Miyakogusa Predicted Gene
- Lj3g3v0549570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0549570.1 tr|Q5W964|Q5W964_9BRYO PpPPR_98 protein
OS=Physcomitrella patens GN=PpPPR_98 PE=2 SV=1,24.38,3e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR,P,CUFF.40946.1
(655 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 688 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 465 e-131
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 460 e-129
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 450 e-126
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 445 e-125
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 444 e-124
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 444 e-124
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 442 e-124
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-124
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 441 e-123
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 439 e-123
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 434 e-121
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 433 e-121
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 431 e-121
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 427 e-120
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 427 e-119
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 425 e-119
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 420 e-117
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 417 e-117
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 417 e-116
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-115
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 411 e-115
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 410 e-114
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 407 e-113
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 406 e-113
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 405 e-113
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 404 e-112
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-108
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 388 e-108
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 385 e-107
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 384 e-106
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 378 e-105
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 377 e-104
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-104
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 373 e-103
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 368 e-102
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 363 e-100
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 3e-96
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 2e-91
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 310 2e-84
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 306 3e-83
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 296 3e-80
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 2e-79
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 288 1e-77
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 8e-76
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 6e-73
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 8e-72
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 9e-72
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 2e-71
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 5e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 265 8e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 256 3e-68
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 9e-68
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 3e-66
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 9e-65
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 242 6e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 241 1e-63
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 6e-62
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 233 3e-61
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 4e-61
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 6e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 229 3e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 5e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 4e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 219 4e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 9e-57
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 1e-56
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 1e-55
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 5e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 211 2e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 8e-49
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 9e-49
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 3e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 4e-46
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 181 1e-45
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 4e-43
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 7e-43
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 91 2e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 87 3e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 5e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 86 7e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 83 7e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 72 1e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 68 2e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 68 3e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 65 1e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 62 1e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 60 6e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 4e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 54 5e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 54 5e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 53 6e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/618 (56%), Positives = 442/618 (71%), Gaps = 18/618 (2%)
Query: 30 ISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLG 89
+S+D++ D+S + LLR S L + + DR Y LLK CT
Sbjct: 26 VSEDSE-----DESLKFPSNDLLLRTSSNDL------EGSYIPADRRFYNTLLKKCTVFK 74
Query: 90 KLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSM 149
L +GR+VH+H L R D+V+ N++L MYA+CG LE AR+VF++MP +D VTWT++
Sbjct: 75 LLIQGRIVHAHIL--QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTL 132
Query: 150 ITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH 209
I+GY+Q++R DAL+ F MLR G PNEFTLSS++K G Q+HG C K
Sbjct: 133 ISGYSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKC 190
Query: 210 GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX 269
GF NV VGS+L+D+Y R G + +AQ VFD L +N+VSWNALI
Sbjct: 191 GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES-RNDVSWNALIAGHARRSGTEKALE- 248
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
LF M R+G+ + F+Y++L + SS G LEQGKW+H +M+KSG KLV + GNTLL MY
Sbjct: 249 -LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMY 307
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
AKSGSI DARK+FDRL K DVVS NS+L YAQHGFGKEAV F++M R GI PN+I+FL
Sbjct: 308 AKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
S+LTACSH+GLLDEG Y++LM++ G+ P+ HY +VDLLGRAG L+RA+ FIE M IE
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIR 509
PTAAIW ALL A MHK E+GAYAA+ VFELDP G HV+L NIYAS GRW +AA +R
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVR 487
Query: 510 KMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTR 569
K MK+SG+KKEPACSWVEIEN++H+FV+ND HPQ+++I + WE++ +IKE+GYVPDT
Sbjct: 488 KKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTS 547
Query: 570 HVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIV 629
HV++ VDQ E+E+NLQYHSEK+ALAFALLNT PGSTI I KNIRVCGDCH+A+K + +V
Sbjct: 548 HVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVV 607
Query: 630 KREIIVRDTNRFHHFCDG 647
REIIVRDTNRFHHF D
Sbjct: 608 GREIIVRDTNRFHHFKDA 625
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/577 (41%), Positives = 361/577 (62%), Gaps = 23/577 (3%)
Query: 84 TCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDT 143
C G +++ ++V + + +VRD +V N+++ YA+ G ++ ARQ+FDE P +D
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRD-VVSWNTIITGYAQSGKIDEARQLFDESPVQDV 281
Query: 144 VTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVH 203
TWT+M++GY QN +A LF M NE + +++ + Y G ++
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM------PERNEVSWNAM------LAGYVQGERME 329
Query: 204 GCCWKHGF----CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
K F C NV ++++ YA+CG + EA+ +FD++ + ++ VSW A+I
Sbjct: 330 MA--KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQ 386
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
LF +M+REG + ++S+ L + + V +LE GK LHG ++K G +
Sbjct: 387 SGHSFEALR--LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
+VGN LL MY K GSI +A +F + D+VS N+M+ GY++HGFG+ A+ F+ M R+
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDR 438
G++P+D T +++L+ACSH GL+D+G +YF M Q +GV P HYA +VDLLGRAGLL+
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 439 AMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYAS 498
A + ++ M EP AAIWG LLGAS +H E+ AA K+F ++P SG +VLL+N+YAS
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYAS 624
Query: 499 AGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQE 558
+GRW + +R M+D G+KK P SW+EI+N H F D HP+KD+I E+L+
Sbjct: 625 SGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLR 684
Query: 559 IKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDC 618
+K+ GYV T VL V++ EKE ++YHSE+LA+A+ ++ S G IR++KN+RVC DC
Sbjct: 685 MKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDC 744
Query: 619 HSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
H+A+KY+ I R II+RD NRFHHF DG CSCGDYW
Sbjct: 745 HNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 214/522 (40%), Gaps = 77/522 (14%)
Query: 89 GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G LR G + L RD LV N ++ Y R +L AR++F+ MP +D +W +
Sbjct: 104 GYLRNGEFELARKLFDEMPERD-LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNT 162
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL----SSLVKCCGLIPSYGDGRQVHG 204
M++GYAQN DA +F M S + S + + C L S + V
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 205 CCWKHGFCD-----------------NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
C GF +V ++++ YA+ G + EA+ +FDE ++
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-SPVQDV 281
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
+W A++ LF KM E +++A+L +E K L
Sbjct: 282 FTWTAMV--SGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF 335
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
M R + + NT++ YA+ G IS+A+ +FD++ K D VS +M+ GY+Q G
Sbjct: 336 DVM--PCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP--------- 418
EA+ LF QM R+G N +F S L+ C+ L+ G++ + + G E
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 419 ----KVSHYAKIVDLL------------------GRAGLLDRAMSFIEGML---IEPTAA 453
K + DL R G + A+ F E M ++P A
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 454 IWGALLGASWMHKKIEMGA---YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRK 510
A+L A ++ G Y + + + P S + + ++ AG ++A N+ K
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP-NSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 511 MMKDSGLKKEP-ACSWVEIENSVHVFVSNDIAHPQKDKIIKM 551
M EP A W + + V + ++A DKI M
Sbjct: 571 NM-----PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 38/355 (10%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
D+ N + Y R G A +VF MP +V++ MI+GY +N A LF +M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM- 121
Query: 171 RGGSGSRPNEFTLSSLVKCCGLI--PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
P +S V G + + G R++ + C ++++ YA+
Sbjct: 122 -------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCS----WNTMLSGYAQN 170
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
G + +A++VFD + KN+VSWNAL+ LF RE + + +++
Sbjct: 171 GCVDDARSVFDRMPE-KNDVSWNALL--SAYVQNSKMEEACMLFK--SRENWALV--SWN 223
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
LL + + + M + R +V + NT++ YA+SG I +AR++FD
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSM--NVRDVVSW--NTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
DV + +M+ GY Q+ +EA LF +M E N++++ ++L AG + +GER
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAML-----AGYV-QGERME 329
Query: 409 QLMRQFGVEP--KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
F V P VS + ++ + G + A + + M + W A++
Sbjct: 330 MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-WAAMIAG 383
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/620 (39%), Positives = 371/620 (59%), Gaps = 44/620 (7%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR-------- 124
PD ++ +LK+CT + LR G VH + D DL N+++ MYA+
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC--DLYTGNALMNMYAKLLGMGSKI 160
Query: 125 ---------------CGD-------------LEHARQVFDEMPNKDTVTWTSMITGYAQN 156
GD ++ R+VF+ MP KD V++ ++I GYAQ+
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 157 ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVF 216
DAL + +M G + +P+ FTLSS++ G+++HG + G +V+
Sbjct: 221 GMYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 217 VGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ 276
+GSSLVDMYA+ + +++ VF L ++ +SWN+L+ LF +M
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGYVQNGRYNEALR--LFRQMV 335
Query: 277 REGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSIS 336
+S+++ + + + +L GK LHG++L+ G ++ + L+ MY+K G+I
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIK 395
Query: 337 DARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
ARK+FDR+ +D VS ++++G+A HG G EAV LF++M R G++PN + F+++LTACS
Sbjct: 396 AARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACS 455
Query: 397 HAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIW 455
H GL+DE YF M + +G+ ++ HYA + DLLGRAG L+ A +FI M +EPT ++W
Sbjct: 456 HVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVW 515
Query: 456 GALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDS 515
LL + +HK +E+ A+K+F +D GA+VL+ N+YAS GRWKE A +R M+
Sbjct: 516 STLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKK 575
Query: 516 GLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFV 575
GL+K+PACSW+E++N H FVS D +HP DKI + + + +++++ GYV DT VL V
Sbjct: 576 GLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDV 635
Query: 576 DQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIV 635
D+ K L HSE+LA+AF ++NT PG+TIR+ KNIR+C DCH A+K+++ I +REIIV
Sbjct: 636 DEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIV 695
Query: 636 RDTNRFHHFCDGFCSCGDYW 655
RD +RFHHF G CSCGDYW
Sbjct: 696 RDNSRFHHFNRGNCSCGDYW 715
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 192/431 (44%), Gaps = 53/431 (12%)
Query: 75 RALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQV 134
+AL + L+K T++ + + +H+ F+ I V+ +Y L A +
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI---VISIYTNLKLLHEALLL 61
Query: 135 FDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
F + + + W S+I + AL F +M SG P+ S++K C ++
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMR--ASGRCPDHNVFPSVLKSCTMMM 119
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA---VFDELGR-------- 243
G VHG + G +++ G++L++MYA+ +G + VFDE+ +
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 244 ------------------------WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
K+ VS+N +I +M RE
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL------RMVRE- 232
Query: 280 YGVTE-----FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
G T+ FT S++L S + +GK +HG++++ G Y+G++L+ MYAKS
Sbjct: 233 MGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 292
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
I D+ +VF RL D +S NS++ GY Q+G EA+ LF+QM+ ++P + F S++ A
Sbjct: 293 IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPA 352
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI 454
C+H L G++ + + G + + +VD+ + G + A + M + +
Sbjct: 353 CAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS- 411
Query: 455 WGALLGASWMH 465
W A++ +H
Sbjct: 412 WTAIIMGHALH 422
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 40/336 (11%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++PD +L ++ + +G+ +H + + + D D+ I +S++ MYA+ +E
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID--SDVYIGSSLVDMYAKSARIED 295
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+ +VF + +D ++W S++ GY QN R +AL LF M+ + +P SS++ C
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVT--AKVKPGAVAFSSVIPAC 353
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ + G+Q+HG + GF N+F+ S+LVDMY++CG + A+ +FD + +EVSW
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSW 412
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
A+I LF +M+R+G + + A+L + S VG +++ W
Sbjct: 413 TAII--MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEA-W----- 464
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
GY N++ +Y + + V D L+G A G +EA
Sbjct: 465 --------GYF-NSMTKVYGLNQELEHYAAVAD-------------LLGRA--GKLEEAY 500
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+M +EP + +LL++CS L+ E+
Sbjct: 501 NFISKMC---VEPTGSVWSTLLSSCSVHKNLELAEK 533
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/591 (40%), Positives = 357/591 (60%), Gaps = 13/591 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P R+ + +K C+ L + G+ H + + D+ + ++++ MY+ CG LE AR
Sbjct: 74 PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG--YQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT----LSSLVK 188
+VFDE+P ++ V+WTSMI GY N A+DA+ LF D+L + F L S++
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA--VFDELGRWKN 246
C +P+ G +H K GF V VG++L+D YA+ G G A A +FD++ K+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVD-KD 250
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKM-QREGYGVTEFTYSALLCSASSVGSLEQGKW 305
VS+N+++ +F ++ + + T S +L + S G+L GK
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFE--VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKC 308
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+H +++ G + VG +++ MY K G + ARK FDR+ +V S +M+ GY HG
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYA 424
+A+ LF M+ G+ PN ITF+S+L ACSHAGL EG R+F M+ +FGVEP + HY
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDLLGRAG L +A I+ M ++P + IW +LL A +HK +E+ + ++FELD
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSS 488
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
G ++LL++IYA AGRWK+ +R +MK+ GL K P S +E+ VHVF+ D HPQ
Sbjct: 489 NCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQ 548
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGS 604
++KI + +LN+++ E GYV +T V VD+ EKE+ L+ HSEKLA+AF ++NT PGS
Sbjct: 549 REKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS 608
Query: 605 TIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
T+ ++KN+RVC DCH+ +K ++ IV RE +VRD RFHHF DG CSCGDYW
Sbjct: 609 TVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 8/192 (4%)
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWN++I F+ M++ T ++ + + SS+ + GK H
Sbjct: 43 SWNSVIADLARSGDSAEALLA--FSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
G + +V + L+ MY+ G + DARKVFD + K ++VS SM+ GY +G +
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALD 160
Query: 369 AVVLFKQMLRDGIEPNDITFL------SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
AV LFK +L D + +D FL S+++ACS E + + G + VS
Sbjct: 161 AVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV 220
Query: 423 YAKIVDLLGRAG 434
++D + G
Sbjct: 221 GNTLLDAYAKGG 232
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 450 bits (1157), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/602 (39%), Positives = 371/602 (61%), Gaps = 9/602 (1%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
++ GL V + +E D A + C + GR VHS ++ R+D
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS-IGVKACFSREDRFC- 334
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
N++L MY++CGDL+ A+ VF EM ++ V++TSMI GYA+ A +A+ LF +M G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE--EG 392
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
P+ +T+++++ CC +G++VH ++ ++FV ++L+DMYA+CG + EA+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 236 AVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG-YGVTEFTYSALLCSA 294
VF E+ R K+ +SWN +I LF + E + E T + +L +
Sbjct: 453 LVFSEM-RVKDIISWNTIIGGYSKNCYANEALS--LFNLLLEEKRFSPDERTVACVLPAC 509
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCN 354
+S+ + ++G+ +HG+++++G +V N+L+ MYAK G++ A +FD + D+VS
Sbjct: 510 ASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-Q 413
M+ GY HGFGKEA+ LF QM + GIE ++I+F+SLL ACSH+GL+DEG R+F +MR +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
+EP V HYA IVD+L R G L +A FIE M I P A IWGALL +H +++
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
A+KVFEL+P +G +VL+ANIYA A +W++ +RK + GL+K P CSW+EI+ V+
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Query: 534 VFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLAL 593
+FV+ D ++P+ + I K+ + E GY P T++ L+ ++ EKE L HSEKLA+
Sbjct: 750 IFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAM 809
Query: 594 AFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGD 653
A ++++ G IR+ KN+RVCGDCH K+++ + +REI++RD+NRFH F DG CSC
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 654 YW 655
+W
Sbjct: 870 FW 871
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 214/453 (47%), Gaps = 22/453 (4%)
Query: 17 RHSVTLRRLWQTAISDDNDNVPELDKSYYIIDDRNLLRRS------KTGLHVLDLIDRGA 70
R V R +SD D++ D+S + D LRR + + +L + +
Sbjct: 34 RKYVIFNRASLRTVSDCVDSITTFDRS--VTDANTQLRRFCESGNLENAVKLLCVSGKWD 91
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++P R L +L+ C L++G+ V +F+ N V D + + + MY CGDL+
Sbjct: 92 IDP-RTLCS-VLQLCADSKSLKDGKEV-DNFIRGNGFVIDS-NLGSKLSLMYTNCGDLKE 147
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A +VFDE+ + + W ++ A++ ++ LF M+ SG + +T S + K
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM--SSGVEMDSYTFSCVSKSF 205
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ S G Q+HG K GF + VG+SLV Y + + A+ VFDE+ ++ +SW
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE-RDVISW 264
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N++I +F +M G + T ++ + + G+ +H
Sbjct: 265 NSII--NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+K+ NTLL MY+K G + A+ VF + VVS SM+ GYA+ G EAV
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ--FGVEPKVSHYAKIVD 428
LF++M +GI P+ T ++L C+ LLDEG+R + +++ G + VS+ ++D
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMD 440
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ + G + A M ++ + W ++G
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIIS-WNTIIGG 472
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 187/401 (46%), Gaps = 17/401 (4%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
VE D + + K+ + L + G +H L R+ + NS++ Y + ++
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVD 247
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
AR+VFDEM +D ++W S+I GY N A L +F ML SG + T+ S+
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV--SGIEIDLATIVSVFAG 305
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C GR VH K F ++L+DMY++CG L A+AVF E+ ++ VS
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVS 364
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
+ ++I LF +M+ EG +T +A+L + L++GK +H
Sbjct: 365 YTSMI--AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 422
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+ ++ +V N L+ MYAK GS+ +A VF + D++S N+++ GY+++ + EA
Sbjct: 423 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 370 VVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
+ LF +L + P++ T +L AC+ D+G + + G +VD
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAA----IWGALLGASWMH 465
+ + G L + ML + A+ W ++ MH
Sbjct: 543 MYAKCGAL-----LLAHMLFDDIASKDLVSWTVMIAGYGMH 578
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/689 (37%), Positives = 390/689 (56%), Gaps = 74/689 (10%)
Query: 35 DNVPELDK---SYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKL 91
D +P+ D + I+ +N+ + K + D++ G +EP + +L + +
Sbjct: 104 DQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG-IEPTQFTLTNVLASVAATRCM 162
Query: 92 REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD--------------- 136
G+ VHS + +R ++ + NS+L MYA+CGD A+ VFD
Sbjct: 163 ETGKKVHS--FIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 137 ----------------EMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
+M +D VTW SMI+G+ Q + AL +F MLR S P+
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS-PDR 279
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
FTL+S++ C + G+Q+H GF + V ++L+ MY+RCG + A+ + ++
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 241 LG--------------------------------RWKNEVSWNALIXXXXXXXXXXXXXX 268
G + ++ V+W A+I
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 269 XXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHM 328
LF M G +T +A+L ASS+ SL GK +HG +KSG V N L+ M
Sbjct: 400 --LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 329 YAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDIT 387
YAK+G+I+ A + FD + + D VS SM+I AQHG +EA+ LF+ ML +G+ P+ IT
Sbjct: 458 YAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 388 FLSLLTACSHAGLLDEGERYFQLMRQFG-VEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
++ + +AC+HAGL+++G +YF +M+ + P +SHYA +VDL GRAGLL A FIE M
Sbjct: 518 YVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM 577
Query: 447 LIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAA 506
IEP WG+LL A +HK I++G AA+++ L+P SGA+ LAN+Y++ G+W+EAA
Sbjct: 578 PIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAA 637
Query: 507 NIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVP 566
IRK MKD +KKE SW+E+++ VHVF D HP+K++I +K+ EIK++GYVP
Sbjct: 638 KIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
Query: 567 DTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVT 626
DT VL +++ KE L++HSEKLA+AF L++T +T+RIMKN+RVC DCH+A+K+++
Sbjct: 698 DTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFIS 757
Query: 627 LIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+V REIIVRDT RFHHF DGFCSC DYW
Sbjct: 758 KLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 205/468 (43%), Gaps = 77/468 (16%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
N+VL Y++ GD++ + FD++P +D+V+WT+MI GY + A+ + DM++ G
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK--EG 141
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
P +FTL++++ G++VH K G NV V +SL++MYA+CG A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 236 AVFD-----ELGRW-------------------------KNEVSWNALIXXXXXXXXXXX 265
VFD ++ W ++ V+WN++I
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMI--SGFNQRGYD 259
Query: 266 XXXXXLFAKMQREG-YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
+F+KM R+ FT +++L + +++ L GK +H H++ +G + G V N
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 325 LLHMYAKSGSISDARK---------------------------------VFDRLVKVDVV 351
L+ MY++ G + AR+ +F L DVV
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
+ +M++GY QHG EA+ LF+ M+ G PN T ++L+ S L G++
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMG 471
+ G VS ++ + +AG + A + + E W +++ A H E
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE-- 497
Query: 472 AYAAQKVFE--LDPFYSGAHVLLANIYAS---AGRWKEAANIRKMMKD 514
A ++FE L H+ ++++ AG + MMKD
Sbjct: 498 --EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 145/337 (43%), Gaps = 72/337 (21%)
Query: 178 PNEFTLSSLVKCCGLI----PSYGDGR----QVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
P +LS+L++ C + + +GR VH K G +V++ ++L+++Y++ G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 230 FLGEAQAVFDELG-----RW-------------------------KNEVSWNALIXXXXX 259
+ A+ +FDE+ W ++ VSW +I
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
+ M +EG T+FT + +L S ++ +E GK +H ++K G +
Sbjct: 124 IGQYHKAIR--VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLV-------------------------------KV 348
V N+LL+MYAK G A+ VFDR+V +
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERY 407
D+V+ NSM+ G+ Q G+ A+ +F +MLRD + P+ T S+L+AC++ L G++
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
+ G + ++ + R G ++ A IE
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/582 (38%), Positives = 356/582 (61%), Gaps = 12/582 (2%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y LL C LR+G+ VH+H + ++ +L Y +C LE AR+V DE
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMI--KTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP K+ V+WT+MI+ Y+Q + +AL +F +M+R S +PNEFT ++++ C G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR--SDGKPNEFTFATVLTSCIRASGLG 170
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G+Q+HG K + ++FVGSSL+DMYA+ G + EA+ +F+ L ++ VS A+I
Sbjct: 171 LGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE-RDVVSCTAIIAGY 229
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
+F ++ EG TY++LL + S + L+ GK H H+L+
Sbjct: 230 AQLGLDEEALE--MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
+ N+L+ MY+K G++S AR++FD + + +S N+ML+GY++HG G+E + LF+ ++
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR-LM 346
Query: 378 RDG--IEPNDITFLSLLTACSHAGLLDEGERYFQLM--RQFGVEPKVSHYAKIVDLLGRA 433
RD ++P+ +T L++L+ CSH + D G F M ++G +P HY IVD+LGRA
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRA 406
Query: 434 GLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLA 493
G +D A FI+ M +PTA + G+LLGA +H +++G +++ E++P +G +V+L+
Sbjct: 407 GRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILS 466
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWE 553
N+YASAGRW + N+R MM + KEP SW++ E ++H F +ND HP++++++ +
Sbjct: 467 NLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMK 526
Query: 554 KLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIR 613
+++ ++K+ GYVPD VL VD+ +KE L HSEKLAL F L+ T G IR+ KN+R
Sbjct: 527 EISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLR 586
Query: 614 VCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+C DCH+ K + + +RE+ +RD NRFH DG CSCGDYW
Sbjct: 587 ICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/548 (41%), Positives = 336/548 (61%), Gaps = 8/548 (1%)
Query: 110 DDLV-IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
D LV I +++ MYA+CG LE ARQ+FD M ++ V+W SMI Y QNE +A+++F
Sbjct: 268 DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQK 327
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
ML G +P + ++ + C + GR +H + G NV V +SL+ MY +C
Sbjct: 328 ML--DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
+ A ++F +L + + VSWNA+I F++M+ FTY
Sbjct: 386 KEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNY--FSQMRSRTVKPDTFTYV 442
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+++ + + + KW+HG +++S +V L+ MYAK G+I AR +FD + +
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
V + N+M+ GY HGFGK A+ LF++M + I+PN +TFLS+++ACSH+GL++ G + F
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 409 QLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
+M++ + +E + HY +VDLLGRAG L+ A FI M ++P ++GA+LGA +HK
Sbjct: 563 YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKN 622
Query: 468 IEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+ AA+++FEL+P G HVLLANIY +A W++ +R M GL+K P CS VE
Sbjct: 623 VNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
Query: 528 IENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYH 587
I+N VH F S AHP KI EKL IKE GYVPDT +++L V+ KE L H
Sbjct: 683 IKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT-NLVLGVENDVKEQLLSTH 741
Query: 588 SEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDG 647
SEKLA++F LLNT+ G+TI + KN+RVC DCH+A KY++L+ REI+VRD RFHHF +G
Sbjct: 742 SEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNG 801
Query: 648 FCSCGDYW 655
CSCGDYW
Sbjct: 802 ACSCGDYW 809
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 196/395 (49%), Gaps = 8/395 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
VEP + LLK C +LR G+ +H LL DL + MYA+C +
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHG--LLVKSGFSLDLFAMTGLENMYAKCRQVNE 188
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFD MP +D V+W +++ GY+QN A AL + M +P+ T+ S++
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE--ENLKPSFITIVSVLPAV 246
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G+++HG + GF V + ++LVDMYA+CG L A+ +FD + +N VSW
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE-RNVVSW 305
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N++I +F KM EG T+ + L + + +G LE+G+++H
Sbjct: 306 NSMI--DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
++ G V N+L+ MY K + A +F +L +VS N+M++G+AQ+G +A+
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
F QM ++P+ T++S++TA + + + ++ + ++ V +VD+
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G + A I M+ E W A++ H
Sbjct: 484 AKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 203/398 (51%), Gaps = 14/398 (3%)
Query: 81 LLKTCTKLGKLREG-RLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
LL+ C+ L +LR+ LV + L Q + Q ++ ++ R G ++ A +VF+ +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQ------EHFFQTKLVSLFCRYGSVDEAARVFEPID 96
Query: 140 NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
+K V + +M+ G+A+ AL F M P + + L+K CG G
Sbjct: 97 SKLNVLYHTMLKGFAKVSDLDKALQFFVRMRY--DDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
+++HG K GF ++F + L +MYA+C + EA+ VFD + ++ VSWN ++
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE-RDLVSWNTIV--AGY 211
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
+ M E + T ++L + S++ + GK +HG+ ++SG +
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
+ L+ MYAK GS+ AR++FD +++ +VVS NSM+ Y Q+ KEA+++F++ML +
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G++P D++ + L AC+ G L+ G +L + G++ VS ++ + + +D A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 440 MSFIEGMLIEPTAAIWGAL-LGASWMHKKIEMGAYAAQ 476
S G L T W A+ LG + + I+ Y +Q
Sbjct: 392 ASMF-GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 134/281 (47%), Gaps = 4/281 (1%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
RQ+ +K+G F + LV ++ R G + EA VF+ + N + L
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML---KGF 110
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
F +M+ + + ++ LL L GK +HG ++KSG L
Sbjct: 111 AKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDL 170
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
+ L +MYAK +++ARKVFDR+ + D+VS N+++ GY+Q+G + A+ + K M +
Sbjct: 171 FAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
++P+ IT +S+L A S L+ G+ + G + V+ +VD+ + G L+ A
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETA 290
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE 480
+GML E W +++ A ++ + QK+ +
Sbjct: 291 RQLFDGML-ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/599 (39%), Positives = 360/599 (60%), Gaps = 18/599 (3%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
VEPD +L C+ L LR G+ +H+ + L+N + ++ + ++++ MY C +
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHA-YALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
R+VFD M ++ W +MI GY+QNE +AL+LF M +G N T++ +V
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM-EESAGLLANSTTMAGVVPA 414
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C ++ +HG K G + FV ++L+DMY+R G + A +F ++ ++ V+
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVT 473
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQ-----------REGYGVTEFTYSALLCSASSVG 298
WN +I L KMQ R T +L S +++
Sbjct: 474 WNTMITGYVFSEHHEDALL--LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
+L +GK +H + +K+ VG+ L+ MYAK G + +RKVFD++ + +V++ N +++
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVE 417
Y HG G+EA+ L + M+ G++PN++TF+S+ ACSH+G++DEG R F +M+ +GVE
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE-PTAAIWGALLGASWMHKKIEMGAYAAQ 476
P HYA +VDLLGRAG + A + M + A W +LLGAS +H +E+G AAQ
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFV 536
+ +L+P + +VLLANIY+SAG W +A +R+ MK+ G++KEP CSW+E + VH FV
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 537 SNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFA 596
+ D +HPQ +K+ E L + +++ GYVPDT VL V++ EKE+ L HSEKLA+AF
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831
Query: 597 LLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+LNTSPG+ IR+ KN+RVC DCH A K+++ IV REII+RD RFH F +G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 214/476 (44%), Gaps = 32/476 (6%)
Query: 5 MYPITTRVKLVQRHS-VTLRRLWQTAISDDNDNVPELDKSYYIIDDR------------- 50
++P +++ RH L R T+ ++D + S +I R
Sbjct: 14 IFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKV 73
Query: 51 --NLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDV 108
NLLR + L +D+I G ++PD + LLK L + G+ +H+H V
Sbjct: 74 RSNLLREAV--LTYVDMIVLG-IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGV 130
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
D + + N+++ +Y +CGD +VFD + ++ V+W S+I+ E+ AL F
Sbjct: 131 -DSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIP---SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
ML P+ FTL S+V C +P G+QVH + G N F+ ++LV MY
Sbjct: 190 ML--DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMY 246
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
+ G L ++ + G ++ V+WN ++ +M EG EF
Sbjct: 247 GKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEY--LREMVLEGVEPDEF 303
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGR-KLVGYVGNTLLHMYAKSGSISDARKVFDR 344
T S++L + S + L GK LH + LK+G +VG+ L+ MY + R+VFD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDE 403
+ + N+M+ GY+Q+ KEA++LF M G+ N T ++ AC +G
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 404 GERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
E + + G++ ++D+ R G +D AM I G + + W ++
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR-IFGKMEDRDLVTWNTMI 478
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 357/604 (59%), Gaps = 22/604 (3%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV--IQNSVLF 120
LD++ G E D+ + C +L L G+ +HS +R LV ++ S++
Sbjct: 258 LDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSW------AIRSGLVDDVECSLVD 310
Query: 121 MYARC---GDLEHARQVFDEMPNKDTVTWTSMITGYAQN-ERAVDALVLFPDMLRGGSGS 176
MYA+C G ++ R+VFD M + ++WT++ITGY +N A +A+ LF +M+ G
Sbjct: 311 MYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH-V 369
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
PN FT SS K CG + G+QV G +K G N V +S++ M+ + + +AQ
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
F+ L KN VS+N + L +++ GV+ FT+++LL ++
Sbjct: 430 AFESLSE-KNLVSYNTFLDGTCRNLNFEQAFK--LLSEITERELGVSAFTFASLLSGVAN 486
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
VGS+ +G+ +H ++K G V N L+ MY+K GSI A +VF+ + +V+S SM
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FG 415
+ G+A+HGF + F QM+ +G++PN++T++++L+ACSH GL+ EG R+F M +
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 416 VEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAA 475
++PK+ HYA +VDLL RAGLL A FI M + +W LGA +H E+G AA
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 476 QKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVF 535
+K+ ELDP A++ L+NIYA AG+W+E+ +R+ MK+ L KE CSW+E+ + +H F
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKF 726
Query: 536 VSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTR---HVLLFVDQHEKELNLQY-HSEKL 591
D AHP +I ++L EIK GYVPDT H L + ++ L Y HSEK+
Sbjct: 727 YVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKI 786
Query: 592 ALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSC 651
A+AF L++TS +R+ KN+RVCGDCH+AMKY++ + REI++RD NRFHHF DG CSC
Sbjct: 787 AVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSC 846
Query: 652 GDYW 655
DYW
Sbjct: 847 NDYW 850
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 228/496 (45%), Gaps = 28/496 (5%)
Query: 47 IDDRNLLRRSKTG-----LHVLDLIDRGAVEP-DRALYQRLLKTCTKLGKLREGRLVHSH 100
+ DR +LR G + LDL+ R + P D + LLK+C + R G+LVH+
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87
Query: 101 FLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM---PNKDTVTWTSMITGYAQNE 157
+ D+ D V+ NS++ +Y++ GD A VF+ M +D V+W++M+ Y N
Sbjct: 88 LI--EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 158 RAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG-FCDNVF 216
R +DA+ +F + L G PN++ +++++ C G GR G K G F +V
Sbjct: 146 RELDAIKVFVEFLE--LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 217 VGSSLVDMYARC-GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
VG SL+DM+ + A VFD++ N V+W +I F M
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSEL-NVVTWTLMI--TRCMQMGFPREAIRFFLDM 260
Query: 276 QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAK---S 332
G+ +FT S++ + + + +L GK LH ++SG LV V +L+ MYAK
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSAD 318
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQH-GFGKEAVVLFKQMLRDG-IEPNDITFLS 390
GS+ D RKVFDR+ V+S +++ GY ++ EA+ LF +M+ G +EPN TF S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 391 LLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
AC + G++ + G+ S ++ + ++ ++ A E L E
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES-LSEK 437
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG-AHVLLANIYASAGRWKEAANIR 509
+ L + + E ++ E + S L + A+ G ++ I
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 510 KMMKDSGLK-KEPACS 524
+ GL +P C+
Sbjct: 498 SQVVKLGLSCNQPVCN 513
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 17/403 (4%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
++ ++ G V P+ Y +++ C+ + GR V FL++ D+ + S++ M+
Sbjct: 155 VEFLELGLV-PNDYCYTAVIRACSNSDFVGVGR-VTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 123 ARC-GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
+ E+A +VFD+M + VTWT MIT Q +A+ F DM+ SG ++F
Sbjct: 213 VKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL--SGFESDKF 270
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC---GFLGEAQAVF 238
TLSS+ C + + G+Q+H + G D+ V SLVDMYA+C G + + + VF
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 328
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY-GVTEFTYSALLCSASSV 297
D + + +SW ALI LF++M +G+ FT+S+ + ++
Sbjct: 329 DRMED-HSVMSWTALI-TGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNL 386
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
GK + G K G V N+++ M+ KS + DA++ F+ L + ++VS N+ L
Sbjct: 387 SDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFL 446
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
G ++ ++A L ++ + + TF SLL+ ++ G + +GE+ + + G+
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 418 PKVSHYAKIVDLLGRAGLLD---RAMSFIEGM-LIEPTAAIWG 456
++ + + G +D R +F+E +I T+ I G
Sbjct: 507 CNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 233/590 (39%), Positives = 364/590 (61%), Gaps = 10/590 (1%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGK-LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCG 126
R ++PD+ +LK + L + L + VH H + N +V D V +++ Y+R
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVSDSFV-STALIDAYSRNR 466
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
++ A +F E N D V W +M+ GY Q+ L LF M + G R ++FTL+++
Sbjct: 467 CMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK--QGERSDDFTLATV 523
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
K CG + + G+QVH K G+ +++V S ++DMY +CG + AQ FD + +
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PD 582
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
+V+W +I +F++M+ G EFT + L ++S + +LEQG+ +
Sbjct: 583 DVAWTTMISGCIENGEEERAFH--VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H + LK +VG +L+ MYAK GSI DA +F R+ +++ + N+ML+G AQHG G
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAK 425
KE + LFKQM GI+P+ +TF+ +L+ACSH+GL+ E ++ + M +G++P++ HY+
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSC 760
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
+ D LGRAGL+ +A + IE M +E +A+++ LL A + E G A K+ EL+P
Sbjct: 761 LADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLD 820
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQK 545
S A+VLL+N+YA+A +W E R MMK +KK+P SW+E++N +H+FV +D ++ Q
Sbjct: 821 SSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQT 880
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGST 605
+ I + + + ++IK+ GYVP+T L+ V++ EKE L YHSEKLA+AF LL+T P +
Sbjct: 881 ELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTP 940
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
IR++KN+RVCGDCH+AMKY+ + REI++RD NRFH F DG CSCGDYW
Sbjct: 941 IRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 11/253 (4%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L + L+ + D + KTC L + +G+ VH++ + D+ DL + + +L
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL--DLWVSSGIL 559
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
MY +CGD+ A+ FD +P D V WT+MI+G +N A +F M G P+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL--MGVLPD 617
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
EFT+++L K + + GRQ+H K ++ FVG+SLVDMYA+CG + +A +F
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
+ N +WNA++ LF +M+ G + T+ +L + S G
Sbjct: 678 RI-EMMNITAWNAML--VGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 300 LEQG----KWLHG 308
+ + + +HG
Sbjct: 735 VSEAYKHMRSMHG 747
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 57/341 (16%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++ + V R +LK C G + H + D D + +++ +Y +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD--GDEFVAGALVNIYLK 192
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQ---NERAVDALVLFPDMLRGGSGSRPNEF 181
G ++ + +F+EMP +D V W M+ Y + E A+D F SG PNE
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-----SSGLNPNEI 247
Query: 182 TLSSLVKC------CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
TL L + G + S+ +G SS+ ++ R L E
Sbjct: 248 TLRLLARISGDDSDAGQVKSFANGND----------------ASSVSEIIFRNKGLSE-- 289
Query: 236 AVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSAS 295
+ + ++AL+ FA M + T+ +L +A
Sbjct: 290 --------YLHSGQYSALLK---------------CFADMVESDVECDQVTFILMLATAV 326
Query: 296 SVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNS 355
V SL G+ +H LK G L+ V N+L++MY K AR VFD + + D++S NS
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
++ G AQ+G EAV LF Q+LR G++P+ T S+L A S
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 14/181 (7%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLL--QNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
L+ L G+ H+ L +NP+ + N+++ MY++CG L +AR+VFD+M
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPE----RFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 139 PNKDTVTWTSMITGYAQNERAV-----DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
