL+
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 216 DMRVAGVKPSEIAMISIVHVLAELA 240
M G P+ I I ++ + +
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIG 453
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++S ++ Y++ + + + D ++ S L+ S + L +VH
Sbjct: 203 SVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+V+ GF+ +V C ALI MYG+ G + YA+++FD +++ +T++ +Y ++ +EA
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L+L M V P+E +++ +AEL+ LK
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLK 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 131 VLKACSLIPSFQLGEEVHDFVV---KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV 187
+LK C+ ++GE +H ++ ++ D + N+LI +Y + AR+LFD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 188 GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG-VKPSE 226
++VVSW M++ Y +G E L L K M +G +P+E
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNE 136
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ L+ Y++ ++++ M E D F V + L AC+ + + G+ +H+FV
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 153 KNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K + DVFV AL+ MY + G + A ++F K+ ++V SW+ +I Y G +A+
Sbjct: 246 KKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAM 305
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLA 237
L+ + R G+KP + ++ ++ A
Sbjct: 306 TCLERLEREDGIKPDSVVLLGVLAACA 332
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTE-------VDSFIVPSVLKACSLIPSFQLG 144
+Y +I +++ P ++ + M + + E F++ + LKAC F +G
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF----FSVG 135
Query: 145 EEVHDFVVKNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
+++H +VVKNG F D V ++ +Y E L AR++FD++ DVV W ++ Y R
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
GL E L++ ++M V G++P E ++ + + A++ L
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGAL 234
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 86/161 (53%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
G A ++ L++ Y N + A++ +M++ D + +VL C+ + + +
Sbjct: 377 GSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
G+E+H + +KN F +V + +L++MY + G Y +LFD++ ++V +W+ MI Y
Sbjct: 437 GKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVE 496
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
N L +++ + M ++ +P + M ++ V ++L LKL
Sbjct: 497 NCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
++ + +T MR +++ + + +V K+ + + + G + H +KNG VF+ +L
Sbjct: 196 QDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSL 255
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPS 225
+ MY + G +G AR++FD++V +D+V W MI N EAL L + M + P+
Sbjct: 256 VDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPN 315
Query: 226 EIAMISIVHVLAELADLKL 244
+ + +I+ VL ++ LKL
Sbjct: 316 SVILTTILPVLGDVKALKL 334
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 75/146 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y++N ++++ M + DS + VL CS + + +LG+E+H ++
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL 546
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K F FV +I MYG+ G L A FD + K ++W+ +I +YG N L +A++
Sbjct: 547 KKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAIN 606
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAE 238
+ M G P+ +++ + ++
Sbjct: 607 CFEQMVSRGFTPNTFTFTAVLSICSQ 632
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKN-GFHGDVFVCNALIMMYGEGGSLGYARQL 182
+S I+ ++L + + +LG+EVH V+K+ + FV + LI +Y + G + R++
Sbjct: 315 NSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRV 374
Query: 183 FDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
F ++ +SW+ ++ Y NG D+AL + M+ G +P + + +++ V AEL +
Sbjct: 375 FYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAI 434
Query: 243 K 243
K
Sbjct: 435 K 435
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Query: 97 ITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGF 156
I + + N E A+ I Y+ + V++ ++L+AC S G++VH + NG
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 157 HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG--LLDEALDLL 214
+ F+ L+ MY GS+ A+++FD+ +V SW+ ++R +G + L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 215 KDMRVAGV 222
+MR GV
Sbjct: 203 TEMRELGV 210
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 78/151 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y +++ +K++ M + D F + +V K C + + G++VH + +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K+G+ D++V + ++ MY + G + A+ FD + D V+W+TMI NG + A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ MR+ GV P E + ++ + L L+
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 97 ITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGF 156
++ Y+ + +K + M +D E D +L + S LG++VH +K G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 157 HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKD 216
+ V N+LI MY + G+AR +FD M +D++SW+++I +NGL EA+ L
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 217 MRVAGVKPSEIAMISIVHVLAELAD 241
+ G+KP + M S++ + L +
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPE 431
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 57 LDQTQQIHGHFIKTCSSCSFQLPILALGYY----SSGAAIYSF-------------LITS 99
++Q +Q+H + IK+ + L Y AA ++F +I+
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 100 YIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGD 159
I+N E A +++ MR D F + ++ KA S + + + G ++H +K D
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 160 VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
FV +L+ MY + GS+ A LF ++ ++ +W+ M+ ++G E L L K M+
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 220 AGVKPSEIAMISIV 233
G+KP ++ I ++
Sbjct: 713 LGIKPDKVTFIGVL 726
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
+ A ++ +R+ + +LK C E H + K G GD FV AL
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+ +Y + G + + LF++M +DVV W+ M+++Y G +EA+DL +G+ P+E
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 227 IAMISIVHVLAELAD 241
I + + + + +D
Sbjct: 247 ITLRLLARISGDDSD 261
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 143 LGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
LG+ H ++ + + F+ N LI MY + GSL YAR++FDKM +D+VSW++++ +Y
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 203 RN 204
++
Sbjct: 117 QS 118
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++LI + ++ P N++ Y M + + D F LK+C I S E+H V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+++GF D V +L+ Y GS+ A ++FD+M +D+VSW+ MI + GL ++AL
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+ K M GV +++++ A ++ L +
Sbjct: 194 SMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + A+ +Y M DS+ + ++L +C+ + + +G +H
Sbjct: 176 WNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
VFV NALI MY + GSL A +F+ M +DV++W++MI YG +G EA+
Sbjct: 236 DIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAIS 295
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M +GV+P+ I + ++
Sbjct: 296 FFRKMVASGVRPNAITFLGLL 316
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ LI Y N A++ + M D++ D + SVL AC + +LG+ + D++
Sbjct: 365 WNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
KN + +LI MY GG+L A+++FD+M +DVVS++T+ ++ NG E L
Sbjct: 425 RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETL 484
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+LL M+ G++P + S++
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVL 506
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
G ++ NA+I Y G + ARQLFD M ++VVSW+++I Y NG A++
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 215 KDMRVAG-VKPSEIAMISIVHVLAELADLKL 244
+DM G KP E+ MIS++ +ADL+L
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 76 FQLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLK-- 133
FQ + LG++ + + ++ Y+K+ E+A K++ + + + ++ K
Sbjct: 123 FQALVEKLGFFKD-PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWG 181
Query: 134 ----ACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
AC L D + +N DV +I + + L AR+ FD+M K
Sbjct: 182 NKEEACKLF----------DMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEK 227
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
VVSW+ M+ Y +NG ++AL L DM GV+P+E + ++ + AD L
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 5/155 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP---SFQLGEEVHD 149
++ +I + +NN +A + + M + TE + + +VL C+ + + + G ++H
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 150 FVVKNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
+VV+ + VFVCN+L+ Y G + A LF +M KD+VSW+ +I Y N
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 209 EALDLLKDMRVAG-VKPSEIAMISIVHVLAELADL 242
+A L ++ G V P + +ISI+ V A+L DL
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDL 346
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S ++ Y ++ CP A+ ++ ++ ++ + ++L C+ + S L + H +++
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYII 595
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ G GD+ + L+ +Y + GSL +A +F +D+V ++ M+ Y +G EAL
Sbjct: 596 RGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M + +KP + + +++
Sbjct: 655 IYSHMTESNIKPDHVFITTML 675
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVF---VCNALIMMYGEGGSLGYA 179
+DS + S+LK C + +EVH + VK G D + NAL+ Y + G++ YA
Sbjct: 430 LDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYA 489
Query: 180 RQ--------------------------------LFDKMVGKDVVSWSTMIRSYGRNGLL 207
+ LF +M D+ +WS M+R Y +
Sbjct: 490 HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCP 549
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
+EA+ + ++++ G++P+ + +++++ V A+LA L L
Sbjct: 550 NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL 586
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 104 NCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFV 162
+C ++ + M D + S VL C + G+ +H +++K G D V
Sbjct: 100 SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLV 159
Query: 163 CNALIMMYGEGGSL-GYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAG 221
NAL+ MY + G + A FD + KDVVSW+ +I + N ++ +A M
Sbjct: 160 GNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 222 VKPSEIAMISIVHVLAEL 239
+P+ + +++ V A +
Sbjct: 220 TEPNYATIANVLPVCASM 237
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIY-TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y N A +++ + + D DS + S+L C+ + G+E+H ++
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 152 VKNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
+++ + D V NALI Y G A F M KD++SW+ ++ ++
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
A+ M+ D+F + L C F LG ++ VVK G D+ V N+ I
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD-EALDLLKDMRVAGVKPSEI 227
MY GS AR++FD+M KD++SW++++ + G EA+ + +DM GV+ +
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 228 AMISIVHVLAELADLKL 244
+ S++ DLKL
Sbjct: 278 SFTSVITTCCHETDLKL 294
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
AV I+ M R E+D SV+ C +L ++H +K G+ + V N L+
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
Y + G L + +F +M ++VVSW+TMI S D+A+ + +MR GV P+E+
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVT 374
Query: 229 MISIVHVL 236
+ +++ +
Sbjct: 375 FVGLINAV 382
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 15/204 (7%)
Query: 54 QLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGA---AIYSFL----------ITSY 100
+ +L +QIHG IK ++ + + YS A+ S T+
Sbjct: 289 ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM 348
Query: 101 IKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV 160
I +N ++AV I+ MR + ++ A + G ++H +K GF +
Sbjct: 349 ISSN-KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
V N+ I +Y + +L A++ F+ + ++++SW+ MI + +NG EAL + A
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AA 466
Query: 221 GVKPSEIAMISIVHVLAELADLKL 244
P+E S+++ +A D+ +
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISV 490
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 97 ITSYIKNNCPENAVKIYT------YMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
