Miyakogusa Predicted Gene

Lj3g3v0580160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0580160.1 Non Chatacterized Hit- tr|I1KJI5|I1KJI5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.26,0,ELMO,Engulfment/cell motility, ELMO;
ELMO_CED12,Engulfment/cell motility, ELMO; CELL MOTILITY
PROTEI,CUFF.40991.1
         (264 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44770.1 | Symbols:  | ELMO/CED-12 family protein | chr2:1845...   441   e-124
AT3G60260.4 | Symbols:  | ELMO/CED-12 family protein | chr3:2227...   430   e-121
AT3G60260.2 | Symbols:  | ELMO/CED-12 family protein | chr3:2227...   430   e-121
AT3G60260.1 | Symbols:  | ELMO/CED-12 family protein | chr3:2227...   430   e-121
AT3G60260.3 | Symbols:  | ELMO/CED-12 family protein | chr3:2227...   401   e-112
AT1G67400.1 | Symbols:  | ELMO/CED-12 family protein | chr1:2524...   292   1e-79
AT1G03620.1 | Symbols:  | ELMO/CED-12 family protein | chr1:9043...   285   2e-77
AT3G03610.1 | Symbols:  | ELMO/CED-12 family protein | chr3:8694...   279   1e-75
AT3G43400.1 | Symbols:  | ELMO/CED-12 family protein | chr3:1533...   181   3e-46

>AT2G44770.1 | Symbols:  | ELMO/CED-12 family protein |
           chr2:18457817-18459886 FORWARD LENGTH=266
          Length = 266

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/266 (80%), Positives = 235/266 (88%), Gaps = 2/266 (0%)

Query: 1   MDDRGGSFVAVRRVPHGETCHS--NSNSAEAVAGSAAWLGKGLSCVCVQRRDSDASSSFD 58
           MDDR GSFVAVRR+  G    S  NS+SAEAV GSAAWLG+GLSCVC QRRDSDA+S+FD
Sbjct: 1   MDDREGSFVAVRRISQGLERGSVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFD 60

Query: 59  LTLAQEESLQRLQKRIDVPYDSSIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGK 118
           LT AQEE LQ LQ RIDV YDS+I  HQ+ALR LW  +FPEEELHGLISEQWKEMGWQGK
Sbjct: 61  LTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGK 120

Query: 119 DPSTDFRGGGFISLENFLFFSRNFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQM 178
           DPSTDFRGGGFISLEN L+F+RNF KSFQDLL KQ GDRSVWEYPFAVAG+N+TFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQM 180

Query: 179 LDLESVKPHTLVGATFVKLLAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTR 238
           LDLE+VKP T+VGATF+K L+ENESAFDLLYCIAFKLMD QWLSMRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 239 RQLEKELLLEDITQLEDLPSYKLLSR 264
           RQLE+EL+LEDI  LEDLPSY LL++
Sbjct: 241 RQLERELMLEDIMHLEDLPSYALLNQ 266


>AT3G60260.4 | Symbols:  | ELMO/CED-12 family protein |
           chr3:22274303-22276839 FORWARD LENGTH=266
          Length = 266

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/266 (77%), Positives = 231/266 (86%), Gaps = 2/266 (0%)

Query: 1   MDDRGGSFVAVRRVPHGETCHS--NSNSAEAVAGSAAWLGKGLSCVCVQRRDSDASSSFD 58
           MDDRGGSFVAVRR+  G    S  +S+SAE VAGSAAWLG+GLSCVCVQ RD D   SFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 59  LTLAQEESLQRLQKRIDVPYDSSIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGK 118
           LT AQEE LQRLQ RIDV YDSSI QHQ+AL+ LW  AFPEEELHG++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 119 DPSTDFRGGGFISLENFLFFSRNFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQM 178
           DPSTDFRGGGFISLEN L+F+R FPKSF  LL KQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 179 LDLESVKPHTLVGATFVKLLAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTR 238
           LDLE+VKP ++VG TF++ L+ NESAFDLLYCIAFKLMD QWLSMRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 239 RQLEKELLLEDITQLEDLPSYKLLSR 264
           RQLE+E+++EDIT LEDLPSY LLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266


>AT3G60260.2 | Symbols:  | ELMO/CED-12 family protein |
           chr3:22274303-22276839 FORWARD LENGTH=266
          Length = 266

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/266 (77%), Positives = 231/266 (86%), Gaps = 2/266 (0%)