P++D V+W S++ YAQ+ V A +LF +LR + TLS ++K C
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR-ILRQDV-VYTSRMTLSPMLKLCLHS 158
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
HG K G + FV +LV++Y + G + E + +F+E+ +++ V WN +
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLM 217
Query: 254 I 254
+
Sbjct: 218 L 218
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 216 FVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX---XXXXXXXXXLF 272
F+ ++L+ MY++CG L A+ VFD++ ++ VSWN+++ LF
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPD-RDLVSWNSILAAYAQSSECVVENIQQAFLLF 133
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
++++ + T S +L G + + HG+ K G +V L+++Y K
Sbjct: 134 RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
G + + + +F+ + DVV N ML Y + GF +EA+ L G+ PN+IT
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 11/188 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
HV + V PD L K + L L +GR +H++ L N +D + S+
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN--CTNDPFVGTSL 659
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ MYA+CG ++ A +F + + W +M+ G AQ+ + L LF M G +P
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM--KSLGIKP 717
Query: 179 NEFTLSSLVKCC---GLIP-SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
++ T ++ C GL+ +Y R +HG +G + S L D R G + +A
Sbjct: 718 DKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 235 QAVFDELG 242
+ + + +
Sbjct: 775 ENLIESMS 782
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
L +A + L GK H +L ++ N L+ MY+K GS++ AR+VFD++ D
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 350 VVSCNSMLIGYAQHGFG-----KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
+VS NS+L YAQ ++A +LF+ + +D + + +T +L C H+G +
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
E + + G++ +V++ + G + E M +W +L A
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKA--- 220
Query: 465 HKKIEMG 471
+EMG
Sbjct: 221 --YLEMG 225
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 362/593 (61%), Gaps = 10/593 (1%)
Query: 66 IDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
+ G D LL CT+ G G +HS+ + + +L + N ++ +YA
Sbjct: 238 LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG--LESELFVSNKLIDLYAEF 295
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
G L ++VFD M +D ++W S+I Y NE+ + A+ LF +M S +P+ TL S
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL--SRIQPDCLTLIS 353
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHG-FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
L + R V G + G F +++ +G+++V MYA+ G + A+AVF+ L
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN- 412
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG-YGVTEFTYSALLCSASSVGSLEQG 303
+ +SWN +I ++ M+ EG + T+ ++L + S G+L QG
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIE--MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
LHG +LK+G L +V +L MY K G + DA +F ++ +V+ V N+++ + H
Sbjct: 471 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 530
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSH 422
G G++AV+LFK+ML +G++P+ ITF++LL+ACSH+GL+DEG+ F++M+ +G+ P + H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
Y +VD+ GRAG L+ A+ FI+ M ++P A+IWGALL A +H +++G A++ +FE++
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 650
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAH 542
P + G HVLL+N+YASAG+W+ IR + GL+K P S +E++N V VF + + H
Sbjct: 651 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Query: 543 PQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSP 602
P +++ + L ++K IGYVPD R VL V+ EKE L HSE+LA+AFAL+ T
Sbjct: 711 PMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPA 770
Query: 603 GSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+TIRI KN+RVCGDCHS K+++ I +REIIVRD+NRFHHF +G CSCGDYW
Sbjct: 771 KTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 193/399 (48%), Gaps = 19/399 (4%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ PD + +LK C + +G +H L D+ + S++ +Y+R +
Sbjct: 148 GLTPDYRTFPSVLKACRTV---IDGNKIHC--LALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP-NEFTLSSLVK 188
+AR +FDEMP +D +W +MI+GY Q+ A +AL L +G R + T+ SL+
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-------SNGLRAMDSVTVVSLLS 255
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C + G +H KHG +FV + L+D+YA G L + Q VFD + ++ +
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM-YVRDLI 314
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWN++I LF +M+ T +L S +G + + + G
Sbjct: 315 SWNSII--KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 309 HMLKSGRKLVGY-VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
L+ G L +GN ++ MYAK G + AR VF+ L DV+S N+++ GYAQ+GF
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 368 EAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
EA+ ++ M +G I N T++S+L ACS AG L +G + + + G+ V +
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
D+ G+ G L+ A+S + + W L+ H
Sbjct: 493 ADMYGKCGRLEDALSLFY-QIPRVNSVPWNTLIACHGFH 530
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 175/363 (48%), Gaps = 23/363 (6%)
Query: 81 LLKTCTKL--GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
L + CT L K RLV S +QN + I ++ +Y G++ AR FD +
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSK-QIQN------VCISAKLVNLYCYLGNVALARHTFDHI 112
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
N+D W MI+GY + + + + F + SG P+ T S++K C + D
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCF-SLFMLSSGLTPDYRTFPSVLKACRTVI---D 168
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G ++H K GF +V+V +SL+ +Y+R +G A+ +FDE+ ++ SWNA+I
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGYC 227
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
+ + T +LL + + G +G +H + +K G +
Sbjct: 228 QSGNAKEAL------TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
+V N L+ +YA+ G + D +KVFDR+ D++S NS++ Y + A+ LF++M
Sbjct: 282 LFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 341
Query: 379 DGIEPNDITFLSLLTACSHAGLLD--EGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL 436
I+P+ +T +SL + S G + + F L + + +E ++ +V + + GL+
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLV 400
Query: 437 DRA 439
D A
Sbjct: 401 DSA 403
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 14/250 (5%)
Query: 214 NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXX-XXLF 272
NV + + LV++Y G + A+ FD + ++ +WN +I LF
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQN-RDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
M G T+ ++L + +V G +H LK G YV +L+H+Y++
Sbjct: 144 --MLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND-ITFLSL 391
++ +AR +FD + D+ S N+M+ GY Q G KEA+ L +G+ D +T +SL
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSL 253
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT 451
L+AC+ AG + G + G+E ++ K++DL G L + M +
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 452 AAIWGALLGA 461
+ W +++ A
Sbjct: 314 IS-WNSIIKA 322
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
+L+ K LH ++ S + + L+++Y G+++ AR FD + DV + N M+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 359 GYAQHGFGKEAVVLFKQ-MLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
GY + G E + F ML G+ P+ TF S+L AC + +G + L +FG
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
V A ++ L R + A + M + + W A++
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS-WNAMI 223
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/625 (36%), Positives = 376/625 (60%), Gaps = 21/625 (3%)
Query: 45 YIIDDRNLLRRSKTG-----LHVLDLIDRGAVEP--------DRALYQRLLKTCTKLGKL 91
++I + L RRS T + VL D+ V P +R L +L+ C + G +
Sbjct: 18 FLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAV 77
Query: 92 REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMIT 151
E + H + D+ D+ + N ++ Y++CG +E ARQVFD M + V+W +MI
Sbjct: 78 MEAKACHGKII--RIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135
Query: 152 GYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF 211
Y +N +AL +F +M G + +EFT+SS++ CG+ + +++H K
Sbjct: 136 LYTRNRMESEALDIFLEM--RNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXL 271
N++VG++L+D+YA+CG + +A VF+ + + K+ V+W++++ L
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESM-QDKSSVTWSSMVAGYVQNKNYEEALL--L 250
Query: 272 FAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAK 331
+ + QR +FT S+++C+ S++ +L +GK +H + KSG +V ++ + MYAK
Sbjct: 251 YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAK 310
Query: 332 SGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
GS+ ++ +F + + ++ N+++ G+A+H KE ++LF++M +DG+ PN++TF SL
Sbjct: 311 CGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSL 370
Query: 392 LTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
L+ C H GL++EG R+F+LMR +G+ P V HY+ +VD+LGRAGLL A I+ + +P
Sbjct: 371 LSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDP 430
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRK 510
TA+IWG+LL + ++K +E+ AA+K+FEL+P +G HVLL+NIYA+ +W+E A RK
Sbjct: 431 TASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRK 490
Query: 511 MMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRH 570
+++D +KK SW++I++ VH F + HP+ +I + L + ++ GY P H
Sbjct: 491 LLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEH 550
Query: 571 VLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVK 630
L V+ +KE L HSEKLAL F L+ S +RIMKN+R+C DCH MK ++ +
Sbjct: 551 ELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATR 610
Query: 631 REIIVRDTNRFHHFCDGFCSCGDYW 655
R IIVRD NRFHHF DG CSCGD+W
Sbjct: 611 RFIIVRDVNRFHHFSDGHCSCGDFW 635
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/615 (38%), Positives = 363/615 (59%), Gaps = 37/615 (6%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFL------------------LQNPDVRD---- 110
P+ + +LK+C K +EG+ +H H L +QN + D
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 111 -------DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDAL 163
D+V +++ YA G +E+A+++FDE+P KD V+W +MI+GYA+ +AL
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
LF DM++ + RP+E T+ ++V C S GRQVH HGF N+ + ++L+D
Sbjct: 252 ELFKDMMK--TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 224 MYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+Y++CG L A +F+ L +K+ +SWN LI LF +M R G
Sbjct: 310 LYSKCGELETACGLFERL-PYKDVISWNTLIGGYTHMNLYKEALL--LFQEMLRSGETPN 366
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLK--SGRKLVGYVGNTLLHMYAKSGSISDARKV 341
+ T ++L + + +G+++ G+W+H ++ K G + +L+ MYAK G I A +V
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F+ ++ + S N+M+ G+A HG + LF +M + GI+P+DITF+ LL+ACSH+G+L
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486
Query: 402 DEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
D G F+ M Q + + PK+ HY ++DLLG +GL A I M +EP IW +LL
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546
Query: 461 ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE 520
A MH +E+G A+ + +++P G++VLL+NIYASAGRW E A R ++ D G+KK
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606
Query: 521 PACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEK 580
P CS +EI++ VH F+ D HP+ +I M E++ +++ G+VPDT VL +++ K
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWK 666
Query: 581 ELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNR 640
E L++HSEKLA+AF L++T PG+ + I+KN+RVC +CH A K ++ I KREII RD R
Sbjct: 667 EGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 726
Query: 641 FHHFCDGFCSCGDYW 655
FHHF DG CSC DYW
Sbjct: 727 FHHFRDGVCSCNDYW 741
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 201/431 (46%), Gaps = 59/431 (13%)
Query: 81 LLKTCTKLGKLREGRLVHSHFL---LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
LL C L LR ++H+ + L N + +I+ +L + L +A VF
Sbjct: 39 LLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFE--GLPYAISVFKT 93
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
+ + + W +M G+A + V AL L+ M+ G PN +T ++K C ++
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 198 DGRQVHGCCWKHGFCD-NVFVGSSLVDM-------------------------------Y 225
+G+Q+HG K G CD +++V +SL+ M Y
Sbjct: 152 EGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
A G++ AQ +FDE+ K+ VSWNA+I LF M + E
Sbjct: 211 ASRGYIENAQKLFDEIPV-KDVVSWNAMI--SGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 286 TYSALLCSASSVGSLEQGK----WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
T ++ + + GS+E G+ W+ H S K+V N L+ +Y+K G + A +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV----NALIDLYSKCGELETACGL 323
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F+RL DV+S N+++ GY KEA++LF++MLR G PND+T LS+L AC+H G +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 402 DEGERYFQLM---RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
D G R+ + R GV S ++D+ + G ++ A +L + ++ W A+
Sbjct: 384 DIG-RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAM 441
Query: 459 LGASWMHKKIE 469
+ MH + +
Sbjct: 442 IFGFAMHGRAD 452
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K L + + R P+ +L C LG + GR +H + + V + ++
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT 408
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
S++ MYA+CGD+E A QVF+ + +K +W +MI G+A + RA + LF M + G
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK--IGI 466
Query: 177 RPNEFTLSSLVKCC 190
+P++ T L+ C
Sbjct: 467 QPDDITFVGLLSAC 480
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/614 (37%), Positives = 353/614 (57%), Gaps = 14/614 (2%)
Query: 43 SYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFL 102
+Y ++DD LR S + + + P++ Y +LKTC +LG L G +HS +
Sbjct: 464 AYGLLDD---LRNS---FRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 103 LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDA 162
N + + + + ++ MYA+ G L+ A + KD V+WT+MI GY Q A
Sbjct: 518 KTNFQL--NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 163 LVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
L F ML G R +E L++ V C + + +G+Q+H GF ++ ++LV
Sbjct: 576 LTTFRQML--DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
+Y+RCG + E+ F++ N ++WNAL+ +F +M REG
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEALR--VFVRMNREGIDN 690
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
FT+ + + +AS +++QGK +H + K+G V N L+ MYAK GSISDA K F
Sbjct: 691 NNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF 750
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+ + VS N+++ Y++HGFG EA+ F QM+ + PN +T + +L+ACSH GL+D
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 403 EGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+G YF+ M ++G+ PK HY +VD+L RAGLL RA FI+ M I+P A +W LL A
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Query: 462 SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEP 521
+HK +E+G +AA + EL+P S +VLL+N+YA + +W R+ MK+ G+KKEP
Sbjct: 871 CVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEP 930
Query: 522 ACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKE 581
SW+E++NS+H F D HP D+I + ++ L + EIGYV D +L + +K+
Sbjct: 931 GQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 990
Query: 582 LNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRF 641
+ HSEKLA++F LL+ I +MKN+RVC DCH+ +K+V+ + REIIVRD RF
Sbjct: 991 PIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRF 1050
Query: 642 HHFCDGFCSCGDYW 655
HHF G CSC DYW
Sbjct: 1051 HHFEGGACSCKDYW 1064
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 199/421 (47%), Gaps = 16/421 (3%)
Query: 43 SYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKL-GKLREGRLVHSHF 101
S YI +D + + +D ++ + P+ + LL+ C K G L EGR +HS
Sbjct: 58 SVYISEDESFQEKR------IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQI 111
Query: 102 LLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVD 161
L D + + + Y GDL A +VFDEMP + TW MI A +
Sbjct: 112 LKLGLD--SNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGE 169
Query: 162 ALVLFPDMLRGGSGSRPNEFTLSSLVKCC-GLIPSYGDGRQVHGCCWKHGFCDNVFVGSS 220
LF M+ PNE T S +++ C G ++ Q+H G D+ V +
Sbjct: 170 VFGLFVRMV--SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP 227
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
L+D+Y+R GF+ A+ VFD L R K+ SW A+I LF M G
Sbjct: 228 LIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISGLSKNECEAEAIR--LFCDMYVLGI 284
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
T + +S++L + + SLE G+ LHG +LK G YV N L+ +Y G++ A
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+F + + D V+ N+++ G +Q G+G++A+ LFK+M DG+EP+ T SL+ ACS G
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
L G++ + G +++L + ++ A+ + +E +W +L
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE-NVVLWNVMLV 463
Query: 461 A 461
A
Sbjct: 464 A 464
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 180/392 (45%), Gaps = 8/392 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ P + +L C K+ L G +H L+ D + N+++ +Y G+L
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHG--LVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
A +F M +D VT+ ++I G +Q A+ LF M G P+ TL+SLV
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHL--DGLEPDSNTLASLVVA 398
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C + G+Q+H K GF N + +L+++YA+C + A F E +N V
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET-EVENVVL 457
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
WN ++ +F +MQ E ++TY ++L + +G LE G+ +H
Sbjct: 458 WNVMLVAYGLLDDLRNSFR--IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
++K+ +L YV + L+ MYAK G + A + R DVVS +M+ GY Q+ F +A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
+ F+QML GI +++ + ++AC+ L EG++ G + +V L
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
R G ++ + E A W AL+
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIA-WNALVSG 666
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/594 (39%), Positives = 345/594 (58%), Gaps = 13/594 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
DLI+ D +L +L +LR G +HS L + + +Y+
Sbjct: 210 DLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS--LATKTGCYSHDYVLTGFISLYS 267
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+CG ++ +F E D V + +MI GY N +L LF +++ SG+R TL
Sbjct: 268 KCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML--SGARLRSSTL 325
Query: 184 SSLVKCCG-LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
SLV G L+ Y +HG C K F + V ++L +Y++ + A+ +FDE
Sbjct: 326 VSLVPVSGHLMLIYA----IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-S 380
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
K+ SWNA+I LF +MQ+ + T + +L + + +G+L
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAIS--LFREMQKSEFSPNPVTITCILSACAQLGALSL 438
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
GKW+H + + + YV L+ MYAK GSI++AR++FD + K + V+ N+M+ GY
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ-LMRQFGVEPKVS 421
HG G+EA+ +F +ML GI P +TFL +L ACSHAGL+ EG+ F ++ ++G EP V
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
HYA +VD+LGRAG L RA+ FIE M IEP +++W LLGA +HK + ++K+FEL
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 482 DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIA 541
DP G HVLL+NI+++ + +AA +R+ K L K P + +EI + HVF S D +
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 678
Query: 542 HPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTS 601
HPQ +I + EKL +++E GY P+T L V++ E+EL ++ HSE+LA+AF L+ T
Sbjct: 679 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 738
Query: 602 PGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
PG+ IRI+KN+RVC DCH+ K ++ I +R I+VRD NRFHHF DG CSCGDYW
Sbjct: 739 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 231/537 (43%), Gaps = 61/537 (11%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++P+ + Y + + R GR++H ++ D +L++ ++++ MY + +E
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD--SELLLGSNIVKMYFKFWRVED 172
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFD MP KDT+ W +MI+GY +NE V+++ +F D++ S +R + TL ++
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI-NESCTRLDTTTLLDILPAV 231
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G Q+H K G + +V + + +Y++CG + A+F E R + V++
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF-RKPDIVAY 290
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
NA+I LF ++ G S L+ G L +HG+
Sbjct: 291 NAMI--HGYTSNGETELSLSLFKELMLSG---ARLRSSTLVSLVPVSGHLMLIYAIHGYC 345
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
LKS V L +Y+K I ARK+FD + + S N+M+ GY Q+G ++A+
Sbjct: 346 LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAI 405
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
LF++M + PN +T +L+AC+ G L G+ L+R E + ++ +
Sbjct: 406 SLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMY 465
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHV 490
+ G + A + ++ + W ++ +H
Sbjct: 466 AKCGSIAEARRLFD-LMTKKNEVTWNTMISGYGLH------------------------- 499
Query: 491 LLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIK 550
G+ +EA NI M +SG+ P + H + + D+I
Sbjct: 500 ---------GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK-----EGDEI-- 543
Query: 551 MWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAF-ALLNTSPGSTI 606
N I G+ P +H VD + +LQ AL F ++ PGS++
Sbjct: 544 ----FNSMIHRYGFEPSVKHYACMVDILGRAGHLQR-----ALQFIEAMSIEPGSSV 591
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 139/327 (42%), Gaps = 14/327 (4%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y K T + L + H+ +L R+D+ + + + G + +AR +F
Sbjct: 23 YLDFFKRSTSISHLAQ---THAQIILHG--FRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
+ D + ++ G++ NE +L +F LR + +PN T + +
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAH-LRKSTDLKPNSSTYAFAISAASGFRDDR 136
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
GR +HG G + +GS++V MY + + +A+ VFD + K+ + WN +I
Sbjct: 137 AGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWNTMI--S 193
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ---GKWLHGHMLKSG 314
+F + E T + LL +V L++ G +H K+G
Sbjct: 194 GYRKNEMYVESIQVFRDLINE--SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
YV + +Y+K G I +F K D+V+ N+M+ GY +G + ++ LFK
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLL 401
+++ G T +SL+ H L+
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLMLI 338
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/569 (41%), Positives = 341/569 (59%), Gaps = 10/569 (1%)
Query: 89 GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G R G++ + L V+D NS++ Y + G ++ A ++F +MP K+ ++WT+
Sbjct: 137 GCFRSGKVDQAERLFYQMPVKDT-AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK 208
MI G QNER+ +AL LF +MLR S FT ++ C P++ G QVHG K
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT--CVITACANAPAFHMGIQVHGLIIK 253
Query: 209 HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXX 268
GF +V +SL+ YA C +G+++ VFDE + V W AL+
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAV-WTALLSGYSLNKKHEDALS 312
Query: 269 XXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHM 328
+F+ M R + T+++ L S S++G+L+ GK +HG +K G + +VGN+L+ M
Sbjct: 313 --IFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 329 YAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
Y+ SG+++DA VF ++ K +VS NS+++G AQHG GK A V+F QM+R EP++ITF
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 389 LSLLTACSHAGLLDEGERYFQLMRQ--FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
LL+ACSH G L++G + F M ++ K+ HY +VD+LGR G L A IE M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 447 LIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAA 506
+++P +W ALL A MH ++ G AA +F LD S A+VLL+NIYASAGRW +
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Query: 507 NIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVP 566
+R MK +G+ K+P SWV I H F S D P +I + E L +++KE+GY P
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAP 608
Query: 567 DTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVT 626
D R L V+ +KE L YHSE+LA+AF L+NT GS + +MKN+RVC DCH+ +K ++
Sbjct: 609 DYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLIS 668
Query: 627 LIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+V REI++RD RFHHF +G CSCGDYW
Sbjct: 669 GVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/658 (37%), Positives = 362/658 (55%), Gaps = 54/658 (8%)
Query: 46 IIDDRNLLRRSKTGLHVLD-LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQ 104
II+ L + K L + + + PD +L C LG G+ +H +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV-- 256
Query: 105 NPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALV 164
++ ++ + N ++ MYA+CG ++ A VF M KD V+W +M+ GY+Q R DA+
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 165 LFPDML--------------------RG-------------GSGSRPNEFTLSSLVKCCG 191
LF M RG SG +PNE TL S++ C
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 192 LIPSYGDGRQVHGCCW---------KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+ + G+++H C+ K+G D V + L+DMYA+C + A+A+FD L
Sbjct: 377 SVGALMHGKEIH--CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 243 -RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV--TEFTYSALLCSASSVGS 299
+ ++ V+W +I L ++M E FT S L + +S+ +
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALE--LLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 300 LEQGKWLHGHMLKSGRKLVG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
L GK +H + L++ + V +V N L+ MYAK GSISDAR VFD ++ + V+ S++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVE 417
GY HG+G+EA+ +F +M R G + + +T L +L ACSH+G++D+G YF M+ FGV
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK 477
P HYA +VDLLGRAG L+ A+ IE M +EP +W A L +H K+E+G YAA+K
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 478 VFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS 537
+ EL + G++ LL+N+YA+AGRWK+ IR +M+ G+KK P CSWVE F
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 538 NDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFAL 597
D HP +I ++ Q IK+IGYVP+T L VD EK+ L HSEKLALA+ +
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792
Query: 598 LNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
L T G+ IRI KN+RVCGDCH+A Y++ I+ +II+RD++RFHHF +G CSC YW
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 205/455 (45%), Gaps = 58/455 (12%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L++ L+ + PD + + K C ++ +R G H+ L+ ++ + N+++
Sbjct: 112 LYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG--FISNVFVGNALV 169
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
MY+RC L AR+VFDEM D V+W S+I YA+ + AL +F M G RP+
Sbjct: 170 AMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM-TNEFGCRPD 228
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
TL +++ C + ++ G+Q+H N+FVG+ LVDMYA+CG + EA VF
Sbjct: 229 NITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFS 288
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE--------------GYGVTEF 285
+ K+ VSWNA++ LF KMQ E GY
Sbjct: 289 NMSV-KDVVSWNAMV--AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 286 TYSAL---------------------LCSASSVGSLEQGKWLHGHML-------KSGRKL 317
Y AL L +SVG+L GK +H + + K+G
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLV--KVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
V N L+ MYAK + AR +FD L + DVV+ M+ GY+QHG +A+ L +
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 376 MLRDGIE--PNDITFLSLLTACSHAGLLDEGER---YFQLMRQFGVEPKVSHYAKIVDLL 430
M + + PN T L AC+ L G++ Y +Q V VS+ ++D+
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC--LIDMY 523
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G + A + M+ + W +L+ MH
Sbjct: 524 AKCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMH 557
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 200/474 (42%), Gaps = 62/474 (13%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVT--WTSMITGYAQNERAVDALVLFPDM 169
L + + ++ Y G L HA + P D W S+I Y N A L LF
Sbjct: 59 LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFG-- 116
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
L P+ +T + K CG I S G H GF NVFVG++LV MY+RC
Sbjct: 117 LMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCR 176
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE-GYGVTEFTYS 288
L +A+ VFDE+ W + VSWN++I +F++M E G T
Sbjct: 177 SLSDARKVFDEMSVW-DVVSWNSIIESYAKLGKPKVALE--MFSRMTNEFGCRPDNITLV 233
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+L +S+G+ GK LH + S +VGN L+ MYAK G + +A VF +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 349 DVVSCNSMLI-----------------------------------GYAQHGFGKEAVVLF 373
DVVS N+M+ GYAQ G G EA+ +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGE-------RYFQLMRQFGVEPKVSHYAKI 426
+QML GI+PN++T +S+L+ C+ G L G+ +Y +R+ G + ++
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 427 VDLLGRAGLLDRAMSFIEGMLI-EPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD-PF 484
+D+ + +D A + + + E W ++G H ++FE D
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
A + + A A A I K + L+ + +N+V +FVSN
Sbjct: 474 RPNAFTISCALVACASL--AALRIGKQIHAYALRNQ--------QNAVPLFVSN 517
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 346/587 (58%), Gaps = 9/587 (1%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V PD + LLK C+ L L+ GR VH+ D D+ +QN ++ +YA+C L
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDA--DVFVQNGLIALYAKCRRLGS 172
Query: 131 ARQVFD--EMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
AR VF+ +P + V+WT++++ YAQN ++AL +F M + +P+ L S++
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK--MDVKPDWVALVSVLN 230
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ GR +H K G + SL MYA+CG + A+ +FD++ + N +
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM-KSPNLI 289
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
WNA+I +F +M + + ++ + + + VGSLEQ + ++
Sbjct: 290 LWNAMISGYAKNGYAREAID--MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
++ +S + ++ + L+ M+AK GS+ AR VFDR + DVV ++M++GY HG +E
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
A+ L++ M R G+ PND+TFL LL AC+H+G++ EG +F M + P+ HYA ++D
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVID 467
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGA 488
LLGRAG LD+A I+ M ++P +WGALL A H+ +E+G YAAQ++F +DP +G
Sbjct: 468 LLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGH 527
Query: 489 HVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKI 548
+V L+N+YA+A W A +R MK+ GL K+ CSWVE+ + F D +HP+ ++I
Sbjct: 528 YVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Query: 549 IKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRI 608
+ E + +KE G+V + L ++ E E L HSE++A+A+ L++T G+ +RI
Sbjct: 588 ERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRI 647
Query: 609 MKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
KN+R C +CH+A K ++ +V REI+VRDTNRFHHF DG CSCGDYW
Sbjct: 648 TKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 201/393 (51%), Gaps = 11/393 (2%)
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
+ Y L+ + T +L++ +H+ L+ L+ + ++ + GD+ ARQVF
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITK--LIHASSSFGDITFARQVF 76
Query: 136 DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS 195
D++P W ++I GY++N DAL+++ +M P+ FT L+K C +
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS--PDSFTFPHLLKACSGLSH 134
Query: 196 YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG-RWKNEVSWNALI 254
GR VH ++ GF +VFV + L+ +YA+C LG A+ VF+ L + VSW A++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
+F++M++ ++L + + + L+QG+ +H ++K G
Sbjct: 195 --SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
++ + +L MYAK G ++ A+ +FD++ +++ N+M+ GYA++G+ +EA+ +F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
+M+ + P+ I+ S ++AC+ G L++ ++ + + V + ++D+ + G
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 435 LLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
++ A + L + +W A++ +H +
Sbjct: 373 SVEGARLVFDRTL-DRDVVVWSAMIVGYGLHGR 404
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 44/381 (11%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L + + + V+PD +L T L L++GR +H+ + ++ DL+I S+
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SL 263
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
MYA+CG + A+ +FD+M + + + W +MI+GYA+N A +A+ +F +M+ RP
Sbjct: 264 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI--NKDVRP 321
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
+ +++S + C + S R ++ + + D+VF+ S+L+DM+A+CG + A+ VF
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
D ++ V W+A+I L+ M+R G + T+ LL + + G
Sbjct: 382 DRTLD-RDVVVWSAMI--VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSG 438
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
+ +G W M + K+ N YA C L+
Sbjct: 439 MVREGWWFFNRM--ADHKI-----NPQQQHYA----------------------CVIDLL 469
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP 418
G A H +A + K M ++P + +LL+AC ++ GE Q + F ++P
Sbjct: 470 GRAGH--LDQAYEVIKCM---PVQPGVTVWGALLSACKKHRHVELGEYAAQQL--FSIDP 522
Query: 419 -KVSHYAKIVDLLGRAGLLDR 438
HY ++ +L A L DR
Sbjct: 523 SNTGHYVQLSNLYAAARLWDR 543
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 9/239 (3%)
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
Y++L+ SA+ L+Q +H +L G + G++ L+H + G I+ AR+VFD L
Sbjct: 24 YASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+ + N+++ GY+++ ++A++++ M + P+ TF LL ACS L G
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM-LIEPTAAIWGALLGASWMH 465
+ + G + V ++ L + L A + EG+ L E T W A++ A +
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA-YAQ 199
Query: 466 KKIEMGA---YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEP 521
M A ++ + ++ P + A V + N + K+ +I + GL+ EP
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWV-ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/655 (36%), Positives = 379/655 (57%), Gaps = 29/655 (4%)
Query: 5 MYPITTRVKLVQRHSVTLRRLWQTAISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLD 64
M + +++KL R VTLR + + +D + E + Y R+L R + +D
Sbjct: 1 MKSVMSKIKLF-RPVVTLRCSYSS--TDQTLLLSEFTRLCY---QRDLPR----AMKAMD 50
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
+ + D A Y L+K C + EG L+ H R + + N ++ MY +
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGH--RPMMFLVNVLINMYVK 108
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
L A Q+FD+MP ++ ++WT+MI+ Y++ + AL L MLR RPN +T S
Sbjct: 109 FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR--DNVRPNVYTYS 166
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
S+++ C D R +H K G +VFV S+L+D++A+ G +A +VFDE+
Sbjct: 167 SVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT- 222
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+ + WN++I LF +M+R G+ + T +++L + + + LE G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALE--LFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
H H++K + L+ + N L+ MY K GS+ DA +VF+++ + DV++ ++M+ G AQ+G
Sbjct: 281 QAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHY 423
+ +EA+ LF++M G +PN IT + +L ACSHAGLL++G YF+ M++ +G++P HY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
++DLLG+AG LD A+ + M EP A W LLGA + + + + YAA+KV LDP
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 484 FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHP 543
+G + LL+NIYA++ +W IR M+D G+KKEP CSW+E+ +H F+ D +HP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 544 QKDKIIKMWEKLNQEIKE---IGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNT 600
Q I+++ +KLNQ I IGYVP+T VL ++ + E +L++HSEKLALAF L+
Sbjct: 519 Q---IVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTL 575
Query: 601 SPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
IRI KN+R+CGDCH K + + R I++RD R+HHF DG CSCGDYW
Sbjct: 576 PIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/626 (35%), Positives = 356/626 (56%), Gaps = 39/626 (6%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
LD++ P++ + L+K ++ L G+ +H + V D+ + NS++ Y
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG--MAVKSAVGSDVFVANSLIHCY 176
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
CGDL+ A +VF + KD V+W SMI G+ Q AL LF M + + T
Sbjct: 177 FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM--ESEDVKASHVT 234
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+ ++ C I + GRQV ++ N+ + ++++DMY +CG + +A+ +FD +
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 243 R-----W-------------------------KNEVSWNALIXXXXXXXXXXXXXXXXLF 272
W K+ V+WNALI +F
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALI--VF 352
Query: 273 AKMQ-REGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAK 331
++Q ++ + + T + L + + VG+LE G+W+H ++ K G ++ +V + L+HMY+K
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 332 SGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
G + +R+VF+ + K DV ++M+ G A HG G EAV +F +M ++PN +TF ++
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 392 LTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
ACSH GL+DE E F Q+ +G+ P+ HYA IVD+LGR+G L++A+ FIE M I P
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP 532
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRK 510
+ ++WGALLGA +H + + A ++ EL+P GAHVLL+NIYA G+W+ + +RK
Sbjct: 533 STSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRK 592
Query: 511 MMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRH 570
M+ +GLKKEP CS +EI+ +H F+S D AHP +K+ ++ +++K GY P+
Sbjct: 593 HMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQ 652
Query: 571 VLLFVDQHE-KELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIV 629
VL +++ E KE +L HSEKLA+ + L++T IR++KN+RVCGDCHS K ++ +
Sbjct: 653 VLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLY 712
Query: 630 KREIIVRDTNRFHHFCDGFCSCGDYW 655
REIIVRD RFHHF +G CSC D+W
Sbjct: 713 DREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 199/427 (46%), Gaps = 46/427 (10%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC---GDLEH 130
+R+ + L++ C L +L++ H H +++ D S LF A LE+
Sbjct: 29 ERSRHISLIERCVSLRQLKQ---THGH-MIRTGTFSDPY--SASKLFAMAALSSFASLEY 82
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFDE+P ++ W ++I YA V ++ F DM+ S PN++T L+K
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV-SESQCYPNKYTFPFLIKAA 141
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ S G+ +HG K +VFV +SL+ Y CG L A VF + + K+ VSW
Sbjct: 142 AEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI-KEKDVVSW 200
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N++I LF KM+ E + T +L + + + +LE G+ + ++
Sbjct: 201 NSMINGFVQKGSPDKALE--LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA--------- 361
++ + + N +L MY K GSI DA+++FD + + D V+ +ML GYA
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 362 ----------------------QHGFGKEAVVLFKQM-LRDGIEPNDITFLSLLTACSHA 398
Q+G EA+++F ++ L+ ++ N IT +S L+AC+
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
G L+ G +++ G+ + ++ + + G L+++ + + +W A+
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS-VEKRDVFVWSAM 437
Query: 459 LGASWMH 465
+G MH
Sbjct: 438 IGGLAMH 444
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 15/298 (5%)
Query: 171 RGGSGSRPNEFTLS-------SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
R + S PN+ T + SL++ C S +Q HG + G + + S L
Sbjct: 14 RHPNFSNPNQPTTNNERSRHISLIERC---VSLRQLKQTHGHMIRTGTFSDPYSASKLFA 70
Query: 224 MYARCGF--LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
M A F L A+ VFDE+ + N +WN LI L + + Y
Sbjct: 71 MAALSSFASLEYARKVFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYP 129
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
++T+ L+ +A+ V SL G+ LHG +KS +V N+L+H Y G + A KV
Sbjct: 130 -NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F + + DVVS NSM+ G+ Q G +A+ LFK+M + ++ + +T + +L+AC+ L
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 402 DEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ G + + + V ++ ++D+ + G ++ A + M E W +L
Sbjct: 249 EFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTML 305
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 363/618 (58%), Gaps = 38/618 (6%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
A +P + Y L++ C++ L EG+ VH H ++ +VI N +L MYA+CG L
Sbjct: 80 AKKPPASTYCNLIQVCSQTRALEEGKKVHEH--IRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 130 HARQVFDEMPN-------------------------------KDTVTWTSMITGYAQNER 158
AR+VFDEMPN KD+ +WT+M+TGY + ++
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 159 AVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG 218
+ALVL+ M R SRPN FT+S V + G+++HG + G + +
Sbjct: 198 PEEALVLYSLMQRV-PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLW 256
Query: 219 SSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
SSL+DMY +CG + EA+ +FD++ K+ VSW ++I LF+++
Sbjct: 257 SSLMDMYGKCGCIDEARNIFDKIVE-KDVVSWTSMIDRYFKSSRWREGFS--LFSELVGS 313
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
E+T++ +L + + + + E GK +HG+M + G + ++L+ MY K G+I A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 339 RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
+ V D K D+VS S++ G AQ+G EA+ F +L+ G +P+ +TF+++L+AC+HA
Sbjct: 374 KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 399 GLLDEG-ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGA 457
GL+++G E ++ + + + HY +VDLL R+G ++ S I M ++P+ +W +
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 458 LLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGL 517
+LG + I++ AAQ++F+++P +V +ANIYA+AG+W+E +RK M++ G+
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 518 KKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQ 577
K P SW EI+ HVF++ D +HP ++I++ +L +++KE GYVP T VL V+
Sbjct: 554 TKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVED 613
Query: 578 HEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRD 637
+KE NL YHSEKLA+AFA+L+T G+ I++ KN+R C DCH A+K+++ I KR+I VRD
Sbjct: 614 EQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRD 673
Query: 638 TNRFHHFCDGFCSCGDYW 655
+ RFH F +G CSCGDYW
Sbjct: 674 STRFHCFENGQCSCGDYW 691
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 34/320 (10%)
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
G +P T +L++ C + +G++VH GF + + + L+ MYA+CG L
Sbjct: 78 GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 233 EAQAVFDE-----LGRW-------------------------KNEVSWNALIXXXXXXXX 262
+A+ VFDE L W K+ SW A++
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV--TGYVKK 195
Query: 263 XXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV 321
L++ MQR FT S + +A++V + +GK +HGH++++G +
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVL 255
Query: 322 GNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
++L+ MY K G I +AR +FD++V+ DVVS SM+ Y + +E LF +++
Sbjct: 256 WSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE 315
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
PN+ TF +L AC+ + G++ M + G +P + +VD+ + G ++ A
Sbjct: 316 RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKH 375
Query: 442 FIEGMLIEPTAAIWGALLGA 461
++G +P W +L+G
Sbjct: 376 VVDG-CPKPDLVSWTSLIGG 394
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/598 (39%), Positives = 346/598 (57%), Gaps = 9/598 (1%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L +L + P+ + LK LG + VH +L+ V D V +L
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQ-ILKTCYVLDPRV-GVGLL 289
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
+Y + GD+ A +VF+EMP D V W+ MI + QN +A+ LF M + PN
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE--AFVVPN 347
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
EFTLSS++ C + G G Q+HG K GF +++V ++L+D+YA+C + A +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
EL KNEVSWN +I +F + R VTE T+S+ L + +S+ S
Sbjct: 408 ELSS-KNEVSWNTVIVGYENLGEGGKAFS--MFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
++ G +HG +K+ V N+L+ MYAK G I A+ VF+ + +DV S N+++ G
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ-LMRQFGVEP 418
Y+ HG G++A+ + M +PN +TFL +L+ CS+AGL+D+G+ F+ ++R G+EP
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV 478
+ HY +V LLGR+G LD+AM IEG+ EP+ IW A+L AS E +A+++
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 479 FELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
+++P +VL++N+YA A +W A+IRK MK+ G+KKEP SW+E + VH F
Sbjct: 645 LKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG 704
Query: 539 DIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALL 598
HP I M E LN + GYVPD VLL +D EK+ L HSE+LALA+ L+
Sbjct: 705 LSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLV 764
Query: 599 N-TSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
S + I IMKN+R+C DCHSAMK ++ IV+R++++RD NRFHHF G CSCGD+W
Sbjct: 765 RMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 180/382 (47%), Gaps = 13/382 (3%)
Query: 63 LDLIDRGAVEP--DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLF 120
LDL ++ P D Y +L+ C + + +H L + + DL N +L
Sbjct: 35 LDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCL--DLFATNILLN 92
Query: 121 MYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
Y + G + A +FDEMP ++ V++ ++ GYA D + L+ + R G P+
Sbjct: 93 AYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHV 148
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
FT S +K + +H K G+ N FVG++L++ Y+ CG + A+ VF+
Sbjct: 149 FT--SFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG 206
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
+ K+ V W ++ L + M+ G+ +T+ L ++ +G+
Sbjct: 207 I-LCKDIVVWAGIV--SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF 263
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
+ K +HG +LK+ L VG LL +Y + G +SDA KVF+ + K DVV + M+ +
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARF 323
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
Q+GF EAV LF +M + PN+ T S+L C+ GE+ L+ + G + +
Sbjct: 324 CQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDI 383
Query: 421 SHYAKIVDLLGRAGLLDRAMSF 442
++D+ + +D A+
Sbjct: 384 YVSNALIDVYAKCEKMDTAVKL 405
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 201/434 (46%), Gaps = 16/434 (3%)
Query: 35 DNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREG 94
D +PE + ++ + + GL+ + R E + ++ LK L K
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLY--SRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 95 RLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYA 154
+HS + D + + +++ Y+ CG ++ AR VF+ + KD V W +++ Y
Sbjct: 166 PWLHSPIVKLGYD--SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 155 QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDN 214
+N D+L L M +G PN +T + +K + ++ + VHG K + +
Sbjct: 224 ENGYFEDSLKLLSCMRM--AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
VG L+ +Y + G + +A VF+E+ + + V W+ +I LF +
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPK-NDVVPWSFMI--ARFCQNGFCNEAVDLFIR 338
Query: 275 MQREGYGV-TEFTYSALL--CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAK 331
M RE + V EFT S++L C+ L G+ LHG ++K G L YV N L+ +YAK
Sbjct: 339 M-REAFVVPNEFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAK 395
Query: 332 SGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
+ A K+F L + VS N++++GY G G +A +F++ LR+ + ++TF S
Sbjct: 396 CEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSA 455
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT 451