I+ ++ N P A+ I+ Y R +D + LKAC + G ++H F
Sbjct: 47 ISESLRRNSPARALSIFKENLQLGYFGR---HMDEVTLCLALKACR--GDLKRGCQIHGF 101
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+GF V V NA++ MY + G A +F+ +V DVVSW+T++ + N + A
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---A 158
Query: 211 LDLLKDMRVAGV 222
L+ + M+ AGV
Sbjct: 159 LNFVVRMKSAGV 170
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIP--SFQLGEEVHDF 150
++ +I+ + +N A+K++ +T + + SVL A + S + G+ H
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++K G + V +AL+ MY + G++ + ++F++M K+ W+++I +Y +G +
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
++L M V P + +S++
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVL 582
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I + ++ ++ ++ M R + D F +P +L+ACS + G+ +H
Sbjct: 101 WNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLC 160
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K GF +FV +AL++MY + G L +AR+LFD M +D V ++ M Y + G L
Sbjct: 161 LKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGL 220
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ ++M +G + M+S++ +L LK
Sbjct: 221 AMFREMGYSGFALDSVVMVSLLMACGQLGALK 252
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 76/148 (51%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
+ +Y+ + Y++ + ++ M + +DS ++ S+L AC + + + G+ VH
Sbjct: 200 SVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHG 259
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ ++ + + NA+ MY + L YA +F M +DV+SWS++I YG +G +
Sbjct: 260 WCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVM 319
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLA 237
+ L +M G++P+ + + ++ A
Sbjct: 320 SFKLFDEMLKEGIEPNAVTFLGVLSACA 347
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHD 149
+++ L++SY+ N + A + M D F S+L AC + + G+++H
Sbjct: 210 LWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQIHA 265
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+ K + D+ V AL+ MY + L AR+ F+ MV ++VVSW+ MI + +NG E
Sbjct: 266 ILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGRE 325
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
A+ L M + ++P E+ S++ A+ +
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCAKFS 356
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 113 YTYMRR---TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMM 169
+ Y+ R TD +D +++ C+ + + G ++H +VK G F +L+
Sbjct: 127 FCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHF 186
Query: 170 YGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
YG+ G + AR++F+ ++ +D+V W+ ++ SY NG++DEA LLK M
Sbjct: 187 YGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I + +N A++++ M + + D SVL +C+ + ++V V
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVT 369
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G + V N+LI Y G+L A F + D+VSW+++I + +G +E+L
Sbjct: 370 KKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQ 429
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ + M + ++P +I + ++
Sbjct: 430 MFESM-LQKLQPDKITFLEVL 449
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
I++ LI Y +N ++A+ + M+ E D+ V S+L AC+ +G EVH +
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 300
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
G + FV NALI MY + G L A +F+ + + V ++MI +G EAL
Sbjct: 301 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEAL 360
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
++ M +KP EI I+++
Sbjct: 361 EMFSTMESLDLKPDEITFIAVL 382
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 94 SFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACS-LIPSFQLGEEVHDFVV 152
S LI ++I P A+ +Y +RR + VP +L+AC+ ++P LG+ +H +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESI 73
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G DV V ++LI MYG+ G + AR++FD+M ++V +W+ MI Y NG A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 213 LLKDMRVAGVKPSEIAMI 230
L +++ V + I MI
Sbjct: 134 LFEEISVCRNTVTWIEMI 151
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
+ FV + ++ Y G + AR +F ++ +D+V W+T+I Y +NG D+A+D +M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 219 VAGVKPSEIAMISIVHVLAELADL 242
G +P + + SI+ A+ L
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRL 290
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 108 NAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALI 167
A++ Y M + + + +++ ACS I +F+L +E+H + +N + + L+
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
YG GS+ Y + +FD M +DVV+WS++I +Y +G + AL ++M +A V P +I
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 228 AMISIVHVL--AELADLKL 244
A ++++ A LAD L
Sbjct: 285 AFLNVLKACSHAGLADEAL 303
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 4/146 (2%)
Query: 97 ITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
++SY E A+ ++ M + +D+ + LK+C+ LG VH VK+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
F + FV AL+ MYG+ S+ +AR+LFD++ ++ V W+ MI Y G + EA++L +
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 216 DMRVAGVKPSEIAMISIVHVLAELAD 241
M V P+E + +I+ L D
Sbjct: 139 AM---DVMPNESSFNAIIKGLVGTED 161
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ L+ Y++ ++++ M E D F V + L AC+ + + G+ +H+FV
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 153 KNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K + DVFV AL+ MY + G + A ++F+K+ ++V SW+ +I Y G +A
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 212 DLLKDM-RVAGVKPSEIAMISIVHVLA 237
L + R G+KP + ++ ++ A
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACA 332
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTE-------VDSFIVPSVLKACSLIPSFQLG 144
+Y +I +++ P ++ + M + + E F++ + LKAC F +G
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF----FSVG 135
Query: 145 EEVHDFVVKNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR 203
+++H +VVKNG F D V ++ +Y E L AR++FD++ DVV W ++ Y R
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 204 NGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
GL E L++ K+M V G++P E ++ + + A++ L
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGAL 234
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I + + E AV+ + M R D F + SV+ ACS + + GE H
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ GF + VC AL+ MYG+ G A +F D+ W++M+ +Y ++G++++AL
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+ + G P + +S++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLL 611
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 93 YSFLITSYIKN-NCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ L ++Y +N + A + T+M + +S S+++ C+++ +G ++ +
Sbjct: 166 YNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQI 225
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K G+ +V V +++ MY G L AR++FD + +D V+W+TMI +N +++ L
Sbjct: 226 IKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGL 285
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
++M ++GV P++ +++ ++L L
Sbjct: 286 MFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ +I +KN+ E+ + + M + + F VL CS + S+ LG+ +H
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
++ + D+ + NAL+ MY G + A +F ++ ++VSW+++I NG ++
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQ 384
Query: 210 ALDLLKD-MRVAGVKPSEIAMISIVHVLAE 238
A+ + + +R++ +P E + + AE
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 122 EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV---FVCNALIMMYGEGGSLGY 178
E+ S +V + + C I + ++H V+ G + N LI MY GSL
Sbjct: 92 EIASSVV-ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ 150
Query: 179 ARQLFDKMVGKDVVSWSTMIRSYGRN-GLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA 237
AR++FDKM ++VVS++ + +Y RN A L M VKP+ S+V V A
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
Query: 238 ELADL 242
L D+
Sbjct: 211 VLEDV 215
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ +N E A+ +Y + R T D + + + A + F G+ +H V
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G+ VFV L+ MY + A+++FD M +DVV W+ MI + R G + A+
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+M + ++ S++ +++A L+
Sbjct: 489 QFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
LI+ I+N N + + M R V ++ S L CS +G+++H ++NG
Sbjct: 257 LISGCIRN---RNYKEAFLLMSRQRPNVR--VLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
F D +CN L+ MYG+ G + AR +F + K VVSW++MI +Y NG +AL++ +
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 216 DM--RVAGVKPSEIAMISIVHVLAELADLK 243
+M +GV P+ + + ++ A +K
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVK 401
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 106 PENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNA 165
P + + ++ + R ++ S VL ACSL+ + G +VH ++K G A
Sbjct: 65 PNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTA 124
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
LI MY + G L + ++F+ + KD+VSW+ ++ + RNG EAL + M V+ S
Sbjct: 125 LIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 226 EIAMISIVHVLAELADLK 243
E + S+V A L L+
Sbjct: 185 EFTLSSVVKTCASLKILQ 202
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 2/127 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++ +++N + A+ ++ M R E+ F + SV+K C+ + Q G++VH VV
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGLLDEAL 211
G V + A+I Y G + A ++++ + V D V +++I RN EA
Sbjct: 213 VTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 212 DLLKDMR 218
L+ R
Sbjct: 272 LLMSRQR 278
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I ++K E A+ + M+ + + D + + L AC+ + + G VH +V+
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL 233
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
F +V V N+LI +Y G + +ARQ+F M + VVSW+++I + NG E+L
Sbjct: 234 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLV 293
Query: 213 LLKDMRVAGVKPSEI----AMISIVHV 235
+ M+ G KP + A+ + HV
Sbjct: 294 YFRKMQEKGFKPDAVTFTGALTACSHV 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 48/79 (60%)
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
N +I Y G + A ++FDKM +D++SW+ MI + + G +EAL ++M+++GVK
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 224 PSEIAMISIVHVLAELADL 242
P +A+I+ ++ L L
Sbjct: 204 PDYVAIIAALNACTNLGAL 222
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+S LI Y +N P A K+++ M + + D FI+ ++ ACS + F+L E+V ++
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 153 K--NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ N F +V ALI M + G + A +LF++M +D+VS+ +M+ +G EA
Sbjct: 332 QRMNKFSSH-YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAE 238
+ L + M G+ P E+A I+ V +
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTD-TEVDSFIVPSVLKACSLIPSFQLGE 145
S G +++ LI Y V I M RT D + P V+K CS ++G
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNG 205
VH V++ GF DV V + + YG+ L AR++F +M ++ VSW+ ++ +Y ++G
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSG 190
Query: 206 LLDEA 210
L+EA
Sbjct: 191 ELEEA 195
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A ++ L+ +Y+K+ E A ++ M + + +V ++K+ L+ + +L +E+
Sbjct: 176 AVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK 235
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
D+ ++I Y +GG + AR LF++ G DV +WS +I Y +NG +E
Sbjct: 236 --------RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNE 287
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
A + +M VKP E M+ ++ +++ +L
Sbjct: 288 AFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFEL 322
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ +I+ + N P ++ ++ + ++ + D++ + ++L C S LG + H +
Sbjct: 455 WNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V+++G + + NALI MY + G++ + ++F++M KDVVSW+++I +Y R+G + A
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
++ K M+ G + A S V
Sbjct: 575 VNTYKTMQDEGKVIPDAATFSAV 597
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
SV+ +CS +G +VH +K G+ V NA + MY G A ++F+ + K
Sbjct: 296 SVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEK 352
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