Query: 1   MDDRGGSFVAVRRVPHGETCHS--NSNSAEAVAGSAAWLGKGLSCVCVQRRDSDASSSFD 58
           MDDRGGSFVAVRR+  G    S  +S+SAE VAGSAAWLG+GLSCVCVQ RD D   SFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 59  LTLAQEESLQRLQKRIDVPYDSSIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGK 118
           LT AQEE LQRLQ RIDV YDSSI QHQ+AL+ LW  AFPEEELHG++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 119 DPSTDFRGGGFISLENFLFFSRNFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQM 178
           DPSTDFRGGGFISLEN L+F+R FPKSF  LL KQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 179 LDLESVKPHTLVGATFVKLLAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTR 238
           LDLE+VKP ++VG TF++ L+ NESAFDLLYCIAFKLMD QWLSMRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 239 RQLEKELLLEDITQLEDLPSYKLLSR 264
           RQLE+E+++EDIT LEDLPSY LLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266


>AT3G60260.1 | Symbols:  | ELMO/CED-12 family protein |
           chr3:22274303-22276839 FORWARD LENGTH=266
          Length = 266

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/266 (77%), Positives = 231/266 (86%), Gaps = 2/266 (0%)

Query: 1   MDDRGGSFVAVRRVPHGETCHS--NSNSAEAVAGSAAWLGKGLSCVCVQRRDSDASSSFD 58
           MDDRGGSFVAVRR+  G    S  +S+SAE VAGSAAWLG+GLSCVCVQ RD D   SFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 59  LTLAQEESLQRLQKRIDVPYDSSIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGK 118
           LT AQEE LQRLQ RIDV YDSSI QHQ+AL+ LW  AFPEEELHG++S+QWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query: 119 DPSTDFRGGGFISLENFLFFSRNFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQM 178
           DPSTDFRGGGFISLEN L+F+R FPKSF  LL KQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 179 LDLESVKPHTLVGATFVKLLAENESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTR 238
           LDLE+VKP ++VG TF++ L+ NESAFDLLYCIAFKLMD QWLSMRASYM+FNTVMKSTR
Sbjct: 181 LDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNTVMKSTR 240

Query: 239 RQLEKELLLEDITQLEDLPSYKLLSR 264
           RQLE+E+++EDIT LEDLPSY LLS+
Sbjct: 241 RQLEREIMIEDITSLEDLPSYSLLSQ 266


>AT3G60260.3 | Symbols:  | ELMO/CED-12 family protein |
           chr3:22274645-22276839 FORWARD LENGTH=244
          Length = 244

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/238 (79%), Positives = 211/238 (88%)

Query: 27  AEAVAGSAAWLGKGLSCVCVQRRDSDASSSFDLTLAQEESLQRLQKRIDVPYDSSIVQHQ 86
           +E VAGSAAWLG+GLSCVCVQ RD D   SFDLT AQEE LQRLQ RIDV YDSSI QHQ
Sbjct: 7   SEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQ 66

Query: 87  DALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFSRNFPKSF 146
           +AL+ LW  AFPEEELHG++S+QWKEMGWQGKDPSTDFRGGGFISLEN L+F+R FPKSF
Sbjct: 67  EALKDLWKLAFPEEELHGIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSF 126

Query: 147 QDLLWKQEGDRSVWEYPFAVAGVNITFMLIQMLDLESVKPHTLVGATFVKLLAENESAFD 206
             LL KQ GDRSVWEYPFAVAG+NITFMLIQMLDLE+VKP ++VG TF++ L+ NESAFD
Sbjct: 127 HGLLRKQVGDRSVWEYPFAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFD 186

Query: 207 LLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRRQLEKELLLEDITQLEDLPSYKLLSR 264
           LLYCIAFKLMD QWLSMRASYM+FNTVMKSTRRQLE+E+++EDIT LEDLPSY LLS+
Sbjct: 187 LLYCIAFKLMDQQWLSMRASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSYSLLSQ 244


>AT1G67400.1 | Symbols:  | ELMO/CED-12 family protein |
           chr1:25248099-25250664 REVERSE LENGTH=281
          Length = 281

 Score =  292 bits (748), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 138/243 (56%), Positives = 185/243 (76%), Gaps = 2/243 (0%)

Query: 23  NSNSAEAVAGSA-AW-LGKGLSCVCVQRRDSDASSSFDLTLAQEESLQRLQKRIDVPYDS 80
           N+++ +A   S  +W + K L+CVC  R+ +      +LT  QEE L+RL+KR+   YD+
Sbjct: 39  NADAEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDA 98

Query: 81  SIVQHQDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFSR 140
           S   HQDALRALW+A +P+E+L  LIS+QWK MGWQGKDPSTDFRG GFISLEN LFF++
Sbjct: 99  SRPDHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAK 158