L AC+ +D G + L + KV+ ++D+ + G + A S M
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 452 AAIWGALLGASWMH 465
A+ W AL+ H
Sbjct: 516 AS-WNALISGYSTH 528
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/634 (36%), Positives = 378/634 (59%), Gaps = 32/634 (5%)
Query: 34 NDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLK------TCTK 87
N + E K + ++ +RN++ S T L V + G V+ +L+ ++ + T
Sbjct: 92 NGEIDEARKVFDLMPERNVV--SWTAL-VKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 88 LGKLREGRLVHSHFLLQN-PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTW 146
+G L++GR+ + L + PD D + + S++ + G ++ AR++FDEM + +TW
Sbjct: 149 IGFLQDGRIDDACKLYEMIPD--KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITW 206
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS--YGDGRQVHG 204
T+M+TGY QN R DA +F M P + +S G + + D ++
Sbjct: 207 TTMVTGYGQNNRVDDARKIFDVM--------PEKTEVSWTSMLMGYVQNGRIEDAEEL-- 256
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXX 264
++ V ++++ + G + +A+ VFD + + +N+ SW +I
Sbjct: 257 --FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM-KERNDASWQTVIKIHERNGFEL 313
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
LF MQ++G T T ++L +S+ SL GK +H +++ + YV +
Sbjct: 314 EALD--LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 325 LLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM-LRDGIEP 383
L+ MY K G + ++ +FDR D++ NS++ GYA HG G+EA+ +F +M L +P
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
N++TF++ L+ACS+AG+++EG + ++ M FGV+P +HYA +VD+LGRAG + AM
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEM 491
Query: 443 IEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRW 502
I+ M +EP AA+WG+LLGA H ++++ + A+K+ E++P SG ++LL+N+YAS GRW
Sbjct: 492 IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRW 551
Query: 503 KEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDI-AHPQKDKIIKMWEKLNQEIKE 561
+ A +RK+MK ++K P CSW E+EN VH F I +HP+++ I+K+ ++L+ ++E
Sbjct: 552 ADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLRE 611
Query: 562 IGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSA 621
GY PD + L VD+ EK +L+YHSE+LA+A+ALL S G IR+MKN+RVC DCH+A
Sbjct: 612 AGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTA 671
Query: 622 MKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+K ++ + +REII+RD NRFHHF +G CSC DYW
Sbjct: 672 IKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 341/576 (59%), Gaps = 50/576 (8%)
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNE--RAVDALVLFPDMLRGGSGSRPNEFTLS 184
DL++A ++F++MP ++ +W ++I G+++++ +A+ A+ LF +M+ PN FT
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMM-SDEFVEPNRFTFP 132
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF------ 238
S++K C +G+Q+HG K+GF + FV S+LV MY CGF+ +A+ +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 239 -------DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE----------GYG 281
D R V WN +I LF KM++ GY
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARM--LFDKMRQRSVVSWNTMISGYS 250
Query: 282 VTEF---------------------TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
+ F T ++L + S +GSLE G+WLH + SG ++
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
+G+ L+ MY+K G I A VF+RL + +V++ ++M+ G+A HG +A+ F +M + G
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ P+D+ +++LLTACSH GL++EG RYF Q++ G+EP++ HY +VDLLGR+GLLD A
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASA 499
FI M I+P IW ALLGA M +EMG A + ++ P SGA+V L+N+YAS
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 500 GRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEI 559
G W E + +R MK+ ++K+P CS ++I+ +H FV D +HP+ +I M +++ ++
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKL 550
Query: 560 KEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCH 619
+ GY P T VLL +++ +KE L YHSEK+A AF L++TSPG IRI+KN+R+C DCH
Sbjct: 551 RLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCH 610
Query: 620 SAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
S++K ++ + KR+I VRD RFHHF DG CSC DYW
Sbjct: 611 SSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K + V + +G + P+ +L ++LG L G +H ++ +R D V+ +
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH--LYAEDSGIRIDDVLGS 313
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ MY++CG +E A VF+ +P ++ +TW++MI G+A + +A DA+ F M + +G
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ--AGV 371
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHG-CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
RP++ +L+ C +GR+ G + +VD+ R G L EA+
Sbjct: 372 RPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAE 431
Query: 236 AVFDELGRWKNEVSWNALI 254
+ ++V W AL+
Sbjct: 432 EFILNMPIKPDDVIWKALL 450
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSG----SISDARKVFDRLVKVDVVSCNSMLIGYA 361
+H +KSG+ +L A S + A K+F+++ + + S N+++ G++
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 362 QHGFGKE--AVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
+ K A+ LF +M+ D +EPN TF S+L AC+ G + EG++ L ++G
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/589 (39%), Positives = 353/589 (59%), Gaps = 29/589 (4%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSH-----FLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
+ ++K C L +LR +H FL D I+ +++ Y++C + A
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLF-------DQNIRTALMVAYSKCTAMLDAL 350
Query: 133 QVFDEMP-NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
++F E+ + V+WT+MI+G+ QN+ +A+ LF +M R G RPNEFT S ++
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR--KGVRPNEFTYSVILTALP 408
Query: 192 LI-PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+I PS +VH K + + VG++L+D Y + G + EA VF + K+ V+W
Sbjct: 409 VISPS-----EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD-KDIVAW 462
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL--CSASSVGSLEQGKWLHG 308
+A++ +F ++ + G EFT+S++L C+A++ S+ QGK HG
Sbjct: 463 SAMLAGYAQTGETEAAIK--MFGELTKGGIKPNEFTFSSILNVCAATN-ASMGQGKQFHG 519
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+KS V + LL MYAK G+I A +VF R + D+VS NSM+ GYAQHG +
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIV 427
A+ +FK+M + ++ + +TF+ + AC+HAGL++EGE+YF +M R + P H + +V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
DL RAG L++AM IE M + IW +L A +HKK E+G AA+K+ + P S
Sbjct: 640 DLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSA 699
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
A+VLL+N+YA +G W+E A +RK+M + +KKEP SW+E++N + F++ D +HP KD+
Sbjct: 700 AYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQ 759
Query: 548 IIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIR 607
I E L+ +K++GY PDT +VL +D KE L HSE+LA+AF L+ T GS +
Sbjct: 760 IYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLL 819
Query: 608 IMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHF-CDGFCSCGDYW 655
I+KN+RVCGDCH +K + I +REI+VRD+NRFHHF DG CSCGD+W
Sbjct: 820 IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 167/313 (53%), Gaps = 12/313 (3%)
Query: 88 LGKLRE----GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDT 143
LG L E GR + H ++ + + + NS++ +Y +CG++ AR +FD+ K
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 144 VTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVH 203
VTW SMI+GYA N ++AL +F M + R +E + +S++K C + Q+H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRL--NYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 204 GCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXX 263
K+GF + + ++L+ Y++C + +A +F E+G N VSW A+I
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMI--SGFLQND 376
Query: 264 XXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN 323
LF++M+R+G EFTYS +L + + E +H ++K+ + VG
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGT 432
Query: 324 TLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
LL Y K G + +A KVF + D+V+ ++ML GYAQ G + A+ +F ++ + GI+P
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 384 NDITFLSLLTACS 396
N+ TF S+L C+
Sbjct: 493 NEFTFSSILNVCA 505
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 209/430 (48%), Gaps = 15/430 (3%)
Query: 35 DNVPELDKSYYIIDDRNLLR--RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D P D+ YI R R++ + I R +E D +++ +LK L
Sbjct: 51 DKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDEL 110
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
GR +H + DD+ + S++ Y + + + R+VFDEM ++ VTWT++I+G
Sbjct: 111 FGRQLHCQCI--KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC 212
YA+N + L LF M G++PN FT ++ + G G QVH K+G
Sbjct: 169 YARNSMNDEVLTLF--MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
+ V +SL+++Y +CG + +A+ +FD+ K+ V+WN++I +F
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKT-EVKSVVTWNSMI--SGYAANGLDLEALGMF 283
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
M+ ++E ++++++ +++ L + LH ++K G + L+ Y+K
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 333 GSISDARKVFDRLVKV-DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
++ DA ++F + V +VVS +M+ G+ Q+ +EAV LF +M R G+ PN+ T+ +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT 451
LTA ++ E + Q+++ E + ++D + G ++ A G+ +
Sbjct: 404 LTALP---VISPSEVHAQVVKT-NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 452 AAIWGALLGA 461
A W A+L
Sbjct: 460 VA-WSAMLAG 468
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 145/270 (53%), Gaps = 5/270 (1%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
L +A +FD+ P +D ++ S++ G++++ R +A LF ++ R G + F SS++
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIF--SSVL 100
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
K + GRQ+H C K GF D+V VG+SLVD Y + + + VFDE+ + +N
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM-KERNV 159
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
V+W LI LF +MQ EG FT++A L + G +G +H
Sbjct: 160 VTWTTLISGYARNSMNDEVLT--LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
++K+G V N+L+++Y K G++ AR +FD+ VV+ NSM+ GYA +G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
EA+ +F M + + ++ +F S++ C++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCAN 307
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 349/603 (57%), Gaps = 9/603 (1%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
RRSK + + L+ V PD + K + L +E + H ++ +V ++
Sbjct: 144 RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV-SNVF 202
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ ++++ MY + G A+ V D + KD V T++I GY+Q +A+ F ML
Sbjct: 203 VGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLV-- 260
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
+PNE+T +S++ CG + G+G+ +HG K GF + +SL+ MY RC + +
Sbjct: 261 EKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDD 320
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+ VF + + N+VSW +LI F KM R+ FT S+ L
Sbjct: 321 SLRVFKCI-EYPNQVSWTSLISGLVQNGREEMALIE--FRKMMRDSIKPNSFTLSSALRG 377
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
S++ E+G+ +HG + K G Y G+ L+ +Y K G AR VFD L +VDV+S
Sbjct: 378 CSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISL 437
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
N+M+ YAQ+GFG+EA+ LF++M+ G++PND+T LS+L AC+++ L++EG F R+
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK 497
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
+ HYA +VDLLGRAG L+ A + +I P +W LL A +H+K+EM
Sbjct: 498 DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAER 556
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
+K+ E++P G +L++N+YAS G+W ++ MKD LKK PA SWVEI H
Sbjct: 557 ITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETH 616
Query: 534 VFVSNDI-AHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLA 592
F++ D+ +HP ++I++ E+L ++ K++GYV D V +++ KE +L HSEKLA
Sbjct: 617 TFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLA 676
Query: 593 LAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCG 652
+AFA+ GS IRI+KN+RVC DCHS +K V+ ++KREII RD+ RFHHF DG CSCG
Sbjct: 677 IAFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCG 735
Query: 653 DYW 655
DYW
Sbjct: 736 DYW 738
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 13/365 (3%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQN--PDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
+ +LL+ C + + + +H L ++ ++ S+ +CGD+++ARQVF
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASL-----KCGDIDYARQVF 122
Query: 136 DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS 195
D M + VTW S+I ++ R+ +A+ ++ M+ + P+E+TLSS+ K +
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI--TNNVLPDEYTLSSVFKAFSDLSL 180
Query: 196 YGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
+ ++ HG G NVFVGS+LVDMY + G EA+ V D + K+ V ALI
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEE-KDVVLITALI 239
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
F M E E+TY+++L S ++ + GK +HG M+KSG
Sbjct: 240 VGYSQKGEDTEAVKA--FQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
+ +LL MY + + D+ +VF + + VS S++ G Q+G + A++ F+
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
+M+RD I+PN T S L CS+ + +EG + ++ ++G + + ++DL G+ G
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 435 LLDRA 439
D A
Sbjct: 418 CSDMA 422
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 12/247 (4%)
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
T +S LL S+ K + HMLKSG G+ L+ K G I AR+V
Sbjct: 63 TTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFP-AEISGSKLVDASLKCGDIDYARQV 121
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
FD + + +V+ NS++ +H KEAV +++ M+ + + P++ T S+ A S L
Sbjct: 122 FDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLE 181
Query: 402 DEGERYFQLMRQFGVE-PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
E +R L G+E V + +VD+ + G A ++ + + I ++G
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 461 ASWMHKKIE-MGAYAAQKVFELDPF-YSGAHVLLANIYASAGRWKEAAN---IRKMMKDS 515
S + E + A+ + V ++ P Y+ A VL+ S G K+ N I +M S
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLI-----SCGNLKDIGNGKLIHGLMVKS 296
Query: 516 GLKKEPA 522
G + A
Sbjct: 297 GFESALA 303
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/600 (37%), Positives = 349/600 (58%), Gaps = 11/600 (1%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
+H+ + + +P + +LK L G+ +H+ L D + N +
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA--LSVTTGFSRDASVGNQI 291
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
L Y++ + R +FDEMP D V++ +I+ Y+Q ++ +L F +M G R
Sbjct: 292 LDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRR- 350
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVF-VGSSLVDMYARCGFLGEAQAV 237
F ++++ + S GRQ+H C D++ VG+SLVDMYA+C EA+ +
Sbjct: 351 -NFPFATMLSIAANLSSLQMGRQLH-CQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
F L + + VSW ALI LF KM+ + T++ +L +++S
Sbjct: 409 FKSLPQ-RTTVSWTALISGYVQKGLHGAGLK--LFTKMRGSNLRADQSTFATVLKASASF 465
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
SL GK LH +++SG + G+ L+ MYAK GSI DA +VF+ + + VS N+++
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGV 416
+A +G G+ A+ F +M+ G++P+ ++ L +LTACSH G +++G YFQ M +G+
Sbjct: 526 SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGI 585
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
PK HYA ++DLLGR G A ++ M EP +W ++L A +HK + AA+
Sbjct: 586 TPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAE 645
Query: 477 KVFELDPFY-SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVF 535
K+F ++ + A+V ++NIYA+AG W++ +++K M++ G+KK PA SWVE+ + +HVF
Sbjct: 646 KLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVF 705
Query: 536 VSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAF 595
SND HP D+I++ +L EI+ GY PDT V+ VD+ K +L+YHSE+LA+AF
Sbjct: 706 SSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAF 765
Query: 596 ALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
AL++T G I +MKN+R C DCH+A+K ++ IVKREI VRDT+RFHHF +G CSCGDYW
Sbjct: 766 ALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 185/389 (47%), Gaps = 6/389 (1%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + LL C VH+ + D L + N +L Y L+ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+F+E+P KD+VT+ ++ITGY ++ +++ LF M + SG +P++FT S ++K
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ--SGHQPSDFTFSGVLKAVVG 262
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ + G+Q+H GF + VG+ ++D Y++ + E + +FDE+ + VS+N
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL-DFVSYNV 321
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I F +MQ G+ F ++ +L A+++ SL+ G+ LH L
Sbjct: 322 VI--SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
+ + +VGN+L+ MYAK +A +F L + VS +++ GY Q G + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 373 FKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGR 432
F +M + + TF ++L A + L G++ + + G V + +VD+ +
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
G + A+ E M + A W AL+ A
Sbjct: 500 CGSIKDAVQVFEEM-PDRNAVSWNALISA 527
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 166/354 (46%), Gaps = 10/354 (2%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+ V N+++ + + GD+ AR +FD MP++ VTWT ++ YA+N +A LF M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 171 RGGSGSRPNEFTLSSLVKCCG-LIPSYGDGRQVHGCCWKHGFCDNVF--VGSSLVDMYAR 227
R S + P+ T ++L+ C +P G QVH K GF N F V + L+ Y
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 228 CGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
L A +F+E+ K+ V++N LI LF KM++ G+ ++FT+
Sbjct: 197 VRRLDLACVLFEEIPE-KDSVTFNTLI--TGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
S +L + + G+ LH + +G VGN +L Y+K + + R +FD + +
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPE 313
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
+D VS N ++ Y+Q + ++ F++M G + + F ++L+ ++ L G R
Sbjct: 314 LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG-RQ 372
Query: 408 FQLMRQFGVEPKVSHYAK-IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
+ H +VD+ + + + A I L + T W AL+
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEA-ELIFKSLPQRTTVSWTALIS 425
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/609 (37%), Positives = 349/609 (57%), Gaps = 71/609 (11%)
Query: 114 IQNSVLFMYARCGD----LEHARQVFDEMPNKDTVTWTSMITGYAQN------ERAVDA- 162
+ N+++ +Y++C L AR+VFDE+ KD +WT+M+TGY +N E ++
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 163 -----LVLFPDMLRG------------------GSGSRPNEFTLSSLVKCCGLIPSYGDG 199
LV + M+ G SG +EFT S+++ C G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 200 RQVHGCCWKHGFCDNVF-VGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL----- 253
+QVH + D F +SLV +Y +CG EA+A+F+++ K+ VSWNAL
Sbjct: 306 KQVHAYVLRRE--DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYV 362
Query: 254 ------------------------IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
I LF+ M+REG+ ++ +S
Sbjct: 363 SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
+ S + +G+ G+ H +LK G GN L+ MYAK G + +AR+VF + +D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
VS N+++ QHG G EAV ++++ML+ GI P+ IT L++LTACSHAGL+D+G +YF
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542
Query: 410 LMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
M + + P HYA+++DLL R+G A S IE + +PTA IW ALL +H +
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNM 602
Query: 469 EMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI 528
E+G AA K+F L P + G ++LL+N++A+ G+W+E A +RK+M+D G+KKE ACSW+E+
Sbjct: 603 ELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
Query: 529 ENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFV--DQHEKELNLQY 586
E VH F+ +D +HP+ + + + L +E++ +GYVPDT VL V D H++++ L
Sbjct: 663 ETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDM-LTT 721
Query: 587 HSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCD 646
HSEK+A+AF L+ PG+TIRI KN+R CGDCH+ ++++ +V+R+II+RD RFHHF +
Sbjct: 722 HSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRN 781
Query: 647 GFCSCGDYW 655
G CSCG++W
Sbjct: 782 GECSCGNFW 790
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 179/400 (44%), Gaps = 53/400 (13%)
Query: 62 VLDLIDR---GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ--N 116
L+++ R +E D Y +++ C G L+ G+ VH++ L R+D N
Sbjct: 270 ALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-----REDFSFHFDN 324
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGY----------------------- 153
S++ +Y +CG + AR +F++MP KD V+W ++++GY
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 154 --------AQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
A+N + L LF M R G P ++ S +K C ++ +Y +G+Q H
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKR--EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K GF ++ G++L+ MYA+CG + EA+ VF + + VSWNALI
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM-PCLDSVSWNALI--AALGQHGHG 499
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG---YVG 322
++ +M ++G T +L + S G ++QG+ M R G Y
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA- 558
Query: 323 NTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
L+ + +SG SDA V + L K ++L G HG E ++ L I
Sbjct: 559 -RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG-NMELGIIAADKLFGLI 616
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVS 421
+D T++ L + G +E R +LMR GV+ +V+
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVA 656
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 209/502 (41%), Gaps = 119/502 (23%)
Query: 73 PD--RALYQRL---LKTCTKLGK--LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
PD RA+ R L+ C L + L+ R VH + + R ++ N ++ +Y +
Sbjct: 5 PDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHIL--NRLIDVYCKS 62
Query: 126 GDLEHARQVFDEM--PNK-------------------------------DTVTWTSMITG 152
+L +ARQ+FDE+ P+K DTV + +MITG
Sbjct: 63 SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITG 122
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR---QVHGCCWKH 209
++ N A+ LF M G +P+ FT +S++ L+ D + Q H K
Sbjct: 123 FSHNNDGYSAINLFCKMKH--EGFKPDNFTFASVLAGLALVAD--DEKQCVQFHAAALKS 178
Query: 210 GFCDNVFVGSSLVDMYARCG----FLGEAQAVFDEL-------------GRWKNE----- 247
G V ++LV +Y++C L A+ VFDE+ G KN
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 248 -------------VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
V++NA+I + +M G + EFTY +++ +
Sbjct: 239 EELLEGMDDNMKLVAYNAMI--SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRAC 296
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCN 354
++ G L+ GK +H ++L+ + N+L+ +Y K G +AR +F+++ D+VS N
Sbjct: 297 ATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 355 SMLIGY-------------------------------AQHGFGKEAVVLFKQMLRDGIEP 383
++L GY A++GFG+E + LF M R+G EP
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
D F + +C+ G G++Y + + G + +S ++ + + G+++ A
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 444 EGMLIEPTAAIWGALLGASWMH 465
M + + W AL+ A H
Sbjct: 476 RTMPCLDSVS-WNALIAALGQH 496
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ GL + + R EP + +K+C LG G+ H+ L D L N
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD--SSLSAGN 456
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ MYA+CG +E ARQVF MP D+V+W ++I Q+ +A+ ++ +ML+ G
Sbjct: 457 ALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLK--KGI 514
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQ 235
RP+ TL +++ C GR+ + + L+D+ R G +A+
Sbjct: 515 RPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAE 574
Query: 236 AVFDELGRWKNEVSWNALI 254
+V + L W AL+
Sbjct: 575 SVIESLPFKPTAEIWEALL 593
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/543 (40%), Positives = 338/543 (62%), Gaps = 5/543 (0%)
Query: 113 VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
++ N+++ Y++ +R+ F++ P K + TW+S+I+ +AQNE +L M+ G
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
RP++ L S K C ++ GR VH K G+ +VFVGSSLVDMYA+CG +
Sbjct: 111 NL--RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIV 168
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
A+ +FDE+ + +N V+W+ ++ LF + E V ++++S+++
Sbjct: 169 YARKMFDEMPQ-RNVVTWSGMMYGYAQMGENEEALW--LFKEALFENLAVNDYSFSSVIS 225
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVS 352
++ LE G+ +HG +KS +VG++L+ +Y+K G A +VF+ + ++
Sbjct: 226 VCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGI 285
Query: 353 CNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR 412
N+ML YAQH ++ + LFK+M G++PN ITFL++L ACSHAGL+DEG YF M+
Sbjct: 286 WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK 345
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
+ +EP HYA +VD+LGRAG L A+ I M I+PT ++WGALL + +HK E+ A
Sbjct: 346 ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAA 405
Query: 473 YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
+AA KVFEL P SG H+ L+N YA+ GR+++AA RK+++D G KKE SWVE N V
Sbjct: 406 FAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKV 465
Query: 533 HVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLA 592
H F + + H + +I + +L +E+++ GY+ DT +VL VD EK ++YHSE+LA
Sbjct: 466 HTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLA 525
Query: 593 LAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCG 652
+AF L+ IR+MKN+RVCGDCH+A+K++++ +R IIVRD NRFH F DG CSC
Sbjct: 526 IAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCN 585
Query: 653 DYW 655
DYW
Sbjct: 586 DYW 588
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 7/287 (2%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L L + G + PD + K+C L + GR VH + D D+ + +S+
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA--DVFVGSSL 157
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ MYA+CG++ +AR++FDEMP ++ VTW+ M+ GYAQ +AL LF + L
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV-- 215
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
N+++ SS++ C GRQ+HG K F + FVGSSLV +Y++CG A VF
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
+E+ KN WNA++ LF +M+ G T+ +L + S G
Sbjct: 276 NEVP-VKNLGIWNAML--KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
+++G++ M +S + +L+ M ++G + +A +V +
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%)
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
LL S++ S +G LHG+++KSG L+ V N L++ Y+KS D+R+ F+ +
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
+ +S++ +AQ+ ++ K+M+ + P+D S +C+ D G
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
L + G + V + +VD+ + G + A + M G + G + M + E
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 470 MGAYAAQKVFE 480
+ +FE
Sbjct: 201 ALWLFKEALFE 211
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/546 (38%), Positives = 327/546 (59%), Gaps = 7/546 (1%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+ V+ NS++ CG +E A Q+F M KD+V+W +MI G AQN A +A+ F +M
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
G + +++ S++ CG + + +G+Q+H C + F D+++VGS+L+DMY +C
Sbjct: 263 V--QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
L A+ VFD + + KN VSW A++ +F MQR G +T
Sbjct: 321 LHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVK--IFLDMQRSGIDPDHYTLGQA 377
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
+ + ++V SLE+G HG + SG V N+L+ +Y K G I D+ ++F+ + D
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQL 410
VS +M+ YAQ G E + LF +M++ G++P+ +T +++ACS AGL+++G+RYF+L
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 411 M-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
M ++G+ P + HY+ ++DL R+G L+ AM FI GM P A W LL A +E
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Query: 470 MGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
+G +AA+ + ELDP + + LL++IYAS G+W A +R+ M++ +KKEP SW++ +
Sbjct: 558 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK 617
Query: 530 NSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSE 589
+H F ++D + P D+I E+LN +I + GY PDT V V++ K L YHSE
Sbjct: 618 GKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSE 677
Query: 590 KLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFC 649
+LA+AF L+ G IR+ KN+RVC DCH+A K+++ + REI+VRD RFH F DG C
Sbjct: 678 RLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTC 737
Query: 650 SCGDYW 655
SCGD+W
Sbjct: 738 SCGDFW 743
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 33/382 (8%)
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
+ +L N++L Y++ G + F+++P++D VTW +I GY+ + A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M+R S + TL +++K G+Q+HG K GF + VGS L+ MYA
Sbjct: 129 MMRDFSANL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 229 GFLGEAQAVFDEL-----------------------------GRWKNEVSWNALIXXXXX 259
G + +A+ VF L G K+ VSW A+I
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI--KGL 245
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
F +M+ +G + ++ + ++L + +G++ +GK +H ++++ +
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
YVG+ L+ MY K + A+ VFDR+ + +VVS +M++GY Q G +EAV +F M R
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
GI+P+ T ++AC++ L+EG ++ G+ V+ +V L G+ G +D +
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 440 MSFIEGMLIEPTAAIWGALLGA 461
M + A W A++ A
Sbjct: 426 TRLFNEMNVR-DAVSWTAMVSA 446
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 103/203 (50%), Gaps = 9/203 (4%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R++ + + + R ++PD + + C + L EG H + + + +
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG--LIHYVTV 408
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
NS++ +Y +CGD++ + ++F+EM +D V+WT+M++ YAQ RAV+ + LF M++
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ--H 466
Query: 175 GSRPNEFTLSSLVKCC---GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G +P+ TL+ ++ C GL+ R ++G ++ S ++D+++R G L
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEK--GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 232 GEAQAVFDELGRWKNEVSWNALI 254
EA + + + + W L+
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLL 547
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 39/313 (12%)
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
P F +++V L+ S R+V + N+F ++L+ Y++ G + E ++
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMEST 94
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE-GYGVTEFTYSALLCSASS 296
F++L ++ V+WN LI + M R+ +T T +L +SS
Sbjct: 95 FEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKA--YNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD------------- 343
G + GK +HG ++K G + VG+ LL+MYA G ISDA+KVF
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 344 -----------------RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
R ++ D VS +M+ G AQ+G KEA+ F++M G++ +
Sbjct: 212 MGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY 271
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
F S+L AC G ++EG++ + + + + + ++D+ + L A + + M
Sbjct: 272 PFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
Query: 447 LIEPTAAIWGALL 459
+ W A++
Sbjct: 332 K-QKNVVSWTAMV 343
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 345/590 (58%), Gaps = 14/590 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P + Y+ L+ C L + VH H L D D + ++ MY+ G +++AR
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSD--QDPFLATKLIGMYSDLGSVDYAR 132
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC-- 190
+VFD+ + W ++ + L L+ M R G S + FT + ++K C
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES--DRFTYTYVLKACVA 190
Query: 191 --GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ G+++H + G+ +V++ ++LVDMYAR G + A VF + +N V
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP-VRNVV 249
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT--EFTYSALLCSASSVGSLEQGKWL 306
SW+A+I F +M RE + T ++L + +S+ +LEQGK +
Sbjct: 250 SWSAMIACYAKNGKAFEALRT--FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLI 307
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
HG++L+ G + V + L+ MY + G + ++VFDR+ DVVS NS++ Y HG+G
Sbjct: 308 HGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYG 367
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAK 425
K+A+ +F++ML +G P +TF+S+L ACSH GL++EG+R F+ M R G++P++ HYA
Sbjct: 368 KKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYAC 427
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
+VDLLGRA LD A ++ M EP +WG+LLG+ +H +E+ A++++F L+P
Sbjct: 428 MVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKN 487
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQK 545
+G +VLLA+IYA A W E ++K+++ GL+K P W+E+ ++ FVS D +P
Sbjct: 488 AGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLM 547
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGST 605
++I KL +++KE GY+P T+ VL ++ EKE + HSEKLALAF L+NTS G
Sbjct: 548 EQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEP 607
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
IRI KN+R+C DCH K+++ +++EI+VRD NRFH F +G CSCGDYW
Sbjct: 608 IRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 10/296 (3%)
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
S P++ T L+ CCG S D +VH +G + F+ + L+ MY+ G + A+
Sbjct: 73 SSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYAR 132
Query: 236 AVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL--CS 293
VFD+ R + WNAL L+ KM R G FTY+ +L C
Sbjct: 133 KVFDKT-RKRTIYVWNALF--RALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 294 AS--SVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
AS +V L +GK +H H+ + G Y+ TL+ MYA+ G + A VF + +VV
Sbjct: 190 ASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVV 249
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE--PNDITFLSLLTACSHAGLLDEGERYFQ 409
S ++M+ YA++G EA+ F++M+R+ + PN +T +S+L AC+ L++G+
Sbjct: 250 SWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHG 309
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ + G++ + + +V + GR G L+ + M + W +L+ + +H
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVS-WNSLISSYGVH 364
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 321/532 (60%), Gaps = 7/532 (1%)
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
+ +AR +F+ M D V + SM GY++ ++ LF ++L G P+ +T S
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE--DGILPDNYTFPS 134
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
L+K C + + +GRQ+H K G DNV+V +L++MY C + A+ VFD +
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE-P 193
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
V +NA+I LF +MQ + E T ++L S + +GSL+ GKW
Sbjct: 194 CVVCYNAMITGYARRNRPNEALS--LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+H + K V L+ M+AK GS+ DA +F+++ D + ++M++ YA HG
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYA 424
++++++F++M + ++P++ITFL LL ACSH G ++EG +YF Q++ +FG+ P + HY
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDLL RAG L+ A FI+ + I PT +W LL A H +++ ++++FELD
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDS 431
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
+ G +V+L+N+YA +W+ ++RK+MKD K P CS +E+ N VH F S D
Sbjct: 432 HGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSA 491
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVL-LFVDQHEKELNLQYHSEKLALAFALLNTSPG 603
K+ + +++ +E+K GYVPDT V+ ++ EKE+ L+YHSEKLA+ F LLNT PG
Sbjct: 492 TTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPG 551
Query: 604 STIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+TIR++KN+RVC DCH+A K ++LI R++++RD RFHHF DG CSCGD+W
Sbjct: 552 TTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 148/275 (53%), Gaps = 10/275 (3%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + LLK C L EGR +H L + D++ + +++ MY C D++ AR
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHC--LSMKLGLDDNVYVCPTLINMYTECEDVDSAR 184
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
VFD + V + +MITGYA+ R +AL LF +M G +PNE TL S++ C L
Sbjct: 185 CVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCAL 242
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ S G+ +H KH FC V V ++L+DM+A+CG L +A ++F+++ R+K+ +W+A
Sbjct: 243 LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM-RYKDTQAWSA 301
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I +F +M+ E E T+ LL + S G +E+G+ M+
Sbjct: 302 MI--VAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMV- 358
Query: 313 SGRKLVGYVGN--TLLHMYAKSGSISDARKVFDRL 345
S +V + + +++ + +++G++ DA + D+L
Sbjct: 359 SKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS---GSISDARKVFDRLVKVDVV 351
S SL + + + +KS + V +V L++ +S S+S AR +F+ + + D+V
Sbjct: 37 SKCNSLRELMQIQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
NSM GY++ E LF ++L DGI P++ TF SLL AC+ A L+EG + L
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ G++ V ++++ +D A + ++EP + A++
Sbjct: 156 MKLGLDDNVYVCPTLINMYTECEDVDSARCVFD-RIVEPCVVCYNAMI 202
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/553 (38%), Positives = 341/553 (61%), Gaps = 17/553 (3%)
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPN-KDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
+ N+ + Y++ G L A VF M +D V+W SMI Y Q++ AL L+ +M+
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIF- 233
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF-- 230
G + + FTL+S++ + GRQ HG K GF N VGS L+D Y++CG
Sbjct: 234 -KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD 292
Query: 231 -LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
+ +++ VF E+ + V WN +I F +MQR G+ + ++
Sbjct: 293 GMYDSEKVFQEILS-PDLVVWNTMISGYSMNEELSEEAVKS-FRQMQRIGHRPDDCSFVC 350
Query: 290 LLCSASSVGSLEQGKWLHGHMLKS---GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
+ + S++ S Q K +HG +KS ++ V N L+ +Y KSG++ DAR VFDR+
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS--VNNALISLYYKSGNLQDARWVFDRMP 408
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+++ VS N M+ GYAQHG G EA++L+++ML GI PN ITF+++L+AC+H G +DEG+
Sbjct: 409 ELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Query: 407 YFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
YF M++ F +EP+ HY+ ++DLLGRAG L+ A FI+ M +P + W ALLGA H
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Query: 466 KKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
K + + AA ++ + P + +V+LAN+YA A +W+E A++RK M+ ++K+P CSW
Sbjct: 529 KNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSW 588
Query: 526 VEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLL---FVDQHEKEL 582
+E++ HVFV+ D +HP ++ + E++ +++K++GYV D + ++ + ++E+
Sbjct: 589 IEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEM 648
Query: 583 NLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFH 642
L +HSEKLA+AF L++T G + ++KN+R+CGDCH+A+K+++ + REIIVRD RFH
Sbjct: 649 RLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFH 708
Query: 643 HFCDGFCSCGDYW 655
F DG CSCGDYW
Sbjct: 709 CFKDGKCSCGDYW 721
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 181/356 (50%), Gaps = 22/356 (6%)
Query: 47 IDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNP 106
+ +R+L TG + L + V L + +K G+L R + + + P
Sbjct: 19 VAERDLF----TGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARA--AFYSTEEP 72
Query: 107 DVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLF 166
+V N ++ YA+ + ARQ+FDE+P DTV++ ++I+GYA A+VLF
Sbjct: 73 NV----FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLF 128
Query: 167 PDMLRGGSGSRPNEFTLSSLV-KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
M + G + FTLS L+ CC + +Q+H GF V ++ V Y
Sbjct: 129 KRMRK--LGFEVDGFTLSGLIAACCDRVDLI---KQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
++ G L EA +VF + ++EVSWN++I L+ +M +G+ + F
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMI--VAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSG---SISDARKVF 342
T +++L + +S+ L G+ HG ++K+G +VG+ L+ Y+K G + D+ KVF
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 343 DRLVKVDVVSCNSMLIGYAQH-GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
++ D+V N+M+ GY+ + +EAV F+QM R G P+D +F+ + +ACS+
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
N ++ YAK I AR++FD + + D VS N+++ GYA A+VLFK+M + G E
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
+ T L+ AC L + F + F V++ V + GLL A+S
Sbjct: 138 VDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNN--AFVTYYSKGGLLREAVSV 195
Query: 443 IEGMLIEPTAAIWGALLGASWMHKK 467
GM W +++ A HK+
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKE 220
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 349/614 (56%), Gaps = 42/614 (6%)
Query: 77 LYQRL--LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD--LEHAR 132
LY+ + L+ C+K +L++ +H+ +L+ ++D I + F + L +A+
Sbjct: 14 LYETMSCLQRCSKQEELKQ---IHAR-MLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
VFD DT W MI G++ ++ +L+L+ ML S + N +T SL+K C
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRML--CSSAPHNAYTFPSLLKACSN 127
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ ++ + Q+H K G+ ++V+ +SL++ YA G A +FD + ++VSWN+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE-PDDVSWNS 186
Query: 253 LIXXXXXX-----------------------------XXXXXXXXXXLFAKMQREGYGVT 283
+I LF +MQ
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
+ + L + + +G+LEQGKW+H ++ K+ ++ +G L+ MYAK G + +A +VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
+ K V + +++ GYA HG G+EA+ F +M + GI+PN ITF ++LTACS+ GL++E
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 404 GERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS 462
G+ F M R + ++P + HY IVDLLGRAGLLD A FI+ M ++P A IWGALL A
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 463 WMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
+HK IE+G + + +DP++ G +V ANI+A +W +AA R++MK+ G+ K P
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Query: 523 CSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLL-FVDQHEKE 581
CS + +E + H F++ D +HP+ +KI W + ++++E GYVP+ +LL VD E+E
Sbjct: 487 CSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDERE 546
Query: 582 LNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRF 641
+ HSEKLA+ + L+ T PG+ IRIMKN+RVC DCH K ++ I KR+I++RD RF
Sbjct: 547 AIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRF 606
Query: 642 HHFCDGFCSCGDYW 655
HHF DG CSCGDYW
Sbjct: 607 HHFRDGKCSCGDYW 620
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 5/200 (2%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
+K L + + VEPD L C +LG L +G+ +HS+ L +R D V+
Sbjct: 228 NKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY--LNKTRIRMDSVLG 285
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
++ MYA+CG++E A +VF + K WT++I+GYA + +A+ F +M + G
Sbjct: 286 CVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK--MG 343
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQV-HGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
+PN T ++++ C +G+ + + + + +VD+ R G L EA
Sbjct: 344 IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA 403
Query: 235 QAVFDELGRWKNEVSWNALI 254
+ E+ N V W AL+
Sbjct: 404 KRFIQEMPLKPNAVIWGALL 423
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 51/285 (17%)
Query: 72 EPDRAL--YQR---------------LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
EP+R+L YQR LLK C+ L E +H+ + +D+
Sbjct: 95 EPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ--ITKLGYENDVYA 152
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
NS++ YA G+ + A +FD +P D V+W S+I GY + + AL LF M +
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 175 GS-----------------------------RPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
S P+ +L++ + C + + G+ +H
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K + +G L+DMYA+CG + EA VF + + K+ +W ALI
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK-KSVQAWTALISGYAYHGHGRE 331
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
F +MQ+ G T++A+L + S G +E+GK + M
Sbjct: 332 AISK--FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/580 (38%), Positives = 348/580 (60%), Gaps = 12/580 (2%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK 141
L +C L + G+ +H L D+ ++ + N+++ +YA G L R++F MP
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDL--NVSVSNALMTLYAETGYLNECRKIFSSMPEH 479
Query: 142 DTVTWTSMITGYAQNERAV-DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
D V+W S+I A++ER++ +A+V F + R +G + N T SS++ + G+
Sbjct: 480 DQVSWNSIIGALARSERSLPEAVVCFLNAQR--AGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
Q+HG K+ D ++L+ Y +CG + + +F + ++ V+WN++I
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
F M + G + F Y+ +L + +SV +LE+G +H +++ +
Sbjct: 598 ELLAKALDLVWF--MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
VG+ L+ MY+K G + A + F+ + + S NSM+ GYA+HG G+EA+ LF+ M DG
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 381 IEPND-ITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDR 438
P D +TF+ +L+ACSHAGLL+EG ++F+ M +G+ P++ H++ + D+LGRAG LD+
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 439 AMSFIEGMLIEPTAAIWGALLGASWMH--KKIEMGAYAAQKVFELDPFYSGAHVLLANIY 496
FIE M ++P IW +LGA +K E+G AA+ +F+L+P + +VLL N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 497 ASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLN 556
A+ GRW++ RK MKD+ +KKE SWV +++ VH+FV+ D +HP D I K ++LN
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 557 QEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFAL-LNTSPGSTIRIMKNIRVC 615
+++++ GYVP T L ++Q KE L YHSEKLA+AF L S IRIMKN+RVC
Sbjct: 896 RKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVC 955
Query: 616 GDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
GDCHSA KY++ I R+II+RD+NRFHHF DG CSC D+W
Sbjct: 956 GDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 201/412 (48%), Gaps = 27/412 (6%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGK--LREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
D++ G + ++ + +L+ C ++G + GR +H L+ D V+ N ++ M
Sbjct: 92 DMVKEG-IFSNQYAFVSVLRACQEIGSVGILFGRQIHG--LMFKLSYAVDAVVSNVLISM 148
Query: 122 YARC-GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
Y +C G + +A F ++ K++V+W S+I+ Y+Q A +F M GSRP E
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY--DGSRPTE 206
Query: 181 FTLSSLVK-CCGLI-PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
+T SLV C L P Q+ K G ++FVGS LV +A+ G L A+ VF
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVF 266
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS----- 293
+++ +N V+ N L+ LF M V+ +Y LL S
Sbjct: 267 NQM-ETRNAVTLNGLMVGLVRQKWGEEATK--LFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 294 -ASSVGSLEQGKWLHGHMLKSGRKLVGY---VGNTLLHMYAKSGSISDARKVFDRLVKVD 349
A VG L++G+ +HGH++ +G LV + +GN L++MYAK GSI+DAR+VF + D
Sbjct: 323 LAEEVG-LKKGREVHGHVITTG--LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
VS NSM+ G Q+G EAV +K M R I P T +S L++C+ G++
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ G++ VS ++ L G L+ M E W +++GA
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM-PEHDQVSWNSIIGA 490
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 176/331 (53%), Gaps = 21/331 (6%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+++C +G R HS D D+ + N+++ Y GD AR+VFDEMP
Sbjct: 9 FVQSC--VGHRGAARFFHSRLYKNRLD--KDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD-- 198
++ V+W +++GY++N +ALV DM++ G S N++ S+++ C I S G
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS--NQYAFVSVLRACQEIGSVGILF 122