D+V+W+TMI SY + L A+ + K M + GVKP E S++ +L L++
Sbjct: 353 DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM 407
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 61 QQIHGHFIKTCSSCSFQLPILALGYYSS----GAA-------------IYSFLITSYIKN 103
Q+HG IKT + + YSS GAA ++ +I+SY +
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 104 NCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVC 163
++A+ +Y M + D F S+L A SL + E V ++K G + +
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLL-ATSL--DLDVLEMVQACIIKFGLSSKIEIS 424
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVK 223
NALI Y + G + A LF++ + K+++SW+ +I + NG E L+ R + +
Sbjct: 425 NALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE-----RFSCLL 479
Query: 224 PSEIAMISIVHVLAEL 239
SE+ ++ + L+ L
Sbjct: 480 ESEVRILPDAYTLSTL 495
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 6/146 (4%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
AI++ +IT ++ E +V+++ M + D F ++L C S G++VH
Sbjct: 156 AIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSL 214
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK--MVGKDVVSWSTMIRSYGRNGL-L 207
V+K GF V NALI MY + A +F++ + +D V+++ +I G G
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVID--GLAGFKR 272
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIV 233
DE+L + + M A ++P+++ +S++
Sbjct: 273 DESLLVFRKMLEASLRPTDLTFVSVM 298
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 19/182 (10%)
Query: 55 LNLDQTQQIHGH---------------FIKTCSSCSFQLPILALGYYSSGAAIYSFLITS 99
+NL+Q +QIHGH I+T + + A FL T+
Sbjct: 60 INLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTA 119
Query: 100 YIKNNCPE----NAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
I+ E A+ +Y MR+ + SF ++LKAC + LG + H +
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
V+V N +I MY + S+ AR++FD+M +DV+SW+ +I +Y R G ++ A +L +
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 216 DM 217
+
Sbjct: 240 SL 241
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++T + +N P+ A++ + M ++ D V + AC+ + + + +
Sbjct: 249 WTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQ 308
Query: 153 KNGFH--GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K+G+ V + +ALI MY + G++ A +F M K+V ++S+MI +G EA
Sbjct: 309 KSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEA 368
Query: 211 LDLLKDMRV-AGVKPSEIAMI 230
L L M +KP+ + +
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFV 389
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 17/190 (8%)
Query: 56 NLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAI-YSFLITSYIKNNCPENAVKIYT 114
N+ +T IHG C S + I ++ ++T Y +NN ++A KI+
Sbjct: 172 NIARTSMIHG----LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 115 YM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV-VKNGFHGDVFVCNALIMMYGE 172
M +T+ S ++ V + EE+ + + VK V CNA+I G+
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNG-----RIEDAEELFEVMPVK-----PVIACNAMISGLGQ 277
Query: 173 GGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
G + AR++FD M ++ SW T+I+ + RNG EALDL M+ GV+P+ +ISI
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 233 VHVLAELADL 242
+ V A LA L
Sbjct: 338 LSVCASLASL 347
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A + +I + +N A+ ++ M++ + S+L C+ + S G++VH
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+V+ F DV+V + L+ MY + G L ++ +FD+ KD++ W+++I Y +GL +EA
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEA 416
Query: 211 LDLLKDMRVAG-VKPSEIAMIS 231
L + +M ++G KP+E+ ++
Sbjct: 417 LKVFCEMPLSGSTKPNEVTFVA 438
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ + + + +K+Y+ MR++ ++ + + ++L AC+ + G VH +
Sbjct: 189 WTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL 248
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G + + N+LI MY + G L A ++FD+ KDVVSW++MI Y ++GL +A++
Sbjct: 249 HMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIE 308
Query: 213 LLKDMR-VAGVKPSEIAMISIV 233
L + M +G KP I + ++
Sbjct: 309 LFELMMPKSGTKPDAITYLGVL 330
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 66/118 (55%)
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGS 175
++R D++ + S +++C L F+ G H +K GF DV++ ++L+++Y + G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 176 LGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
+ A ++F++M ++VVSW+ MI + + +D L L MR + P++ +++
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 77/145 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y + E A+ + MR + +D F + +++ + + +L ++ H ++
Sbjct: 293 WNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+NGF ++ AL+ Y + G + AR +FDK+ K+++SW+ ++ Y +G +A+
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
L + M A V P+ + ++++ A
Sbjct: 413 LFEKMIAANVAPNHVTFLAVLSACA 437
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 119 TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGY 178
+D E +F V +L+A + + S +G+++H +K G + FV LI MY + G +
Sbjct: 220 SDCETHTFAV--MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED 277
Query: 179 ARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
AR F+ M K V+W+ +I Y +G +EAL LL DMR +GV + + ++ + +
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 239 LADLKL 244
LA L+L
Sbjct: 338 LAKLEL 343
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
+ +++ L+ Y + E+A+ +++ MR V + SVL A ++ G +H
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
VK G D+ V NALI MYG+ L A +F+ M +D+ +W++++ + G D
Sbjct: 287 LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDG 346
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L L + M +G++P + + +++ LA L+
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLR 380
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGF----HGDVFV 162
+ + ++ M + D + +VL C + S + G E+H +++ +G + F+
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 163 CNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGV 222
N+L+ MY + G L AR +FD M KD SW+ MI YG + ALD+ M AGV
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 223 KPSEIAMISIVHVLA 237
KP EI + ++ +
Sbjct: 465 KPDEITFVGLLQACS 479
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 19/235 (8%)
Query: 26 SNQPQSPTLKFTHFKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKTC-------------- 71
S Q + ++ H Q+ + + QQIHG ++
Sbjct: 45 SGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVN 104
Query: 72 --SSCSF-QLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIV 128
+ C + +L G Y+ LI+ ++ N P +A++ Y MR D +
Sbjct: 105 MYAKCGLMRRAVLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTF 164
Query: 129 PSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG 188
PS+LK + + ++VH K GF D +V + L+ Y + S+ A+++FD++
Sbjct: 165 PSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPD 223
Query: 189 K-DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ D V W+ ++ Y + ++AL + MR GV S + S++ D+
Sbjct: 224 RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%)
Query: 94 SFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVK 153
S LIT Y + + A+ ++ +R + + D +V VL +C+ + G+EVH +V++
Sbjct: 277 SSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR 336
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
G D+ VC+ALI MY + G L A LF + K++VS++++I G +G A +
Sbjct: 337 LGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK 396
Query: 214 LKDMRVAGVKPSEIAMISIV 233
++ G+ P EI +++
Sbjct: 397 FTEILEMGLIPDEITFSALL 416
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL-GEEVHD 149
A+++ +I Y + + ++ M+ + + + + + L + + PS L VH
Sbjct: 173 ALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVA-LTSGLIDPSLLLVAWSVHA 231
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
F +K +V AL+ MY + A +F+ + D+V+ S++I Y R G E
Sbjct: 232 FCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKE 291
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
AL L ++R++G KP + + ++ AEL+D
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 68/141 (48%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I +Y K + + +++ + R+DT D+F + + S + +H
Sbjct: 73 LWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIA 132
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ +G D +A++ Y + G + A +LF + D+ W+ MI YG G D+ +
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGI 192
Query: 212 DLLKDMRVAGVKPSEIAMISI 232
+L M+ G +P+ M+++
Sbjct: 193 NLFNLMQHRGHQPNCYTMVAL 213
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 59 QTQQIHGHFIKTCSS-------------CSFQLPILALGYY-----SSGAAIYSFLITSY 100
Q + HG I+ C S C F+L +A + ++ ++ Y
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 101 IKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDV 160
K C ++++ ++ E+DS SV+ +CS I + LG+ +H +VVK +
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 161 FVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA 220
V N+LI +YG+ G L A ++F + +V++W+ MI SY ++A+ L M
Sbjct: 469 SVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE 527
Query: 221 GVKPSEIAMISIVHVLAELADLK 243
KPS I +++++ L+
Sbjct: 528 NFKPSSITLVTLLMACVNTGSLE 550
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I SY+ E A+ ++ M + + S + ++L AC S + G+ +H ++
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ ++ + ALI MY + G L +R+LFD KD V W+ MI YG +G ++ A+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 213 LLKDMRVAGVKPS 225
L M + VKP+
Sbjct: 621 LFDQMEESDVKPT 633
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDS---FIVPSVLKACSLIPSFQLGEEVHD 149
++ +I+ +++N E + M ++VD + +ACS + + + G +H
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
F VKNG FV +++ Y + G+ A F ++ +D+ SW+++I S R+G ++E
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
+ D+ +M+ G+ P + + +++ L ++
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKM 344
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I ++ N ++ + M + D F P V+ AC+ + F +G VH V
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 152 VKNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+K+G F + V + + Y + G L A +FD+M +DVV+W+ +I + +NG +
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 211 LDLLKDMRVAG 221
L L M AG
Sbjct: 212 LGYLCKMHSAG 222
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I S ++ E + ++ M+ D ++ ++ + G+ H FV+
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEAL 211
++ F D VCN+L+ MY + L A +LF ++ + + +W+TM++ YG+ + +
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+L + ++ G++ + S++
Sbjct: 419 ELFRKIQNLGIEIDSASATSVI 440
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A+++ L++ Y N E+A+ I++ M R + S L +CS + + G+E+H
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
VK G D FV N+L++MY + G++ A +F K+ K +VSW+++I ++G A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
+ M +P EI ++
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLL 434
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +N A+ ++ M R + S V+ AC+ P+F +G +VH ++
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K GF + +V +LI Y +G +R++FD+ V + V W+ ++ Y N ++AL
Sbjct: 253 KLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALS 312
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ M + P++ S ++ + L L
Sbjct: 313 IFSGMLRNSILPNQSTFASGLNSCSALGTL 342
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 64 HGHFI--KTCSSCSFQLPILALGYY------SSGAAIYSFLITSYIKNNCPENAVKIYTY 115
H HF+ K C+ +L L+ + +Y+ ++T+Y ++ P +A +++
Sbjct: 54 HSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSF 112
Query: 116 MR----RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYG 171
R R+ + FI P VLK+ + S VH + K+GFH V V AL+ Y
Sbjct: 113 FRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYA 172
Query: 172 EGGS-LGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
S + ARQLFD+M ++VVSW+ M+ Y R+G + A+ L +DM
Sbjct: 173 SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM 219
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 128 VPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV 187
V VL AC+ + QL + +H F + DVFV N+L+ +YG+ G+L A +F
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 188 GKDVVSWSTMIRSYGRNGLLDEALDLLKDM---RVAGVKPSEIAMISIV 233