Query: 141 NFPKSFQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQMLDLESVKPHTLVGATFVKLLAE 200
            F  SFQ LL KQ G R+ WEYPFAVAGVNITFM++QMLDLE+ KP + +   F+++L+E
Sbjct: 159 TFSTSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSE 218

Query: 201 NESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRRQLEKELLLEDITQLEDLPSYK 260
           +E AFDLLYC+AF +MD QWL   A+YM+FN V++ TR QLE+EL+++D+ ++ED+PS+ 
Sbjct: 219 SEWAFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFS 278

Query: 261 LLS 263
           LLS
Sbjct: 279 LLS 281


>AT1G03620.1 | Symbols:  | ELMO/CED-12 family protein |
           chr1:904319-906013 REVERSE LENGTH=265
          Length = 265

 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 135/238 (56%), Positives = 176/238 (73%), Gaps = 4/238 (1%)

Query: 26  SAEAVAGSAAWLGKGLSCVCVQRRDSDASSSFDLTLAQEESLQRLQKRIDVPYDSSIVQH 85
           +A  + G+ +W+G          R  D +  + L+  QEE LQRLQ R+ VP+D +   H
Sbjct: 29  TATGMVGTRSWIG---GLFTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDH 85

Query: 86  QDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFSRNFPKS 145
           Q++L+ALWN AFP   L GL++EQWKEMGWQG +PSTDFRG GFI+LEN LF +R +P  
Sbjct: 86  QESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVC 145

Query: 146 FQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQMLDLE-SVKPHTLVGATFVKLLAENESA 204
           F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+ + KP  L G  F+KLL E+E A
Sbjct: 146 FRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDERA 205

Query: 205 FDLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRRQLEKELLLEDITQLEDLPSYKLL 262
           FD+LYCIAF +MD QWL+M ASYM+FN V+++TR QLE+EL L+DI +++DLP+Y LL
Sbjct: 206 FDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 263


>AT3G03610.1 | Symbols:  | ELMO/CED-12 family protein |
           chr3:869479-871687 FORWARD LENGTH=323
          Length = 323

 Score =  279 bits (714), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 133/239 (55%), Positives = 179/239 (74%), Gaps = 1/239 (0%)

Query: 27  AEAVAGSAAWLGKGLSCVCVQRRDSDASS-SFDLTLAQEESLQRLQKRIDVPYDSSIVQH 85
           A+ V GS + +G+ LS     +  +        L++ QEE L+ +++RI++P+D S ++H
Sbjct: 85  AKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPPPLSMLQEERLRNIKRRIEIPFDGSRMEH 144

Query: 86  QDALRALWNAAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFSRNFPKS 145
           QDALR LW  A+P+ EL  L SE WKEMGWQG DPSTDFRGGG+ISLEN +FF++ +P+S
Sbjct: 145 QDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPES 204

Query: 146 FQDLLWKQEGDRSVWEYPFAVAGVNITFMLIQMLDLESVKPHTLVGATFVKLLAENESAF 205
           FQ LL KQ+G R+ WEYPFAVAG+NI+FML QMLDL+S KP T+ G  F+  L E+E AF
Sbjct: 205 FQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFLEEDEMAF 264

Query: 206 DLLYCIAFKLMDHQWLSMRASYMDFNTVMKSTRRQLEKELLLEDITQLEDLPSYKLLSR 264
           D LYCIAF++MD QWL+ RASYM+FN V+KSTR QLE+EL L+D++ + DLP++ LL +
Sbjct: 265 DNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAFNLLYK 323


>AT3G43400.1 | Symbols:  | ELMO/CED-12 family protein |
           chr3:15332136-15333703 FORWARD LENGTH=213
          Length = 213

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 108/141 (76%), Gaps = 4/141 (2%)

Query: 95  AAFPEEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENFLFFSRNFPKSFQDLLWKQE 154
           + + +E+L  LIS+QWK MGWQ KDPSTDFRG GFISLEN  FF+    K+F  LL KQ 
Sbjct: 71  STYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENLRFFA----KTFSRLLKKQG 126

Query: 155 GDRSVWEYPFAVAGVNITFMLIQMLDLESVKPHTLVGATFVKLLAENESAFDLLYCIAFK 214
           G R+ WEYPFAVAGVNITFM++QMLDLE+ KP + +   F+++L+E+E AF LLYC+AF 
Sbjct: 127 GKRAAWEYPFAVAGVNITFMIMQMLDLEASKPRSFIRLVFLQMLSESEWAFGLLYCVAFV 186

Query: 215 LMDHQWLSMRASYMDFNTVMK 235
           +MD QWL   A+YM+FN V++
Sbjct: 187 VMDKQWLDKNATYMEFNDVLR 207