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARC-GFLGEAQAVFDELGRWKNEVSWNALIXXX 257
GRQ+HG +K + + V + L+ MY +C G +G A F ++ KN VSWN++I
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI-EVKNSVSWNSII--S 179
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS-----LEQGKWLHGHMLK 312
+F+ MQ +G TE+T+ +L+ +A S+ LEQ + + K
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQK 236
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
SG +VG+ L+ +AKSGS+S ARKVF+++ + V+ N +++G + +G+EA L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 373 FKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
F M I+ + +++ LL++ L +E
Sbjct: 297 FMDM-NSMIDVSPESYVILLSSFPEYSLAEE 326
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/548 (38%), Positives = 322/548 (58%), Gaps = 8/548 (1%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
D+ + S MY + + AR++FDE+P ++ TW + I+ + R +A+ F +
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
R PN T + + C G Q+HG + GF +V V + L+D Y +C
Sbjct: 202 R--IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
+ ++ +F E+G KN VSW +L+ L+ + +++ ++F S++
Sbjct: 260 IRSSEIIFTEMGT-KNAVSWCSLVAAYVQNHEDEKASV--LYLRSRKDIVETSDFMISSV 316
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
L + + + LE G+ +H H +K+ + +VG+ L+ MY K G I D+ + FD + + ++
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI--EPNDITFLSLLTACSHAGLLDEGERYF 408
V+ NS++ GYA G A+ LF++M G PN +TF+SLL+ACS AG ++ G + F
Sbjct: 377 VTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF 436
Query: 409 QLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
MR +G+EP HY+ IVD+LGRAG+++RA FI+ M I+PT ++WGAL A MH K
Sbjct: 437 DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGK 496
Query: 468 IEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
++G AA+ +F+LDP SG HVLL+N +A+AGRW EA +R+ +K G+KK SW+
Sbjct: 497 PQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWIT 556
Query: 528 IENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYH 587
++N VH F + D +H +I KL E++ GY PD + L +++ EK + +H
Sbjct: 557 VKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHH 616
Query: 588 SEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDG 647
SEKLALAF LL+ IRI KN+R+CGDCHS K+V+ VKREIIVRD NRFH F DG
Sbjct: 617 SEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDG 676
Query: 648 FCSCGDYW 655
CSC DYW
Sbjct: 677 ICSCKDYW 684
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 179/392 (45%), Gaps = 9/392 (2%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
LLK +R GR+VH+ +++ D + N ++ MY++ E AR V P
Sbjct: 12 LLKNAISASSMRLGRVVHAR-IVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
++ V+WTS+I+G AQN ALV F +M R G PN+FT K + G+
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRR--EGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
Q+H K G +VFVG S DMY + +A+ +FDE+ +N +WNA I
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE-RNLETWNAFISNSVTD 187
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
F + +R T+ A L + S L G LHG +L+SG
Sbjct: 188 GRPREAIEA--FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVS 245
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
V N L+ Y K I + +F + + VS S++ Y Q+ ++A VL+ + +D
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL-DRA 439
+E +D S+L+AC+ L+ G + VE + + +VD+ G+ G + D
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIEMG 471
+F E + E +L+G +++M
Sbjct: 366 QAFDE--MPEKNLVTRNSLIGGYAHQGQVDMA 395
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
VE + +L C + L GR +H+H + V + + ++++ MY +CG +E
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSIHAHAV--KACVERTIFVGSALVDMYGKCGCIED 363
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+ Q FDEMP K+ VT S+I GYA + AL LF +M G G PN T SL+ C
Sbjct: 364 SEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 423
Query: 191 GLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
+ +G ++ +G S +VDM R G + A ++
Sbjct: 424 SRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISV 483
Query: 250 WNAL 253
W AL
Sbjct: 484 WGAL 487
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/593 (38%), Positives = 338/593 (56%), Gaps = 50/593 (8%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V PD + +LK C+ G + GR +H + L + N ++ MY +CG L
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGS--ATKVGLSSTLFVGNGLVSMYGKCGFLSE 193
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR V DEM +D V+W S++ GYAQN+R DAL + +M + T++SL
Sbjct: 194 ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMASL---- 247
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+P+ + +NV MY + +F ++G+ K+ VSW
Sbjct: 248 --LPAVSNTTT-----------ENV--------MYVK--------DMFFKMGK-KSLVSW 277
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N +I L+++M+ +G+ + +++L + +L GK +HG++
Sbjct: 278 NVMIGVYMKNAMPVEAVE--LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 311 LKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+ +KL+ + N L+ MYAK G + AR VF+ + DVVS +M+ Y G G +
Sbjct: 336 ER--KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD 393
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIV 427
AV LF ++ G+ P+ I F++ L ACSHAGLL+EG F+LM + + P++ H A +V
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
DLLGRAG + A FI+ M +EP +WGALLGA +H ++G AA K+F+L P SG
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
+VLL+NIYA AGRW+E NIR +MK GLKK P S VE+ +H F+ D +HPQ D+
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDE 573
Query: 548 IIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTS-----P 602
I + + L +++KE+GYVPD+ L V++ +KE +L HSEKLA+ FAL+NT
Sbjct: 574 IYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDS 633
Query: 603 GSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+TIRI KN+R+CGDCH A K ++ I REII+RDTNRFH F G CSCGDYW
Sbjct: 634 NNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 174/375 (46%), Gaps = 49/375 (13%)
Query: 91 LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMI 150
+R R VHS +L+ D+R + + ++ YA D+ AR+VFDE+P ++ + MI
Sbjct: 55 IRTLRTVHSRIILE--DLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112
Query: 151 TGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG 210
Y N + + +F M G RP+ +T ++K C + GR++HG K G
Sbjct: 113 RSYVNNGFYGEGVKVFGTMC--GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 211 FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXX 270
+FVG+ LV MY +CGFL EA+ V DE+ R ++ VSWN+L+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR-RDVVSWNSLVVG-------------- 215
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH--GHMLKSGRKLVGYVGNTLLH- 327
+A+ QR F + +C +E K H G M L+ V NT
Sbjct: 216 -YAQNQR-------FDDALEVCR-----EMESVKISHDAGTMA----SLLPAVSNTTTEN 258
Query: 328 -MYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
MY K +F ++ K +VS N M+ Y ++ EAV L+ +M DG EP+ +
Sbjct: 259 VMYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+ S+L AC L G++ + + + P + ++D+ + G L++A E M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 447 LIEPTAAIWGALLGA 461
+ W A++ A
Sbjct: 371 KSRDVVS-WTAMISA 384
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 324/544 (59%), Gaps = 5/544 (0%)
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
I + ++ Y R G A ++FDEMP +D V+W S+I+GY+ + M+
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
G RPNE T S++ C S +GR +HG K G + V V ++ ++ Y + G L
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTS 187
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+ +F++L KN VSWN +I F +R G+ + T+ A+L S
Sbjct: 188 SCKLFEDLS-IKNLVSWNTMIVIHLQNGLAEKGLA--YFNMSRRVGHEPDQATFLAVLRS 244
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
+G + + +HG ++ G + LL +Y+K G + D+ VF + D ++
Sbjct: 245 CEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAW 304
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-R 412
+ML YA HGFG++A+ F+ M+ GI P+ +TF LL ACSH+GL++EG+ YF+ M +
Sbjct: 305 TAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
++ ++P++ HY+ +VDLLGR+GLL A I+ M +EP++ +WGALLGA ++K ++G
Sbjct: 365 RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGT 424
Query: 473 YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
AA+++FEL+P +V+L+NIY+++G WK+A+ IR +MK GL + CS++E N +
Sbjct: 425 KAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKI 484
Query: 533 HVFVSNDIAHPQKDKIIKMWEKLNQEIK-EIGYVPDTRHVLLFVDQHEKELNLQYHSEKL 591
H FV D +HP+ +KI K +++ +++K E+GY T VL V + KE + HSEK+
Sbjct: 485 HKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKI 544
Query: 592 ALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSC 651
A+AF LL SP I I KN+R+CGDCH K ++LI KR II+RD+ RFHHF DG CSC
Sbjct: 545 AMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSC 604
Query: 652 GDYW 655
DYW
Sbjct: 605 SDYW 608
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
+ V ++HGF +G LV Y R G A+ +FDE+ ++ VSWN+LI
Sbjct: 56 KVVKSVSYRHGF-----IGDQLVGCYLRLGHDVCAEKLFDEMPE-RDLVSWNSLISGYSG 109
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
+ G+ E T+ +++ + GS E+G+ +HG ++K G
Sbjct: 110 RGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
V N ++ Y K+G ++ + K+F+ L ++VS N+M++ + Q+G ++ + F R
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV 229
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL-DR 438
G EP+ TFL++L +C G++ + L+ G ++DL + G L D
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 439 AMSFIEGMLIEPTAAIWGALLGASWMH 465
+ F E + P + W A+L A H
Sbjct: 290 STVFHE--ITSPDSMAWTAMLAAYATH 314
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 156/360 (43%), Gaps = 22/360 (6%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
+I P+ + ++ C G EGR +H L+ V +++ + N+ + Y +
Sbjct: 124 MISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG--LVMKFGVLEEVKVVNAFINWYGK 181
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
GDL + ++F+++ K+ V+W +MI + QN A L F R G P++ T
Sbjct: 182 TGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRR--VGHEPDQATFL 239
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
++++ C + + +HG GF N + ++L+D+Y++ G L ++ VF E+
Sbjct: 240 AVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS- 298
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+ ++W A++ F M G T++ LL + S G +E+GK
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKH--FELMVHYGISPDHVTFTHLLNACSHSGLVEEGK 356
Query: 305 WLHGHMLKSGR---KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG-- 359
M K R +L Y + ++ + +SG + DA + + L+G
Sbjct: 357 HYFETMSKRYRIDPRLDHY--SCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Query: 360 --YAQHGFG-KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
Y G K A LF+ RDG ++ L S +GL + R LM+Q G+
Sbjct: 415 RVYKDTQLGTKAAERLFELEPRDG-----RNYVMLSNIYSASGLWKDASRIRNLMKQKGL 469
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 3/174 (1%)
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
S+L+ + S S+E + LH ++KS G++G+ L+ Y + G A K+FD + +
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 348 VDVVSCNSMLIGYAQHGF-GKEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGE 405
D+VS NS++ GY+ G+ GK VL + M+ + G PN++TFLS+++AC + G +EG
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 406 RYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
L+ +FGV +V ++ G+ G L + E + I+ + W ++
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-WNTMI 207
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
++ GL ++ R EPD+A + +L++C +G +R + +H L+ + I
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHG--LIMFGGFSGNKCIT 273
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
++L +Y++ G LE + VF E+ + D++ WT+M+ YA + DA+ F M+ G
Sbjct: 274 TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH--YG 331
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG-SSLVDMYARCGFLGEA 234
P+ T + L+ C +G+ K D S +VD+ R G L +A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 235 QAVFDELGRWKNEVSWNALI 254
+ E+ + W AL+
Sbjct: 392 YGLIKEMPMEPSSGVWGALL 411
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 338/583 (57%), Gaps = 15/583 (2%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ L C +GR++H L+ + + +I N+++ MY + G++ +R+V +
Sbjct: 365 FTSALAACFTPDFFEKGRILHG--LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP +D V W ++I GYA++E AL F M G S N T+ S++ C L+P G
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS--NYITVVSVLSAC-LLP--G 477
Query: 198 D----GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
D G+ +H GF + V +SL+ MYA+CG L +Q +F+ L +N ++WNA+
Sbjct: 478 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN-RNIITWNAM 536
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
+ L +KM+ G + +F++S L +A+ + LE+G+ LHG +K
Sbjct: 537 LAANAHHGHGEEVLK--LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 594
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
G + ++ N MY+K G I + K+ V + S N ++ +HG+ +E F
Sbjct: 595 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 654
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGR 432
+ML GI+P +TF+SLLTACSH GL+D+G Y+ ++ R FG+EP + H ++DLLGR
Sbjct: 655 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
+G L A +FI M ++P +W +LL + +H ++ G AA+ + +L+P +VL
Sbjct: 715 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774
Query: 493 ANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMW 552
+N++A+ GRW++ N+RK M +KK+ ACSWV++++ V F D HPQ +I
Sbjct: 775 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 834
Query: 553 EKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNI 612
E + + IKE GYV DT L D+ +KE NL HSE+LALA+AL++T GST+RI KN+
Sbjct: 835 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 894
Query: 613 RVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
R+C DCHS K+V+ ++ R I++RD RFHHF G CSC DYW
Sbjct: 895 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 7/355 (1%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
L ++NS++ M G++++A +FD+M +DT++W S+ YAQN ++ +F M R
Sbjct: 195 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 254
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
N T+S+L+ G + GR +HG K GF V V ++L+ MYA G
Sbjct: 255 --FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
EA VF ++ K+ +SWN+L+ L M G V T+++ L
Sbjct: 313 VEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALG--LLCSMISSGKSVNYVTFTSAL 369
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
+ + E+G+ LHG ++ SG +GN L+ MY K G +S++R+V ++ + DVV
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG-LLDEGERYFQL 410
+ N+++ GYA+ +A+ F+ M +G+ N IT +S+L+AC G LL+ G+
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 489
Query: 411 MRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G E ++ + + G L + G L W A+L A+ H
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG-LDNRNIITWNAMLAANAHH 543
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 9/393 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKL-REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
++P + L+ C + G + REG V H + + D+ + ++L +Y G +
Sbjct: 53 GIKPSSFVIASLVTACGRSGSMFREG--VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 110
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
+R+VF+EMP+++ V+WTS++ GY+ + + ++ M G G NE ++S ++
Sbjct: 111 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR--GEGVGCNENSMSLVIS 168
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
CGL+ GRQ+ G K G + V +SL+ M G + A +FD++ ++ +
Sbjct: 169 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTI 227
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWN++ +F+ M+R V T S LL V + G+ +HG
Sbjct: 228 SWNSI--AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
++K G V V NTLL MYA +G +A VF ++ D++S NS++ + G +
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
A+ L M+ G N +TF S L AC ++G L+ G+ +V
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ G+ G + + + M A W AL+G
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVA-WNALIGG 437
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 144/278 (51%), Gaps = 6/278 (2%)
Query: 121 MYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
MY + G ++ AR +FD MP ++ V+W +M++G + ++ + F M G +P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD--LGIKPSS 58
Query: 181 FTLSSLVKCCGLIPS-YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
F ++SLV CG S + +G QVHG K G +V+V ++++ +Y G + ++ VF+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
E+ +N VSW +L+ ++ M+ EG G E + S ++ S +
Sbjct: 119 EMPD-RNVVSWTSLMVGYSDKGEPEEVID--IYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
G+ + G ++KSG + V N+L+ M G++ A +FD++ + D +S NS+
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
YAQ+G +E+ +F M R E N T +LL+ H
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/632 (36%), Positives = 356/632 (56%), Gaps = 29/632 (4%)
Query: 34 NDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLK------TCTK 87
N + E + ++ +RN++ S T + V + G V +L+ R+ + T
Sbjct: 92 NRMIVEARNVFELMPERNVV--SWTAM-VKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 88 LGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWT 147
G + +GR+ + L V+D +V +++ R G ++ AR +FDEM ++ VTWT
Sbjct: 149 GGLIDDGRIDKARKLYDMMPVKD-VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 148 SMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCW 207
+MITGY QN R A LF M E + +S++ L D +
Sbjct: 208 TMITGYRQNNRVDVARKLFEVM------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 208 KHGF--CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
C+ + VG + G + +A+ VFD L ++ +W +I
Sbjct: 262 MKPVIACNAMIVG------FGEVGEISKARRVFD-LMEDRDNATWRGMIKAYERKGFELE 314
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
LFA+MQ++G + + ++L +++ SL+ G+ +H H+++ YV + L
Sbjct: 315 ALD--LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVL 372
Query: 326 LHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
+ MY K G + A+ VFDR D++ NS++ GYA HG G+EA+ +F +M G PN
Sbjct: 373 MTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
+T +++LTACS+AG L+EG F+ M +F V P V HY+ VD+LGRAG +D+AM IE
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE 492
Query: 445 GMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKE 504
M I+P A +WGALLGA H ++++ AA+K+FE +P +G +VLL++I AS +W +
Sbjct: 493 SMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGD 552
Query: 505 AANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIA-HPQKDKIIKMWEKLNQEIKEIG 563
A +RK M+ + + K P CSW+E+ VH+F I HP++ I+ M EK + ++E G
Sbjct: 553 VAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAG 612
Query: 564 YVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMK 623
Y PD HVL VD+ EK +L HSE+LA+A+ LL G IR+MKN+RVCGDCH+A+K
Sbjct: 613 YSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIK 672
Query: 624 YVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
++ + +REII+RD NRFHHF +G CSC DYW
Sbjct: 673 LISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 23/297 (7%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
++V N ++ Y + + AR VF+ MP ++ V+WT+M+ GY Q +A LF M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM- 136
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHG-CCWKHGFCDNVFVGSSLVDMYARCG 229
P +S V GLI DGR + +V ++++ R G
Sbjct: 137 -------PERNEVSWTVMFGGLI---DDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
+ EA+ +FDE+ R +N V+W +I LF M + TE ++++
Sbjct: 187 RVDEARLIFDEM-RERNVVTWTTMI--TGYRQNNRVDVARKLFEVMPEK----TEVSWTS 239
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
+L + G +E + M + ++ N ++ + + G IS AR+VFD + D
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVM--PMKPVIAC--NAMIVGFGEVGEISKARRVFDLMEDRD 295
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+ M+ Y + GF EA+ LF QM + G+ P+ + +S+L+ C+ L G +
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/533 (39%), Positives = 312/533 (58%), Gaps = 8/533 (1%)
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
GD+ +ARQVFDEM W ++ GY +N+ ++L+L+ M G RP+EFT
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM--RDLGVRPDEFTYPF 114
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
+VK + + G +H K+GF V + LV MY + G L A+ +F+ + + K
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM-QVK 173
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ V+WNA + F KM + FT ++L + +GSLE G+
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEY--FNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEE 231
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
++ K V N L M+ K G+ AR +F+ + + +VVS ++M++GYA +G
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG---VEPKVSH 422
+EA+ LF M +G+ PN +TFL +L+ACSHAGL++EG+RYF LM Q +EP+ H
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
YA +VDLLGR+GLL+ A FI+ M +EP IWGALLGA +H+ + +G A + E
Sbjct: 352 YACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETA 411
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAH 542
P HVLL+NIYA+AG+W +R M+ G KK A S VE E +H F D +H
Sbjct: 412 PDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSH 471
Query: 543 PQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSP 602
PQ I + +++ ++I+++GYVPDT V V+ EKE +L +HSEKLA+AF L+ P
Sbjct: 472 PQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRP 531
Query: 603 GSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
G IR+MKN+R C DCH+ K+V+ + EII+RD NRFHHF +G CSC ++W
Sbjct: 532 GHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 7/247 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V PD Y ++K ++LG G +H+H + ++ ++ MY + G+L
Sbjct: 104 GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG--IVATELVMMYMKFGELS 161
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
A +F+ M KD V W + + Q + AL F M + + FT+ S++
Sbjct: 162 SAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC--ADAVQFDSFTVVSMLSA 219
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
CG + S G +++ K N+ V ++ +DM+ +CG A+ +F+E+ + +N VS
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM-KQRNVVS 278
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W+ +I LF MQ EG T+ +L + S G + +GK
Sbjct: 279 WSTMI--VGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 310 MLKSGRK 316
M++S K
Sbjct: 337 MVQSNDK 343
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 3/247 (1%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
+++H + GF + + + L++ G + A+ VFDE+ + + + WN L
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFL-WNTLF--KGY 84
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
L+ KM+ G EFTY ++ + S +G G LH H++K G +G
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
V L+ MY K G +S A +F+ + D+V+ N+ L Q G A+ F +M D
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
++ + T +S+L+AC G L+ GE + R+ ++ + +D+ + G + A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 440 MSFIEGM 446
E M
Sbjct: 265 RVLFEEM 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
S L + + AV+ D +L C +LG L G ++ + ++ +++++
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDR--ARKEEIDCNIIVE 248
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
N+ L M+ +CG+ E AR +F+EM ++ V+W++MI GYA N + +AL LF M G
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTM--QNEG 306
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-----------HGFCDNVFVGSSLVDM 224
RPN T ++ C +G++ + H C +VD+
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC--------MVDL 358
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALI 254
R G L EA ++ + W AL+
Sbjct: 359 LGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
+T+ S LL ++SS +Q K +H +L++G + LL G + AR+V
Sbjct: 8 LTKQMLSELLRASSS--KPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
FD + K + N++ GY ++ E+++L+K+M G+ P++ T+ ++ A S G
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 402 DEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
G + ++G ++V + + G L A E M ++ A W A L
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA-WNAFLA 183
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/583 (37%), Positives = 336/583 (57%), Gaps = 11/583 (1%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y LL C L G + S +L NP +R + + + ++ +++ C L+ AR++FD+
Sbjct: 134 YTDLLHACISAKSLHHGIKICS-LILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDD 192
Query: 138 MPNKDTVT---WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
+ + +T W +M GY++N DAL+++ DML S P F++S +K C +
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML--CSFIEPGNFSISVALKACVDLK 250
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
GR +H K + V + L+ +Y G +A+ VFD + +N V+WN+LI
Sbjct: 251 DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSE-RNVVTWNSLI 309
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
LF KMQ E G + T + +L + S V +L GK +H +LKS
Sbjct: 310 SVLSKKVRVHEMFN--LFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSK 367
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
K + N+L+ MY K G + +R+VFD ++ D+ S N ML YA +G +E + LF+
Sbjct: 368 EKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE 427
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRA 433
M+ G+ P+ ITF++LL+ CS GL + G F+ M+ +F V P + HYA +VD+LGRA
Sbjct: 428 WMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRA 487
Query: 434 GLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLA 493
G + A+ IE M +P+A+IWG+LL + +H + +G AA+++F L+P G +V+++
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS-NDIAHPQKDKIIKMW 552
NIYA A W IR+MMK G+KKE CSWV++++ + +FV+ D+ K+W
Sbjct: 548 NIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVW 607
Query: 553 EKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNI 612
+L + I++ GY P+T VL VD+ K + HSE+LA ++L++T G IRI KN+
Sbjct: 608 TELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNL 667
Query: 613 RVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
RVC DCHS MK V+ + +R I++RDT RFHHF DG CSC DYW
Sbjct: 668 RVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 16/352 (4%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+EP LK C L LR GR +H+ + + V D V+ N +L +Y G +
Sbjct: 232 IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV--DQVVYNVLLKLYMESGLFDD 289
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFD M ++ VTW S+I+ ++ R + LF M G + TL++++ C
Sbjct: 290 ARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPAC 347
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ + G+++H K +V + +SL+DMY +CG + ++ VFD + K+ SW
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLT-KDLASW 406
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N I LF M G T+ ALL S G E G L M
Sbjct: 407 N--IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM 464
Query: 311 LKSGR---KLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFG 366
R L Y L+ + ++G I +A KV + + K S+L HG
Sbjct: 465 KTEFRVSPALEHYA--CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Query: 367 KEAVVLFKQMLRDGIEP-NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
+ K++ +EP N ++ + + A + D ++ ++M+Q GV+
Sbjct: 523 SVGEIAAKELFV--LEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVK 572
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 334/581 (57%), Gaps = 12/581 (2%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ +LK CT+ + G +HS L+ D+ S+L +Y+ G L A ++FDE
Sbjct: 114 FPLVLKACTRASSRKLGIDLHS--LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDE 171
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
+P++ VTWT++ +GY + R +A+ LF M+ G +P+ + + ++ C +
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE--MGVKPDSYFIVQVLSACVHVGDLD 229
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G + + N FV ++LV++YA+CG + +A++VFD + K+ V+W+ +I
Sbjct: 230 SGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE-KDIVTWSTMIQGY 288
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
LF +M +E +F+ L S +S+G+L+ G+W G L +
Sbjct: 289 ASNSFPKEGIE--LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--GISLIDRHEF 344
Query: 318 VG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
+ ++ N L+ MYAK G+++ +VF + + D+V N+ + G A++G K + +F Q
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 376 MLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAG 434
+ GI P+ TFL LL C HAGL+ +G R+F + + ++ V HY +VDL GRAG
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 435 LLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLAN 494
+LD A I M + P A +WGALL + K ++ +++ L+P+ +G +V L+N
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 495 IYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEK 554
IY+ GRW EAA +R MM G+KK P SW+E+E VH F+++D +HP DKI E
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 555 LNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRV 614
L E++ +G+VP T V V++ EKE L YHSEKLA+A L++T G IR++KN+RV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 615 CGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
CGDCH MK ++ I +REI+VRD NRFH F +G CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 175/385 (45%), Gaps = 6/385 (1%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERA 159
H L N + D + N +L +++ +F + + S+I G+ N
Sbjct: 33 HVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLF 92
Query: 160 VDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGS 219
+ L LF + + G + FT ++K C S G +H K GF +V +
Sbjct: 93 HETLDLFLSIRK--HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 220 SLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
SL+ +Y+ G L +A +FDE+ ++ V+W AL LF KM G
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALF--SGYTTSGRHREAIDLFKKMVEMG 207
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR 339
+ +L + VG L+ G+W+ +M + + +V TL+++YAK G + AR
Sbjct: 208 VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKAR 267
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
VFD +V+ D+V+ ++M+ GYA + F KE + LF QML++ ++P+ + + L++C+ G
Sbjct: 268 SVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLG 327
Query: 400 LLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
LD GE L+ + + ++D+ + G + R + M + + A+
Sbjct: 328 ALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 460 G-ASWMHKKIEMGAYAAQKVFELDP 483
G A H K+ + + + P
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISP 412
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/549 (40%), Positives = 316/549 (57%), Gaps = 7/549 (1%)
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
+ + + N ++ Y R GDL +AR+VFDEMP++ TW +MI G Q E + L LF +
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M G G P+E+TL S+ + S G+Q+HG K+G ++ V SSL MY R
Sbjct: 82 M--HGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
G L + + V + +N V+WN LI L+ M+ G + T+
Sbjct: 140 GKLQDGEIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLY--LYKMMKISGCRPNKITFV 196
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+L S S + QG+ +H +K G V V ++L+ MY+K G + DA K F
Sbjct: 197 TVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE 256
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITFLSLLTACSHAGLLDEGERY 407
D V +SM+ Y HG G EA+ LF M + +E N++ FL+LL ACSH+GL D+G
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 408 FQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHK 466
F +M ++G +P + HY +VDLLGRAG LD+A + I M I+ IW LL A +HK
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 467 KIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
EM +++ ++DP S +VLLAN++ASA RW++ + +RK M+D +KKE SW
Sbjct: 377 NAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 436
Query: 527 EIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQY 586
E + VH F D + + +I ++L E+K GY PDT VL +D+ EKE +L
Sbjct: 437 EHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQ 496
Query: 587 HSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCD 646
HSEKLA+AFAL+ G+ IRI+KN+RVC DCH A KY+++I REI +RD +RFHHF +
Sbjct: 497 HSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFIN 556
Query: 647 GFCSCGDYW 655
G CSCGDYW
Sbjct: 557 GKCSCGDYW 565
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 148/324 (45%), Gaps = 12/324 (3%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + L + G+ +H + + ++ DLV+ +S+ MY R G L+
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL--DLVVNSSLAHMYMRNGKLQDGE 146
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
V MP ++ V W ++I G AQN L L+ M SG RPN+ T +++ C
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMM--KISGCRPNKITFVTVLSSCSD 204
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ G G+Q+H K G V V SSL+ MY++CG LG+A F E ++EV W++
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED-EDEVMWSS 263
Query: 253 LIXXXXXXXXXXXXXXXXLFAKM-QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
+I LF M ++ + E + LL + S G ++G L M+
Sbjct: 264 MI--SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321
Query: 312 -KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEA 369
K G K ++ + ++G + A + + +K D+V ++L H + A
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMA 381
Query: 370 VVLFKQMLRDGIEPNDITFLSLLT 393
+FK++L+ I+PND LL
Sbjct: 382 QRVFKEILQ--IDPNDSACYVLLA 403
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+T L++ ++ P++ + +L +C+ L +G+ +H+ + + + +
Sbjct: 174 ETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI--KIGASSVVAVVS 231
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
S++ MY++CG L A + F E ++D V W+SMI+ Y + + +A+ LF M +
Sbjct: 232 SLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE-QTNM 290
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHG-CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
NE +L+ C G ++ K+GF + + +VD+ R G L +A+
Sbjct: 291 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 236 AVFDELGRWKNEVSWNALI 254
A+ + + V W L+
Sbjct: 351 AIIRSMPIKTDIVIWKTLL 369
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 353/657 (53%), Gaps = 84/657 (12%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + L K C +L + G+ +H + D+ D +Q S+ MY RCG + AR
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM--DAFVQGSMFHMYMRCGRMGDAR 171
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS------------------ 174
+VFD M +KD VT ++++ YA+ + + + +M G
Sbjct: 172 KVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Query: 175 ---------------GSRPNEFTLSSLVKCCGLIPSYGD------GRQVHGCCWKHGFCD 213
G P++ T+SS+ +PS GD GR +HG K G
Sbjct: 232 YHKEAVVMFQKIHHLGFCPDQVTVSSV------LPSVGDSEMLNMGRLIHGYVIKQGLLK 285
Query: 214 NVFVGSSLVDMYARCGFLGEAQAVFDELGRWK---------------------------- 245
+ V S+++DMY + G + ++F++ +
Sbjct: 286 DKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFK 345
Query: 246 ------NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
N VSW ++I LF +MQ G T ++L + ++ +
Sbjct: 346 EQTMELNVVSWTSIIAGCAQNGKDIEALE--LFREMQVAGVKPNHVTIPSMLPACGNIAA 403
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
L G+ HG ++ +VG+ L+ MYAK G I+ ++ VF+ + ++V NS++ G
Sbjct: 404 LGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNG 463
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEP 418
++ HG KE + +F+ ++R ++P+ I+F SLL+AC GL DEG +YF++M ++G++P
Sbjct: 464 FSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV 478
++ HY+ +V+LLGRAG L A I+ M EP + +WGALL + + +++ AA+K+
Sbjct: 524 RLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKL 583
Query: 479 FELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
F L+P G +VLL+NIYA+ G W E +IR M+ GLKK P CSW++++N V+ ++
Sbjct: 584 FHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAG 643
Query: 539 DIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALL 598
D +HPQ D+I + +++++E+++ G+ P+ L V++ E+E L HSEKLA+ F LL
Sbjct: 644 DKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLL 703
Query: 599 NTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
NT G+ ++++KN+R+CGDCH+ +K+++ REI +RDTNRFHHF DG CSCGD+W
Sbjct: 704 NTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
Q H K G ++ ++ + L+ Y+ +A V + S+++LI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPD-PTIYSFSSLIYALTKA 94
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
+F++M G L + + + + GK +H SG + +
Sbjct: 95 KLFTQSIG--VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
V ++ HMY + G + DARKVFDR+ DVV+C+++L YA+ G +E V + +M G
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM 440
IE N +++ +L+ + +G E FQ + G P + ++ +G + +L+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG- 271
Query: 441 SFIEGMLIE 449
I G +I+
Sbjct: 272 RLIHGYVIK 280
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 5/187 (2%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
V+P+ +L C + L GR H + + D++ + ++++ MYA+CG +
Sbjct: 382 AGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV--RVHLLDNVHVGSALIDMYAKCGRI 439
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
++ VF+ MP K+ V W S++ G++ + +A + + +F ++R + +P+ + +SL+
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR--TRLKPDFISFTSLLS 497
Query: 189 CCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
CG + +G + ++G + S +V++ R G L EA + E+ +
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 248 VSWNALI 254
W AL+
Sbjct: 558 CVWGALL 564
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/606 (35%), Positives = 331/606 (54%), Gaps = 12/606 (1%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K L + + R + P+ + LK C L L +G +H L ++ + + N
Sbjct: 89 KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE--VGN 146
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
S++ MY++CG + A +VF + ++ ++W +MI G+ AL F M
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF-C-DNVFVGSSLVDMYARCGFLGEA 234
RP+EFTL+SL+K C G+Q+HG + GF C + + SLVD+Y +CG+L A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
+ FD++ + K +SW++LI LF ++Q + F S+++
Sbjct: 267 RKAFDQI-KEKTMISWSSLILGYAQEGEFVEAMG--LFKRLQELNSQIDSFALSSIIGVF 323
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCN 354
+ L QGK + +K L V N+++ MY K G + +A K F + DV+S
Sbjct: 324 ADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWT 383
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQ 413
++ GY +HG GK++V +F +MLR IEP+++ +L++L+ACSH+G++ EGE F +L+
Sbjct: 384 VVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 443
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
G++P+V HYA +VDLLGRAG L A I+ M I+P IW LL +H IE+G
Sbjct: 444 HGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
+ + +D +V+++N+Y AG W E N R++ GLKKE SWVEIE VH
Sbjct: 504 VGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563
Query: 534 VFVSNDIAHPQKDKIIKMWEKLNQEIK-EIGYVPDTRHVLLFVDQHEKELNLQYHSEKLA 592
F S + +HP I + ++ + ++ E+GYV +H L +D KE NL+ HSEKLA
Sbjct: 564 FFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLA 623
Query: 593 LAFALLN---TSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFC 649
+ AL G TIR+ KN+RVC DCH +K ++ I K +VRD RFH F DG C
Sbjct: 624 IGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCC 683
Query: 650 SCGDYW 655
SCGDYW
Sbjct: 684 SCGDYW 689
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 195/363 (53%), Gaps = 11/363 (3%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+L+ CT+ G +G VH + L + +L+ N ++ MY +C + A +VFD MP
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGL--NLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
++ V+W+++++G+ N +L LF +M G G PNEFT S+ +K CGL+ + G
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEM--GRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
Q+HG C K GF V VG+SLVDMY++CG + EA+ VF + ++ +SWNA+I
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHA 186
Query: 261 XXXXXXXXXXLFAKMQREGYG--VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL- 317
F MQ EFT ++LL + SS G + GK +HG +++SG
Sbjct: 187 GYGSKALDT--FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 318 -VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
+ +L+ +Y K G + ARK FD++ + ++S +S+++GYAQ G EA+ LFK++
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL 436
+ + S++ + LL +G++ L + + S +VD+ + GL+
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 437 DRA 439
D A
Sbjct: 365 DEA 367
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
Query: 178 PNEF-TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
PN+ L S+++ C G QVH K G N+ + L+DMY +C A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
VFD + +N VSW+AL+ LF++M R+G EFT+S L +
Sbjct: 63 VFDSMPE-RNVVSWSALM--SGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
+ +LE+G +HG LK G +++ VGN+L+ MY+K G I++A KVF R+V ++S N+M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIE--PNDITFLSLLTACSHAGLLDEGERY--FQLMR 412
+ G+ G+G +A+ F M I+ P++ T SLL ACS G++ G++ F +
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
F + +VDL + G L A + + E T W +L+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFD-QIKEKTMISWSSLI 285
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 2/168 (1%)
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
G +QG +H ++LKSG L N L+ MY K A KVFD + + +VVS ++++
Sbjct: 20 GLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALM 79
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
G+ +G K ++ LF +M R GI PN+ TF + L AC L++G + + G E
Sbjct: 80 SGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFE 139
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
V +VD+ + G ++ A +++ + W A++ A ++H
Sbjct: 140 MMVEVGNSLVDMYSKCGRINEAEKVFR-RIVDRSLISWNAMI-AGFVH 185
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 327/590 (55%), Gaps = 12/590 (2%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
G P+ + + K+C+ G++ EG+ H FL + ++N++++MY+ C
Sbjct: 130 GESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHE--FVRNTLVYMYSLCSGN 187
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP--NEFTLSSL 186
A +V D++P D ++S ++GY + + L D+LR + N T S
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGL----DVLRKTANEDFVWNNLTYLSS 243
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
++ + QVH + GF V +L++MY +CG + AQ VFD+
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTH--AQ 301
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
+ N I LF+KM + E+T++ LL S + + L+QG L
Sbjct: 302 NIFLNTTIMDAYFQDKSFEEALN-LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
HG +LKSG + VGN L++MYAKSGSI DARK F + D+V+ N+M+ G + HG G
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAK 425
+EA+ F +M+ G PN ITF+ +L ACSH G +++G YF QLM++F V+P + HY
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
IV LL +AG+ A F+ IE W LL A ++ + +G A+ E P
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND 540
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQK 545
SG +VLL+NI+A + W+ A +R +M + G+KKEP SW+ I N HVF++ D HP+
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEI 600
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGST 605
I +++ +IK +GY PD VD+ ++E NL YHSEKLA+A+ L+ T S
Sbjct: 601 TLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSP 660
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+ + KN+R+C DCHSA+K ++ I KR I++RD+NRFHHF DG CSC DYW
Sbjct: 661 LYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 6/388 (1%)
Query: 79 QRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ-NSVLFMYARCGDLEHARQVFDE 137
LLK C LR G +H+H ++ N R + Q NS++ +Y +C + AR++FD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP ++ V+W +M+ GY + + L LF M G SRPNEF + + K C
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGE-SRPNEFVATVVFKSCSNSGRIE 153
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
+G+Q HGC K+G + FV ++LV MY+ C GEA V D+L V +AL
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL---S 210
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
+ K E + TY + L S++ L +H M++ G
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
L++MY K G + A++VFD ++ +++ Y Q +EA+ LF +M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLD 437
+ PN+ TF LL + + LL +G+ L+ + G V +V++ ++G ++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 438 RAMSFIEGMLIEPTAAIWGALLGASWMH 465
A GM W ++ H
Sbjct: 391 DARKAFSGMTFRDIVT-WNTMISGCSHH 417
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/545 (37%), Positives = 325/545 (59%), Gaps = 7/545 (1%)
Query: 113 VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
++ N+ + YA+CG L +A++VF + +K +W ++I G+AQ+ L L +
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP--RLSLDAHLQMK 488
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
SG P+ FT+ SL+ C + S G++VHG ++ ++FV S++ +Y CG L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
QA+FD + K+ VSWN +I +F +M G + + +
Sbjct: 549 TVQALFDAMED-KSLVSWNTVITGYLQNGFPDRALG--VFRQMVLYGIQLCGISMMPVFG 605
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVS 352
+ S + SL G+ H + LK + ++ +L+ MYAK+GSI+ + KVF+ L + S
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 353 CNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLM 411
N+M++GY HG KEA+ LF++M R G P+D+TFL +LTAC+H+GL+ EG RY Q+
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI-EGMLIEPTAAIWGALLGASWMHKKIEM 470
FG++P + HYA ++D+LGRAG LD+A+ + E M E IW +LL + +H+ +EM
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 471 GAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIEN 530
G A K+FEL+P +VLL+N+YA G+W++ +R+ M + L+K+ CSW+E+
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNR 845
Query: 531 SVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEK 590
V FV + ++I +W L +I ++GY PDT V + + EK L+ HSEK
Sbjct: 846 KVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEK 905
Query: 591 LALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCS 650
LAL + L+ TS G+TIR+ KN+R+C DCH+A K ++ +++REI+VRD RFHHF +G CS
Sbjct: 906 LALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCS 965
Query: 651 CGDYW 655
CGDYW
Sbjct: 966 CGDYW 970
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 192/413 (46%), Gaps = 18/413 (4%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
LL+ K + GR +H + + +R+D V+ ++ MYA CG + +R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
K+ W ++I+ Y++NE + L F +M+ + P+ FT ++K C + G G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMI-STTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
VHG K G ++VFVG++LV Y GF+ +A +FD + +N VSWN++I
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE-RNLVSWNSMI--RVFS 264
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ----GKWLHGHMLKSGRK 316
L +M E A L + V + E+ GK +HG +K
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
+ N L+ MY+K G I++A+ +F +VVS N+M+ G++ G + +QM
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 377 LRDG--IEPNDITFLSLLTACSHAGLLDEGERY--FQLMRQFGVEPKVSHYAKIVDLLGR 432
L G ++ +++T L+ + C H L + + L ++F V++ V +
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAK 442
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLG--ASWMHKKIEMGAYAAQKVFELDP 483
G L A G+ T W AL+G A ++ + A+ K+ L P
Sbjct: 443 CGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 227/545 (41%), Gaps = 62/545 (11%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
+++I + PD Y ++K C + + G VH L+ + +D+ + N+++ Y
Sbjct: 175 IEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG--LVVKTGLVEDVFVGNALVSFY 232
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR--GGSGSRPNE 180
G + A Q+FD MP ++ V+W SMI ++ N + ++ +L +M+ G P+
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
TL +++ C G G+ VHG K + + ++L+DMY++CG + AQ +F +
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-K 351
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
+ KN VSWN ++ E E T + L