K + +W++MI + +G +EA+ + ++M + +KP I I ++
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI Y +NN A++++ MR ++ + +V+ ACS + + +
Sbjct: 141 YTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAI 200
Query: 153 KNGFHGDVFVCNALIMMY-------------------------------GEGGSLGYARQ 181
K G VFV L+ MY + G + A +
Sbjct: 201 KLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEE 260
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
LFD++ KD+VSW TMI R LDEAL +M G+KPSE+ M+ ++ A
Sbjct: 261 LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASAR 317
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 31/144 (21%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSL------------- 176
S L +C+ G ++H V+K+G + ++CN+++ MY + L
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 177 ----------GYAR--------QLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR 218
GY R +LFD M + VS++T+I+ Y +N EA++L ++MR
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 219 VAGVKPSEIAMISIVHVLAELADL 242
G+ +E+ + +++ + L +
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGI 189
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 32/183 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
+ +I ++ N + A+ YT M R + ++ +L A + G ++H +V
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIV 332
Query: 153 KNGFHGDVFV-------------------------------CNALIMMYGEGGSLGYARQ 181
K GF F+ NALI + + G + AR+
Sbjct: 333 KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQARE 392
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM-RVAGVKPSEIAMISIVHVLAELA 240
+FD+ KD+ SW+ MI Y ++ AL L ++M + VKP I M+S+ ++ L
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 241 DLK 243
L+
Sbjct: 453 SLE 455
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYM-RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ Y ++ P+ A+ ++ M + + D+ + SV A S + S + G+ HD++
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLF--DKMVGKDVVS-WSTMIRSYGRNGLLD 208
+ + + A+I MY + GS+ A +F K + +S W+ +I +G
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 209 EALDLLKDMRVAGVKPSEIAMISIV 233
ALDL D++ +KP+ I + ++
Sbjct: 525 LALDLYSDLQSLPIKPNSITFVGVL 549
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 72/131 (54%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI SY+ + ++ ++T+M + + ++ PS++KA S G +H
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+K GF D FV + + YGE G L +R++FD ++ VV+ ++++ + GRNG +D A
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 212 DLLKDMRVAGV 222
+ + M V V
Sbjct: 173 EYFQRMPVTDV 183
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVP------SVLKACSLIP--SFQLG 144
++ +I + K A+ ++ M + + V I P SVL +C+ +LG
Sbjct: 186 WTTVINGFSKKGLHAKALMVFGEMIQNERAV---ITPNEATFVSVLSSCANFDQGGIRLG 242
Query: 145 EEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRN 204
+++H +V+ + AL+ MYG+ G L A +FD++ K V +W+ +I + N
Sbjct: 243 KQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASN 302
Query: 205 GLLDEALDLLKDMRVAGVKPSEIAMISIVHVLA--ELADLKL 244
G +AL++ + M+ + V P+ I +++I+ A +L DL +
Sbjct: 303 GRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 65 GHFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNC----PENAVKIYTYMRRT- 119
GHF+K + + A F + S I+ +C PE + Y + +
Sbjct: 42 GHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSG 101
Query: 120 -DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLG- 177
D + D++ V +++AC+ + + G +VH ++ GF D V LI +Y E G L
Sbjct: 102 NDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDS 161
Query: 178 ------------------------------YARQLFDKMVGKDVVSWSTMIRSYGRNGLL 207
+AR+LF+ M +D ++W+ MI Y + G
Sbjct: 162 CHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGES 221
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
EAL++ M++ GVK + +AMIS++ +L L
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 71/141 (50%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ Y + A+ ++ M+ +V+ + SVL AC+ + + G H ++
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+N V + L+ +Y + G + A ++F M K+V +WS+ + NG ++ L+
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L M+ GV P+ + +S++
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVL 348
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
+ + S++ AC+ I + G+++H + + GF+ +V + NALI MY + G++ ++++F
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVF 371
Query: 184 DKMVG-KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
++V +++VSW++M+ YG +G EA++L M +G++P I ++++
Sbjct: 372 GEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 4/193 (2%)
Query: 53 VQLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYS---SGAAIYSFLITSYIKNNCPENA 109
V+L ++ + + + ++CS + L + ++ LIT +
Sbjct: 138 VKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGG 197
Query: 110 VKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMM 169
+K+Y M + EV + + ++A + I S G+++H V+K GF ++ V N+++ +
Sbjct: 198 LKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDL 257
Query: 170 YGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAM 229
Y G L A+ F +M KD+++W+T+I R+ EAL + + G P+
Sbjct: 258 YCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTF 316
Query: 230 ISIVHVLAELADL 242
S+V A +A L
Sbjct: 317 TSLVAACANIAAL 329
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +IT Y +N A + + M + T + F + SVLK+C + G VH VV
Sbjct: 79 WTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV 138
Query: 153 KNGFHGDVFVCNALIMMYGEGG-SLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G G ++V NA++ MY ++ A +F + K+ V+W+T+I + G L
Sbjct: 139 KLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 212 DLLKDM 217
+ K M
Sbjct: 199 KMYKQM 204
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 166 LIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
LI+ Y E G + AR LFD+M +DVV+W+ MI Y + A + +M G P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 226 EIAMISIV 233
E + S++
Sbjct: 111 EFTLSSVL 118
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y + + P+ A+ +++ M D + + + ++L A + ++ VH +V
Sbjct: 223 WTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYV 282
Query: 152 VKNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVG--KDVVSWSTMIRSYGRNGLLD 208
K GF D+ V N+LI Y + G + A + F ++ K++VSW+TMI ++ +G+
Sbjct: 283 GKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGK 342
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVH 234
EA+ + KDM G+KP+ + MIS+++
Sbjct: 343 EAVSMFKDMERLGLKPNRVTMISVLN 368
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 104/249 (41%), Gaps = 51/249 (20%)
Query: 39 FKAKDTQPLQQKPNVQLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIYSFLIT 98
F + Q L QK + NL Q+H HF ++ F L L S +++ L+
Sbjct: 34 FSIQHFQSLMQK--YESNLKIIHQLHSHF----TTSGFLL--LHQKQNSGKLFLFNPLLR 85
Query: 99 SYIKNNCPENAVKIYTYMRRTD---------TEVDSFIVPSVLKACS--LIPSFQLGEEV 147
Y P +A +Y ++R DSF +LKA S PS LG +
Sbjct: 86 CYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGL 145
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFD----------------------- 184
H +K GF V+V AL+ MY GG++ A ++FD
Sbjct: 146 HGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDF 205
Query: 185 --------KMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA-GVKPSEIAMISIVHV 235
KM + VVSW+T+I Y R EA+ L M +KP+EI +++I+
Sbjct: 206 EKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPA 265
Query: 236 LAELADLKL 244
+ L DLK+
Sbjct: 266 VWNLGDLKM 274
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Query: 131 VLKACSLIPSFQLGEEVHDFVVKNGFHG-DVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
VL AC+ + +F G+ VH + G++ DV V NALI MYG+ G++ A ++F + +
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
D++SW+TMI +G EAL+L +M+ +G+ P ++ + ++
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM--V 187
S+L ACS I + + G+E+H V+K D+FV +LI MY + G +AR++FD+
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Query: 188 GKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
KD V W+ MI YG++G + A+++ + +R V+PS
Sbjct: 433 PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPS 470
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
G A + ++ ++N +A +++ R + + ++S V SVL C I G ++H
Sbjct: 96 GIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLH 152
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
+K+GF +V+V +L+ MY G A ++F+K+ K VV+++ I NG+++
Sbjct: 153 CLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMN 212
Query: 209 EALDLLKDMR-VAGVKPSEIAMISIVHVLAELADLK 243
+ MR + +P+++ ++ + A L +L+
Sbjct: 213 LVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ 248
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 3/120 (2%)
Query: 124 DSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLF 183
+ F P +LK+C+ + G +H VVK GF DVF AL+ MY + + A ++
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 184 DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
D+M + + S + + NG +A + D RV+G S + +++ VL D++
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSG---SGMNSVTVASVLGGCGDIE 146
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRR-TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ I+ ++N ++ MR+ + E + + + AC+ + + Q G ++H V
Sbjct: 198 YNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEA 210
+K F + V ALI MY + A +F ++ ++++SW+++I NG + A
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 211 LDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
++L + + G+KP S++ ++L +
Sbjct: 318 VELFEKLDSEGLKPDSATWNSLISGFSQLGKV 349
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI +N CPE + +Y M+ + + +VL +CS + G+++H +
Sbjct: 160 WNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G V V ++LI MY + G LG A + F + +D V WS+MI +YG +G DEA++
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 213 LLKDM-RVAGVKPSEIAMISIVHV 235
L M ++ +E+A +++++
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYA 303
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 76/148 (51%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I I+ E + ++ M D + + SV + + S +G+++H + +
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G D+ V ++L MY G L + M +++V+W+T+I +NG + L
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELA 240
L K M+++G +P++I ++++ ++LA
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLA 206
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 68/126 (53%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+++ +I Y P ++ ++ M+ D + +LK+CS + + G+ VH +
Sbjct: 69 VFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEL 128
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
++ GFH + ++ +Y GG +G A+++FD+M ++VV W+ MIR + +G ++ L
Sbjct: 129 IRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGL 188
Query: 212 DLLKDM 217
L K M
Sbjct: 189 HLFKQM 194
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+S K A++++ M + D V +VL + + G+ +H
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 153 KNGFHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+G D + V NAL+ Y + G L A +F KM ++VVSW+T+I NG + +
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 212 DLLKDMRVAG-VKPSEIAMISIV 233
DL M G V P+E + ++
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVL 344
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 72 SSCSF--QLPILALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVP 129
S+C F QLP + ++ +I Y A+++ M + E F +
Sbjct: 98 STCEFFDQLP-------QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
+VL + + + G++VH F+VK G G+V V N+L+ MY + G A+ +FD+MV +
Sbjct: 151 NVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVR 210
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDM 217
D+ SW+ MI + + G +D A+ + M
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y ++ A+ ++ M +S+ + ++L S + S G+++H V
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGLLDEAL 211
K+G V V NALI MY + G++ A + FD + +D VSW++MI + ++G +EAL
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 212 DLLKDMRVAGVKPSEIAMISI 232
+L + M + G++P I + +
Sbjct: 501 ELFETMLMEGLRPDHITYVGV 521