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
K LH + LK V N + YAK GS+S A++VF + V S N+++ G+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGH 471
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
AQ + ++ QM G+ P+ T SLL+ACS L G+ + + +E +
Sbjct: 472 AQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGM----LIEPTAAIWGAL------------------ 458
Y ++ L G L + + M L+ I G L
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 459 ------------LGASWMHKKIEMG----AYAAQKVFELDPFYSGAHVLLANIYASAGRW 502
GA + + +G AYA + + E D F + + L ++YA G
Sbjct: 592 GIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS---LIDMYAKNGSI 648
Query: 503 KEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEI 562
+++ + +GLK++ SW + + H + IK++E E++
Sbjct: 649 TQSSKVF-----NGLKEKSTASW-------NAMIMGYGIHGLAKEAIKLFE----EMQRT 692
Query: 563 GYVPD 567
G+ PD
Sbjct: 693 GHNPD 697
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD LL C+KL LR G+ VH F+++N RD L + SVL +Y CG+L +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHG-FIIRNWLERD-LFVYLSVLSLYIHCGELCTVQ 551
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+FD M +K V+W ++ITGY QN AL +F M+ G + ++ + C L
Sbjct: 552 ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL--YGIQLCGISMMPVFGACSL 609
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+PS GR+ H KH D+ F+ SL+DMYA+ G + ++ VF+ L + K+ SWNA
Sbjct: 610 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL-KEKSTASWNA 668
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+I LF +MQR G+ + T+ +L + + G + +G
Sbjct: 669 MI--MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 717
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 342/614 (55%), Gaps = 43/614 (7%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y L+ C + L + +H+H + + + N+++ +Y +CG HA QVFDE
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIV--KLGIVQCCPLANTLVNVYGKCGAASHALQVFDE 63
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP++D + W S++T Q + L +F + SG RP++F S+LVK C + S
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVF-SSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
GRQVH + ++ V SSLVDMYA+CG L A+AVFD + R KN +SW A++
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI-RVKNTISWTAMVSGY 181
Query: 258 XXXXXXXXX-----------------------------XXXXLFAKMQREGYGVTE-FTY 287
+F +M+RE + +
Sbjct: 182 AKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVL 241
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
S+++ + +++ + G+ +HG ++ G ++ N L+ MYAK + A+ +F R+
Sbjct: 242 SSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH 301
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
DVVS S+++G AQHG ++A+ L+ M+ G++PN++TF+ L+ ACSH G +++G
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
Query: 408 FQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHK 466
FQ M + +G+ P + HY ++DLLGR+GLLD A + I M P W ALL A
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Query: 467 KIEMGAYAAQKV---FEL-DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
+ +MG A + F+L DP ++LL+NIYASA W + + R+ + + ++K+P
Sbjct: 422 RGQMGIRIADHLVSSFKLKDP---STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPG 478
Query: 523 CSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIK-EIGYVPDTRHVLLFVDQHEKE 581
S VE+ VF + + +HP K+ I ++ +KL +E++ GYVPDT +L +D+ EKE
Sbjct: 479 HSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKE 538
Query: 582 LNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRF 641
L +HSE+ A+A+ LL PG+ IRI+KN+RVCGDCH +K+++ I +REIIVRD R+
Sbjct: 539 KLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRY 598
Query: 642 HHFCDGFCSCGDYW 655
HHF G CSC D+W
Sbjct: 599 HHFKGGKCSCNDFW 612
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 5/182 (2%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D + ++ C L GR VH + D + I N+++ MYA+C D+ A+
Sbjct: 237 DPLVLSSIVGACANLAASIAGRQVHGLVIALGFD--SCVFISNALIDMYAKCSDVIAAKD 294
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
+F M ++D V+WTS+I G AQ+ +A AL L+ DM+ G +PNE T L+ C +
Sbjct: 295 IFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV--SHGVKPNEVTFVGLIYACSHV 352
Query: 194 PSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
GR++ K +G ++ + L+D+ R G L EA+ + + +E +W A
Sbjct: 353 GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 253 LI 254
L+
Sbjct: 413 LL 414
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 18/186 (9%)
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
+ + + LC+ + +L K LH H++K G + NTL+++Y K G+ S A +V
Sbjct: 3 IPHYLHQLQLCARNR--TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQV 60
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGF-GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
FD + D ++ S+L Q GK V G+ P+D F +L+ AC++ G
Sbjct: 61 FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGS 120
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAK-------IVDLLGRAGLLDRAMSFIEGMLIEPTAA 453
+D G RQ VS YA +VD+ + GLL+ A + + + ++ T +
Sbjct: 121 IDHG-------RQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS 173
Query: 454 IWGALL 459
W A++
Sbjct: 174 -WTAMV 178
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/567 (37%), Positives = 322/567 (56%), Gaps = 41/567 (7%)
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
YA G + H+ +F + + D +T+ I + N A +L+ +L S PNEF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLL--SSEINPNEF 131
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
T SSL+K C S G+ +H K G + +V + LVD+YA+ G + AQ VFD +
Sbjct: 132 TFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 242 GR------------------------------WKNEVSWNALIXXXXXXXXXXXXXXXXL 271
++ VSWN +I L
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM--L 245
Query: 272 FAKMQREGYGVT-EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
F K+ EG E T A L + S +G+LE G+W+H + S +L V L+ MY+
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYS 305
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR-DGIEPNDITFL 389
K GS+ +A VF+ + D+V+ N+M+ GYA HG+ ++A+ LF +M G++P DITF+
Sbjct: 306 KCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFI 365
Query: 390 SLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
L AC+HAGL++EG R F+ M Q +G++PK+ HY +V LLGRAG L RA I+ M +
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
Query: 449 EPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANI 508
+ + +W ++LG+ +H +G A+ + L+ SG +VLL+NIYAS G ++ A +
Sbjct: 426 DADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKV 485
Query: 509 RKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDT 568
R +MK+ G+ KEP S +EIEN VH F + D H + +I M K+++ IK GYVP+T
Sbjct: 486 RNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNT 545
Query: 569 RHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLI 628
VL +++ EKE +LQ HSE+LA+A+ L++T PGS ++I KN+RVC DCH+ K ++ I
Sbjct: 546 NTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKI 605
Query: 629 VKREIIVRDTNRFHHFCDGFCSCGDYW 655
R+I++RD NRFHHF DG CSCGD+W
Sbjct: 606 TGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 38/263 (14%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFL------------------LQNPDV---- 108
+ P+ + LLK+C+ + G+L+H+H L + DV
Sbjct: 126 INPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQ 181
Query: 109 -------RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVD 161
LV +++ YA+ G++E AR +FD M +D V+W MI GYAQ+ D
Sbjct: 182 KVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 162 ALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL 221
AL+LF +L G +P+E T+ + + C I + GR +H NV V + L
Sbjct: 242 ALMLFQKLLAEGK-PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 222 VDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQR-EGY 280
+DMY++CG L EA VF++ R K+ V+WNA+I LF +MQ G
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPR-KDIVAWNAMI--AGYAMHGYSQDALRLFNEMQGITGL 357
Query: 281 GVTEFTYSALLCSASSVGSLEQG 303
T+ T+ L + + G + +G
Sbjct: 358 QPTDITFIGTLQACAHAGLVNEG 380
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
L+ G +PD L C+++G L GR +H +++ +R ++ + ++ MY++
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIH--VFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
CG LE A VF++ P KD V W +MI GYA + + DAL LF +M +G +G +P + T
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM-QGITGLQPTDITFI 365
Query: 185 SLVKCCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
++ C +G R ++G + LV + R G L A +
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM 425
Query: 244 WKNEVSWNALI 254
+ V W++++
Sbjct: 426 DADSVLWSSVL 436
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 330/587 (56%), Gaps = 15/587 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+V+PD ++ C LG R GR +H++ + V D+ + NS+ MY G
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV--DISVCNSLTQMYLNAGSWR 349
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
A ++F M KD V+WT+MI+GY N ++A+D + +P+E T++++
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ-----DSVKPDEITVAAV 404
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ C + G ++H K V V ++L++MY++C + +A +F + R KN
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPR-KN 463
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
+SW ++I +F + + T +A L + + +G+L GK +
Sbjct: 464 VISWTSIIAGLRLNNRCFEAL---IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEI 520
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H H+L++G L ++ N LL MY + G ++ A F+ K DV S N +L GY++ G G
Sbjct: 521 HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQG 579
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
V LF +M++ + P++ITF+SLL CS + ++ +G YF M +GV P + HYA +
Sbjct: 580 SMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACV 639
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLLGRAG L A FI+ M + P A+WGALL A +H KI++G +AQ +FELD
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSV 699
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKD 546
G ++LL N+YA G+W+E A +R+MMK++GL + CSWVE++ VH F+S+D HPQ
Sbjct: 700 GYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTK 759
Query: 547 KIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTI 606
+I + E +++ E+G + + + ++ HSE+ A+AF L+NT PG I
Sbjct: 760 EINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPI 819
Query: 607 RIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGD 653
+ KN+ +C +CH +K+++ V+REI VRD FHHF DG CSCGD
Sbjct: 820 WVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 198/393 (50%), Gaps = 14/393 (3%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
G V+PD + +L+TC + L G+ VH H + ++ D+V N+++ MY +CGD+
Sbjct: 190 GGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVKCGDV 247
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
+ AR +FD MP +D ++W +MI+GY +N + L LF M RG S P+ TL+S++
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM-RGLSVD-PDLMTLTSVIS 305
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C L+ GR +H GF ++ V +SL MY G EA+ +F + R K+ V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-KDIV 364
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SW +I + M ++ E T +A+L + +++G L+ G LH
Sbjct: 365 SWTTMISGYEYNFLPDKAIDT--YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 309 HMLKSGRKLVGY--VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
+K+ +L+ Y V N L++MY+K I A +F + + +V+S S++ G +
Sbjct: 423 LAIKA--RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
EA++ +QM + ++PN IT + L AC+ G L G+ + + GV +
Sbjct: 481 FEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+D+ R G ++ A S + T+ W LL
Sbjct: 540 LDMYVRCGRMNTAWSQFNSQKKDVTS--WNILL 570
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 197/390 (50%), Gaps = 6/390 (1%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ + +L+ + V D ++ L++ C EG V+S L + +L N
Sbjct: 76 EEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL--GN 133
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+ L M+ R G+L A VF +M ++ +W ++ GYA+ +A+ L+ ML G G
Sbjct: 134 AFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG-GV 192
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
+P+ +T +++ CG IP G++VH ++G+ ++ V ++L+ MY +CG + A+
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
+FD + R ++ +SWNA+I LF M+ T ++++ +
Sbjct: 253 LFDRMPR-RDIISWNAMI--SGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
+G G+ +H +++ +G + V N+L MY +GS +A K+F R+ + D+VS +M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+ GY + +A+ ++ M +D ++P++IT ++L+AC+ G LD G +L + +
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
V ++++ + +D+A+ +
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNI 459
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L MQ V E + AL+ + E+G ++ L S L +GN L M+
Sbjct: 81 LLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFV 140
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITFL 389
+ G++ DA VF ++ + ++ S N ++ GYA+ G+ EA+ L+ +ML G++P+ TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFP 200
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
+L C L G+ + ++G E + ++ + + G + A + M
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRM--- 257
Query: 450 PTAAI--WGALLGASW----MHKKIEMGAYAAQKVFELDP 483
P I W A++ + H+ +E+ + A + +DP
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEGLEL--FFAMRGLSVDP 295
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/593 (35%), Positives = 334/593 (56%), Gaps = 26/593 (4%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQN-PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
L +TC+ + +L++ +H+ L P+ L + +L + + D+ +A +VFD +
Sbjct: 54 LAETCSDMSQLKQ---LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 140 NKDTVTWTSMITGYAQN-ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
N + W ++I A + R +A +L+ ML G S P++ T ++K C I + +
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESS-PDKHTFPFVLKACAYIFGFSE 169
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G+QVH KHGF +V+V + L+ +Y CG L A+ VFDE+ ++ VSWN++I
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPE-RSLVSWNSMIDALV 228
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
LF +MQR + +T ++L + + +GSL G W H +L+ V
Sbjct: 229 RFGEYDSALQ--LFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 319 GY---VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
V N+L+ MY K GS+ A +VF + K D+ S N+M++G+A HG +EA+ F +
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 376 ML--RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGR 432
M+ R+ + PN +TF+ LL AC+H G +++G +YF +M R + +EP + HY IVDL+ R
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH-KKIEMGAYAAQKVF-------ELDPF 484
AG + A+ + M ++P A IW +LL A +E+ A+ + +
Sbjct: 406 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 465
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
SGA+VLL+ +YASA RW + +RK+M + G++KEP CS +EI H F + D +HPQ
Sbjct: 466 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQ 525
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVLLF--VDQHEKELNLQYHSEKLALAFALLNTSP 602
+I + + ++ ++ IGY+PD L + KE +L+ HSE+LA+AF L+N P
Sbjct: 526 TKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPP 585
Query: 603 GSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+ IRI KN+RVC DCH K ++ + EIIVRD RFHHF DG CSC DYW
Sbjct: 586 QTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 150/329 (45%), Gaps = 29/329 (8%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
R+ + + +++RG PD+ + +LK C + EG+ VH + D+
Sbjct: 130 RKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHG--FGGDVY 187
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ N ++ +Y CG L+ AR+VFDEMP + V+W SMI + AL LF +M R
Sbjct: 188 VNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-- 245
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF----CD-----NVFVGSSLVDM 224
P+ +T+ S++ C + S G W H F CD +V V +SL++M
Sbjct: 246 -SFEPDGYTMQSVLSACAGLGSLSLG------TWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM--QREGYGV 282
Y +CG L A+ VF + + ++ SWNA+I F +M +RE
Sbjct: 299 YCKCGSLRMAEQVFQGMQK-RDLASWNAMI--LGFATHGRAEEAMNFFDRMVDKRENVRP 355
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDA-R 339
T+ LL + + G + +G+ M++ + + G ++ + A++G I++A
Sbjct: 356 NSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG-CIVDLIARAGYITEAID 414
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
V +K D V S+L + G E
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVE 443
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/531 (37%), Positives = 315/531 (59%), Gaps = 7/531 (1%)
Query: 128 LEHARQVFDEMPNKDTV-TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
+ +A +VF ++ V W ++I GYA+ ++ A L+ +M R P+ T L
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM-RVSGLVEPDTHTYPFL 127
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+K + G +H + GF ++V +SL+ +YA CG + A VFD++ K+
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KD 186
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
V+WN++I L+ +M +G FT +LL + + +G+L GK +
Sbjct: 187 LVAWNSVINGFAENGKPEEALA--LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H +M+K G + N LL +YA+ G + +A+ +FD +V + VS S+++G A +GFG
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 367 KEAVVLFKQM-LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYA 424
KEA+ LFK M +G+ P +ITF+ +L ACSH G++ EG YF+ MR+ + +EP++ H+
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 364
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDLL RAG + +A +I+ M ++P IW LLGA +H ++ +A ++ +L+P
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPN 424
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
+SG +VLL+N+YAS RW + IRK M G+KK P S VE+ N VH F+ D +HPQ
Sbjct: 425 HSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQ 484
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGS 604
D I +++ ++ GYVP +V + V++ EKE + YHSEK+A+AF L++T S
Sbjct: 485 SDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERS 544
Query: 605 TIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
I ++KN+RVC DCH A+K V+ + REI+VRD +RFHHF +G CSC DYW
Sbjct: 545 PITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 171/333 (51%), Gaps = 17/333 (5%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
G VEPD Y L+K T + +R G +HS ++ + +QNS+L +YA CGD+
Sbjct: 115 GLVEPDTHTYPFLIKAVTTMADVRLGETIHS--VVIRSGFGSLIYVQNSLLHLYANCGDV 172
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A +VFD+MP KD V W S+I G+A+N + +AL L+ +M G +P+ FT+ SL+
Sbjct: 173 ASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLS 230
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C I + G++VH K G N+ + L+D+YARCG + EA+ +FDE+ KN V
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSV 289
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
SW +LI LF M+ EG E T+ +L + S G +++G + +
Sbjct: 290 SWTSLI--VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG-FEY 346
Query: 308 GHMLKSGRKLVGYVGN--TLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHG 364
++ K+ + + ++ + A++G + A + + ++ +VV ++L HG
Sbjct: 347 FRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Query: 365 FGKEAVVLFKQMLRDGIEPN---DITFLSLLTA 394
A Q+L+ +EPN D LS + A
Sbjct: 407 DSDLAEFARIQILQ--LEPNHSGDYVLLSNMYA 437
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 333/580 (57%), Gaps = 15/580 (2%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ L C +GR++H L+ + + +I N+++ MY + G++ +R+V +
Sbjct: 348 FTSALAACFTPDFFEKGRILHG--LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 405
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP +D V W ++I GYA++E AL F M G S N T+ S++ C L+P G
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS--NYITVVSVLSAC-LLP--G 460
Query: 198 D----GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
D G+ +H GF + V +SL+ MYA+CG L +Q +F+ L +N ++WNA+
Sbjct: 461 DLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN-RNIITWNAM 519
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
+ L +KM+ G + +F++S L +A+ + LE+G+ LHG +K
Sbjct: 520 LAANAHHGHGEEVLK--LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 577
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
G + ++ N MY+K G I + K+ V + S N ++ +HG+ +E F
Sbjct: 578 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 637
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGR 432
+ML GI+P +TF+SLLTACSH GL+D+G Y+ ++ R FG+EP + H ++DLLGR
Sbjct: 638 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 697
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
+G L A +FI M ++P +W +LL + +H ++ G AA+ + +L+P +VL
Sbjct: 698 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757
Query: 493 ANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMW 552
+N++A+ GRW++ N+RK M +KK+ ACSWV++++ V F D HPQ +I
Sbjct: 758 SNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKL 817
Query: 553 EKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNI 612
E + + IKE GYV DT L D+ +KE NL HSE+LALA+AL++T GST+RI KN+
Sbjct: 818 EDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNL 877
Query: 613 RVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCG 652
R+C DCHS K+V+ ++ R I++RD RFHHF G G
Sbjct: 878 RICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 176/355 (49%), Gaps = 7/355 (1%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
L ++NS++ M G++++A +FD+M +DT++W S+ YAQN ++ +F M R
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 237
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
N T+S+L+ G + GR +HG K GF V V ++L+ MYA G
Sbjct: 238 --FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
EA VF ++ K+ +SWN+L+ L M G V T+++ L
Sbjct: 296 VEANLVFKQMPT-KDLISWNSLMASFVNDGRSLDALG--LLCSMISSGKSVNYVTFTSAL 352
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
+ + E+G+ LHG ++ SG +GN L+ MY K G +S++R+V ++ + DVV
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG-LLDEGERYFQL 410
+ N+++ GYA+ +A+ F+ M +G+ N IT +S+L+AC G LL+ G+
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 411 MRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G E ++ + + G L + G L W A+L A+ H
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG-LDNRNIITWNAMLAANAHH 526
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 9/393 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKL-REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
++P + L+ C + G + REG V H + + D+ + ++L +Y G +
Sbjct: 36 GIKPSSFVIASLVTACGRSGSMFREG--VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 93
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
+R+VF+EMP+++ V+WTS++ GY+ + + ++ M G G NE ++S ++
Sbjct: 94 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR--GEGVGCNENSMSLVIS 151
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
CGL+ GRQ+ G K G + V +SL+ M G + A +FD++ ++ +
Sbjct: 152 SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTI 210
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWN++ +F+ M+R V T S LL V + G+ +HG
Sbjct: 211 SWNSI--AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
++K G V V NTLL MYA +G +A VF ++ D++S NS++ + G +
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
A+ L M+ G N +TF S L AC ++G L+ G+ +V
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ G+ G + + + M A W AL+G
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVA-WNALIGG 420
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS-Y 196
MP ++ V+W +M++G + ++ + F M G +P+ F ++SLV CG S +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD--LGIKPSSFVIASLVTACGRSGSMF 58
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
+G QVHG K G +V+V ++++ +Y G + ++ VF+E+ +N VSW +L+
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVG 117
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
++ M+ EG G E + S ++ S + G+ + G ++KSG +
Sbjct: 118 YSDKGEPEEVID--IYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 175
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
V N+L+ M G++ A +FD++ + D +S NS+ YAQ+G +E+ +F M
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Query: 377 LRDGIEPNDITFLSLLTACSH 397
R E N T +LL+ H
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGH 256
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/564 (39%), Positives = 326/564 (57%), Gaps = 16/564 (2%)
Query: 94 GRLVHSHFLLQN-PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
R++ +H L P+ D N +L Y R + E A+ FD MP KD +W +MITG
Sbjct: 107 SRMMEAHQLFDEIPE--PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC 212
YA+ A LF M+ NE + ++++ G I + H +K
Sbjct: 165 YARRGEMEKARELFYSMME------KNEVSWNAMIS--GYIECGDLEKASH--FFKVAPV 214
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
V ++++ Y + + A+A+F ++ KN V+WNA+I LF
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLK--LF 272
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
M EG S+ L S + +L+ G+ +H + KS +L+ MY K
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKC 332
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
G + DA K+F+ + K DVV+ N+M+ GYAQHG +A+ LF++M+ + I P+ ITF+++L
Sbjct: 333 GELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Query: 393 TACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT 451
AC+HAGL++ G YF+ M R + VEP+ HY +VDLLGRAG L+ A+ I M P
Sbjct: 393 LACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPH 452
Query: 452 AAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKM 511
AA++G LLGA +HK +E+ +AA+K+ +L+ + +V LANIYAS RW++ A +RK
Sbjct: 453 AAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKR 512
Query: 512 MKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHV 571
MK+S + K P SW+EI N VH F S+D HP+ D I K ++L +++K GY P+
Sbjct: 513 MKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFA 572
Query: 572 LLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKR 631
L V++ +KE L +HSEKLA+AF + GS I++ KN+R+CGDCH A+K+++ I KR
Sbjct: 573 LHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKR 632
Query: 632 EIIVRDTNRFHHFCDGFCSCGDYW 655
EIIVRDT RFHHF DG CSCGDYW
Sbjct: 633 EIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 155/371 (41%), Gaps = 54/371 (14%)
Query: 96 LVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ 155
LV S +L + P +D + N ++ R GD++ A +VF M K+T+TW S++ G ++
Sbjct: 46 LVRSDYLTK-PSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISK 104
Query: 156 N-ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDN 214
+ R ++A LF ++ P+ F+ + ++ C
Sbjct: 105 DPSRMMEAHQLFDEI------PEPDTFSYNIMLSC------------------------- 133
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
Y R +AQ+ FD + +K+ SWN +I LF
Sbjct: 134 ----------YVRNVNFEKAQSFFDRMP-FKDAASWNTMI--TGYARRGEMEKARELFYS 180
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
M + E +++A++ G LE+ H + R +V + +M AK
Sbjct: 181 MMEK----NEVSWNAMISGYIECGDLEKAS--HFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
+++A D V ++V+ N+M+ GY ++ ++ + LF+ ML +GI PN S L
Sbjct: 235 LAEAM-FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLG 293
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI 454
CS L G + Q++ + + V+ ++ + + G L A E M + A
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA- 352
Query: 455 WGALLGASWMH 465
W A++ H
Sbjct: 353 WNAMISGYAQH 363
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R + GL + + + P+ + L C++L L+ GR +H ++ + +D+
Sbjct: 264 RPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ--IVSKSTLCNDVTA 321
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
S++ MY +CG+L A ++F+ M KD V W +MI+GYAQ+ A AL LF +M+ +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMI--DN 379
Query: 175 GSRPNEFTLSSLVKCCG 191
RP+ T +++ C
Sbjct: 380 KIRPDWITFVAVLLACN 396
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 355/615 (57%), Gaps = 13/615 (2%)
Query: 47 IDDRNLLRRSKTGLHVLDLID-RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
I+ L R + + ++++ R + + + Y L++ C +L +R + V+ F++ N
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYG-FMMSN 152
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
+ + N +L M+ +CG + AR++FDE+P ++ ++ S+I+G+ V+A L
Sbjct: 153 -GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
F M S + F + +++ + S G+Q+H C K G DN FV L+DMY
Sbjct: 212 FKMMWEELSDCETHTFAV--MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMY 269
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
++CG + +A+ F+ + K V+WN +I L M+ G + +F
Sbjct: 270 SKCGDIEDARCAFECMPE-KTTVAWNNVIAGYALHGYSEEALC--LLYDMRDSGVSIDQF 326
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
T S ++ ++ + LE K H ++++G + L+ Y+K G + AR VFD+L
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKL 386
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE 405
+ +++S N+++ GYA HG G +AV LF++M+ + PN +TFL++L+AC+++GL ++G
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 406 RYFQLMRQF-GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
F M + G++P+ HYA +++LLGR GLLD A++FI ++ T +W ALL A M
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
+ +E+G A+K++ + P G +V++ N+Y S G+ EAA + + ++ GL PAC+
Sbjct: 507 QENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACT 566
Query: 525 WVEIENSVHVFVSND----IAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEK 580
WVE+ + H F+S D K +I + ++L +EI E GY + +H+L VD+ E+
Sbjct: 567 WVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEE 626
Query: 581 ELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNR 640
E +YHSEKLA+A+ L+NT + ++I +N R+C +CH +++++L+ RE++VRD +R
Sbjct: 627 ERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASR 686
Query: 641 FHHFCDGFCSCGDYW 655
FHHF +G CSCG YW
Sbjct: 687 FHHFKEGKCSCGGYW 701
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 333/591 (56%), Gaps = 26/591 (4%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
+P ++Y LLK+ L GR +H+H + + + I+ ++ MY +CG L A
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVI--RAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
++VFD+M K V T ++ GY Q RA DAL LF D++ G + F S ++K C
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVT--EGVEWDSFVFSVVLKACA 296
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+ G+Q+H C K G V VG+ LVD Y +C A F E+ R N+VSW+
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWS 355
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGV-TEFTYSALLCSASSVGSLEQGKWLHGHM 310
A+I F ++ + + FTY+++ + S + G +H
Sbjct: 356 AIISGYCQMSQFEEAVKT--FKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 311 LKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+K R L+G Y + L+ MY+K G + DA +VF+ + D+V+ + + G+A +G E
Sbjct: 414 IK--RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASE 471
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIV 427
A+ LF++M+ G++PN +TF+++LTACSHAGL+++G+ M R++ V P + HY ++
Sbjct: 472 ALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMI 531
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
D+ R+GLLD A+ F++ M EP A W L W HK +E+G A +++ +LDP +
Sbjct: 532 DIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTA 591
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
+VL N+Y AG+W+EAA + K+M + LKKE +CSW++ + +H F+ D HPQ +
Sbjct: 592 GYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQE 651
Query: 548 IIKMWEKLNQEIKEI-GYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNT--SPGS 604
I +EKL KE G++ ++ E+ L+ HSE+LA+AF L++ + +
Sbjct: 652 I---YEKL----KEFDGFMEGDMFQCNMTERREQLLD---HSERLAIAFGLISVHGNAPA 701
Query: 605 TIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
I++ KN+R C DCH K+V+L+ EI++RD+ RFHHF +G CSC DYW
Sbjct: 702 PIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 189/411 (45%), Gaps = 15/411 (3%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLL--QNPDVRDD 111
R+ L +D+ V YQ L + C +L L GRL+H + +NP V
Sbjct: 62 RKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV--- 118
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
++QN VL MY C LE A ++FDEM + V+ T+MI+ YA+ A+ LF ML
Sbjct: 119 -LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML- 176
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
SG +P ++L+K + GRQ+H + G C N + + +V+MY +CG+L
Sbjct: 177 -ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWL 235
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
A+ VFD++ K V+ L+ LF + EG F +S +L
Sbjct: 236 VGAKRVFDQMAV-KKPVACTGLM--VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
+ +S+ L GK +H + K G + VG L+ Y K S A + F + + + V
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITFLSLLTACS-HAGLLDEGERYFQ 409
S ++++ GY Q +EAV FK + ++ N T+ S+ ACS A G+ +
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
+++ + + A ++ + + G LD A E M P W A +
Sbjct: 413 AIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESM-DNPDIVAWTAFIS 461
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/587 (34%), Positives = 339/587 (57%), Gaps = 11/587 (1%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
+PD +L+ C L L + ++ +++L+ V + V +N ++ +YA+CGD+ A
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIY-NYMLKAGFVLESTV-RNILIDVYAKCGDMITA 361
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
R VF+ M KDTV+W S+I+GY Q+ ++A+ LF M+ + + T L+
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI--MEEQADHITYLMLISVST 419
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+ G+ +H K G C ++ V ++L+DMYA+CG +G++ +F +G + V+WN
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWN 478
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
+I + +M++ T+ L +S+ + GK +H +L
Sbjct: 479 TVISACVRFGDFATGLQ--VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL 536
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
+ G + +GN L+ MY+K G + ++ +VF+R+ + DVV+ M+ Y +G G++A+
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLL 430
F M + GI P+ + F++++ ACSH+GL+DEG F+ M+ + ++P + HYA +VDLL
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHV 490
R+ + +A FI+ M I+P A+IW ++L A +E ++++ EL+P G +
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 491 LLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIK 550
L +N YA+ +W + + IRK +KD + K P SW+E+ +VHVF S D + PQ + I K
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 551 MWEKLNQEIKEIGYVPDTRHVL--LFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRI 608
E L + + GY+PD R V L ++ ++ L + HSE+LA+AF LLNT PG+ +++
Sbjct: 777 SLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRL-ICGHSERLAIAFGLLNTEPGTPLQV 835
Query: 609 MKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
MKN+RVCGDCH K ++ IV REI+VRD NRFH F DG CSC D W
Sbjct: 836 MKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 191/391 (48%), Gaps = 9/391 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V PD+ + ++K C L G LV+ L + DL + N+++ MY+R G L
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL--DMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
ARQVFDEMP +D V+W S+I+GY+ + +AL ++ ++ S P+ FT+SS++
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVSSVLPAF 217
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
G + G+ +HG K G V V + LV MY + +A+ VFDE+ ++ VS+
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD-VRDSVSY 276
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N +I L + + T S++L + + L K+++ +M
Sbjct: 277 NTMICGYLKLEMVEESVRMFL---ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
LK+G L V N L+ +YAK G + AR VF+ + D VS NS++ GY Q G EA+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
LFK M+ + + IT+L L++ + L G+ + G+ +S ++D+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ G + ++ M T W ++ A
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTVT-WNTVISA 483
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 13/384 (3%)
Query: 79 QRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
R L + + L +LR +H+ + D D ++ Y+ + + VF +
Sbjct: 11 SRALSSSSNLNELRR---IHALVISLGLDSSD--FFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 139 -PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
P K+ W S+I +++N +AL + + S P+++T S++K C +
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRE--SKVSPDKYTFPSVIKACAGLFDAE 123
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G V+ GF ++FVG++LVDMY+R G L A+ VFDE+ ++ VSWN+LI
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP-VRDLVSWNSLISGY 182
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
++ +++ FT S++L + ++ ++QG+ LHG LKSG
Sbjct: 183 SSHGYYEEALE--IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
V V N L+ MY K +DAR+VFD + D VS N+M+ GY + +E+V +F + L
Sbjct: 241 VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL 300
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLD 437
D +P+ +T S+L AC H L + + M + G + + ++D+ + G +
Sbjct: 301 -DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMI 359
Query: 438 RAMSFIEGMLIEPTAAIWGALLGA 461
A M + T + W +++
Sbjct: 360 TARDVFNSMECKDTVS-WNSIISG 382
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
TGL V + + V PD A + L C L R G+ +H L +L I N+
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL--RFGYESELQIGNA 549
Query: 118 VLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
++ MY++CG LE++ +VF+ M +D VTWT MI Y AL F DM + SG
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK--SGIV 607
Query: 178 PNEFTLSSLVKCCG 191
P+ +++ C
Sbjct: 608 PDSVVFIAIIYACS 621
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/508 (40%), Positives = 296/508 (58%), Gaps = 46/508 (9%)
Query: 192 LIPSYGD------GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-- 243
L+PS+ + G++ H G + FV +SL++MY+ CG L AQ VFD+ G
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 244 ---W-------------------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
W +N +SW+ LI LF +M
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD--LFREM 185
Query: 276 Q----REGY-GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
Q E + EFT S +L + +G+LEQGKW+H ++ K ++ +G L+ MYA
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 331 KSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITF 388
K GS+ A++VF+ L K DV + ++M+ A +G E LF +M D I PN +TF
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 389 LSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML 447
+ +L AC H GL++EG+ YF++M +FG+ P + HY +VDL GR+GL+ A SFI M
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 448 IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAAN 507
+EP IWG+LL S M I+ A +++ ELDP SGA+VLL+N+YA GRW E
Sbjct: 366 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKC 425
Query: 508 IRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPD 567
IR M+ G+ K P CS+VE+E VH FV D + + ++I M +++ Q ++E GYV D
Sbjct: 426 IRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTD 485
Query: 568 TRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTL 627
T+ VLL +++ +KE+ L YHSEKLA+AF L+ T PG+ +RI+KN+R+CGDCH MK ++
Sbjct: 486 TKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISK 545
Query: 628 IVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+ REI+VRD NRFHHF DG CSC D+W
Sbjct: 546 LFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 24/361 (6%)
Query: 8 ITTRVKLVQRHS--VTLRRLWQTAISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDL 65
I V QRHS R+ +S D P L S++ L +R+ + + L
Sbjct: 34 IVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGL 93
Query: 66 IDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
+ D + LL + G LR + V + DL NSV+ YA+
Sbjct: 94 ------DKDPFVRTSLLNMYSSCGDLRSAQRVF------DDSGSKDLPAWNSVVNAYAKA 141
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS---RPNEFT 182
G ++ AR++FDEMP ++ ++W+ +I GY + +AL LF +M RPNEFT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+S+++ CG + + G+ VH K+ ++ +G++L+DMYA+CG L A+ VF+ LG
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM-QREGYGVTEFTYSALLCSASSVGSLE 301
K+ +++A+I LF++M + T+ +L + G +
Sbjct: 262 SKKDVKAYSAMI--CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLIN 319
Query: 302 QGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLI 358
+GK M++ + + G ++ +Y +SG I +A + ++ DV+ S+L
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYG-CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 359 G 359
G
Sbjct: 379 G 379
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 328/591 (55%), Gaps = 16/591 (2%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R PD + +LK+C L G+ +H H + + + +++ MY +CG
Sbjct: 46 RSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH--VTKGGCETEPFVLTALISMYCKCGL 103
Query: 128 LEHARQVFDEMPNKD--TVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
+ AR+VF+E P +V + ++I+GY N + DA +F M +G + T+
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE--TGVSVDSVTMLG 161
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
LV C + GR +HG C K G V V +S + MY +CG + + +FDE+ K
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM-PVK 220
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
++WNA+I L+ +M+ G FT ++L S + +G+ + G
Sbjct: 221 GLITWNAVISGYSQNGLAYDVLE--LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+ + +G +V N + MYA+ G+++ AR VFD + +VS +M+ Y HG
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYA 424
G+ ++LF M++ GI P+ F+ +L+ACSH+GL D+G F+ M R++ +EP HY+
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDLLGRAG LD AM FIE M +EP A+WGALLGA +HK ++M A KV E +P
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN 458
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
G +VL++NIY+ + + IR MM++ +K+P S+VE + VH+F++ D +H Q
Sbjct: 459 NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQ 518
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGS 604
+++ +M ++L + E+ D E + HSE+LA+AF +LN+ PG+
Sbjct: 519 TEEVHRMLDELETSVMELAGNMDCDR------GEEVSSTTREHSERLAIAFGILNSIPGT 572
Query: 605 TIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
I ++KN+RVC DCH +K V+ IV R+ +VRD +RFH+F DG CSC DYW
Sbjct: 573 EILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 3/191 (1%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L+ M R G F++ +L S +S+ G+ LH H+ K G + +V L+ MY
Sbjct: 40 LYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 331 KSGSISDARKVFDRLVKVDVVSC--NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
K G ++DARKVF+ + +S N+++ GY + +A +F++M G+ + +T
Sbjct: 100 KCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTM 159
Query: 389 LSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
L L+ C+ L G + G++ +V+ + + + G ++ + M +
Sbjct: 160 LGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 449 EPTAAIWGALL 459
+ W A++
Sbjct: 220 KGLIT-WNAVI 229
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 339/617 (54%), Gaps = 38/617 (6%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V P+ ++ C KL L G V++ ++N + + ++ ++++ MY +C ++
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYA--FIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A+++FDE + +M + Y + +AL +F M+ SG RP+ ++ S + C
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSC 347
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR------- 243
+ + G+ HG ++GF + ++L+DMY +C A +FD +
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWN 407
Query: 244 ---------------W--------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ-REG 279
W KN VSWN +I +F MQ +EG
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE--VFCSMQSQEG 465
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR 339
T ++ + +G+L+ KW++ ++ K+G +L +G TL+ M+++ G A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
+F+ L DV + + + A G + A+ LF M+ G++P+ + F+ LTACSH G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 400 LLDEG-ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
L+ +G E ++ +++ GV P+ HY +VDLLGRAGLL+ A+ IE M +EP IW +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 459 LGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
L A + +EM AYAA+K+ L P +G++VLL+N+YASAGRW + A +R MK+ GL+
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 519 KEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQH 578
K P S ++I H F S D +HP+ I M ++++Q +G+VPD +VL+ VD+
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEK 765
Query: 579 EKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDT 638
EK L HSEKLA+A+ L++++ G+TIRI+KN+RVC DCHS K+ + + REII+RD
Sbjct: 766 EKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDN 825
Query: 639 NRFHHFCDGFCSCGDYW 655
NRFH+ G CSCGD+W
Sbjct: 826 NRFHYIRQGKCSCGDFW 842
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 39/419 (9%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L L +++ G + PD+ + L C K +G + H L+ DL +QNS++
Sbjct: 120 LLFLRMMNSG-ISPDKYTFPFGLSACAK--SRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
YA CG+L+ AR+VFDEM ++ V+WTSMI GYA+ + A DA+ LF M+R + PN
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVT-PN 235
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
T+ ++ C + G +V+ G N + S+LVDMY +C + A+ +FD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
E G ++ NA+ +F M G + + + S S + +
Sbjct: 296 EYGASNLDLC-NAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
+ GK HG++L++G + + N L+ MY K A ++FDR+ VV+ NS++ G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 360 YAQHG-------------------------------FGKEAVVLFKQML-RDGIEPNDIT 387
Y ++G +EA+ +F M ++G+ + +T
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 388 FLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+S+ +AC H G LD + + + + G++ V +VD+ R G + AMS +
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 173/358 (48%), Gaps = 12/358 (3%)
Query: 128 LEHARQVFDEMPNKDTV-TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
L A++VF+ + T + S+I GYA + +A++LF M+ SG P+++T
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM--NSGISPDKYTFPFG 140
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ C + G+G Q+HG K G+ ++FV +SLV YA CG L A+ VFDE+ +N
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-RN 199
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKW 305
VSW ++I LF +M R E T ++ + + + LE G+
Sbjct: 200 VVSWTSMI--CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
++ + SG ++ + + L+ MY K +I A+++FD ++ CN+M Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAK 425
+EA+ +F M+ G+ P+ I+ LS +++CS + G+ + + G E +
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
++D+ + D A + M T W +++ + +++ AA + FE P
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYVENGEVD----AAWETFETMP 430
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 22/293 (7%)
Query: 161 DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS-------YGDGRQVHGCCWKHGFCD 213
+ L L P +L + ++P+ S KC PS + + H K G +
Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQS---KCTKATPSSLKNCKTIDELKMFHRSLTKQGLDN 62
Query: 214 NVFVGSSLVDMYARCGFLGE------AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXX 267
+V S++ + AR LG A+ VF+ + +N+LI
Sbjct: 63 DV---STITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 268 XXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLH 327
LF +M G ++T+ L + + + G +HG ++K G +V N+L+H
Sbjct: 120 L--LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 328 MYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDI 386
YA+ G + ARKVFD + + +VVS SM+ GYA+ F K+AV LF +M+RD + PN +
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
T + +++AC+ L+ GE+ + +R G+E + +VD+ + +D A
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 151/375 (40%), Gaps = 70/375 (18%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
++ L V +L+ V PDR + +C++L + G+ H + L + D+ I
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--IC 375
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM------ 169
N+++ MY +C + A ++FD M NK VTW S++ GY +N A F M
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 170 ------------------------LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
++ G + T+ S+ CG + + + ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K+G +V +G++LVDM++RCG A ++F+ L ++ +W A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTA--AIGAMAMAGNA 552
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
LF M +G + L + S G ++QGK + MLK
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK------------- 599
Query: 326 LHMYAKSGSISDARKVFDRLVKVDV-VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
LH + DV C L+G A G +EAV L + M +EPN
Sbjct: 600 LHGVSPE----------------DVHYGCMVDLLGRA--GLLEEAVQLIEDM---PMEPN 638
Query: 385 DITFLSLLTACSHAG 399
D+ + SLL AC G
Sbjct: 639 DVIWNSLLAACRVQG 653
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/559 (34%), Positives = 313/559 (55%), Gaps = 33/559 (5%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
L++A Q+ D SMI + ++ + + +L G+ +P+ +T++ LV
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG----- 242
+ C + G QVHG + GF ++ V + L+ +YA G L VF+ +
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 243 -------------------------RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQR 277
++ ++WNA+I +F MQ
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALN--VFHLMQL 233
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
EG V ++L + + +G+L+QG+W H ++ ++ K+ + TL+ +YAK G +
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEK 293
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
A +VF + + +V + +S L G A +GFG++ + LF M +DG+ PN +TF+S+L CS
Sbjct: 294 AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSV 353
Query: 398 AGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWG 456
G +DEG+R+F MR +FG+EP++ HY +VDL RAG L+ A+S I+ M ++P AA+W
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 457 ALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
+LL AS M+K +E+G A++K+ EL+ GA+VLL+NIYA + W +++R+ MK G
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKG 473
Query: 517 LKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVD 576
++K+P CS +E+ VH F D +HP+ +I +W+ +++ ++ GY DT V+ +D
Sbjct: 474 VRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Query: 577 QHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVR 636
+ EKE L HSEK A+AF +++ IRI+KN+RVCGDCH ++ I REIIVR
Sbjct: 534 EEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVR 593
Query: 637 DTNRFHHFCDGFCSCGDYW 655
D NRFHHF DG CSC +W
Sbjct: 594 DRNRFHHFKDGHCSCNGFW 612
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 150/326 (46%), Gaps = 20/326 (6%)
Query: 25 LWQTAISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKT 84
++ +S ND P+ +++ LR +TGL V + R + D + L+
Sbjct: 93 FYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISL 152
Query: 85 CTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTV 144
+LG L H F N D V + +++ ARCGD+ AR++F+ MP +D +
Sbjct: 153 YAELGCLDS---CHKVF---NSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 145 TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHG 204
W +MI+GYAQ + +AL +F L G + N + S++ C + + GR H
Sbjct: 207 AWNAMISGYAQVGESREALNVF--HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHS 264
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXX 264
++ V + ++LVD+YA+CG + +A VF + KN +W++ +
Sbjct: 265 YIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSAL--NGLAMNGF 321
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN- 323
LF+ M+++G T+ ++L S VG +++G+ S R G
Sbjct: 322 GEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ----RHFDSMRNEFGIEPQL 377
Query: 324 ----TLLHMYAKSGSISDARKVFDRL 345
L+ +YA++G + DA + ++
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQM 403
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 338/616 (54%), Gaps = 38/616 (6%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V P+ ++ C KL L G V++ ++N + + ++ ++++ MY +C ++
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYA--FIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A+++FDE + +M + Y + +AL +F M+ SG RP+ ++ S + C
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM--DSGVRPDRISMLSAISSC 347
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR------- 243
+ + G+ HG ++GF + ++L+DMY +C A +FD +
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWN 407
Query: 244 ---------------W--------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ-REG 279
W KN VSWN +I +F MQ +EG
Sbjct: 408 SIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE--VFCSMQSQEG 465
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR 339
T ++ + +G+L+ KW++ ++ K+G +L +G TL+ M+++ G A
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
+F+ L DV + + + A G + A+ LF M+ G++P+ + F+ LTACSH G
Sbjct: 526 SIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGG 585
Query: 400 LLDEG-ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
L+ +G E ++ +++ GV P+ HY +VDLLGRAGLL+ A+ IE M +EP IW +L
Sbjct: 586 LVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Query: 459 LGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
L A + +EM AYAA+K+ L P +G++VLL+N+YASAGRW + A +R MK+ GL+
Sbjct: 646 LAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLR 705
Query: 519 KEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQH 578
K P S ++I H F S D +HP+ I M ++++Q +G+VPD +VL+ VD+
Sbjct: 706 KPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEK 765
Query: 579 EKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDT 638
EK L HSEKLA+A+ L++++ G+TIRI+KN+RVC DCHS K+ + + REII+RD
Sbjct: 766 EKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDN 825
Query: 639 NRFHHFCDGFCSCGDY 654
NRFH+ G CSCGD+
Sbjct: 826 NRFHYIRQGKCSCGDF 841
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 39/419 (9%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L L +++ G + PD+ + L C K +G + H L+ DL +QNS++
Sbjct: 120 LLFLRMMNSG-ISPDKYTFPFGLSACAK--SRAKGNGIQIHGLIVKMGYAKDLFVQNSLV 176
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
YA CG+L+ AR+VFDEM ++ V+WTSMI GYA+ + A DA+ LF M+R + PN
Sbjct: 177 HFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVT-PN 235
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
T+ ++ C + G +V+ G N + S+LVDMY +C + A+ +FD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
E G ++ NA+ +F M G + + + S S + +
Sbjct: 296 EYGASNLDLC-NAM--ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
+ GK HG++L++G + + N L+ MY K A ++FDR+ VV+ NS++ G
Sbjct: 353 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 412
Query: 360 YAQHG-------------------------------FGKEAVVLFKQML-RDGIEPNDIT 387
Y ++G +EA+ +F M ++G+ + +T
Sbjct: 413 YVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVT 472
Query: 388 FLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+S+ +AC H G LD + + + + G++ V +VD+ R G + AMS +
Sbjct: 473 MMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 173/358 (48%), Gaps = 12/358 (3%)
Query: 128 LEHARQVFDEMPNKDTV-TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
L A++VF+ + T + S+I GYA + +A++LF M+ SG P+++T
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMM--NSGISPDKYTFPFG 140
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ C + G+G Q+HG K G+ ++FV +SLV YA CG L A+ VFDE+ +N
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-RN 199
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKW 305
VSW ++I LF +M R E T ++ + + + LE G+
Sbjct: 200 VVSWTSMI--CGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
++ + SG ++ + + L+ MY K +I A+++FD ++ CN+M Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAK 425
+EA+ +F M+ G+ P+ I+ LS +++CS + G+ + + G E +
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
++D+ + D A + M T W +++ + +++ AA + FE P
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYVENGEVD----AAWETFETMP 430
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 139/293 (47%), Gaps = 22/293 (7%)
Query: 161 DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS-------YGDGRQVHGCCWKHGFCD 213
+ L L P +L + ++P+ S KC PS + + H K G +
Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQS---KCTKATPSSLKNCKTIDELKMFHRSLTKQGLDN 62
Query: 214 NVFVGSSLVDMYARCGFLGE------AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXX 267
+V S++ + AR LG A+ VF+ + +N+LI
Sbjct: 63 DV---STITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAI 119
Query: 268 XXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLH 327
LF +M G ++T+ L + + + G +HG ++K G +V N+L+H
Sbjct: 120 L--LFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVH 177
Query: 328 MYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDI 386
YA+ G + ARKVFD + + +VVS SM+ GYA+ F K+AV LF +M+RD + PN +
Sbjct: 178 FYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSV 237
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
T + +++AC+ L+ GE+ + +R G+E + +VD+ + +D A
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 151/375 (40%), Gaps = 70/375 (18%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
++ L V +L+ V PDR + +C++L + G+ H + L + D+ I
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN--IC 375
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM------ 169
N+++ MY +C + A ++FD M NK VTW S++ GY +N A F M
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 170 ------------------------LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
++ G + T+ S+ CG + + + ++
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K+G +V +G++LVDM++RCG A ++F+ L ++ +W A
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN-RDVSAWTA--AIGAMAMAGNA 552
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
LF M +G + L + S G ++QGK + MLK
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK------------- 599
Query: 326 LHMYAKSGSISDARKVFDRLVKVDV-VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
LH + DV C L+G A G +EAV L + M +EPN
Sbjct: 600 LHGVSPE----------------DVHYGCMVDLLGRA--GLLEEAVQLIEDM---PMEPN 638
Query: 385 DITFLSLLTACSHAG 399
D+ + SLL AC G
Sbjct: 639 DVIWNSLLAACRVQG 653
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 334/586 (56%), Gaps = 11/586 (1%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
+PDR L C+ + + G+ +H H + + D+++ S+L MY++ G++ +A
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET-GDVMVMTSILDMYSKYGEVSYA 286
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
++F+ M ++ V W MI YA+N R DA + F M +G +P+ T +L+
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ-NGLQPDVITSINLLPASA 345
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
++ +GR +HG + GF ++ + ++L+DMY CG L A+ +FD + KN +SWN
Sbjct: 346 IL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE-KNVISWN 400
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
++I LF ++ T +++L + + SL +G+ +H +++
Sbjct: 401 SIIAAYVQNGKNYSALE--LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIV 458
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
KS + N+L+HMYA G + DARK F+ ++ DVVS NS+++ YA HGFG+ +V
Sbjct: 459 KSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVW 518
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLL 430
LF +M+ + PN TF SLL ACS +G++DEG YF+ M R++G++P + HY ++DL+
Sbjct: 519 LFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLI 578
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHV 490
GR G A F+E M PTA IWG+LL AS HK I + +AA+++F+++ +G +V
Sbjct: 579 GRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV 638
Query: 491 LLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIK 550
LL N+YA AGRW++ I+ +M+ G+ + + S VE + HVF + D +H +KI +
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYE 698
Query: 551 MWEKLNQEI-KEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIM 609
+ + +++ + +E YV + + + + HS +LA F L++T G + +
Sbjct: 699 VLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVR 758
Query: 610 KNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
N R+C CH ++ + + +REI+V D+ FHHF +G CSCG+YW
Sbjct: 759 NNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 204/428 (47%), Gaps = 14/428 (3%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
V+ D Y ++K+ + L EG+ +H+ ++ D+ + NS++ +Y + G
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHA--MVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A +VF+EMP +D V+W SMI+GY +L+LF +ML+ G +P+ F+ S +
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK--CGFKPDRFSTMSALG 239
Query: 189 CCGLIPSYGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
C + S G+++H + +V V +S++DMY++ G + A+ +F+ + + +N
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQ-RNI 298
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
V+WN +I F KM + + S L AS++ +G+ +H
Sbjct: 299 VAWNVMI--GCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI---LEGRTIH 353
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G+ ++ G + L+ MY + G + A +FDR+ + +V+S NS++ Y Q+G
Sbjct: 354 GYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
A+ LF+++ + P+ T S+L A + + L EG + + +V
Sbjct: 414 SALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLV 473
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH--KKIEMGAYAAQKVFELDPFY 485
+ G L+ A +L++ + W +++ A +H +I + ++ ++P
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVS-WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 486 SGAHVLLA 493
S LLA
Sbjct: 533 STFASLLA 540
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 182/356 (51%), Gaps = 18/356 (5%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+E A Q+FDEM D W MI G+ ++A+ + M+ +G + + FT ++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV--FAGVKADTFTYPFVI 137
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
K I S +G+++H K GF +V+V +SL+ +Y + G +A+ VF+E+ ++
Sbjct: 138 KSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE-RDI 196
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
VSWN++I LF +M + G+ F+ + L + S V S + GK +H
Sbjct: 197 VSWNSMI--SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 308 GHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
H ++S R G V ++L MY+K G +S A ++F+ +++ ++V+ N M+ YA++G
Sbjct: 255 CHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 366 GKEAVVLFKQML-RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
+A + F++M ++G++P+ IT ++LL A + + EG + G P +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLET 369
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE 480
++D+ G G L A + M E W +++ A + K Y+A ++F+
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRM-AEKNVISWNSIIAAYVQNGK----NYSALELFQ 420
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 5/257 (1%)
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
+A + +A +FDE+ + + WN +I +++M G
Sbjct: 74 FADSRLMEDALQLFDEMNK-ADAFLWNVMIKGFTSCGLYIEAVQ--FYSRMVFAGVKADT 130
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
FTY ++ S + + SLE+GK +H ++K G YV N+L+ +Y K G DA KVF+
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
+ + D+VS NSM+ GY G G +++LFK+ML+ G +P+ + +S L ACSH G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 405 -ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASW 463
E + +R V I+D+ + G + A GM I+ W ++G
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYA 309
Query: 464 MHKKIEMGAYAAQKVFE 480
+ ++ QK+ E
Sbjct: 310 RNGRVTDAFLCFQKMSE 326
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 328/585 (56%), Gaps = 22/585 (3%)
Query: 80 RLLKTCTKLGKLREGRLVHSHFLL----QNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
R+L+ C + KLR+ +HSH ++ +P + + L+ +V + G L HA+ +F
Sbjct: 10 RMLQGCNSMKKLRK---IHSHVIINGLQHHPSIFNHLLRFCAV----SVTGSLSHAQLLF 62
Query: 136 DEM-PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
D + T W +I G++ + +++++ + ML S SRP+ FT + +K C I
Sbjct: 63 DHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLS-SVSRPDLFTFNFALKSCERIK 121
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
S ++HG + GF D+ V +SLV Y+ G + A VFDE+ ++ VSWN +I
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP-VRDLVSWNVMI 180
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
++ +M EG +T ALL S + V +L G LH
Sbjct: 181 CCFSHVGLHNQALS--MYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
+ +V N L+ MYAK GS+ +A VF+ + K DV++ NSM+IGY HG G EA+ F+
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRA 433
+M+ G+ PN ITFL LL CSH GL+ EG +F++M QF + P V HY +VDL GRA
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 434 GLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLA 493
G L+ ++ I +W LLG+ +H+ +E+G A +K+ +L+ F +G +VL+
Sbjct: 359 GQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMT 418
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKII-KMW 552
+IY++A + A++RK+++ L+ P SW+EI + VH FV +D HP+ I ++
Sbjct: 419 SIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELG 478
Query: 553 EKLNQEIKEIGYVPD--TRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMK 610
E +N+ I GY P+ R D+ + HSEKLA+A+ L+ T+ G+T+RI K
Sbjct: 479 EVINRAILA-GYKPEDSNRTAPTLSDRCLGSADTS-HSEKLAIAYGLMRTTAGTTLRITK 536
Query: 611 NIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
N+RVC DCHS KYV+ REIIVRD RFHHF DG CSC DYW
Sbjct: 537 NLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/566 (36%), Positives = 321/566 (56%), Gaps = 11/566 (1%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERA 159
H L D N ++ Y + ++ AR++FDEM + V+WTS+I+GY +
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 160 VDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGS 219
+AL +F M PNE+T +S+ K C + G+ +H G N+ V S
Sbjct: 112 QNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 220 SLVDMYARCGFLGEAQAVFDEL-GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
SLVDMY +C + A+ VFD + G +N VSW ++I
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
+F ++++ + SS+G L+ GK HG + + G + V +LL MYAK GS+S A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 339 RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
K+F R+ V+S SM++ A+HG G+ AV LF +M+ I PN +T L +L ACSH+
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 399 GLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI--EPTAAIW 455
GL++EG Y LM ++GV P HY +VD+LGR G +D A + + + E A +W
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 456 GALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDS 515
GALL A +H ++E+ + A++++ + + + A++ L+N YA +G W+++ ++R MK S
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 516 GLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGY------VPDTR 569
G KE ACSW+E ++SV+VF + D++ + +I + + L + +KE G+ + +
Sbjct: 471 GNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSS 530
Query: 570 HVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIV 629
V + VD+ K+ + H E+LALA+ LL+ GSTIRIM N+R+C DCH A K ++ IV
Sbjct: 531 SVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIV 590
Query: 630 KREIIVRDTNRFHHFCDGFCSCGDYW 655
+REI+VRD NRFH F +G C+C DYW
Sbjct: 591 EREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 108/186 (58%), Gaps = 5/186 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V P+ + + K C+ L + R G+ +H+ L+ +R ++V+ +S++ MY +C D+E
Sbjct: 127 VPPNEYTFASVFKACSALAESRIGKNIHAR--LEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 131 ARQVFDEMP--NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
AR+VFD M ++ V+WTSMIT YAQN R +A+ LF + R N+F L+S++
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVIS 244
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C + G+ HG + G+ N V +SL+DMYA+CG L A+ +F + R + +
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRI-RCHSVI 303
Query: 249 SWNALI 254
S+ ++I
Sbjct: 304 SYTSMI 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 8/243 (3%)
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX 261
+H K GF + F + LV Y + + A+ +FDE+ N VSW ++I
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCE-PNVVSWTSVI--SGYND 107
Query: 262 XXXXXXXXXLFAKMQRE-GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
+F KM + E+T++++ + S++ GK +H + SG +
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV 167
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKV--DVVSCNSMLIGYAQHGFGKEAVVLFKQM-- 376
V ++L+ MY K + AR+VFD ++ +VVS SM+ YAQ+ G EA+ LF+
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL 436
N S+++ACS G L G+ L+ + G E ++D+ + G L
Sbjct: 228 ALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSL 287
Query: 437 DRA 439
A
Sbjct: 288 SCA 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 10/192 (5%)
Query: 69 GAVEPDRA---LYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
A+ DRA + ++ C+ LG+L+ G++ H L+ + V+ S+L MYA+C
Sbjct: 227 AALTSDRANQFMLASVISACSSLGRLQWGKVAHG--LVTRGGYESNTVVATSLLDMYAKC 284
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
G L A ++F + +++TSMI A++ A+ LF +M+ G PN TL
Sbjct: 285 GSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRIN--PNYVTLLG 342
Query: 186 LVKCCGLIPSYGDGRQ-VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD--ELG 242
++ C +G + + K+G + + +VDM R G + EA + E+G
Sbjct: 343 VLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVG 402
Query: 243 RWKNEVSWNALI 254
+ + W AL+
Sbjct: 403 AEQGALLWGALL 414
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
LH LK G + N L+ Y K I+ ARK+FD + + +VVS S++ GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 366 GKEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
+ A+ +F++M D + PN+ TF S+ ACS G+ + G+ + +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 425 KIVDLLGRAGLLDRAMSFIEGML 447
+VD+ G+ ++ A + M+
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMI 193
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/581 (35%), Positives = 335/581 (57%), Gaps = 16/581 (2%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCG---DLEHARQVFDE 137
LLK C + + ++ VH+ F+ + +SVL A G + +A +F
Sbjct: 36 LLKRCHNIDEFKQ---VHARFI-KLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRG 91
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
+ + T + +MI GY +AL + +M++ G+ P+ FT L+K C + S
Sbjct: 92 IDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ--RGNEPDNFTYPCLLKACTRLKSIR 149
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
+G+Q+HG +K G +VFV +SL++MY RCG + + AVF++L K SW++++
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL-ESKTAASWSSMVSAR 208
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFT--YSALLCSASSVGSLEQGKWLHGHMLKSGR 315
LF M E E + SALL A++ G+L G +HG +L++
Sbjct: 209 AGMGMWSECLL--LFRGMCSETNLKAEESGMVSALLACANT-GALNLGMSIHGFLLRNIS 265
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
+L V +L+ MY K G + A +F ++ K + ++ ++M+ G A HG G+ A+ +F +
Sbjct: 266 ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSK 325
Query: 376 MLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAG 434
M+++G+EP+ + ++S+L ACSH+GL+ EG R F +++++ VEP HY +VDLLGRAG
Sbjct: 326 MIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAG 385
Query: 435 LLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLAN 494
LL+ A+ I+ + IE IW L + + IE+G AAQ++ +L G ++L++N
Sbjct: 386 LLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISN 445
Query: 495 IYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEK 554
+Y+ W + A R + GLK+ P S VE++ H FVS D +HP+ +I KM +
Sbjct: 446 LYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQ 505
Query: 555 LNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRV 614
+ ++K GY PD +LL VD+ EK+ L+ HS+K+A+AF LL T PGS I+I +N+R+
Sbjct: 506 MEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRM 565
Query: 615 CGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
C DCH+ K +++I +REI+VRD NRFH F G CSC DYW
Sbjct: 566 CSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 132/252 (52%), Gaps = 7/252 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
+++ RG EPD Y LLK CT+L +REG+ +H + D+ +QNS++ MY
Sbjct: 122 EMMQRGN-EPDNFTYPCLLKACTRLKSIREGKQIHGQVF--KLGLEADVFVQNSLINMYG 178
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
RCG++E + VF+++ +K +W+SM++ A + L+LF M + + E +
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMC-SETNLKAEESGM 237
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
S + C + G +HG ++ N+ V +SLVDMY +CG L +A +F ++ +
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+N ++++A+I +F+KM +EG Y ++L + S G +++G
Sbjct: 298 -RNNLTYSAMI--SGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 304 KWLHGHMLKSGR 315
+ + MLK G+
Sbjct: 355 RRVFAEMLKEGK 366
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 339/620 (54%), Gaps = 45/620 (7%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D+ + +LK +K+ L EG +H + D ++ + MYA CG + +AR
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHG--VAFKIATLCDPFVETGFMDMYASCGRINYARN 167
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
VFDEM ++D VTW +MI Y + +A LF +M S P+E L ++V CG
Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM--KDSNVMPDEMILCNIVSACGRT 225
Query: 194 PSYGDGRQVH-------------------------GCC------WKHGFCDNVFVGSSLV 222
+ R ++ GC ++ N+FV +++V
Sbjct: 226 GNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMV 285
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
Y++CG L +AQ +FD+ + K+ V W +I +F +M G
Sbjct: 286 SGYSKCGRLDDAQVIFDQTEK-KDLVCWTTMISAYVESDYPQEALR--VFEEMCCSGIKP 342
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
+ +++ + +++G L++ KW+H + +G + + N L++MYAK G + R VF
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+++ + +VVS +SM+ + HG +A+ LF +M ++ +EPN++TF+ +L CSH+GL++
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 403 EGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
EG++ F M ++ + PK+ HY +VDL GRA LL A+ IE M + IWG+L+ A
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 462 SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEP 521
+H ++E+G +AA+++ EL+P + GA VL++NIYA RW++ NIR++M++ + KE
Sbjct: 523 CRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEK 582
Query: 522 ACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKE 581
S ++ H F+ D H Q ++I +++ ++K GYVPD VL+ V++ EK+
Sbjct: 583 GLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKK 642
Query: 582 LNLQYHSEKLALAFALLNTSPGS------TIRIMKNIRVCGDCHSAMKYVTLIVKREIIV 635
+ +HSEKLAL F L+N IRI+KN+RVC DCH K V+ + +REIIV
Sbjct: 643 DLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIV 702
Query: 636 RDTNRFHHFCDGFCSCGDYW 655
RD RFH + +G CSC DYW
Sbjct: 703 RDRTRFHCYKNGLCSCRDYW 722
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 178/388 (45%), Gaps = 40/388 (10%)
Query: 130 HARQVFDEMPNK-DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
+A VF +P+ +++ + + +++ A +LF +R G R ++F+ ++K
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEP-RATILFYQRIRH-VGGRLDQFSFLPILK 119
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ + +G ++HG +K + FV + +DMYA CG + A+ VFDE+ ++ V
Sbjct: 120 AVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDVV 178
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
+WN +I LF +M+ E ++ + G++ + ++
Sbjct: 179 TWNTMI--ERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 309 HMLKSGRKLVGYVGNTLLHMYA-------------------------------KSGSISD 337
++++ ++ ++ L+ MYA K G + D
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
A+ +FD+ K D+V +M+ Y + + +EA+ +F++M GI+P+ ++ S+++AC++
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGA 457
G+LD+ + + G+E ++S ++++ + G LD E M + W +
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSS 415
Query: 458 LLGASWMHKKIE--MGAYAAQKVFELDP 483
++ A MH + + +A K ++P
Sbjct: 416 MINALSMHGEASDALSLFARMKQENVEP 443
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ L V + + ++PD ++ C LG L + + VHS + + +L I N
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS--CIHVNGLESELSINN 383
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ MYA+CG L+ R VF++MP ++ V+W+SMI + + A DAL LF M +
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ--ENV 441
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCW-KHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
PNE T ++ C +G+++ ++ + +VD++ R L EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 236 AVFDELGRWKNEVSWNALI 254
V + + N V W +L+
Sbjct: 502 EVIESMPVASNVVIWGSLM 520
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 314/535 (58%), Gaps = 10/535 (1%)
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
D+ ++ +VF + N +MI ++ ++ + LF LR S N + S
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRS-LRRNSSLPANPLSSSFA 119
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+KCC G Q+HG + GF + + ++L+D+Y+ C +A VFDE+ + ++
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK-RD 178
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE---FTYSALLCSASSVGSLEQG 303
VSWN L LF KM+ + G + T L + +++G+L+ G
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLV--LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K +H + ++G + NTL+ MY++ GS+ A +VF + + +VVS +++ G A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR--QFGVEPKVS 421
GFGKEA+ F +ML+ GI P + T LL+ACSH+GL+ EG +F MR +F ++P +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
HY +VDLLGRA LLD+A S I+ M ++P + IW LLGA +H +E+G + EL
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 482 DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIA 541
+G +VLL N Y++ G+W++ +R +MK+ + +P CS +E++ +VH F+ +D++
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 542 HPQKDKIIKMWEKLNQEIKEIGYVPD-TRHVLLFVDQHEKELNLQYHSEKLALAFALLNT 600
HP+K++I KM ++NQ++K GYV + T + + EK L+YHSEKLA+AF +L T
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVT 536
Query: 601 SPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
PG+TIR+ KN+R C DCH+ K+V+ + R +IVRD +RFHHF G CSC D+W
Sbjct: 537 PPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 35 DNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDR------GAVEPDRALYQRLLKTCTKL 88
D +P+ D + + LR +T VL L D+ G V+PD L+ C L
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTR-DVLVLFDKMKNDVDGCVKPDGVTCLLALQACANL 230
Query: 89 GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G L G+ VH F+ +N + L + N+++ MY+RCG ++ A QVF M ++ V+WT+
Sbjct: 231 GALDFGKQVHD-FIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTA 288
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+I+G A N +A+ F +ML+ G P E TL+ L+ C
Sbjct: 289 LISGLAMNGFGKEAIEAFNEMLKFGIS--PEEQTLTGLLSAC 328
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 340/624 (54%), Gaps = 52/624 (8%)
Query: 78 YQR---LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQV 134
YQ+ LL+ C LR G+ +H+ + N++ YA G++ A+++
Sbjct: 6 YQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKL 65
Query: 135 FDEMP--NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
FDE+P KD V WT++++ +++ V+++ LF +M R ++ ++ L C
Sbjct: 66 FDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRR--KRVEIDDVSVVCLFGVCAK 123
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG---------- 242
+ G +Q HG K G +V V ++L+DMY +CG + E + +F+EL
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 243 -----RW---------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ-REGYG 281
+W +N V+W ++ L A+M R G+G
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLE--LLAEMVFRCGHG 241
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--------YVGNTLLHMYAKSG 333
+ T ++L + + G+L G+W+H + LK ++G VG L+ MYAK G
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKK-EMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 334 SISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
+I + VF + K +VV+ N++ G A HG G+ + +F QM+R+ ++P+D+TF ++L+
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLS 359
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAA 453
ACSH+G++DEG R F +R +G+EPKV HYA +VDLLGRAGL++ A + M + P
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 454 IWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMK 513
+ G+LLG+ +H K+E+ +++ ++ P + +L++N+Y + GR A +R ++
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLR 479
Query: 514 DSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLL 573
G++K P S + + +SVH F S D +HP+ +I ++ + I+ GYVPD ++
Sbjct: 480 KRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVS 539
Query: 574 FV--DQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKR 631
D EKE L HSEKLA+ F LL T P + + + KN+R+C DCHSAMK V+ + R
Sbjct: 540 HSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDR 599
Query: 632 EIIVRDTNRFHHFCDGFCSCGDYW 655
EII+RD NRFH F G CSC DYW
Sbjct: 600 EIIIRDRNRFHQFKGGSCSCSDYW 623
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/459 (39%), Positives = 283/459 (61%), Gaps = 5/459 (1%)
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G +H + GF ++V +SL+ +YA CG + A VFD++ K+ V+WN++I
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVAWNSVINGFA 65
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
L+ +M +G FT +LL + + +G+L GK +H +M+K G
Sbjct: 66 ENGKPEEALA--LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM-L 377
+ N LL +YA+ G + +A+ +FD +V + VS S+++G A +GFGKEA+ LFK M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLL 436
+G+ P +ITF+ +L ACSH G++ EG YF+ MR+ + +EP++ H+ +VDLL RAG +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 437 DRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIY 496
+A +I+ M ++P IW LLGA +H ++ +A ++ +L+P +SG +VLL+N+Y
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 497 ASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLN 556
AS RW + IRK M G+KK P S VE+ N VH F+ D +HPQ D I +++
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 557 QEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCG 616
++ GYVP +V + V++ EKE + YHSEK+A+AF L++T S I ++KN+RVC
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 617 DCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
DCH A+K V+ + REI+VRD +RFHHF +G CSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 161/314 (51%), Gaps = 17/314 (5%)
Query: 88 LGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWT 147
+ +R G +HS ++ + +QNS+L +YA CGD+ A +VFD+MP KD V W
Sbjct: 1 MADVRLGETIHS--VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 58
Query: 148 SMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCW 207
S+I G+A+N + +AL L+ +M G +P+ FT+ SL+ C I + G++VH
Sbjct: 59 SVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 208 KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXX 267
K G N+ + L+D+YARCG + EA+ +FDE+ KN VSW +LI
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLI--VGLAVNGFGKE 173
Query: 268 XXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN--T 324
LF M+ EG E T+ +L + S G +++G + + ++ K+ + +
Sbjct: 174 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG-FEYFRRMREEYKIEPRIEHFGC 232
Query: 325 LLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
++ + A++G + A + + ++ +VV ++L HG A Q+L+ +EP
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ--LEP 290
Query: 384 N---DITFLSLLTA 394
N D LS + A
Sbjct: 291 NHSGDYVLLSNMYA 304
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 35 DNVPELDKSYY--IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D +PE D + +I+ + + L + ++ ++PD LL C K+G L
Sbjct: 47 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 106
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
G+ VH + + + +L N +L +YARCG +E A+ +FDEM +K++V+WTS+I G
Sbjct: 107 LGKRVHVYMI--KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ-VHGCCWKHGF 211
A N +A+ LF M G P E T ++ C +G + ++
Sbjct: 165 LAVNGFGKEAIELFKYM-ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
+ +VD+ AR G + +A + N V W L+
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 338/590 (57%), Gaps = 16/590 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V + A Y+ +++ ++ +L++ VH+H ++ L+ + L AR + +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQLQQ---VHAHLIVTGYGRSRSLLTKLITLACSARA--IAY 59
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+F +P D + S+I ++ + + + ML S P+ +T +S++K C
Sbjct: 60 THLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRML--SSNVSPSNYTFTSVIKSC 117
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ + G+ VH GF + +V ++LV Y++CG + A+ VFD + K+ V+W
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPE-KSIVAW 176
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N+L+ +F +M+ G+ T+ +LL + + G++ G W+H ++
Sbjct: 177 NSLVSGFEQNGLADEAIQ--VFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYI 234
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+ G L +G L+++Y++ G + AR+VFD++ + +V + +M+ Y HG+G++AV
Sbjct: 235 ISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAV 294
Query: 371 VLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVD 428
LF +M D G PN++TF+++L+AC+HAGL++EG ++ M + + + P V H+ +VD
Sbjct: 295 ELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVD 354
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTA---AIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
+LGRAG LD A FI + A A+W A+LGA MH+ ++G A+++ L+P
Sbjct: 355 MLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDN 414
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQK 545
G HV+L+NIYA +G+ E ++IR M + L+K+ S +E+EN ++F D +H +
Sbjct: 415 PGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQET 474
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGST 605
+I + E L KEIGY P + V+ V++ EKE L+YHSEKLA+AF LL T
Sbjct: 475 GEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VA 533
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
I I+KN+R+C DCHSA KY++++ R+I VRD RFHHF +G CSC DYW
Sbjct: 534 ITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 357 bits (916), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 214/612 (34%), Positives = 329/612 (53%), Gaps = 48/612 (7%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL--EHARQVFDEMP 139
L C L ++++ +H H L + D I ++ + G +AR+V + +
Sbjct: 56 LDDCINLNQIKQ---IHGHVLRKGLD--QSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 140 NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
++ WT++I GYA + +A+ ++ M + P FT S+L+K CG + G
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK--EEITPVSFTFSALLKACGTMKDLNLG 168
Query: 200 RQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-----W--------- 244
RQ H ++ GFC V+VG++++DMY +C + A+ VFDE+ W
Sbjct: 169 RQFHAQTFRLRGFC-FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 245 ----------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
K+ V+W A++ F +M++ G E T +
Sbjct: 228 VGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALE--YFDRMEKSGIRADEVTVA 285
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV--GNTLLHMYAKSGSISDARKVFDRLV 346
+ + + +G+ + KSG +V G+ L+ MY+K G++ +A VF +
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITFLSLLTACSHAGLLDEGE 405
+V + +SM++G A HG +EA+ LF M+ + I+PN +TF+ L ACSH+GL+D+G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 406 RYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
+ F M Q FGV+P HY +VDLLGR G L A+ I+ M +EP +WGALLGA +
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
H E+ AA+ +FEL+P G ++LL+N+YASAG W +RK++K+ GLKK PA S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 525 WVEIEN-SVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELN 583
WV +N +H F ++ HP +KI E+L + + +GY PD V V + K L
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLI 585
Query: 584 LQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHH 643
L H+EKLALAF+LL T+ STI IMKN+R+C DCH M+ + + + II+RD RFHH
Sbjct: 586 LIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHH 645
Query: 644 FCDGFCSCGDYW 655
F G CSCGD+W
Sbjct: 646 FRSGDCSCGDFW 657
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE-- 233
S E +SSL+ + +Q+HG + G + ++ + L+ + G +
Sbjct: 42 SNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY 101
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
A+ V + + +++N W A+I ++ M++E FT+SALL +
Sbjct: 102 ARRVIEPV-QFRNPFLWTAVIRGYAIEGKFDEAIA--MYGCMRKEEITPVSFTFSALLKA 158
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVS- 352
++ L G+ H + YVGNT++ MY K SI ARKVFD + + DV+S
Sbjct: 159 CGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISW 218
Query: 353 --------------C----------------NSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
C +M+ G+AQ+ +EA+ F +M + GI
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPK--VSHYAKIVDLLGRAGLLDRAM 440
+++T ++AC+ G +R Q+ ++ G P V + ++D+ + G ++ A+
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 441 SFIEGM 446
+ M
Sbjct: 339 NVFMSM 344
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
+ + L D +++ + D + C +LG + D +VI
Sbjct: 261 KPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVI 320
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
++++ MY++CG++E A VF M NK+ T++SMI G A + RA +AL LF M+ +
Sbjct: 321 GSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVT-QT 379
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGE 233
+PN T + C GRQV ++ G + +VD+ R G L E
Sbjct: 380 EIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQE 439
Query: 234 AQAVFDELGRWKNEVSWNALI 254
A + + + W AL+
Sbjct: 440 ALELIKTMSVEPHGGVWGALL 460
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/616 (34%), Positives = 333/616 (54%), Gaps = 52/616 (8%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD----------LEH 130
LL++C+ L+ ++H FLL+ + D V + A C D L +
Sbjct: 18 LLQSCSSFSDLK---IIHG-FLLRTHLISDVFVASR----LLALCVDDSTFNKPTNLLGY 69
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A +F ++ N + + +I ++ A + ML+ S P+ T L+K
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK--SRIWPDNITFPFLIKAS 127
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G Q H + GF ++V+V +SLV MYA CGF+ A +F ++G +++ VSW
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG-FRDVVSW 186
Query: 251 NAL-----------------------------IXXXXXXXXXXXXXXXXLFAKMQREGYG 281
++ I LF M+REG
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
E +++ S + +G+LE G+ + +++KS + +G L+ M+ + G I A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F+ L + D +S +S++ G A HG +A+ F QM+ G P D+TF ++L+ACSH GL+
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 402 DEG-ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
++G E Y + + G+EP++ HY IVD+LGRAG L A +FI M ++P A I GALLG
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 461 ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE 520
A ++K E+ + ++ P +SG +VLL+NIYA AG+W + ++R MMK+ +KK
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 521 PACSWVEIENSVHVF-VSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHE 579
P S +EI+ ++ F + +D HP+ KI + WE++ +I+ IGY +T VD+ E
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEE 546
Query: 580 KELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTN 639
KE ++ HSEKLA+A+ ++ T PG+TIRI+KN+RVC DCH+ K ++ + RE+IVRD N
Sbjct: 547 KESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRN 606
Query: 640 RFHHFCDGFCSCGDYW 655
RFHHF +G CSC DYW
Sbjct: 607 RFHHFRNGVCSCRDYW 622
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 38/271 (14%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + L+K +++ + G HS + ++D+ ++NS++ MYA CG + A
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIV--RFGFQNDVYVENSLVHMYANCGFIAAAG 172
Query: 133 QVFDEMPNKDTVTWTS-------------------------------MITGYAQNERAVD 161
++F +M +D V+WTS MI GYA+N
Sbjct: 173 RIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEK 232
Query: 162 ALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL 221
A+ LF M R G NE + S++ C + + G + + K N+ +G++L
Sbjct: 233 AIDLFEFMKR--EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTAL 290
Query: 222 VDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
VDM+ RCG + +A VF+ L + +SW+++I F++M G+
Sbjct: 291 VDMFWRCGDIEKAIHVFEGLPE-TDSLSWSSII--KGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+ T++A+L + S G +E+G ++ +M K
Sbjct: 348 PRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 45/319 (14%)
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA-------RCGFLGEAQAV 237
+L++ C S+ D + +HG + +VFV S L+ + LG A +
Sbjct: 17 ALLQSCS---SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
F ++ N +N LI + +M + T+ L+ ++S +
Sbjct: 74 FSQIQN-PNLFVFNLLIRCFSTGAEPSKAFG--FYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
+ G+ H +++ G + YV N+L+HMYA G I+ A ++F ++ DVVS SM+
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 358 IGYAQ--------------------------HGFGK-----EAVVLFKQMLRDGIEPNDI 386
GY + +G+ K +A+ LF+ M R+G+ N+
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+S++++C+H G L+ GER ++ + + + + +VD+ R G +++A+ EG
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG- 309
Query: 447 LIEPTAAIWGALLGASWMH 465
L E + W +++ +H
Sbjct: 310 LPETDSLSWSSIIKGLAVH 328
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 304/532 (57%), Gaps = 49/532 (9%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ +L C+ L + +G VHS L+ D+ I ++++ MY++CG++ A++VFDE
Sbjct: 155 FASVLSACSGLNDMNKGVQVHS--LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
M +++ V+W S+IT + QN AV+AL +F ML S P+E TL+S++ C + +
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLE--SRVEPDEVTLASVISACASLSAIK 270
Query: 198 DGRQVHGCCWKHGFCDN-VFVGSSLVDMYARCGFLGEAQAVFDELG-------------- 242
G++VHG K+ N + + ++ VDMYA+C + EA+ +FD +
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 243 ----------------RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
+N VSWNALI LF ++RE T ++
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS--LFCLLKRESVCPTHYS 388
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG------YVGNTLLHMYAKSGSISDARK 340
++ +L + + + L G H H+LK G K +VGN+L+ MY K G + +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
VF ++++ D VS N+M+IG+AQ+G+G EA+ LF++ML G +P+ IT + +L+AC HAG
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 401 LDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
++EG YF M R FGV P HY +VDLLGRAG L+ A S IE M ++P + IWG+LL
Sbjct: 509 VEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Query: 460 GASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK 519
A +H+ I +G Y A+K+ E++P SG +VLL+N+YA G+W++ N+RK M+ G+ K
Sbjct: 569 AACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTK 628
Query: 520 EPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHV 571
+P CSW++I+ HVF+ D +HP+K +I + + L E++ P+ H
Sbjct: 629 QPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR-----PEQDHT 675
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 192/386 (49%), Gaps = 42/386 (10%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D + + +LL +C K KL + + H + +++ IQN ++ Y++CG LE RQ
Sbjct: 18 DSSPFAKLLDSCIK-SKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 134 VFDEMPNK-------------------------------DTVTWTSMITGYAQNERAVDA 162
VFD+MP + D TW SM++G+AQ++R +A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 163 LVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
L F M + G NE++ +S++ C + G QVH K F +V++GS+LV
Sbjct: 137 LCYFAMMHK--EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
DMY++CG + +AQ VFDE+G +N VSWN+LI +F M
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGD-RNVVSWNSLI--TCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV-GNTLLHMYAKSGSISDARKV 341