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 34/174 (19%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDT-EVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I+ + + A+ I++ M R D F + SVL AC+ + +G+++H +
Sbjct: 246 WNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK-------------------------- 185
V GF V NALI MY G + AR+L ++
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 186 -------MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
+ +DVV+W+ MI Y ++G EA++L + M G +P+ + ++
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y++ A+ ++ M + + F S L A + I S + G+E+H +++
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI 338
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNGLLDEAL 211
+ + V ++LI MY + GSL + ++F K D V W+TMI + ++GL +AL
Sbjct: 339 RTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKAL 398
Query: 212 DLLKDMRVAGVKPSEIAMISIVHV 235
+L DM V+P+ ++ I++
Sbjct: 399 RMLDDMIKFRVQPNRTTLVVILNA 422
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 31/182 (17%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++ Y ++ A+ Y RR+ + + F +L AC QL + H V+
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVL 206
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG---------- 202
GF +V + ++I Y + G + A++ FD+M KD+ W+T+I Y
Sbjct: 207 VAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEK 266
Query: 203 ---------------------RNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
R G + ALDL + M GVKP + S + A +A
Sbjct: 267 LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIAS 326
Query: 242 LK 243
L+
Sbjct: 327 LR 328
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 114 TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEG 173
T +R +T + + ++ +K I + ++ +++H ++N ++ N ++ Y +
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH---LRN-----LYSWNNMVSGYVKS 126
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
G L AR +FD M +DVVSW+TM+ Y ++G L EAL K+ R +G+K +E + ++
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLL 186
Query: 234 HVLAELADLKL 244
+ L+L
Sbjct: 187 TACVKSRQLQL 197
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRR-TDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y++N E A+K M TD + + F S L AC+ + + VH +
Sbjct: 132 WNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLM 191
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ +G + + +AL+ +Y + G +G +R++F + DV W+ MI + +GL EA+
Sbjct: 192 IDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAI 251
Query: 212 DLLKDMRVAGVKPSEIAMISIV 233
+ +M V P I + ++
Sbjct: 252 RVFSEMEAEHVSPDSITFLGLL 273
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I++Y+ N P ++ ++ M R + + + +L AC + G VH ++
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI 277
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ + V + ALI MYG+ +G AR++FD + ++ V+W+ MI ++ +G + L+
Sbjct: 278 RTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLE 337
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
L + M ++P E+ + ++
Sbjct: 338 LFEAMINGMLRPDEVTFVGVL 358
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 99 SYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHG 158
+Y+ ++ P+ A+ Y + R DS+ S++ G+ H +K+G
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQ 151
Query: 159 DVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDM 217
+ V N+L+ MY G+L A++LF ++ +D+VSW+++I RNG + A L +M
Sbjct: 152 VLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM 210
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Query: 92 IYSFLITSYIKNN-CPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++ +I+ Y N E AVK + M+R D V ACS + S +++H
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 151 VVKNGFHGD-VFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
+K+ + + V NALI +Y + G+L AR +FD+M + VS++ MI+ Y ++G E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLA 237
AL L + M +G+ P++I ++++ A
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACA 458
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI+ Y A+ ++ MR+ EVD F + ++ AC L +++H F V
Sbjct: 108 YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSV 165
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-KDVVSWSTMIRSYGRNGLLDEAL 211
GF V NA + Y +GG L A +F M +D VSW++MI +YG++ +AL
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
L K+M G K + S+++ L L L
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +Y ++ A+ +Y M ++D F + SVL A + + G + H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 153 KNGFHGDVFVCNALIMMYGE-GGSLGY--ARQLFDKMVGKDVVSWSTMIRSYGRN-GLLD 208
K GFH + V + LI Y + GG G + ++F +++ D+V W+TMI Y N L +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELA 240
EA+ + M+ G +P + + + + + L+
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ ++N A + + M R + + +L + + G+ +H +
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 153 KNG--FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
K + D+ + N+L+ MY + G++ A ++F KMV KD VSW++MI +GL D+A
Sbjct: 494 KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKA 553
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L+L K+M +G KP+ + + ++
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVL 576
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%)
Query: 122 EVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQ 181
VD+ LKAC+ +++H + + G D +C L+ Y + G L A +
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 182 LFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
LFD+M +DV SW+ +I EA++L K M G++ SE+ +++ + + L D
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 242 LK 243
+K
Sbjct: 226 VK 227
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A ++ LI + N A+++Y M V + L ACS + + GE +
Sbjct: 176 ASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI--- 232
Query: 151 VVKNGFHG----DVFVCNALIMMYGEGGSLGYARQLFDKMVGK-DVVSWSTMIRSYGRNG 205
FHG +V V NA I MY + G + A Q+F++ GK VV+W+TMI + +G
Sbjct: 233 -----FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG 287
Query: 206 LLDEALDLLKDMRVAGVKPSEIAMIS 231
AL++ + G+KP +++ ++
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLA 313
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYM--RRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
+Y +I Y +N P++A+K++ M R + + D + SV+ A S + + G V
Sbjct: 296 VYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVES 355
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
++ ++G D + +LI +Y +GG A ++F + KD VS+S MI G NG+ E
Sbjct: 356 YITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATE 415
Query: 210 ALDLLKDMRVAGVKPSEIAMISIV 233
A L M + P+ + ++
Sbjct: 416 ANSLFTAMIEKKIPPNVVTFTGLL 439
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 107 ENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNAL 166
+ V +Y M + S V SVL+AC + + G+ +H +KNG G V+V L
Sbjct: 86 KETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGL 145
Query: 167 IMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ +Y G + A++ FD + K+ VSW++++ Y +G LDEA
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNG 155
+I SY + C E+A++++ D F SVL + + + G +VH V+K G
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLG 365
Query: 156 FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLK 215
F D V +L+ MY + GS+ A +F K GKD++ W+T+I RN E+L +
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 216 DMRV-AGVKPSEIAMISIV 233
+ + +KP + ++ I+
Sbjct: 426 QLLMNQSLKPDRVTLMGIL 444
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I+ + E ++++ M+R + F S+L SL+ + GE++H +
Sbjct: 104 WNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-SILA--SLVTCVRHGEQIHGNAI 160
Query: 153 KNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+G ++ V N+++ MY G YA +F M +DVVSW+ +I S +G + AL
Sbjct: 161 CSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVAL 220
Query: 212 DLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
D MR ++P E + +V + ++L +L
Sbjct: 221 DQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 143 LGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
L + VH +++ GF + N + +Y + GS+ A QLFD + K+ ++W+ ++
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 203 RNGLLDEALDLLKDM 217
+NG L+ ALDL +M
Sbjct: 82 KNGYLNNALDLFDEM 96
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I Y K A+K+Y M E D + V S+L C + +LG+ VH ++
Sbjct: 200 FNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIE 259
Query: 153 KNG--FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
+ G + ++ + NAL+ MY + G A++ FD M KD+ SW+TM+ + R G ++ A
Sbjct: 260 RRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA 319
Query: 211 LDLLKDM 217
+ M
Sbjct: 320 QAVFDQM 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV--DSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ L+ Y K C + V+ Y +V D + S++ + G VH
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGL 393
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V++ GD F+ +ALI MY + G + A +F KDV W++MI +G +A
Sbjct: 394 VIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
L L M+ GV P+ + +++++
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVL 476
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 92 IYSFLIT--SYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
+Y+ +I+ S KN C +Y+ M R D ++KA S + + ++H
Sbjct: 102 VYNTMISAVSSSKNEC----FGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIHC 154
Query: 150 FVVKNG-FHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
++ +G ++ N+L+ Y E G+ G A ++F +M DV S++ MI Y + G
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
EAL L M G++P E ++S++ L+D++L
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRL 250
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI+ Y + N A+K++ M + D+ + S L AC+ +Q G+ +HD+
Sbjct: 217 WNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTK 276
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
+ D F+ L+ Y + G + A ++F+ K + +W+ MI +G + +D
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVD 336
Query: 213 LLKDMRVAGVKPSEIAMISIV 233
+ M +G+KP + IS++
Sbjct: 337 YFRKMVSSGIKPDGVTFISVL 357
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 111 KIYTYMRRTDTEVDSFIVPSVLKACSLIPS--FQLGEEVHDFVVKNGFHGDVFVCNALIM 168
+ + MRR D P V KAC+ + L + +H ++ G D+F N LI
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 169 MYG-------------------------------EGGSLGYARQLFDKMVGKDVVSWSTM 197
+Y + + AR+LFD M +D+VSW+++
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 198 IRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
I Y + EA+ L +M G+KP +A++S + A+ D +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQ 266
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 38/190 (20%)
Query: 93 YSFLITSYIKNN-CPENAVKIYTYMRRT---DTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
Y+ L++ + K + C A++++ M R D +D F V +++K + + + GE++H
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSL-------------------------GYARQL- 182
+VK G G F ++LI MY + G Y R+
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 183 FDKMVG--------KDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVH 234
DK + D +SW+T+I Y +NG +EAL + M G+K E + ++++
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Query: 235 VLAELADLKL 244
VL+ L LK+
Sbjct: 269 VLSSLKSLKI 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDF 150
+++ + Y+ P++ +++ +T DS ++ SVL ACSL + G+E+H
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
++ G D + A + MY + G++ YA ++FD +D V ++ MI +G ++
Sbjct: 419 SLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKS 478
Query: 211 LDLLKDMRVAGVKPSEIAMISIV 233
+DM G KP EI ++++
Sbjct: 479 FQHFEDMTEGGFKPDEITFMALL 501
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ LI Y +N E A+K+ M + D +VL S + S ++G+EVH V+
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVL 287
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
KNG + + FV + ++ +Y + G++ YA ++ S S+MI Y G + EA
Sbjct: 288 KNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKR 347
Query: 213 LLKDM 217
L +
Sbjct: 348 LFDSL 352