E T ++++ + +S+ +++ G+ +HG ++K+ + + N + MYAK I +AR +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
FD + +V++ SM+ GYA K A ++F +M E N +++ +L+ + G
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM----AERNVVSWNALIAGYTQNGEN 367
Query: 402 DEGERYFQLMRQFGVEPKVSHYAKIV 427
+E F L+++ V P +A I+
Sbjct: 368 EEALSLFCLLKRESVCPTHYSFANIL 393
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 169/359 (47%), Gaps = 50/359 (13%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-----W---------- 244
R VH K GF + +F+ + L+D Y++CG L + + VFD++ + W
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 245 ---------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
+++ +WN+++ FA M +EG+ + E+++++
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC--YFAMMHKEGFVLNEYSFAS 157
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
+L + S + + +G +H + KS Y+G+ L+ MY+K G+++DA++VFD + +
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERYF 408
VVS NS++ + Q+G EA+ +F+ ML +EP+++T S+++AC+ + G E +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM----LIEPTAAIWGALLGASWM 464
++++ + + VD+ + + A + M +I T+ I G + AS
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPAC 523
++ A + V + +G Y G +EA ++ + LK+E C
Sbjct: 338 AARLMFTKMAERNVVSWNALIAG--------YTQNGENEEALSLFCL-----LKRESVC 383
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 86/379 (22%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L V ++ VEPD ++ C L ++ G+ VH +++N +R+D+++ N+
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR-VVKNDKLRNDIILSNAF 295
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM--------- 169
+ MYA+C ++ AR +FD MP ++ + TSMI+GYA A ++F M
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWN 355
Query: 170 ------LRGGSGSR--------------PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH 209
+ G P ++ ++++K C + G Q H KH
Sbjct: 356 ALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKH 415
Query: 210 GFC------DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXX 263
GF D++FVG+SL+DMY +CG + E VF ++ ++ VSWNA+I
Sbjct: 416 GFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME-RDCVSWNAMIIG------- 467
Query: 264 XXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN 323
FA+ GYG + L ML+SG K
Sbjct: 468 --------FAQ---NGYG-------------------NEALELFREMLESGEKPDHITMI 497
Query: 324 TLLHMYAKSGSISDARKVFDRLVK-------VDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
+L +G + + R F + + D +C L+G A GF +EA + ++M
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA--GFLEEAKSMIEEM 555
Query: 377 LRDGIEPNDITFLSLLTAC 395
++P+ + + SLL AC
Sbjct: 556 ---PMQPDSVIWGSLLAAC 571
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSH-----FLLQNPDVR 109
++ L + L+ R +V P + +LK C L +L G H H F Q+ +
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGE-E 424
Query: 110 DDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM 169
DD+ + NS++ MY +CG +E VF +M +D V+W +MI G+AQN +AL LF +M
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH-GFCDNVFVGSSLVDMYARC 228
L SG +P+ T+ ++ CG +GR + G + +VD+ R
Sbjct: 485 LE--SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALI 254
GFL EA+++ +E+ + V W +L+
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLL 568
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/599 (37%), Positives = 318/599 (53%), Gaps = 55/599 (9%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
++++ +G V PD + ++K LR G +H L + L + +++ MY
Sbjct: 94 VEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHG--LESHLFVGTTLIGMY 151
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
CG +E AR+VFDEM + V W ++IT + A +F ML S
Sbjct: 152 GGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS------ 205
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
W NV + Y + G L A+ +F E+
Sbjct: 206 ------------------------W------NVMLAG-----YIKAGELESAKRIFSEMP 230
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
+++VSW+ +I F ++QR G E + + +L + S GS E
Sbjct: 231 H-RDDVSWSTMIVGIAHNGSFNESFL--YFRELQRAGMSPNEVSLTGVLSACSQSGSFEF 287
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-KVDVVSCNSMLIGYA 361
GK LHG + K+G + V N L+ MY++ G++ AR VF+ + K +VS SM+ G A
Sbjct: 288 GKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLA 347
Query: 362 QHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKV 420
HG G+EAV LF +M G+ P+ I+F+SLL ACSHAGL++EGE YF M R + +EP++
Sbjct: 348 MHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEI 407
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE 480
HY +VDL GR+G L +A FI M I PTA +W LLGA H IE+ Q++ E
Sbjct: 408 EHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Query: 481 LDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDI 540
LDP SG VLL+N YA+AG+WK+ A+IRK M +KK A S VE+ +++ F + +
Sbjct: 468 LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE- 526
Query: 541 AHPQKDKIIKMWEKLNQEI----KEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFA 596
+K I+ EKL + I E GY P+ L V++ EKE + HSEKLALAFA
Sbjct: 527 --KKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFA 584
Query: 597 LLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
L S G+ IRI+KN+R+C DCH+ MK + + EI+VRD NRFH F DG CSC DYW
Sbjct: 585 LARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 175/390 (44%), Gaps = 48/390 (12%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD-LEHARQVFDEMP 139
LL +C L L + +H F+ D D +L D L +AR++ P
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDT-DSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 140 NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
D + +++ GY++++ +++ +F +M+R G P+ F+ + ++K S G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGF-VFPDSFSFAFVIKAVENFRSLRTG 125
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
Q+H KHG ++FVG++L+ MY CG + A+ VFDE+ + N V+WNA+I
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ-PNLVAWNAVITACFR 184
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
G E L+ + +S + L G
Sbjct: 185 GNDVA----------------GAREIFDKMLVRNHTSWNVM----------------LAG 212
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
Y+ K+G + A+++F + D VS ++M++G A +G E+ + F+++ R
Sbjct: 213 YI---------KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRA 263
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G+ PN+++ +L+ACS +G + G+ + + G VS ++D+ R G + A
Sbjct: 264 GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMA 323
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
EGM + W +++ MH + E
Sbjct: 324 RLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 238/374 (63%), Gaps = 4/374 (1%)
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
+F++++ L + + +G L KW+H M+ SG +L + + L+ +YAK G I +R+VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+ + DV N+M+ G+A HG EA+ +F +M + + P+ ITFL LLT CSH GLL+
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 403 EGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
EG+ YF LM R+F ++PK+ HY +VDLLGRAG + A IE M IEP IW +LL +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 462 SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEP 521
S +K E+G A Q L SG +VLL+NIY+S +W+ A +R++M G++K
Sbjct: 344 SRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 522 ACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKE 581
SW+E +H F + D +H + I K+ E L Q+ K G+V DT VL+ V + EKE
Sbjct: 401 GKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKE 460
Query: 582 LNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRF 641
NL YHSEKLALA+ +L +SPG+ IRI KNIR+C DCH+ +K V+ ++ R II+RD RF
Sbjct: 461 ENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRF 520
Query: 642 HHFCDGFCSCGDYW 655
H F DG CSC DYW
Sbjct: 521 HRFEDGLCSCRDYW 534
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 101 FLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAV 160
FL +P V + +I S++ + G+ A++V +++ +TW MI GY +N +
Sbjct: 91 FLSLSPGVCNINLIIESLM----KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYE 146
Query: 161 DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSS 220
+AL +ML + +PN+F+ +S + C + + VH G N + S+
Sbjct: 147 EALKALKNML-SFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSA 205
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVS-WNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
LVD+YA+CG +G ++ VF + R N+VS WNA+I +F++M+ E
Sbjct: 206 LVDVYAKCGDIGTSREVFYSVKR--NDVSIWNAMI--TGFATHGLATEAIRVFSEMEAEH 261
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS---GRKLVGYVGNTLLHMYAKSGSIS 336
T+ LL + S G LE+GK G M + KL Y ++ + ++G +
Sbjct: 262 VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHY--GAMVDLLGRAGRVK 319
Query: 337 DARKVFDRL-VKVDVVSCNSML 357
+A ++ + + ++ DVV S+L
Sbjct: 320 EAYELIESMPIEPDVVIWRSLL 341
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 91/185 (49%), Gaps = 5/185 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++P++ + L C +LG L + VHS L+ + + + ++ ++++ +YA+CGD+
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHS--LMIDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+R+VF + D W +MITG+A + A +A+ +F +M P+ T L+ C
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM--EAEHVSPDSITFLGLLTTC 276
Query: 191 GLIPSYGDGRQVHGCCWKH-GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
+G++ G + + ++VD+ R G + EA + + + + V
Sbjct: 277 SHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVI 336
Query: 250 WNALI 254
W +L+
Sbjct: 337 WRSLL 341
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/504 (36%), Positives = 293/504 (58%), Gaps = 17/504 (3%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R V P R + LLK + KLR+ H + + D ++NS++ Y+ G
Sbjct: 97 RNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ A ++FD +KD VTWT+MI G+ +N A +A+V F +M + G + NE T+ S++
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA--NEMTVVSVL 211
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGF--CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
K G + GR VHG + G CD VF+GSSLVDMY +C +AQ VFDE+ +
Sbjct: 212 KAAGKVEDVRFGRSVHGLYLETGRVKCD-VFIGSSLVDMYGKCSCYDDAQKVFDEMPS-R 269
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
N V+W ALI +F +M + E T S++L + + VG+L +G+
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGML--VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+H +M+K+ ++ G TL+ +Y K G + +A VF+RL + +V + +M+ G+A HG+
Sbjct: 328 VHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGY 387
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYA 424
++A LF ML + PN++TF+++L+AC+H GL++EG R F M+ +F +EPK HYA
Sbjct: 388 ARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYA 447
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDL GR GLL+ A + IE M +EPT +WGAL G+ +HK E+G YAA +V +L P
Sbjct: 448 CMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPS 507
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHP- 543
+SG + LLAN+Y+ + W E A +RK MKD + K P SW+E++ + F++ D P
Sbjct: 508 HSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPL 567
Query: 544 QKDKIIKMWEKLNQEIKEIGYVPD 567
+ D + K + + +++ +PD
Sbjct: 568 ESDDLYKTLDTVGVQMR----LPD 587
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
G+ V + + + V P+ +L C +G L GR VH + + + ++ + ++
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI--NTTAGTTL 347
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ +Y +CG LE A VF+ + K+ TWT+MI G+A + A DA LF ML S P
Sbjct: 348 IDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML--SSHVSP 405
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQV----HGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
NE T +++ C +GR++ G D+ + +VD++ R G L EA
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY---ACMVDLFGRKGLLEEA 462
Query: 235 QAVFDELGRWKNEVSWNALI 254
+A+ + + V W AL
Sbjct: 463 KALIERMPMEPTNVVWGALF 482
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/607 (32%), Positives = 317/607 (52%), Gaps = 51/607 (8%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
SK + VL + ++P + LL+ + G L+ G+ +H ++L+N + D+ ++
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG-YILRN-QLWYDVYVE 263
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+++ MY + G L +AR VFD M K+ V W S+++G + DA L M + G
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK--EG 321
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
+P+ T W +SL YA LG+ +
Sbjct: 322 IKPDAIT------------------------W-----------NSLASGYAT---LGKPE 343
Query: 236 AVFDELGRWK------NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
D +G+ K N VSW A+ +F KMQ EG G T S
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK--VFIKMQEEGVGPNAATMST 401
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
LL + L GK +HG L+ YV L+ MY KSG + A ++F +
Sbjct: 402 LLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKS 461
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
+ S N ML+GYA G G+E + F ML G+EP+ ITF S+L+ C ++GL+ EG +YF
Sbjct: 462 LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFD 521
Query: 410 LMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
LMR ++G+ P + H + +VDLLGR+G LD A FI+ M ++P A IWGA L + +H+ +
Sbjct: 522 LMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDL 581
Query: 469 EMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI 528
E+ A +++ L+P S ++++ N+Y++ RW++ IR +M+++ ++ + SW++I
Sbjct: 582 ELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
Query: 529 ENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHS 588
+ +VH+F + HP + I KL E+K+ GYVPDT + + EKE L H+
Sbjct: 642 DQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHT 701
Query: 589 EKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGF 648
EKLA+ + L+ + IR++KN +C D H+ KY++++ REI++++ R HHF DG
Sbjct: 702 EKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGK 761
Query: 649 CSCGDYW 655
CSC D W
Sbjct: 762 CSCNDSW 768
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 210/472 (44%), Gaps = 52/472 (11%)
Query: 94 GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGY 153
G +H + + D D V+ S+ F Y RC L A ++FDEMP +D + W ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGF-YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 154 AQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD 213
++ A+ LF +M SG++ + T+ L++ C + +GRQ+HG + G
Sbjct: 65 LRSGNWEKAVELFREMQF--SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 214 NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX-------------- 259
NV + +SL+ MY+R G L ++ VF+ + + +N SWN+++
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSM-KDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 260 -------------------XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
+ +MQ G + + S+LL + + G L
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
+ GK +HG++L++ YV TL+ MY K+G + AR VFD + ++V+ NS++ G
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
+ K+A L +M ++GI+P+ IT+ SL + + G ++ M++ GV P V
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAIWGALLGA----SWMHKKIEMGAY 473
+ I + G A+ M E P AA LL S +H E+ +
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
+K D + + A L ++Y +G + A I G+K + SW
Sbjct: 422 CLRKNLICDAYVATA---LVDMYGKSGDLQSAIEIF-----WGIKNKSLASW 465
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 189/438 (43%), Gaps = 78/438 (17%)
Query: 80 RLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
+LL+ C+ EGR +H + L + ++ + NS++ MY+R G LE +R+VF+ M
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVL--RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 140 NK-----------------------------------DTVTWTSMITGYAQNERAVDALV 164
++ D VTW S+++GYA + DA+
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDM 224
+ M +G +P+ ++SSL++ G+ +HG ++ +V+V ++L+DM
Sbjct: 212 VLKRMQI--AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
Y + G+L A+ VFD + KN V+WN+L+ L +M++EG
Sbjct: 270 YIKTGYLPYARMVFDMMDA-KNIVAWNSLV--SGLSYACLLKDAEALMIRMEKEGIKPDA 326
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
T+++L +++G E+ + G M + G
Sbjct: 327 ITWNSLASGYATLGKPEKALDVIGKMKEKG------------------------------ 356
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
V +VVS ++ G +++G + A+ +F +M +G+ PN T +LL LL G
Sbjct: 357 -VAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG 415
Query: 405 ERY--FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS 462
+ F L + + V+ +VD+ G++G L A+ G + + A W +L
Sbjct: 416 KEVHGFCLRKNLICDAYVA--TALVDMYGKSGDLQSAIEIFWG-IKNKSLASWNCMLMGY 472
Query: 463 WMHKKIEMGAYAAQKVFE 480
M + E G A + E
Sbjct: 473 AMFGRGEEGIAAFSVMLE 490
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/509 (35%), Positives = 293/509 (57%), Gaps = 10/509 (1%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K + + + + ++PD +L +C L L G VH++ + N + +D + N
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN--LGNDSYVTN 389
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ---NERAVDALVLFPDMLRGG 173
S++ MYA+C L AR+VFD D V + +MI GY++ +AL +F DM
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM--RF 447
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
RP+ T SL++ + S G +Q+HG +K+G ++F GS+L+D+Y+ C L +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
++ VFDE+ + K+ V WN++ L ++ RE EFT++ ++ +
Sbjct: 508 SRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER--PDEFTFANMVTA 564
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
A ++ S++ G+ H +LK G + Y+ N LL MYAK GS DA K FD DVV
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
NS++ YA HG GK+A+ + ++M+ +GIEPN ITF+ +L+ACSHAGL+++G + F+LM +
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
FG+EP+ HY +V LLGRAG L++A IE M +P A +W +LL +E+ +
Sbjct: 685 FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEH 744
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
AA+ DP SG+ +L+NIYAS G W EA +R+ MK G+ KEP SW+ I VH
Sbjct: 745 AAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Query: 534 VFVSNDIAHPQKDKIIKMWEKLNQEIKEI 562
+F+S D +H + ++I ++ + L +I+ +
Sbjct: 805 IFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 193/381 (50%), Gaps = 6/381 (1%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
RS L + + V PD + +L C+ L L G+ +H+H L ++ D +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEM--DASL 286
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
N ++ Y +CG + A ++F+ MPNK+ ++WT++++GY QN +A+ LF M +
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK--F 344
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
G +P+ + SS++ C + + G G QVH K ++ +V +SL+DMYA+C L +A
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXX-XXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+ VFD + V +NA+I +F M+ + T+ +LL +
Sbjct: 405 RKVFDIFAA-ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
++S+ SL K +HG M K G L + G+ L+ +Y+ + D+R VFD + D+V
Sbjct: 464 SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIW 523
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
NSM GY Q +EA+ LF ++ P++ TF +++TA + + G+ + + +
Sbjct: 524 NSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK 583
Query: 414 FGVEPKVSHYAKIVDLLGRAG 434
G+E ++D+ + G
Sbjct: 584 RGLECNPYITNALLDMYAKCG 604
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 170/326 (52%), Gaps = 12/326 (3%)
Query: 75 RALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQV 134
R + RLL+ L +VH ++ ++ D + N ++ +Y+R G + +AR+V
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLEL--DTYLSNILINLYSRAGGMVYARKV 101
Query: 135 FDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
F++MP ++ V+W++M++ + ++LV+F + R S PNE+ LSS ++ C +
Sbjct: 102 FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDS-PNEYILSSFIQACSGLD 160
Query: 195 SYGDGR----QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
G GR Q+ K GF +V+VG+ L+D Y + G + A+ VFD L K+ V+W
Sbjct: 161 --GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTW 217
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
+I LF ++ + + S +L + S + LE GK +H H+
Sbjct: 218 TTMISGCVKMGRSYVSLQ--LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
L+ G ++ + N L+ Y K G + A K+F+ + +++S ++L GY Q+ KEA+
Sbjct: 276 LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAM 335
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACS 396
LF M + G++P+ S+LT+C+
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCA 361
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 288/500 (57%), Gaps = 35/500 (7%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+ + C + L EG ++ L + D+ + N+ + MY +C L A +VFDEM
Sbjct: 388 VFRACALVKGLSEGLQIYG--LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
+D V+W ++I + QN + + L LF MLR S P+EFT S++K C S G G
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLR--SRIEPDEFTFGSILKAC-TGGSLGYGM 502
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV-------------FDELGRWKNE 247
++H K G N VG SL+DMY++CG + EA+ + +EL + N+
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 248 ------VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
VSWN++I LF +M G +FTY+ +L + +++ S
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQM--LFTRMMEMGITPDKFTYATVLDTCANLASAG 620
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA 361
GK +H ++K + Y+ +TL+ MY+K G + D+R +F++ ++ D V+ N+M+ GYA
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 362 QHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKV 420
HG G+EA+ LF++M+ + I+PN +TF+S+L AC+H GL+D+G YF +M R +G++P++
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHK-KIEMGAYAAQKVF 479
HY+ +VD+LG++G + RA+ I M E IW LLG +H+ +E+ A +
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 480 ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSND 539
LDP S A+ LL+N+YA AG W++ +++R+ M+ LKKEP CSWVE+++ +HVF+ D
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGD 860
Query: 540 IAHPQKDKIIKMWEKLNQEI 559
AHP+ WE++ +E+
Sbjct: 861 KAHPR-------WEEIYEEL 873
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQN---------------PDVRD------------ 110
+ + K C K G L G+ H+H ++ + RD
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 111 --DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
D+V N ++ Y++ D+ A F+ MP +D V+W SM++GY QN ++ ++ +F D
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M G G + T + ++K C + G Q+HG + G +V S+L+DMYA+
Sbjct: 171 M--GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
E+ VF + KN VSW+A+I F +MQ+ GV++ Y+
Sbjct: 229 KRFVESLRVFQGIPE-KNSVSWSAIIAGCVQNNLLSLALK--FFKEMQKVNAGVSQSIYA 285
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
++L S +++ L G LH H LKS G V L MYAK ++ DA+ +FD +
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
+ S N+M+ GY+Q G +A++LF +++ G+ ++I+ + AC+ L EG + +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
L + + V +D+ G+ L A + M A W A++ A
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 8/372 (2%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R +E D + +LK C+ L G +H + D D+V +++L MYA+
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT--DVVAASALLDMYAKGKR 230
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ +VF +P K++V+W+++I G QN AL F +M + +G + + +S++
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY--ASVL 288
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
+ C + G Q+H K F + V ++ +DMYA+C + +AQ +FD N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN-SENLNR 347
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
S+NA+I LF ++ G G E + S + + + V L +G ++
Sbjct: 348 QSYNAMITGYSQEEHGFKALL--LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G +KS L V N + MY K ++++A +VFD + + D VS N+++ + Q+G G
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
E + LF MLR IEP++ TF S+L AC+ G L G + + G+ S ++
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 428 DLLGRAGLLDRA 439
D+ + G+++ A
Sbjct: 525 DMYSKCGMIEEA 536
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ PD+ Y +L TC L G+ +H+ + +++ D+ I ++++ MY++CGDL
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVI--KKELQSDVYICSTLVDMYSKCGDLH 655
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+R +F++ +D VTW +MI GYA + + +A+ LF M+ +PN T S+++
Sbjct: 656 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL--ENIKPNHVTFISILRA 713
Query: 190 CGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C + G + + +G + S++VD+ + G + A + E+ ++V
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 249 SWNALI 254
W L+
Sbjct: 774 IWRTLL 779
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 276 QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSI 335
Q T F++ C+ G+LE GK H HM+ SG + +V N LL +Y S
Sbjct: 42 QVNSVSTTNFSFVFKECAKQ--GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 336 SDARKVFDRL--------------------------------VKVDVVSCNSMLIGYAQH 363
A VFD++ V+ DVVS NSML GY Q+
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR-DVVSWNSMLSGYLQN 158
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
G +++ +F M R+GIE + TF +L CS G + ++ + G + V
Sbjct: 159 GESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAA 218
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ ++D+ + ++ +G + E + W A++
Sbjct: 219 SALLDMYAKGKRFVESLRVFQG-IPEKNSVSWSAIIAG 255
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 204/597 (34%), Positives = 312/597 (52%), Gaps = 53/597 (8%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
L+ R V+PDR + +LK+ +KLG GR +H+ L D D ++ S++ MYA+
Sbjct: 116 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDC--DSFVRLSLVDMYAK 173
Query: 125 CGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
G L+HA QVF+E P++ + W +I GY + + A LF M SGS
Sbjct: 174 TGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGS---- 229
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
W S+L+ Y G L A+ +F E
Sbjct: 230 --------------------------W-----------STLIKGYVDSGELNRAKQLF-E 251
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
L KN VSW LI + +M +G E+T +A+L + S G+L
Sbjct: 252 LMPEKNVVSWTTLINGFSQTGDYETAIST--YFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
G +HG++L +G KL +G L+ MYAK G + A VF + D++S +M+ G+
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPK 419
A HG +A+ F+QM+ G +P+++ FL++LTAC ++ +D G +F MR + +EP
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
+ HY +VDLLGRAG L+ A +E M I P W AL A HK +Q +
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLL 489
Query: 480 ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSND 539
ELDP G+++ L +AS G ++ R ++ ++ S++E++ ++ F + D
Sbjct: 490 ELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGD 549
Query: 540 IAHPQKDKI-IKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALL 598
+H +I +K+ E ++ I++ GY P + +++ EKE HSEKLAL L
Sbjct: 550 YSHKLTQEIGLKLDEIISLAIQK-GYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFL 608
Query: 599 NTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
T+PG+TIRI+KN+R+CGDCHS MKYV+ I +R+I++RD +FHHF DG CSCGDYW
Sbjct: 609 RTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 24/201 (11%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
+++++G ++P+ +L C+K G L G +H + L + ++ D I +++ MY
Sbjct: 282 FEMLEKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGYIL--DNGIKLDRAIGTALVDMY 338
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
A+CG+L+ A VF M +KD ++WT+MI G+A + R A+ F M+ SG +P+E
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMY--SGEKPDEVV 396
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL----------VDMYARCGFLG 232
+++ C L S D F D++ + ++ VD+ R G L
Sbjct: 397 FLAVLTAC-LNSSEVD--------LGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 233 EAQAVFDELGRWKNEVSWNAL 253
EA + + + + +W AL
Sbjct: 448 EAHELVENMPINPDLTTWAAL 468
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 145/366 (39%), Gaps = 33/366 (9%)
Query: 158 RAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFV 217
++ A + FP + P+E SL+ C S R VH + G + V
Sbjct: 11 KSSPAKIYFP----ADRQASPDESHFISLIHACKDTASL---RHVHAQILRRGVLSSR-V 62
Query: 218 GSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQR 277
+ LV + + ++F +N NALI F M R
Sbjct: 63 AAQLVSCSSLLKSPDYSLSIFRN-SEERNPFVLNALIRGLTENARFESSVRH--FILMLR 119
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
G T+ +L S S +G G+ LH LK+ +V +L+ MYAK+G +
Sbjct: 120 LGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKH 179
Query: 338 ARKVF----DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
A +VF DR+ K ++ N ++ GY + A LF+ M E N ++ +L+
Sbjct: 180 AFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSM----PERNSGSWSTLIK 235
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEP 450
+G L+ ++ F+LM E V + +++ + G + A+S ML ++P
Sbjct: 236 GYVDSGELNRAKQLFELM----PEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKP 291
Query: 451 T----AAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAA 506
AA+ A + + I + Y +LD A L ++YA G AA
Sbjct: 292 NEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA---LVDMYAKCGELDCAA 348
Query: 507 NIRKMM 512
+ M
Sbjct: 349 TVFSNM 354
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 326/594 (54%), Gaps = 28/594 (4%)
Query: 75 RALYQRLLKTCTKLGKLREGRLVHSHFL----LQNPDVRDDLVIQNSVLFMYARCGDLEH 130
R + +++ C ++++ + SHFL Q+ +R L+ + ++ + GDL
Sbjct: 3 RVYMETMIQKCVSFSQIKQ---LQSHFLTAGHFQSSFLRSRLLERCAI----SPFGDLSF 55
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS----RPNEFTLSSL 186
A Q+F +P T W ++I G+A + A + ML+ S S R + T S
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+K C Q+H + G + + ++L+D Y++ G L A +FDE+ ++
Sbjct: 116 LKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP-VRD 174
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
SWNALI L+ +M+ EG +E T A L + S +G +++G+ +
Sbjct: 175 VASWNALIAGLVSGNRASEAME--LYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENI 232
Query: 307 -HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-KVDVVSCNSMLIGYAQHG 364
HG+ S ++ V N + MY+K G + A +VF++ K VV+ N+M+ G+A HG
Sbjct: 233 FHGY---SNDNVI--VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHG 287
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
A+ +F ++ +GI+P+D+++L+ LTAC HAGL++ G F M GVE + HY
Sbjct: 288 EAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYG 347
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VDLL RAG L A I M + P +W +LLGAS ++ +EM A++++ E+
Sbjct: 348 CVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN 407
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQ 544
G VLL+N+YA+ GRWK+ +R M+ +KK P S++E + ++H F ++D +H Q
Sbjct: 408 NDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQ 467
Query: 545 KDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALL---NTS 601
+I + +++ +I+E GYV T VL + + EKE L YHSEKLA+A+ L+
Sbjct: 468 WREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGAD 527
Query: 602 PGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
S +R++ N+R+CGDCH K+++ I KREIIVRD RFH F DG CSC D+W
Sbjct: 528 EESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 281/503 (55%), Gaps = 6/503 (1%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
+ L + + + +V PD ++ C+ LG G+ VH+ L + P ++ I+++
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE-LFKRP-IQSTSTIESA 413
Query: 118 VLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+L +Y++CG A VF M KD V W S+I+G +N + +AL +F DM +
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
P+ ++S+ C + + G QVHG K G NVFVGSSL+D+Y++CG A V
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
F + +N V+WN++I LF M +G + +++L + SS
Sbjct: 534 FTSMST-ENMVAWNSMISCYSRNNLPELSID--LFNLMLSQGIFPDSVSITSVLVAISST 590
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
SL +GK LHG+ L+ G ++ N L+ MY K G A +F ++ +++ N M+
Sbjct: 591 ASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMI 650
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGV 416
GY HG A+ LF +M + G P+D+TFLSL++AC+H+G ++EG+ F+ M+Q +G+
Sbjct: 651 YGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI 710
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
EP + HYA +VDLLGRAGLL+ A SFI+ M IE ++IW LL AS H +E+G +A+
Sbjct: 711 EPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAE 770
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFV 536
K+ ++P +V L N+Y AG EAA + +MK+ GL K+P CSW+E+ + +VF
Sbjct: 771 KLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFF 830
Query: 537 SNDIAHPQKDKIIKMWEKLNQEI 559
S + P K +I + +L +
Sbjct: 831 SGGSSSPMKAEIFNVLNRLKSNM 853
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 181/391 (46%), Gaps = 16/391 (4%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ LLK C+ L L G+ +H ++ R D I S++ MY +CG L++A QVFD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLG--WRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 138 -------MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+ +D W SMI GY + R + + F ML G RP+ F+LS +V
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV--FGVRPDAFSLSIVVSVM 178
Query: 191 GLIPSY--GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
++ +G+Q+HG ++ + F+ ++L+DMY + G +A VF E+ N V
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
WN +I + AK T FT + CS S G+ +H
Sbjct: 239 LWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGF--GRQIHC 296
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
++K G YV +LL MY+K G + +A VF +V + N+M+ YA++ +G
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
A+ LF M + + P+ T ++++ CS GL + G+ + + ++ + + ++
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
L + G A + M E WG+L+
Sbjct: 417 LYSKCGCDPDAYLVFKSME-EKDMVAWGSLI 446
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 19/326 (5%)
Query: 175 GSRP---NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
GS P + FT SL+K C + + G+ +HG G+ + F+ +SLV+MY +CGFL
Sbjct: 52 GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFL 111
Query: 232 GEAQAVFDELGRWKNEVS------WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
A VFD + ++ VS WN++I F +M G F
Sbjct: 112 DYAVQVFDGWSQSQSGVSARDVTVWNSMI--DGYFKFRRFKEGVGCFRRMLVFGVRPDAF 169
Query: 286 TYSALLCSASSVGSL--EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
+ S ++ G+ E+GK +HG ML++ ++ L+ MY K G DA +VF
Sbjct: 170 SLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFV 229
Query: 344 RLV-KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+ K +VV N M++G+ G + ++ L+ + ++ +F L ACS +
Sbjct: 230 EIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG 289
Query: 403 EGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA- 461
G + + + G+ ++ + + G++ A + + +++ IW A++ A
Sbjct: 290 FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET-VFSCVVDKRLEIWNAMVAAY 348
Query: 462 ---SWMHKKIEMGAYAAQKVFELDPF 484
+ + +++ + QK D F
Sbjct: 349 AENDYGYSALDLFGFMRQKSVLPDSF 374
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 283/523 (54%), Gaps = 18/523 (3%)
Query: 61 HVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLF 120
H+ +++ G P+ ++ LK C+ L + G +H L ++ + + S+
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHG--LCIKSELAGNAIAGCSLCD 313
Query: 121 MYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
MYARCG L AR+VFD++ DT +W +I G A N A +A+ +F M SG P+
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQM--RSSGFIPDA 371
Query: 181 FTLSSLVKCCGLIP-SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
+L SL+ C P + G Q+H K GF ++ V +SL+ MY C L +F+
Sbjct: 372 ISLRSLL-CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
+ + VSWN ++ LF M T LL + S
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLR--LFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
L+ G +H + LK+G ++ N L+ MYAK GS+ AR++FD + DVVS +++++G
Sbjct: 489 LKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVG 548
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEP 418
YAQ GFG+EA++LFK+M GIEPN +TF+ +LTACSH GL++EG + + M+ + G+ P
Sbjct: 549 YAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISP 608
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV 478
H + +VDLL RAG L+ A FI+ M +EP +W LL A + + AA+ +
Sbjct: 609 TKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENI 668
Query: 479 FELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
++DPF S AHVLL +++AS+G W+ AA +R MK +KK P SW+EIE+ +H+F +
Sbjct: 669 LKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAE 728
Query: 539 DIAHPQKDKII----KMWEKLNQEIKEIGYVPDTRHVLLFVDQ 577
DI HP++D I +W ++ E P + L F+ +
Sbjct: 729 DIFHPERDDIYTVLHNIWSQMLDECN-----PQHKKRLQFIHE 766
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 195/397 (49%), Gaps = 13/397 (3%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y L+ C+ L +GR +H H L N + + D ++ N +L MY +CG L AR+VFD
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHIL--NSNCKYDTILNNHILSMYGKCGSLRDAREVFDF 127
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP ++ V++TS+ITGY+QN + +A+ L+ ML+ P++F S++K C G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ--EDLVPDQFAFGSIIKACASSSDVG 185
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G+Q+H K ++ ++L+ MY R + +A VF + K+ +SW+++I
Sbjct: 186 LGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP-MKDLISWSSII--- 241
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGV---TEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
L + +GV E+ + + L + SS+ + G +HG +KS
Sbjct: 242 -AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
G +L MYA+ G ++ AR+VFD++ + D S N ++ G A +G+ EAV +F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
QM G P+ I+ SLL A + L +G + + ++G ++ ++ +
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 435 LLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK-IEM 470
L + E + W +L A H++ +EM
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEM 457
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 79/121 (65%)
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
TY +L+C+ SS SL QG+ +H H+L S K + N +L MY K GS+ DAR+VFD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE 405
+ ++VS S++ GY+Q+G G EA+ L+ +ML++ + P+ F S++ AC+ + + G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 406 R 406
+
Sbjct: 189 Q 189
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/508 (34%), Positives = 287/508 (56%), Gaps = 13/508 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
+++ +G P+ +LK+C + L G LVH ++ + L + N+++ MYA
Sbjct: 101 EMVKQG-TSPNEFTLSSVLKSCRNMKVLAYGALVHG--VVVKLGMEGSLYVDNAMMNMYA 157
Query: 124 RCG-DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
C +E A +F ++ K+ VTWT++ITG+ + L ++ ML + P T
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
++ V+ I S G+Q+H K GF N+ V +S++D+Y RCG+L EA+ F E+
Sbjct: 218 IA--VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME 275
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
K+ ++WN LI +F + + +G+ +T+++L+ + +++ +L
Sbjct: 276 D-KDLITWNTLISELERSDSSEALL---MFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-KVDVVSCNSMLIGYA 361
G+ LHG + + G + N L+ MYAK G+I D+++VF +V + ++VS SM+IGY
Sbjct: 332 GQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Query: 362 QHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKV 420
HG+G EAV LF +M+ GI P+ I F+++L+AC HAGL+++G +YF +M ++G+ P
Sbjct: 392 SHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDR 451
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEM-GAYAAQKVF 479
Y +VDLLGRAG + A +E M +P + WGA+LGA HK + AA+KV
Sbjct: 452 DIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVM 511
Query: 480 ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSND 539
EL P G +V+L+ IYA+ G+W + A +RKMM+ G KKE SW+ +EN V F +D
Sbjct: 512 ELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSD 571
Query: 540 IAHPQKDKIIKMWEKLNQEIKEIGYVPD 567
P + + L +E +E GYVP+
Sbjct: 572 KMCPNASSVYSVLGLLIEETREAGYVPE 599
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 169/322 (52%), Gaps = 5/322 (1%)
Query: 113 VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
++ +++ Y G +E AR +FDEMP++D V WT+MITGYA + A F +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK- 104
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
G+ PNEFTLSS++K C + G VHG K G +++V +++++MYA C
Sbjct: 105 -QGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
EA + + KN+V+W LI ++ +M E VT + + +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLI--TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVS 352
+++S+ S+ GK +H ++K G + V N++L +Y + G +S+A+ F + D+++
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 353 CNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR 412
N+ LI + EA+++F++ G PN TF SL+ AC++ L+ G++ +
Sbjct: 282 WNT-LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 413 QFGVEPKVSHYAKIVDLLGRAG 434
+ G V ++D+ + G
Sbjct: 341 RRGFNKNVELANALIDMYAKCG 362
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/505 (36%), Positives = 277/505 (54%), Gaps = 12/505 (2%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D A +L C +++H+ +L D ++ + N ++ Y +CG R
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYD--KEISVGNKLITSYFKCGCSVSGRG 211
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
VFD M +++ +T T++I+G +NE D L LF M RG PN T S + C
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLV--HPNSVTYLSALAACSGS 269
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
+G+Q+H WK+G + + S+L+DMY++CG + +A +F+ +EVS +
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTE-VDEVSMTVI 328
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
+ F +M + G + SA+L + SL GK LH ++K
Sbjct: 329 LVGLAQNGSEEEAIQ--FFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK- 385
Query: 314 GRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
RK G +V N L++MY+K G ++D++ VF R+ K + VS NSM+ +A+HG G A+
Sbjct: 386 -RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALK 444
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF-GVEPKVSHYAKIVDLL 430
L+++M ++P D+TFLSLL ACSH GL+D+G M++ G+EP+ HY I+D+L
Sbjct: 445 LYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDML 504
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHV 490
GRAGLL A SFI+ + ++P IW ALLGA H E+G YAA+++F+ P S AH+
Sbjct: 505 GRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHI 564
Query: 491 LLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIK 550
L+ANIY+S G+WKE A K MK G+ KE S +EIE+ H FV D HPQ + I
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 551 MWEKLNQEIKEIGYVPDTRHVLLFV 575
+ L + + GY PD R +L +
Sbjct: 625 VLSGLFPVMVDEGYRPDKRFILCYT 649
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
GL + L+ RG V P+ Y L C+ ++ EG+ +H+ LL + +L I++++
Sbjct: 240 GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHA--LLWKYGIESELCIESAL 297
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ MY++CG +E A +F+ D V+ T ++ G AQN +A+ F ML+ G
Sbjct: 298 MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
N +S+++ + S G G+Q+H K F N FV + L++MY++CG L ++Q VF
Sbjct: 358 N--VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
+ + +N VSWN++I L+ +M T+ T+ +LL + S VG
Sbjct: 416 RRMPK-RNYVSWNSMI--AAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNT-----LLHMYAKSGSISDARKVFDRL-VKVDVVS 352
+++G+ L M +++ G T ++ M ++G + +A+ D L +K D
Sbjct: 473 LIDKGRELLNEM----KEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKI 528
Query: 353 CNSMLIGYAQHG 364
++L + HG
Sbjct: 529 WQALLGACSFHG 540
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 17/312 (5%)
Query: 81 LLKTCTKLGKLRE-GRLVHSHFLLQNPDV---------RDDLVIQNSVLFMYARCGDLEH 130
LL C + G G +H+ +++NP+ R+ LV+ NS+L +YA+CG L
Sbjct: 50 LLSICGREGWFPHLGPCLHAS-IIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVD 108
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A ++FDEMP +D ++ + G+ +N VL ML GSG + TL+ ++ C
Sbjct: 109 AIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML--GSGGF-DHATLTIVLSVC 165
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ +H G+ + VG+ L+ Y +CG + VFD + +N ++
Sbjct: 166 DTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH-RNVITL 224
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
A+I LF+ M+R TY + L + S + +G+ +H +
Sbjct: 225 TAVI--SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALL 282
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
K G + + + L+ MY+K GSI DA +F+ +VD VS +L+G AQ+G +EA+
Sbjct: 283 WKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAI 342
Query: 371 VLFKQMLRDGIE 382
F +ML+ G+E
Sbjct: 343 QFFIRMLQAGVE 354
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 302/589 (51%), Gaps = 51/589 (8%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R + ++ + +L C + R G V H + + ++ +Q++++ MYA+C +
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVG--VQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+E AR + + M D V+W SMI G + +AL +F M + ++FT+ S++
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE--RDMKIDDFTIPSIL 335
Query: 188 KCCGLIPSYGD-GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
C L + H K G+ V ++LVDMYA+ G + A VF+ + K+
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIE-KD 394
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
+SW AL+ LF M+ G + +++L +++ + LE G+ +
Sbjct: 395 VISWTALVTGNTHNGSYDEALK--LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQV 452
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
HG+ +KSG V N+L+ MY K GS+ DA +F+ + D+++ +++GYA++
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN--- 509
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAK 425
GLL++ +RYF MR +G+ P HYA
Sbjct: 510 --------------------------------GLLEDAQRYFDSMRTVYGITPGPEHYAC 537
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
++DL GR+G + + M +EP A +W A+L AS H IE G AA+ + EL+P
Sbjct: 538 MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNN 597
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQK 545
+ +V L+N+Y++AGR EAAN+R++MK + KEP CSWVE + VH F+S D HP+
Sbjct: 598 AVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRM 657
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGST 605
+I +++ IKE GY D L +D+ KEL L YHSEKLA+AF LL G+
Sbjct: 658 VEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAP 717
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDY 654
IRI+KN+RVCGDCHSAMK L+V I + FC C+ Y
Sbjct: 718 IRIIKNLRVCGDCHSAMK---LLVTFAI----EGKLGKFCISVCNNESY 759
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 194/381 (50%), Gaps = 9/381 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
++P+ +L+ CT L L G +H H + D+ D+ + N +L MYA+C +
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL--DVNVVNGLLAMYAQCKRIS 177
Query: 130 HARQVFDEMP-NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A +F+ M K+ VTWTSM+TGY+QN A A+ F D+ R G++ N++T S++
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRR--EGNQSNQYTFPSVLT 235
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C + + G QVH C K GF N++V S+L+DMYA+C + A+A+ + + + V
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM-EVDDVV 294
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL-CSASSVGSLEQGKWLH 307
SWN++I +F +M + +FT ++L C A S ++ H
Sbjct: 295 SWNSMI--VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
++K+G V N L+ MYAK G + A KVF+ +++ DV+S +++ G +G
Sbjct: 353 CLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYD 412
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
EA+ LF M GI P+ I S+L+A + LL+ G++ + G +S +V
Sbjct: 413 EALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLV 472
Query: 428 DLLGRAGLLDRAMSFIEGMLI 448
+ + G L+ A M I
Sbjct: 473 TMYTKCGSLEDANVIFNSMEI 493
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 194/375 (51%), Gaps = 10/375 (2%)