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 67/125 (53%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++S+ + N++K++ MRR E+D V + C+ + ++ H V
Sbjct: 79 WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAV 138
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G V VCNAL+ MYG+ G + +++F+++ K VVSW+ ++ + + L+ +
Sbjct: 139 KMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGRE 198
Query: 213 LLKDM 217
+ +M
Sbjct: 199 VFHEM 203
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 128 VPSVLKACSLIPSFQLGEEVHDFVVKNGFHG--DVFVCNALIMMYGEGGSLGYARQLFDK 185
V +L+ C+ + G+E+H + +G ++ NAL Y G + A++LFD+
Sbjct: 9 VRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 186 --MVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ KD V W+T++ S+ R GLL ++ L +MR V+ +++++ + V A+L DL
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDL 127
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A ++ L+ +Y + ++ ++ R + + +++K+C+ + F G H +
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVY 241
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEA 210
V+KN + FV +LI +Y + G L +AR++FD+M +DV ++ MIR +G E
Sbjct: 242 VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 211 LDLLKDMRVAGVKPSEIAMI 230
++L K + G+ P +
Sbjct: 302 IELYKSLISQGLVPDSATFV 321
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 92 IYSFLITSYIKN-NCPENAVKIYTY-----MRRTDTEVDSFIVPSVLKACSLIPSFQL-G 144
+Y+ LI+S + N N + + Y R + F PS+ KA + G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 145 EEVHDFVVK--NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
+H V+K + D FV AL+ Y G L AR LF+++ D+ +W+T++ +Y
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 203 RNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+ +D ++L V+P+E+++++++ A L +
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEF 232
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRT-DTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I Y K E+ ++ MR+ D +V+S + + KAC ++ G ++H V
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLV 301
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
+ D+F+ N+L+ MY + G +G A+ +F M KD VSW+++I + + EA
Sbjct: 302 SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY 361
Query: 212 DLLKDM 217
+L + M
Sbjct: 362 ELFEKM 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I++++ N E A+ + M + + +S+ SVL A + + G ++H VV
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K D+ V N+L+ MY + G+ A ++F + ++VS++TMI Y NG +AL
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 213 LLKDMRVAGVKPSEIAMISI----VHV 235
L + +G +P+ + +++ VHV
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHV 552
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ L++ Y+++ + + ++ + R+D + F + L AC+ + LG +H +V
Sbjct: 124 WNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV 183
Query: 153 KNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEAL 211
K G G+V V N LI MYG+ G + A +F M KD VSW+ ++ S RNG L+ L
Sbjct: 184 KLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGL 243
Query: 212 DLLKDM 217
M
Sbjct: 244 WFFHQM 249
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 143 LGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYG 202
L ++H +V K+GF + + N+L+ Y SL A ++FD+M DV+SW++++ Y
Sbjct: 73 LCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYV 132
Query: 203 RNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAEL 239
++G E + L ++ + V P+E + + + A L
Sbjct: 133 QSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ ++T Y+ + A + +T M + D + + VL A + + G +H
Sbjct: 288 WNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH 347
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
K G V V +ALI MY + G L +A +F M K+++ W+ MI Y RNG EA+
Sbjct: 348 KLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 213 LLKDMRVAG-VKPSEIAMISIVHV 235
L ++ +KP ++++ V
Sbjct: 408 LFNQLKQERFLKPDRFTFLNLLAV 431
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGF--HGDVFVCNALIMMYGEG 173
+R TDT + VL A S ++G VH ++ K GF DVF+ AL+ MY +
Sbjct: 216 VRPTDT-----TMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
G L A +F+ M K+V +W++M NG +E +LL M +G+KP+EI S++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 95 FLITSYIKNNCPENAVKIYT-YMRRTD----TEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
FL + +K + PE++++I+ Y ++ E V + + ++G VH
Sbjct: 76 FLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHG 135
Query: 150 FVVKNGF-HGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGR----- 203
V K GF + + L+ Y + G L YAR++FD+M + V+W+ MI Y
Sbjct: 136 MVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKG 195
Query: 204 NGLLDEALDLLKDMRV--AGVKPSEIAMISIVHVLAELADLKL 244
N +A+ L + +GV+P++ M+ ++ +++ L++
Sbjct: 196 NHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEI 238
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 96 LITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSL-IP-SFQLGEEVHDFVVK 153
L+TS + ++ ++++ M T +D + +VLKA SL +P S VH +K
Sbjct: 388 LMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIK 447
Query: 154 NGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDL 213
+G+ DV V +LI Y + G +R++FD++ ++ +++I Y RNG+ + + +
Sbjct: 448 SGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKM 507
Query: 214 LKDMRVAGVKPSEIAMISIV 233
L++M + P E+ ++S++
Sbjct: 508 LREMDRMNLIPDEVTILSVL 527
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
A+ + L+ + + + ++Y M + +++ CS G+++H
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 151 VVKNGFH-GDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDE 209
VVK+G++ ++FV N L+ Y G L + + F+ + KDV+SW++++ G + +
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 210 ALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+LDL M+ G +PS +S ++ + +D++
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQ 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI+ + C A+++Y M + PSVL CS + G +VH V+
Sbjct: 80 YNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVI 139
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF ++FV +AL+ +Y + A +LFD+M+ +++ + ++R + + G +
Sbjct: 140 SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFE 199
Query: 213 LLKDMRVAGV 222
+ M + GV
Sbjct: 200 VYLRMELEGV 209
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 127 IVPSVLKACSLIP-SFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDK 185
+ +VLKACS + + G++VH +K GF D + LI MYG+ G + A ++F
Sbjct: 298 VFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKS 357
Query: 186 MVGKDVVS-WSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSE 226
+ VS W+ M+ SY +NG+ EA+ LL M+ G+K +
Sbjct: 358 SKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 110 VKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGF--HGDVFVCNALI 167
V + + ++ ++ S+I+ VLKAC++I F+LG++VH K GF D ++ +LI
Sbjct: 178 VSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLI 237
Query: 168 MMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEI 227
YGE L A + ++ + V+W+ + + R G E + +M G+K +
Sbjct: 238 RFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVS 297
Query: 228 AMISIVHVLAELAD 241
+++ + ++D
Sbjct: 298 VFSNVLKACSWVSD 311
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 81 LALGYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPS 140
+ L +S Y+ LI++Y ++ + A+++ M T+ D F ++L
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 141 FQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWST 196
+ + + + G ++ NA I MYG G ++FD++ + D+V+W+T
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 197 MIRSYGRNGLLDEALDLLKDMRVAGVKP 224
++ +G+NG+ E + K+M+ AG P
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHD 149
A Y+ LIT + + + A +++ M+ D ++L + +V +
Sbjct: 279 AYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLN 338
Query: 150 FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNG 205
+V NGF + N+LI Y G L A +L ++M K DV +++T++ + R G
Sbjct: 339 EMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAG 398
Query: 206 LLDEALDLLKDMRVAGVKPS 225
++ A+ + ++MR AG KP+
Sbjct: 399 KVESAMSIFEEMRNAGCKPN 418
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 93 YSFLITSYIKNNCPENAV-KIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
Y+ ++ + K P N + + M+ D++ +++ C Q +V + +
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV----GKDVVSWSTMIRSYGRNGLL 207
GF D NAL+ +YG+ A ++ ++MV +V+++++I +Y R+G+L
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 208 DEALDLLKDMRVAGVKP 224
DEA++L M G KP
Sbjct: 366 DEAMELKNQMAEKGTKP 382
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 79 PILALGYYSSGAAIYSFLITSYIKN-NCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSL 137
PI + + + +++ +I + + N + P+ I Y+R + V P L
Sbjct: 13 PIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVS----PDFHTFPFL 68
Query: 138 IPSFQ------LGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDV 191
+PSF LG+ H ++ G D FV +L+ MY G L A+++FD KD+
Sbjct: 69 LPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDL 128
Query: 192 VSWSTMIRSYGRNGLLDEALDLLKDM 217
+W++++ +Y + GL+D+A L +M
Sbjct: 129 PAWNSVVNAYAKAGLIDDARKLFDEM 154
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMR-----RTDTEVDSFIVPSVLKACSLIPSFQLGEEV 147
+S LI Y+ + A+ ++ M+ + F + +VL AC + + + G+ V
Sbjct: 162 WSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWV 221
Query: 148 HDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM-VGKDVVSWSTMIRSYGRNGL 206
H ++ K D+ + ALI MY + GSL A+++F+ + KDV ++S MI GL
Sbjct: 222 HAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGL 281
Query: 207 LDEALDLLKDMRVA-GVKPSEIAMISIV 233
DE L +M + + P+ + + I+
Sbjct: 282 TDECFQLFSEMTTSDNINPNSVTFVGIL 309
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 71/145 (48%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
++ +I +++N E + + RR E D +VL++C + +L + +H ++
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
GF G+ + AL+ +Y + G L + +F ++ D ++W+ M+ +Y +G +A+
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLA 237
+ M G+ P + +++ +
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACS 347
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 130 SVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK 189
S++ AC S + G +H V+K G +V V NA I YG+ G L + +LF+ + K
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 190 DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLKL 244
++VSW+TMI + +NGL ++ L R G +P + ++++ ++ ++L
Sbjct: 199 NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 114 TYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEG 173
+++ D V S I + +K+C S +L +H VVK+ + F+ + L+ Y
Sbjct: 25 SFVHSLDANVSSLI--AAVKSC---VSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79
Query: 174 GSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVA--GVKPSEIAMIS 231
G A +LFD+M +D+VSW+++I Y G L + ++L M ++ G +P+E+ +S
Sbjct: 80 GHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS 139
Query: 232 IV 233
++
Sbjct: 140 MI 141
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 84 GYYSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQL 143
GYY +Y+ L+ Y K+N A+++Y M E+D I +++ +
Sbjct: 267 GYYVD-KVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVS-----WSTMI 198
G + ++K G +VF + +I Y + G++ YA +LF G + +S ++ +I
Sbjct: 326 GRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLI 385
Query: 199 RSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ + G +D+A+DLL M G+ P I ++ +L + +LK
Sbjct: 386 FGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELK 430
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDS-FIVPSVLKACSLIPSF-QLG--EEV 147
+ S +I+ + K PE A+ + ++ VDS +VP+++ +L+ + QLG +EV
Sbjct: 173 VCSAVISGFCKIGKPELALGFF------ESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 148 HDFVVK---NGFHGDVFVCNALIMMYGEGGSLGYA----RQLFDKMVGKDVVSWSTMIRS 200
D V + GF D + I Y +GG+L A R++ +K + +DVVS+S +I
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Query: 201 YGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+ G ++EAL LL M GV+P+ I +I+ L ++ L+
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y LI + ++ E A++ + M + + ++ S++KA S + + V+D +
Sbjct: 622 VYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK---DVVSWSTMIRSYGRNGLLD 208
+ DV N+++ + + G + A +F+ + K DV+S++TM+ Y G+LD
Sbjct: 682 KDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLD 741
Query: 209 EALDLLKDMRVAGV 222
EA+++ ++MR +G+
Sbjct: 742 EAIEVAEEMRESGL 755
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 164 NALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLDEALDLLKDMRV 219
N LI +YG+ G L A LF +M+ D V+++TMI + G +G L EA LLK M
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 220 AGVKPSEIAMISIVHVLAELADLK 243
G+ P ++ + A+ D++
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIE 392
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVD----SFIVPSVLKACSLIPSFQLGEEVH 148
Y+ L+ ++ P A +IY M +TD+ +D I+PS+ K+ L +F+L +++
Sbjct: 281 YNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMK 340
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG----KDVVSWSTMIRSYGRN 204
+ ++ F V ++L+ G+ G L + +++ +M G + ++I SY +
Sbjct: 341 ERKLRPSFS----VFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 205 GLLDEALDLLKDMRVAGVKPS 225
G LD AL L +M+ +G +P+
Sbjct: 397 GKLDTALRLWDEMKKSGFRPN 417
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 110 VKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMM 169
K + M+R + D S+L CS ++ + D + DVF N L+
Sbjct: 324 AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 170 YGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
+GG + A ++ +M K +VVS+ST+I + + G DEAL+L +MR G+
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443
Query: 226 EIAMISIVHVLAELA 240
++ +++ + ++
Sbjct: 444 RVSYNTLLSIYTKVG 458
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
YS +I + K + A+ ++ MR +D ++L + + + ++ +
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLD 208
G DV NAL+ YG+ G +++F +M V +++++ST+I Y + GL
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
EA+++ ++ + AG++ + +++ L +
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCK 561
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 4/143 (2%)
Query: 87 SSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEE 146
S Y+ LI Y K E A ++ ++ D + ++ +
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVR 352
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYG 202
VHD +++ G + +CN+LI Y + G L A Q+F +M + D +++T++ Y
Sbjct: 353 VHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYC 412
Query: 203 RNGLLDEALDLLKDMRVAGVKPS 225
R G +DEAL L M V P+
Sbjct: 413 RAGYVDEALKLCDQMCQKEVVPT 435
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
YS L++ Y++N+ A+ ++ M+ + +D ++ + + + + +
Sbjct: 298 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKD----VVSWSTMIRSYGRNGLLD 208
K +V N ++ +YGE G A LF M KD VV+++TMI+ YG+ +
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+A +L+++M+ G++P+ I +I+ + + L
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI +Y ++ A+++ M+ +S S++K S+I + + + + +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDV----VSWSTMIRSYGRNGLL 207
G +VF ALI YG+ G + L +M K+V ++++ MI Y R+G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVH 234
EA LL +MR G+ P I ++
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIY 793
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHD--FVVKN----GFHGDVFVCNALIMMYGEGGSL 176
V+ + P+++ L+ + + D FV+K GF +V V N LI + E GSL
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 177 GYARQLFDKMVGKDVV----SWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
A ++ D MV K + +++T+I+ Y +NG D A LLK+M G ++ + S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 233 VHVLA 237
+ +L
Sbjct: 442 ICLLC 446
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 92 IYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV 151
+Y+ LI +Y ++ A+++ M+ +S S++K S+I + + + + +
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 152 VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDV----VSWSTMIRSYGRNGLL 207
G +VF ALI YG+ G + L +M K+V ++++ MI Y R+G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 208 DEALDLLKDMRVAGVKPSEIAMISIVH 234
EA LL +MR G+ P I ++
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIY 793
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHD--FVVKN----GFHGDVFVCNALIMMYGEGGSL 176
V+ + P+++ L+ + + D FV+K GF +V V N LI + E GSL
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 177 GYARQLFDKMVGKDVV----SWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
A ++ D MV K + +++T+I+ Y +NG D A LLK+M G ++ + S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 233 VHVLA 237
+ +L
Sbjct: 442 ICLLC 446
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI SY + N + A+ ++ M+ E D +++ + + +++ +
Sbjct: 397 YNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
+ G D F + +I G+ G L A +LF +MVG+ ++V+++ MI + + +
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
AL L +DM+ AG +P ++ ++ VL L+
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 551
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEV-DSFIVPSVLKACSLIPSFQLGEEVHDFV 151
++ +I + + E AV + M R + + P + A S I S G+ +H
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 152 VKN-GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG--KDVVSWSTMIRSYGRNGLLD 208
+K G +VFV N+LI Y + G++ + F+K+ +++VSW++MI Y NG +
Sbjct: 253 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 209 EALDLLKDM-RVAGVKPSEIAMISIV 233
EA+ + + M + ++P+ + ++ ++
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVL 338
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%)
Query: 109 AVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIM 168
AV+I R VD + + + C + Q + VH+F+ + D+ N++I
Sbjct: 165 AVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIE 224
Query: 169 MYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
MY GS+ A +F+ M +++ +W +IR + +NG ++A+D + G KP
Sbjct: 225 MYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEM 284
Query: 229 MISIVHVLAELADL 242
I L D+
Sbjct: 285 FKEIFFACGVLGDM 298
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +++S++K + A + M D +++ + L V D +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLD 208
K G + D+ + N LI G+ L A QLFD M + DVVS++TMI + G L
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 209 EALDLLKDMRVAGVKPSEI 227
EA LK M AG P+ +
Sbjct: 753 EAYKYLKAMLDAGCLPNHV 771
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
+S Y+ L+ N P A+ + +MR E +++ S + +
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACK 347
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSY 201
D VK G DV +I Y GG L A ++F +M K +V ++++MIR +
Sbjct: 348 YFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVL 236
G EA LLK+M G P+ + ++V+ L
Sbjct: 408 CMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI + KN E A + + MRR+ V + +++ F V D ++
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALD 212
G + N I + G + AR+L M DVVS++T++ Y + G EA
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 213 LLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
L D+R + PS + +++ L E +L+
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 129 PSVLKACSLIPSF------QLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
P L C+LI +F +G ++ D + +N D+ VCN +I + + + A +
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 183 FDKMV-GK---DVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
F+ ++ GK D+V+++TMI Y LDEA + + ++V P+ + + ++HVL +
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 239 LADL 242
D+
Sbjct: 684 NNDM 687
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
Y+ +Y+ +I + + +A K++ M + + F ++ L E
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 146 EVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSY 201
++ +++NG+ G + CN +I + G A ++F M V + ++++ +I+ +
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 202 GRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVL 236
+ +++ L L K+++ G+KPS +A ++V L
Sbjct: 434 CKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 90 AAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSF------QL 143
+++ LI + + N + A+K++ M + D +V++ + +F +
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 144 GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV-GK---DVVSWSTMIR 199
G ++ D + +N D+ VCN +I + + + A + F+ ++ GK D+V+++TMI
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 200 SYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
Y LDEA + + ++V P+ + + ++HVL + D+
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRN 204
D +V+NG DV N+++ G A L KM V DV ++ST+I S R+
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 205 GLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
G +D A+ L K+M G+K S + S+V L +
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKA-C---SLIPSFQLGEEVH 148
YS L+ ++ K + A+K Y MRR + + S++ A C +L +F+LG E
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE-- 427
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRN 204
+++ G +V ALI + + A +LF KM V ++ S++ +I + +
Sbjct: 428 --MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 205 GLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
+D AL+LL +++ G+KP + + + L L ++
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I+ Y + A +++ + D+ S+L A + + + +EV+ +
Sbjct: 335 YNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ 394
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG-----KDVVSWSTMIRSYGRNGLL 207
K GF D N +I MYG+ G L A QL+ M G D ++++ +I S G+
Sbjct: 395 KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 208 DEALDLLKDMRVAGVKPS 225
EA L+ +M G+KP+
Sbjct: 455 VEAAALMSEMLDVGIKPT 472
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 42/188 (22%)
Query: 93 YSFLITSYIKNN--CPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
++ LI + +K+ P AV++ +R + D+ ++L ACS + +V +
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM------------------------ 186
+ + D++ NA+I +YG G A +LF ++
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 187 ---------------VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMR-VAGVKPSEIAMI 230
GKD ++++T+I YG+ G LD AL L KDM+ ++G P I
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 231 SIVHVLAE 238
++ L +
Sbjct: 443 VLIDSLGK 450
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSF------QLGEE 146
Y+ +I Y K + + K+Y MR + P++ +L+ +F + EE
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCK------PNICTYTALVNAFAREGLCEKAEE 320
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYG 202
+ + + ++G DV+V NAL+ Y G A ++F M D S++ M+ +YG
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 203 RNGLLDEALDLLKDMRVAGVKPS 225
R GL +A + ++M+ G+ P+
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPT 403
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 95 FLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
L+++Y K I M E D+F++ S+L + F E++ +
Sbjct: 409 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 468
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLDEA 210
D+ N LI +YG+ G L +LF ++ K DVV+W++ I +Y R L +
Sbjct: 469 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 528
Query: 211 LDLLKDMRVAGVKP 224
L++ ++M +G P
Sbjct: 529 LEVFEEMIDSGCAP 542
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSF------QLGEE 146
Y+ +I Y K + + K+Y MR + P++ +L+ +F + EE
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCK------PNICTYTALVNAFAREGLCEKAEE 342
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYG 202
+ + + ++G DV+V NAL+ Y G A ++F M D S++ M+ +YG
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 203 RNGLLDEALDLLKDMRVAGVKPS 225
R GL +A + ++M+ G+ P+
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPT 425
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 95 FLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKN 154
L+++Y K I M E D+F++ S+L + F E++ +
Sbjct: 431 LLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 490
Query: 155 GFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLDEA 210
D+ N LI +YG+ G L +LF ++ K DVV+W++ I +Y R L +
Sbjct: 491 PCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKC 550
Query: 211 LDLLKDMRVAGVKP 224
L++ ++M +G P
Sbjct: 551 LEVFEEMIDSGCAP 564
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 159 DVFVCNALIMMYGEGGSLGYA----RQLFDKMVGKDVVSWSTMIRSYGRNGLLDEALDLL 214
D + N +I +YGE G + ++L + +G D+ S++T+I++YG G+++EA+ L+
Sbjct: 802 DHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLV 861
Query: 215 KDMRVAGVKPSEIAMISIVHVL 236
K+MR + P ++ ++V L
Sbjct: 862 KEMRGRNIIPDKVTYTNLVTAL 883
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMR--RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDF 150
YS +IT Y + + A ++ M+ R ++++++V +L A S +L E +
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLV--MLNAYSQQGKMELAESILVS 339
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVG----KDVVSWSTMIRSYGRNGL 206
+ GF ++ N LI YG+ + A+ LF ++ D S+ +MI +GR
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIVHVLAELAD 241
+EA ++++ G KP+ + +++++ A+ D
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGD 434
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
YS +IT + N A++ + M +T D ++L S + +++ V
Sbjct: 224 YSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAV 283
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLD 208
G+ D + L M+GE G R + +M V +VV ++T++ + GR G
Sbjct: 284 ATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPG 343
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHV 235
A L +M AG+ P+E + ++V +
Sbjct: 344 LARSLFNEMLEAGLTPNEKTLTALVKI 370
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
YS LI + K N + A ++ M + + I +++ S L +E + ++
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
G D+ + N L+ + + G L AR + D M+ + D ++++T+I + R G ++
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 209 EALDLLKDMRVAGVKPSEIAMISIV 233
AL++ K+M G++ + ++V
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALV 457
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I+ Y K NA+ + + R D ++L++ + EV D ++
Sbjct: 175 YNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
+ + DV LI +G+A +L D+M + DVV+++ ++ + G LD
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 209 EALDLLKDMRVAGVKPSEI 227
EA+ L DM +G +P+ I
Sbjct: 292 EAIKFLNDMPSSGCQPNVI 310
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 129 PSVLKACSLIPSFQLGEEVHD------FVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
PS++ SL+ F L + D +VK+G+ +V V N LI + G L A +L
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 183 FDKM----VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
++M +G DVV+++T++ +G +A +L+DM + P + +++ V +
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 239 LADL 242
+L
Sbjct: 259 QGNL 262
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 66 HFIKTCSSCSFQLPILA----LGYYSS----GAAIYSFLITSYIKNNCPENAVKIYTYMR 117
H CS SF L +L LGY S G+ ++ F + + I + A + M
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGD-----AFSLVILMV 168
Query: 118 RTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLG 177
++ E + + +++ + E+ + + K G DV N L+ G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 178 -YARQLFDKM---VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIV 233
AR L D M + DVV+++ +I + + G LDEA +L K+M + V P+ + SI+
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 234 HVLA 237
+ L
Sbjct: 289 NGLC 292
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 123 VDSFIVPSVLKACSLIPSFQL------GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSL 176
++ I P+V+ +LI +F E+++D ++K D+F ++LI + L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 177 GYARQLFDKMVGKD----VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
A+ +F+ M+ KD VV+++T+I+ + + +DE ++L ++M G+ + + ++
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 233 VH 234
+H
Sbjct: 438 IH 439
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 116 MRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGS 175
M+ D + D F ++ I + + D ++++G D ALI + G
Sbjct: 752 MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGY 811
Query: 176 LGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMIS 231
L A+ +FD+M V DVV ++ +I RNG + +A+ L+K+M G+KP++ A +S
Sbjct: 812 LKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTK-ASLS 870
Query: 232 IVH 234
VH
Sbjct: 871 AVH 873
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 74/150 (49%), Gaps = 4/150 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ +I ++ K NC ++A+ + M E D +++ + EE+ + +
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
+ G N +I YG+ ++L KM + +VV+ +T++ YG++G +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAE 238
+A++ L++M+ G+KPS ++++ A+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTD----TEVDSFIVPSVLKACSLIPSFQLGEEVH 148
Y+ LI + KN+ + A+ ++ ++ T + + ++ + K + F L EE+
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK---DVVSWSTMIRSYGRNG 205
+ G DV N LI G++ A++LFD++ K D+V++ ++ Y R G
Sbjct: 429 ----REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKG 484
Query: 206 LLDEALDLLKDMRVAGVKPSEI 227
+A LLK+M G+KP +
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHL 506
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 123 VDSFIVPSVLKACSLIPSFQL------GEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSL 176
++ I P+V+ +LI +F E+++D ++K D+F ++LI + L
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 177 GYARQLFDKMVGKD----VVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISI 232
A+ +F+ M+ KD VV++ST+I+ + + ++E ++L ++M G+ + + ++
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 233 VH 234
+H
Sbjct: 440 IH 441
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 123 VDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQL 182
VD + + K C Q + VH + + H D+ + L+ MY G A +
Sbjct: 252 VDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASV 311
Query: 183 FDKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
F+KM K++ +W +IR + +NG ++A+D+ + G P I + L D+
Sbjct: 312 FEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDV 371
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 91 AIYSFLITSYIKNNCPENAVKIYTYMRR--TDTEVDSFI--VPSVLKACSLIPSFQLGEE 146
IYS+L+ + K A +++ M E DS++ + S+ A I + ++ +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 147 VHDFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMV----GKDVVSWSTMIRSYG 202
+H+ G D + N + G+ + + LF+KM D+ +++ +I S+G
Sbjct: 433 IHE----KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 203 RNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
R G +DEA+++ +++ + KP I+ S+++ L + D+
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 4/140 (2%)
Query: 89 GAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVH 148
GA S L+ + A I + E+D+ +++KA Q E++
Sbjct: 738 GAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIY 797
Query: 149 DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRN 204
+ + +G + N +I +YG G L A ++F D ++ MI YG+
Sbjct: 798 ERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKG 857
Query: 205 GLLDEALDLLKDMRVAGVKP 224
G + EAL L +M+ G+KP
Sbjct: 858 GKMSEALSLFSEMQKKGIKP 877
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
+N DVF N +I + EG L A +L ++M G +V+W +I ++ + G +D
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
EA+ LK+M+ G++ + S++ + +L
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 111 KIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMMY 170
+ +T ++ + D I S+L + + E + + + ++G D+ N+L+ MY
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMY 676
Query: 171 GEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKP 224
G A ++ + + D+VS++T+I+ + R GL+ EA+ +L +M G++P
Sbjct: 677 VRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 118 RTDTEVDSF-IVPSVLKACSLIPSFQLGEEVHDFV-------VKNGFHGDVFVCNALIMM 169
RT + + +F +VP SLI F + VHD V + G DVF N LI
Sbjct: 79 RTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHS 138
Query: 170 YGEGGSLGYARQLF-DKMVGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIA 228
+ + G L +A L ++++ D V+++T+I +GL DEA L +M G+ P ++
Sbjct: 139 FCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVS 198
Query: 229 MISIV 233
+++
Sbjct: 199 YNTLI 203
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ L+ S K N +A+ +Y+ M VD + ++ + E+ ++
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYAR----QLFDKMVGKDVVSWSTMIRSYGRNGLLD 208
++ +V AL+ + G L A Q+ +K V +VV++S+MI Y + G+L+
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 209 EALDLLKDMRVAGVKPS 225
EA+ LL+ M V P+
Sbjct: 417 EAVSLLRKMEDQNVVPN 433
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 81/198 (40%), Gaps = 5/198 (2%)
Query: 50 KPNVQLNLDQTQQIHGHFIKTCSSCSFQLPILALGYYSSGAAIYSFLITSYIKNNCPENA 109
KP+V + + + + TC++ +P + ++ Y + E A
Sbjct: 492 KPDV-VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 110 VKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVVKNGFHGDVFVCNALIMM 169
++ + M+ + F+ S++K I EV D + + G DV + L+
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 170 YGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYGRNGLLDEALDLLKDMRVAGVKPS 225
+ G + +++ M + D+ ++S + + Y R G ++A +L MR GV+P+
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 226 EIAMISIVHVLAELADLK 243
+ I+ ++K
Sbjct: 671 VVIYTQIISGWCSAGEMK 688
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGL 206
+ +NG DV L+ YG G A+++F M + +VV+++ +I +YG NG
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIV 233
L EA+++ + M G+KP+ +++ +++
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLL 335
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI SY + N A+ ++ M+ + D +++ + + +++ +
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
G D F + +I G+ G L A +LF +MV + ++V+++ M+ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
AL L +DM+ AG +P ++ ++ VL L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI SY + N A+ ++ M+ + D +++ + + +++ +
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
G D F + +I G+ G L A +LF +MV + ++V+++ M+ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
AL L +DM+ AG +P ++ ++ VL L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 86 YSSGAAIYSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGE 145
+S + Y+ L+ K N P A+ +M+ I PSVL +LI
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG------IDPSVLHYTTLIDGLSRAG 338
Query: 146 EVH------DFVVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWS 195
+ D +VK G DV +I Y G L A+++F +M K +V +++
Sbjct: 339 NLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYN 398
Query: 196 TMIRSYGRNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADL 242
+MIR G EA LLK+M G P+ + ++V L + L
Sbjct: 399 SMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFVV 152
Y+ LI SY + N A+ ++ M+ + D +++ + + +++ +
Sbjct: 402 YNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 153 KNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGLLD 208
G D F + +I G+ G L A +LF +MV + ++V+++ M+ + +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 209 EALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
AL L +DM+ AG +P ++ ++ VL L+
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLE 556
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 151 VVKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKMVGK----DVVSWSTMIRSYGRNGL 206
+ +NG DV L+ YG G A+++F M + +VV+++ +I +YG NG
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 207 LDEALDLLKDMRVAGVKPSEIAMISIV 233
L EA+++ + M G+KP+ +++ +++
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLL 467
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 16/161 (9%)
Query: 93 YSFLITSYIKNNCPENAVKIYTYMRRTDTEVDSFIVPSVLKACSLIPSFQLGEEVHDFV- 151
Y+ LI + + C +A ++ M V P V+ +LI F + V D +
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLM------VSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 152 -----VKNGFHGDVFVCNALIMMYGEGGSLGYARQLFDKM----VGKDVVSWSTMIRSYG 202
G GD F N LI Y + G L A+++F++M V D+V+++ ++
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 203 RNGLLDEALDLLKDMRVAGVKPSEIAMISIVHVLAELADLK 243
NG +++AL +++D++ + + I I+ L LK
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446