Query: 88 LGKL-REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTW 146
LG L + GR+ + + RD+ N+++ Y+ L A ++F P K+T++W
Sbjct: 35 LGDLSKSGRVDEARQMFDKMPERDEFT-WNTMIVAYSNSRRLSDAEKLFRSNPVKNTISW 93
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCC 206
++I+GY ++ V+A LF +M G +PNE+TL S+++ C + G Q+HG
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEM--QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 207 WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXX 266
K GF +V V + L+ MYA+C + EA+ +F+ + KN V+W +++
Sbjct: 152 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKA 211
Query: 267 XXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLL 326
F ++REG ++T+ ++L + +SV + G +H ++KSG K YV + L+
Sbjct: 212 IE--CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 327 HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
MYAK + AR + + + DVVS NSM++G + G EA+ +F +M ++ +D
Sbjct: 270 DMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 387 TFLSLLT--ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
T S+L A S + + +++ K+ + A +VD+ + G++D A+ E
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA-LVDMYAKRGIMDSALKVFE 388
Query: 445 GMLIEPTAAIWGALL 459
GM IE W AL+
Sbjct: 389 GM-IEKDVISWTALV 402
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 273/455 (60%), Gaps = 6/455 (1%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
+ + N+++ MY++C L A ++FD +++++TW++M+TGY+QN +++A+ LF M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF- 314
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
+G +P+E+T+ ++ C I +G+Q+H K GF ++F ++LVDMYA+ G L
Sbjct: 315 -SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+A+ FD L + ++ W +LI L+ +M+ G + T +++L
Sbjct: 374 ADARKGFDCL-QERDVALWTSLISGYVQNSDNEEALI--LYRRMKTAGIIPNDPTMASVL 430
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
+ SS+ +LE GK +HGH +K G L +G+ L MY+K GS+ D VF R DVV
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
S N+M+ G + +G G EA+ LF++ML +G+EP+D+TF+++++ACSH G ++ G YF +M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 412 R-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEM 470
Q G++PKV HYA +VDLL RAG L A FIE I+ +W LL A H K E+
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610
Query: 471 GAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIEN 530
G YA +K+ L S +V L+ IY + GR ++ + K M+ +G+ KE CSW+E++N
Sbjct: 611 GVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN 670
Query: 531 SVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYV 565
HVFV D HP ++ + +++++ E G+V
Sbjct: 671 QYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV 705
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 195/390 (50%), Gaps = 22/390 (5%)
Query: 81 LLKTCTKLGKLRE---GRLVHSHFLLQNPDVRDDLVIQ--NSVLFMYARCGDLEHARQVF 135
LLK T + R GR VH + IQ N ++ YA+CG L A +F
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGAST----CIQHANVLVNFYAKCGKLAKAHSIF 72
Query: 136 DEMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+ + KD V+W S+ITGY+QN + + LF +M PN +TL+ + K
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMR--AQDILPNAYTLAGIFKAESS 130
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ S GRQ H K +++V +SLV MY + G + + VF + +N +W+
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE-RNTYTWST 189
Query: 253 LIXXXXXX-XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
++ LF + + EG +++ ++A+L S ++ + G+ +H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 312 KSGRKLVGYVG--NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
K+G L+G+V N L+ MY+K S+++A K+FD + ++ ++M+ GY+Q+G EA
Sbjct: 249 KNG--LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
V LF +M GI+P++ T + +L ACS L+EG++ + + G E + +VD+
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+AG L A + L E A+W +L+
Sbjct: 367 YAKAGCLADARKGFD-CLQERDVALWTSLI 395
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 181/368 (49%), Gaps = 17/368 (4%)
Query: 60 LHVLDLIDR---GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
L + L R ++P +L C+ + L EG+ +HS FLL+ R L
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS-FLLKLGFER-HLFATT 361
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ MYA+ G L AR+ FD + +D WTS+I+GY QN +AL+L+ M +G
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT--AGI 419
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
PN+ T++S++K C + + G+QVHG KHGF V +GS+L MY++CG L +
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
VF K+ VSWNA+I LF +M EG + T+ ++ + S
Sbjct: 480 VFRRTPN-KDVVSWNAMI--SGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH 536
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGN--TLLHMYAKSGSISDARKVFDRLVKVDVVSC- 353
G +E+G W + +M+ L V + ++ + +++G + +A++ F +D C
Sbjct: 537 KGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKE-FIESANIDHGLCL 594
Query: 354 -NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR 412
+L HG + V ++++ G + T++ L + G + + ER ++ MR
Sbjct: 595 WRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYVQLSGIYTALGRMRDVERVWKHMR 653
Query: 413 QFGVEPKV 420
GV +V
Sbjct: 654 ANGVSKEV 661
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 52 LLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDD 111
L RR KT + P+ +LK C+ L L G+ VH H + + +
Sbjct: 410 LYRRMKTA----------GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL--E 457
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
+ I +++ MY++CG LE VF PNKD V+W +MI+G + N + +AL LF +ML
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML- 516
Query: 172 GGSGSRPNEFTLSSLVKCC 190
G P++ T +++ C
Sbjct: 517 -AEGMEPDDVTFVNIISAC 534
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/615 (30%), Positives = 312/615 (50%), Gaps = 35/615 (5%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHF----LLQNPDVRDDLV---------------- 113
D LL +CT L GR +H L+Q V + L+
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 114 ----IQNSVLFM-----YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALV 164
Q++V F Y G ++ A ++F + K+T+T+ +++ G+ +N + AL
Sbjct: 344 EMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALK 403
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDM 224
LF DML+ G +F+L+S V CGL+ Q+HG C K G N + ++L+DM
Sbjct: 404 LFTDMLQ--RGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDM 461
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
RC + +A+ +FD+ + I + + + E
Sbjct: 462 CTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDE 521
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
+ + +L ++G E G +H + LK+G +GN+L+ MYAK DA K+F+
Sbjct: 522 VSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNT 581
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTAC--SHAGLLD 402
+ + DV+S NS++ Y G EA+ L+ +M I+P+ IT +++A + + L
Sbjct: 582 MREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLS 641
Query: 403 EGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
F M+ + +EP HY V +LG GLL+ A I M ++P ++ ALL +
Sbjct: 642 SCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDS 701
Query: 462 SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEP 521
+H + A+ + P ++L +NIY+++G W + IR+ M++ G +K P
Sbjct: 702 CRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHP 761
Query: 522 ACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKE 581
A SW+ EN +H F + D +HPQ+ I + E L E ++GY P+T +VL VD+ K+
Sbjct: 762 AKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKK 821
Query: 582 LNLQYHSEKLALAFALLNTSP-GSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNR 640
L +HS KLA+ + +L+++ G +R+MKN+ +CGDCH KY++++VKREI++RD++
Sbjct: 822 SFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSG 881
Query: 641 FHHFCDGFCSCGDYW 655
FHHF +G CSC D W
Sbjct: 882 FHHFVNGKCSCRDLW 896
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 170/358 (47%), Gaps = 46/358 (12%)
Query: 81 LLKTCTKLGKLREGRLVHSHFL-LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
LL+ + + + VH+ FL L+ R + N+++ Y + G A VF +
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTR----LGNALISTYLKLGFPREAILVFVSLS 141
Query: 140 NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
+ V++T++I+G+++ ++AL +F M + G +PNE+T +++ C + + G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGL-VQPNEYTFVAILTACVRVSRFSLG 200
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYAR--CGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
Q+HG K GF ++VFV +SL+ +Y + + +FDE+ + ++ SWN ++
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQ-RDVASWNTVV--S 257
Query: 258 XXXXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
LF +M R EG+GV FT S LL S + L +G+ LHG ++ G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 317 LVGYVGNTLLHMYAK-------------------------------SGSISDARKVFDRL 345
V N L+ Y+K G + A ++F +
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
+ + ++ N+++ G+ ++G G +A+ LF ML+ G+E D + S + AC GL+ E
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 162/375 (43%), Gaps = 48/375 (12%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY-----A 123
G V+P+ + +L C ++ + G + H L+ + + + NS++ +Y +
Sbjct: 175 GLVQPNEYTFVAILTACVRVSRFSLG--IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGS 232
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
C D+ ++FDE+P +D +W ++++ + ++ A LF +M R G + FTL
Sbjct: 233 SCDDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR-VEGFGVDSFTL 288
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR---------------- 227
S+L+ C GR++HG + G + V ++L+ Y++
Sbjct: 289 STLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMA 348
Query: 228 ---------------CGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
G + A +F + KN +++NAL+ LF
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTE-KNTITYNALM--AGFCRNGHGLKALKLF 405
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
M + G +T+F+ ++ + + V + + +HG +K G + LL M +
Sbjct: 406 TDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRC 465
Query: 333 GSISDARKVFDR-LVKVDVVSCNSMLI-GYAQHGFGKEAVVLFKQML-RDGIEPNDITFL 389
++DA ++FD+ +D + +I GYA++G +AV LF + L + ++++
Sbjct: 466 ERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLT 525
Query: 390 SLLTACSHAGLLDEG 404
+L C G + G
Sbjct: 526 LILAVCGTLGFREMG 540
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/505 (32%), Positives = 286/505 (56%), Gaps = 10/505 (1%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
++I G V PD + LL + +K L + +H + + + + D+ + ++++ Y
Sbjct: 330 EMISSG-VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS--ISLDIFLTSALIDAYF 386
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+C + A+ +F + + D V +T+MI+GY N +D+L +F +++ PNE TL
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK--VKISPNEITL 444
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
S++ G++ + GR++HG K GF + +G +++DMYA+CG + A +F+ L +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
++ VSWN++I +F +M G + SA L + +++ S G
Sbjct: 505 -RDIVSWNSMITRCAQSDNPSAAID--IFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K +HG M+K Y +TL+ MYAK G++ A VF + + ++VS NS++ H
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNH 621
Query: 364 GFGKEAVVLFKQML-RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVS 421
G K+++ LF +M+ + GI P+ ITFL ++++C H G +DEG R+F+ M + +G++P+
Sbjct: 622 GKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQE 681
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
HYA +VDL GRAG L A ++ M P A +WG LLGA +HK +E+ A+ K+ +L
Sbjct: 682 HYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741
Query: 482 DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIA 541
DP SG +VL++N +A+A W+ +R +MK+ ++K P SW+EI H+FVS D+
Sbjct: 742 DPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVN 801
Query: 542 HPQKDKIIKMWEKLNQEIKEIGYVP 566
HP+ I + L E++ GY+P
Sbjct: 802 HPESSHIYSLLNSLLGELRLEGYIP 826
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 148/318 (46%), Gaps = 9/318 (2%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD--EM 138
LL+ C+ LR+G+ VH+ FL+ N + D +L MYA CG ++F ++
Sbjct: 41 LLQACSNPNLLRQGKQVHA-FLIVN-SISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
W S+I+ + +N AL + ML G P+ T LVK C + ++
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKML--CFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
+ G N FV SSL+ Y G + +FD + + K+ V WN ++
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ-KDCVIWNVMLNGYA 215
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
F+ M+ + T+ +L +S ++ G LHG ++ SG
Sbjct: 216 KCGALDSVIKG--FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
G + N+LL MY+K G DA K+F + + D V+ N M+ GY Q G +E++ F +M+
Sbjct: 274 GSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS 333
Query: 379 DGIEPNDITFLSLLTACS 396
G+ P+ ITF SLL + S
Sbjct: 334 SGVLPDAITFSSLLPSVS 351
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 169/375 (45%), Gaps = 7/375 (1%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V PD + + L+K C L + + D + + +S++ Y G ++
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE--FVASSLIKAYLEYGKID 190
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
++FD + KD V W M+ GYA+ A+D+++ ++R S PN T ++
Sbjct: 191 VPSKLFDRVLQKDCVIWNVMLNGYAKCG-ALDSVIKGFSVMRMDQIS-PNAVTFDCVLSV 248
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C G Q+HG G + +SL+ MY++CG +A +F + R + V+
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR-ADTVT 307
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
WN +I F +M G T+S+LL S S +LE K +H +
Sbjct: 308 WNCMISGYVQSGLMEESLT--FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+++ L ++ + L+ Y K +S A+ +F + VDVV +M+ GY +G ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
+ +F+ +++ I PN+IT +S+L L G + + G + + + ++D+
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 430 LGRAGLLDRAMSFIE 444
+ G ++ A E
Sbjct: 486 YAKCGRMNLAYEIFE 500
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 4/280 (1%)
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
LS L++ C G+QVH + + + ++ MYA CG + +F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 243 RWKNEV-SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
++ + WN++I + KM G T+ L+ + ++ + +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALA--FYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA 361
+L + G +V ++L+ Y + G I K+FDR+++ D V N ML GYA
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 362 QHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVS 421
+ G + F M D I PN +TF +L+ C+ L+D G + L+ GV+ + S
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
++ + + G D A M+ W ++
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFR-MMSRADTVTWNCMISG 314
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 260/464 (56%), Gaps = 39/464 (8%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+++A VF + N + +T+MI G+ + R+ D + L+ M+ + P+ + ++S++
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIH--NSVLPDNYVITSVL 134
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG----- 242
K C L R++H K GF + VG ++++Y + G L A+ +FDE+
Sbjct: 135 KACDLKVC----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 243 -------------------------RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQR 277
+ K+ V W A+I LF +MQ
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALE--LFREMQM 248
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
E EFT +L + S +G+LE G+W+H + +L +VGN L++MY++ G I++
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
AR+VF + DV+S N+M+ G A HG EA+ F+ M+ G PN +T ++LL ACSH
Sbjct: 309 ARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 368
Query: 398 AGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWG 456
GLLD G F M R F VEP++ HY IVDLLGR G L+ A FIE + IEP + G
Sbjct: 369 GGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLG 428
Query: 457 ALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
LL A +H +E+G A+++FE + SG +VLL+N+YAS+G+WKE+ IR+ M+DSG
Sbjct: 429 TLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSG 488
Query: 517 LKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIK 560
++KEP CS +E++N +H F+ DIAHP K+ I + ++LN+ ++
Sbjct: 489 IEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 178/425 (41%), Gaps = 80/425 (18%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCT------------KLG---------KLRE 93
RS G+ + + +V PD + +LK C KLG K+ E
Sbjct: 107 RSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMME 166
Query: 94 -----GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G LV++ + RD V ++ Y+ CG ++ A ++F ++ KDTV WT+
Sbjct: 167 IYGKSGELVNAKKMFDEMPDRDH-VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTA 225
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK 208
MI G +N+ AL LF +M + NEFT ++ C + + GR W
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSA--NEFTAVCVLSACSDLGALELGR------WV 277
Query: 209 HGFCDNV------FVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXX 262
H F +N FVG++L++MY+RCG + EA+ VF + R K+ +S+N +I
Sbjct: 278 HSFVENQRMELSNFVGNALINMYSRCGDINEARRVF-RVMRDKDVISYNTMISGLAMHGA 336
Query: 263 XXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVG 322
F M G+ + T ALL + S HG +L G ++
Sbjct: 337 SVEAINE--FRDMVNRGFRPNQVTLVALLNACS-----------HGGLLDIGLEV----- 378
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
+ ++VF+ +++ C L+G G +EA + + IE
Sbjct: 379 ------------FNSMKRVFNVEPQIEHYGCIVDLLGRV--GRLEEAYRFIENI---PIE 421
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE-PKVSHYAKIVDLLGRAGLLDRAMS 441
P+ I +LL+AC G ++ GE+ + R F E P Y + +L +G +
Sbjct: 422 PDHIMLGTLLSACKIHGNMELGEKIAK--RLFESENPDSGTYVLLSNLYASSGKWKESTE 479
Query: 442 FIEGM 446
E M
Sbjct: 480 IRESM 484
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 273/494 (55%), Gaps = 10/494 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V PDR L+ CTKL R GR VH + + +DL + NS+L YA+ +
Sbjct: 159 VTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRG--FSNDLSLVNSLLNCYAKSRAFKE 216
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A +F + KD ++W+++I Y QN A +AL++F DM+ G+ PN T+ +++ C
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM--DDGTEPNVATVLCVLQAC 274
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
GR+ H + G V V ++LVDMY +C EA AVF + R K+ VSW
Sbjct: 275 AAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR-KDVVSW 333
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLEQGKWLHGH 309
ALI F+ M E + +L S S +G LEQ K H +
Sbjct: 334 VALISGFTLNGMAHRSIEE--FSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSY 391
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
++K G ++G +L+ +Y++ GS+ +A KVF+ + D V S++ GY HG G +A
Sbjct: 392 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKA 451
Query: 370 VVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIV 427
+ F M++ ++PN++TFLS+L+ACSHAGL+ EG R F+LM + + P + HYA +V
Sbjct: 452 LETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLV 511
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
DLLGR G LD A+ + M PT I G LLGA +H+ EM A+K+FEL+ ++G
Sbjct: 512 DLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAG 571
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
++L++N+Y G W+ +R +K G+KK A S +EI VH FV++D HP+K+
Sbjct: 572 YYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEP 631
Query: 548 IIKMWEKLNQEIKE 561
+ + ++L+ +KE
Sbjct: 632 VYGLLKELDLHMKE 645
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 200/404 (49%), Gaps = 13/404 (3%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R +PD LK C +L ++ G ++H F+ ++ + DL + +S+++MY +CG
Sbjct: 53 RDEEKPDNFTLPVALKACGELREVNYGEMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGR 111
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ A ++FDE+ D VTW+SM++G+ +N A+ F M+ S P+ TL +LV
Sbjct: 112 MIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVM-ASDVTPDRVTLITLV 170
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
C + + GR VHG + GF +++ + +SL++ YA+ EA +F + K+
Sbjct: 171 SACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE-KDV 229
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC---SASSVGSLEQGK 304
+SW+ +I +F M +G TE + +LC + ++ LEQG+
Sbjct: 230 ISWSTVI--ACYVQNGAAAEALLVFNDMMDDG---TEPNVATVLCVLQACAAAHDLEQGR 284
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
H ++ G + V L+ MY K S +A VF R+ + DVVS +++ G+ +G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 365 FGKEAVVLFKQM-LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
++ F M L + P+ I + +L +CS G L++ + + + ++G +
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
A +V+L R G L A G+ ++ T +W +L+ +H K
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDT-VVWTSLITGYGIHGK 447
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 155/302 (51%), Gaps = 9/302 (2%)
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
ARQ+F EM + W +++ ++ ++ + L F M R +P+ FTL +K C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR--DEEKPDNFTLPVALKAC 70
Query: 191 GLIPSYGDGRQVHGCCWKH-GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
G + G +HG K +++VGSSL+ MY +CG + EA +FDEL + + V+
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVT 129
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT--EFTYSALLCSASSVGSLEQGKWLH 307
W++++ F + VT T L+ + + + + G+ +H
Sbjct: 130 WSSMVSGFEKNGSPYQAVE---FFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G +++ G + N+LL+ YAKS + +A +F + + DV+S ++++ Y Q+G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
EA+++F M+ DG EPN T L +L AC+ A L++G + +L + G+E +V +V
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 428 DL 429
D+
Sbjct: 307 DM 308
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 283/502 (56%), Gaps = 11/502 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ D A LK CT + L +G+ VH L + DL +S++ MY++CG ++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHC--LSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
AR+VF +P V+ ++I GY+QN +A+VLF +ML G P+E T +++V+
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLT--RGVNPSEITFATIVEA 638
Query: 190 CGLIPSYGDGRQVHGCCWKHGFC-DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C S G Q HG K GF + ++G SL+ MY + EA A+F EL K+ V
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIV 698
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
W ++ + +M+ +G + T+ +L S + SL +G+ +H
Sbjct: 699 LWTGMMSGHSQNGFYEEALK--FYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK-VDVVSCNSMLIGYAQHGFGK 367
+ L NTL+ MYAK G + + +VFD + + +VVS NS++ GYA++G+ +
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKI 426
+A+ +F M + I P++ITFL +LTACSHAG + +G + F++M Q+G+E +V H A +
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACM 876
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLLGR G L A FIE ++P A +W +LLGA +H G +A+K+ EL+P S
Sbjct: 877 VDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNS 936
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKD 546
A+VLL+NIYAS G W++A +RK+M+D G+KK P SW+++E H+F + D +H +
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIG 996
Query: 547 KIIKMWEKLNQEIKEIGYV-PD 567
KI E L +K+ V PD
Sbjct: 997 KIEMFLEDLYDLMKDDAVVNPD 1018
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 181/340 (53%), Gaps = 8/340 (2%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
+ +V+ R+ +L + L G +VH+ + + ++ + +S++ MY++C
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI--KLGLASNIYVGSSLVSMYSKCEK 377
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+E A +VF+ + K+ V W +MI GYA N + + LF DM SG ++FT +SL+
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM--KSSGYNIDDFTFTSLL 435
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
C G Q H K N+FVG++LVDMYA+CG L +A+ +F+ + ++
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD-RDN 494
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
V+WN +I LF +M G ++ L + + V L QGK +H
Sbjct: 495 VTWNTIIGSYVQDENESEAFD--LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
+K G + G++L+ MY+K G I DARKVF L + VVS N+++ GY+Q+ +
Sbjct: 553 CLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-E 611
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
EAVVLF++ML G+ P++ITF +++ AC L G ++
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 185/369 (50%), Gaps = 7/369 (1%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V+P+ + L K G E LV +++ R D + +V+ Y R G L+
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFER--MRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR +F EM + D V W MI+G+ + A+ F +M + S + TL S++
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK--SSVKSTRSTLGSVLSAI 337
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
G++ + G VH K G N++VGSSLV MY++C + A VF+ L KN+V W
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE-KNDVFW 396
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
NA+I LF M+ GY + +FT+++LL + ++ LE G H +
Sbjct: 397 NAMIRGYAHNGESHKVME--LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSII 454
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+K +VGN L+ MYAK G++ DAR++F+R+ D V+ N+++ Y Q EA
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAF 514
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
LFK+M GI + S L AC+H L +G++ L + G++ + + ++D+
Sbjct: 515 DLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY 574
Query: 431 GRAGLLDRA 439
+ G++ A
Sbjct: 575 SKCGIIKDA 583
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 176/444 (39%), Gaps = 77/444 (17%)
Query: 69 GAVEPDR-ALYQRLLKTC---TKLGK---------------LREGRLVHSHFLLQNPDVR 109
G V P ++QRLL+ C KL K LR G+ VHS L+ D
Sbjct: 35 GHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSE 94
Query: 110 DDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM 169
L N+++ +YA+C + +A + FD + KD W SM++ Y+ + L F +
Sbjct: 95 GRL--GNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSL 151
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
+ PN+FT S ++ C + GRQ+H K G N + G +LVDMYA+C
Sbjct: 152 FE--NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 230 FLGEAQAVFDELGRW---KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
+ +A+ VF+ W N V W L +F +M+ EG+
Sbjct: 210 RISDARRVFE----WIVDPNTVCWTCLF--SGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
+ ++ NT Y + G + DAR +F +
Sbjct: 264 FVTVI-------------------------------NT----YIRLGKLKDARLLFGEMS 288
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
DVV+ N M+ G+ + G A+ F M + ++ T S+L+A LD G
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLV 348
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL------G 460
+ G+ + + +V + + ++ A E L E W A++ G
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA-LEEKNDVFWNAMIRGYAHNG 407
Query: 461 ASWMHKKIEMGAYAAQKVFELDPF 484
S HK +E+ + +D F
Sbjct: 408 ES--HKVMELFMDMKSSGYNIDDF 429
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 151/322 (46%), Gaps = 16/322 (4%)
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G+ VH G +G+++VD+YA+C + A+ FD L K+ +WN+++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSMLSMYS 136
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
F + +FT+S +L + + ++E G+ +H M+K G +
Sbjct: 137 SIGKPGKVLRS--FVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
Y G L+ MYAK ISDAR+VF+ +V + V + GY + G +EAV++F++M
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDR 438
+G P+ + F++++ G L + F M P V + ++ G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETV 310
Query: 439 AMSFIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL---DPFYSGAHVLL 492
A+ + M ++ T + G++L A + +++G + +L Y G+ L
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS--L 368
Query: 493 ANIYASAGRWKEAANIRKMMKD 514
++Y+ + + AA + + +++
Sbjct: 369 VSMYSKCEKMEAAAKVFEALEE 390
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 315/599 (52%), Gaps = 28/599 (4%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P+ +L +C + G+ VH L + + + N+V+ MY RC D A
Sbjct: 159 PNEFTLSSVLTSC----RYEPGKQVHG--LALKLGLHCSIYVANAVISMYGRCHDGAAAY 212
Query: 133 Q---VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG-SRPNEFTL-SSLV 187
+ VF+ + K+ VTW SMI + A+ +F M G G R + SSL
Sbjct: 213 EAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLY 272
Query: 188 KCCGLIPSYGDG--RQVHGCCWKHGFCDNVFVGSSLVDMYAR-CGFLGEAQAVFDELGRW 244
K L+P+ Q+H K G V ++L+ +Y+ + +F E+
Sbjct: 273 KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHC 332
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
++ V+WN +I LF ++++E +T+S++L + + + +
Sbjct: 333 RDIVAWNGIITAFAVYDPERAIH---LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHAL 389
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H ++K G + N+L+H YAK GS+ +VFD + DVVS NSML Y+ HG
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHY 423
+ +F++M I P+ TF++LL+ACSHAG ++EG R F+ M + P+++HY
Sbjct: 450 QVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL-D 482
A ++D+L RA A I+ M ++P A +W ALLG+ H +G AA K+ EL +
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAH 542
P S +++ ++NIY + G + EA K M+ ++KEP SW EI N VH F S
Sbjct: 567 PTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHR 626
Query: 543 PQKDKIIKMWEKLNQEIKEIGYVPDTRHV-LLFVDQHEKELNLQYHSEKLALAFALLNTS 601
P K+ + + ++L +KE+GYVP+ R D+ ++E NL +HSEKLALAFA++
Sbjct: 627 PDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGR 686
Query: 602 PGST-----IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
S I+IMKN R+C DCH+ MK + ++ +EI++RD+NRFHHF D CSC DYW
Sbjct: 687 KSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 240/507 (47%), Gaps = 40/507 (7%)
Query: 21 TLRRLWQTAISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVE-PDRALYQ 79
TLRR + + P K ++ R L+R S + L VE + Y
Sbjct: 12 TLRRFGSSVL-------PSALKREFVEGLRTLVR-SGDIRRAVSLFYSAPVELQSQQAYA 63
Query: 80 RLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
L + C + L +G +H H L ++++ N ++ MYA+CG++ +ARQVFD MP
Sbjct: 64 ALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP 123
Query: 140 NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
++ V+WT++ITGY Q + LF ML S PNEFTLSS++ C Y G
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSML---SHCFPNEFTLSSVLTSC----RYEPG 176
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARC---GFLGEAQAVFDELGRWKNEVSWNALIXX 256
+QVHG K G +++V ++++ MY RC EA VF+ + ++KN V+WN++I
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI-KFKNLVTWNSMI-- 233
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYG---VTEFTYSALLCSASSVGSLEQGK---WLHGHM 310
+F +M +G G T + L +S + E K LH
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLT 293
Query: 311 LKSGRKLVGYVGNTLLHMYAKS-GSISDARKVFDRLVKV-DVVSCNSMLIGYAQHGFGKE 368
+KSG V L+ +Y++ +D K+F + D+V+ N ++ +A + +
Sbjct: 294 VKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PER 352
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER---YFQLMRQFGVEPKVSHYAK 425
A+ LF Q+ ++ + P+ TF S+L AC AGL+ + Q+++ + V + +
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGGFLADTVLNNS- 409
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
++ + G LD M + M + W ++L A +H +++ QK+ +++P
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVDSILPVFQKM-DINP-D 466
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMM 512
S + L + + AGR +E I + M
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
+H+ + + + PD + +LK C L R +H+ + D V+ NS+
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVI--KGGFLADTVLNNSL 410
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ YA+CG L+ +VFD+M ++D V+W SM+ Y+ + + L +F M P
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM-----DINP 465
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCW-KHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
+ T +L+ C +G ++ + K + + ++DM +R EA+ V
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Query: 238 FDELGRWKNEVSWNALI 254
++ + V W AL+
Sbjct: 526 IKQMPMDPDAVVWIALL 542
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 268/480 (55%), Gaps = 13/480 (2%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L + D + +V+ D A +L C L L GR VH L++ + D + ++N++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK--LVEEKRLGDKIEVKNAL 259
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ MY +CG ++ AR VFD M +D +TWT MI GY ++ +AL L L G RP
Sbjct: 260 VNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR--LMQFEGVRP 317
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
N T++SLV CG DG+ +HG + ++ + +SL+ MYA+C + VF
Sbjct: 318 NAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVF 377
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
++ W+A+I LF +M+RE T ++LL + +++
Sbjct: 378 SGASKYHTG-PWSAIIAGCVQNELVSDALG--LFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV----DVVSCN 354
L Q +H ++ K+G L+H+Y+K G++ A K+F+ + + DVV
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQ 413
+++ GY HG G A+ +F +M+R G+ PN+ITF S L ACSH+GL++EG F+ M
Sbjct: 495 ALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEH 554
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
+ + +HY IVDLLGRAG LD A + I + EPT+ +WGALL A H+ +++G
Sbjct: 555 YKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEM 614
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI-ENSV 532
AA K+FEL+P +G +VLLANIYA+ GRWK+ +R MM++ GL+K+P S +EI NSV
Sbjct: 615 AANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSNSV 674
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 219/491 (44%), Gaps = 25/491 (5%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
YQ LL + + + +H H + R I +++ YA CG + +AR++F+E
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG---RVSGHILSTLSVTYALCGHITYARKLFEE 74
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP +++ +I Y + DA+ +F M+ G P+ +T + K G + S
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G VHG + F + +V ++L+ MY G + A+ VFD + + ++ +SWN +I
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM-KNRDVISWNTMI--S 191
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS--GR 315
+F M E + T ++L + LE G+ +H + + G
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
K+ V N L++MY K G + +AR VFDR+ + DV++ M+ GY + G + A+ L +
Sbjct: 252 KI--EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 376 MLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL 435
M +G+ PN +T SL++ C A +++G+ + V + ++ + +
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 436 LDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE--MGAYAAQKVFELDPFYSGAHVLLA 493
+D G T W A++ ++ + +G + + +++P + + LL
Sbjct: 370 VDLCFRVFSGASKYHTGP-WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKK--EPACSWVEI-------ENSVHVFVSNDIAHPQ 544
YA+ ++A NI + +G + A V + E++ +F N I
Sbjct: 429 -AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF--NGIQEKH 485
Query: 545 KDKIIKMWEKL 555
K K + +W L
Sbjct: 486 KSKDVVLWGAL 496
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/509 (33%), Positives = 272/509 (53%), Gaps = 41/509 (8%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV--IQNSVLFMYARCGDLEH 130
PD Y L K C L G ++ H L +R +LV + N+ + M+A CGD+E+
Sbjct: 154 PDHFTYPVLFKVCADLRLSSLGHMILGHVL----KLRLELVSHVHNASIHMFASCGDMEN 209
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFDE P +D V+W +I GY + A A+ ++ L G +P++ T+ LV C
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK--LMESEGVKPDDVTMIGLVSSC 267
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-----W- 244
++ G++ + ++G + + ++L+DM+++CG + EA+ +FD L + W
Sbjct: 268 SMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWT 327
Query: 245 ------------------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
K+ V WNA+I LF +MQ
Sbjct: 328 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA--LFQEMQTSNT 385
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
E T L + S +G+L+ G W+H ++ K L +G +L+ MYAK G+IS+A
Sbjct: 386 KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALS 445
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
VF + + ++ +++ G A HG A+ F +M+ GI P++ITF+ LL+AC H G+
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 401 LDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ G YF M+ +F + P++ HY+ +VDLLGRAGLL+ A +E M +E AA+WGALL
Sbjct: 506 IQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALL 565
Query: 460 GASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK 519
MH +E+G AA+K+ ELDP SG +VLL +Y A W++A R+MM + G++K
Sbjct: 566 FGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEK 625
Query: 520 EPACSWVEIENSVHVFVSNDIAHPQKDKI 548
P CS +E+ V F+ D + P+ +KI
Sbjct: 626 IPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 174/370 (47%), Gaps = 36/370 (9%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS-GSRPNEFTLSSL 186
L+++ ++ + N + +W I G++++E ++ +L+ MLR G SRP+ FT L
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
K C + G + G K V ++ + M+A CG + A+ VFDE ++
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-SPVRD 221
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
VSWN LI ++ M+ EG + T L+ S S +G L +GK
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIY--VYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF- 365
+ ++ ++G ++ + N L+ M++K G I +AR++FD L K +VS +M+ GYA+ G
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 366 ------------------------------GKEAVVLFKQMLRDGIEPNDITFLSLLTAC 395
G++A+ LF++M +P++IT + L+AC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 396 SHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIW 455
S G LD G + + ++ + V+ +VD+ + G + A+S G+ + +
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTY 458
Query: 456 GALLGASWMH 465
A++G +H
Sbjct: 459 TAIIGGLALH 468
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 193/411 (46%), Gaps = 53/411 (12%)
Query: 46 IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
+I+ + ++ ++V L++ V+PD L+ +C+ LG L G+ + + ++
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY--VKE 285
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYA----------- 154
+R + + N+++ M+++CGD+ AR++FD + + V+WT+MI+GYA
Sbjct: 286 NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKL 345
Query: 155 --------------------QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
Q +R DAL LF +M S ++P+E T+ + C +
Sbjct: 346 FDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM--QTSNTKPDEITMIHCLSACSQLG 403
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
+ G +H K+ NV +G+SLVDMYA+CG + EA +VF + + +N +++ A+I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI-QTRNSLTYTAII 462
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM---L 311
F +M G E T+ LL + G ++ G+ M
Sbjct: 463 GGLALHGDASTAISY--FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRF 520
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHG---FGK 367
+L Y + ++ + ++G + +A ++ + + ++ D ++L G HG G+
Sbjct: 521 NLNPQLKHY--SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGE 578
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTAC-SHAGLLDEGERYFQLMRQFGVE 417
+A K++L ++P+D LL A + ++ +R ++M + GVE
Sbjct: 579 KAA---KKLLE--LDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 277/551 (50%), Gaps = 72/551 (13%)
Query: 77 LYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD--------- 127
L LL+ C L++G+ +H H + R + ++ N ++ MY +CG
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFK-RPNTLLSNHLIGMYMKCGKPIDACKVFD 106
Query: 128 ----------------------LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
L AR VFD MP +D V+W +M+ GYAQ+ +AL
Sbjct: 107 QMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWF 166
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
+ + R SG + NEF+ + L+ C RQ HG GF NV + S++D Y
Sbjct: 167 YKEFRR--SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 226 ARCGFLGEAQAVFDELGR-----W-------------------------KNEVSWNALIX 255
A+CG + A+ FDE+ W KN VSW ALI
Sbjct: 225 AKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 256 XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR 315
LF KM G +FT+S+ LC+++S+ SL GK +HG+M+++
Sbjct: 285 GYVRQGSGNRALD--LFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNV 342
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLV--KVDVVSCNSMLIGYAQHGFGKEAVVLF 373
+ V ++L+ MY+KSGS+ + +VF R+ K D V N+M+ AQHG G +A+ +
Sbjct: 343 RPNAIVISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGR 432
M++ ++PN T + +L ACSH+GL++EG R+F+ M Q G+ P HYA ++DLLGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
AG M IE M EP IW A+LG +H E+G AA ++ +LDP S ++LL
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILL 521
Query: 493 ANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSND--IAHPQKDKIIK 550
++IYA G+W+ +R +MK + KE A SW+EIE V F +D AH +K++I
Sbjct: 522 SSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYF 581
Query: 551 MWEKLNQEIKE 561
+ L I+E
Sbjct: 582 ILHNLAAVIEE 592
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 270/500 (54%), Gaps = 8/500 (1%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R K GL + R D + LK C L +++ G+ +H+H +++ L +
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG--FVTTLCV 246
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
NS+ MY CG+++ +F+ M +D V+WTS+I Y + + V A+ F M S
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR--NS 304
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
PNE T +S+ C + G Q+H G D++ V +S++ MY+ CG L A
Sbjct: 305 QVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA 364
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
+F + R ++ +SW+ +I F+ M++ G T+F ++LL +
Sbjct: 365 SVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFK--YFSWMRQSGTKPTDFALASLLSVS 421
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCN 354
++ +E G+ +H L G + V ++L++MY+K GSI +A +F + D+VS
Sbjct: 422 GNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLT 481
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ- 413
+M+ GYA+HG KEA+ LF++ L+ G P+ +TF+S+LTAC+H+G LD G YF +M++
Sbjct: 482 AMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQET 541
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
+ + P HY +VDLL RAG L A I M + +W LL A IE G
Sbjct: 542 YNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRR 601
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
AA+++ ELDP + A V LANIY+S G +EAAN+RK MK G+ KEP S ++I++ V
Sbjct: 602 AAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVS 661
Query: 534 VFVSNDIAHPQKDKIIKMWE 553
FVS D HPQ + I + E
Sbjct: 662 AFVSGDRFHPQSEDIYNILE 681
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 180/370 (48%), Gaps = 7/370 (1%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
AV PD ++ +LK C + + G +H++ + + + + +S+L MY R G ++
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV--KTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+ +VF EMP ++ VTWT++ITG R + L F +M R S + +T + +K
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR--SEELSDTYTFAIALKA 218
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C + G+ +H GF + V +SL MY CG + + +F+ + ++ VS
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVS 277
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W +LI F KM+ E T++++ + +S+ L G+ LH +
Sbjct: 278 WTSLIVAYKRIGQEVKAVET--FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+L G V N+++ MY+ G++ A +F + D++S ++++ GY Q GFG+E
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
F M + G +P D SLL+ + +++ G + L FG+E + + ++++
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 430 LGRAGLLDRA 439
+ G + A
Sbjct: 456 YSKCGSIKEA 465
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 175/368 (47%), Gaps = 13/368 (3%)
Query: 102 LLQNPDVRDDLVIQNSVLFMY---------ARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
LLQ P + + I N V+ + G+L ARQVFD+MP+ D V+WTS+I
Sbjct: 21 LLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKR 80
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC 212
Y + +AL+LF M P+ LS ++K CG + G +H K
Sbjct: 81 YVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLL 140
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
+V+VGSSL+DMY R G + ++ VF E+ ++N V+W A+I F
Sbjct: 141 SSVYVGSSLLDMYKRVGKIDKSCRVFSEM-PFRNAVTWTAII--TGLVHAGRYKEGLTYF 197
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
++M R +T++ L + + + ++ GK +H H++ G V N+L MY +
Sbjct: 198 SEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC 257
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
G + D +F+ + + DVVS S+++ Y + G +AV F +M + PN+ TF S+
Sbjct: 258 GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMF 317
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA 452
+AC+ L GE+ + G+ +S ++ + G L A +GM
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 453 AIWGALLG 460
+ W ++G
Sbjct: 378 S-WSTIIG 384
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 277/503 (55%), Gaps = 17/503 (3%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
++PD+ Y + C KL ++ GR VHS + D+ I +S++ MYA+CG +
Sbjct: 127 GLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF--KVGLERDVHINHSLIMMYAKCGQVG 184
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+AR++FDE+ +DTV+W SMI+GY++ A DA+ LF M G P+E TL S++
Sbjct: 185 YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE--EGFEPDERTLVSMLGA 242
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C + GR + + F+GS L+ MY +CG L A+ VF+++ + K+ V+
Sbjct: 243 CSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK-KDRVA 301
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W A+I LF +M++ G T S +L + SVG+LE GK + H
Sbjct: 302 WTAMITVYSQNGKSSEAFK--LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+ + YV L+ MY K G + +A +VF+ + + + N+M+ YA G KEA
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEA 419
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVD 428
++LF +M + P+DITF+ +L+AC HAGL+ +G RYF M FG+ PK+ HY I+D
Sbjct: 420 LLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIID 476
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL-DPFYSG 487
LL RAG+LD A F+E +P + A+LGA K + + A + + E+ + +G
Sbjct: 477 LLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAG 536
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS-NDIAHPQKD 546
+V+ +N+ A W E+A +R +M+D G+ K P CSW+EIE + F++ +D ++
Sbjct: 537 NYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGRE 596
Query: 547 KIIKMWEKLNQEIK----EIGYV 565
+++ L +E+K E GY+
Sbjct: 597 DSGSLFDLLVEEMKRERYEFGYI 619
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 200/396 (50%), Gaps = 21/396 (5%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
RG +E D + LLK C + +LR+ + + LL + + + + +I +V GD
Sbjct: 33 RGDLERD---FLFLLKKCISVNQLRQ---IQAQMLLHSVE-KPNFLIPKAV-----ELGD 80
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQ--NERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
++ +F + ++ MI G N+ AL L+ M SG +P++FT +
Sbjct: 81 FNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEA-ALSLYRRM--KFSGLKPDKFTYNF 137
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
+ C + G GR VH +K G +V + SL+ MYA+CG +G A+ +FDE+ +
Sbjct: 138 VFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITE-R 196
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ VSWN++I LF KM+ EG+ E T ++L + S +G L G+
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMD--LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
L + L ++G+ L+ MY K G + AR+VF++++K D V+ +M+ Y+Q+G
Sbjct: 255 LEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGK 314
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAK 425
EA LF +M + G+ P+ T ++L+AC G L+ G++ + ++ +
Sbjct: 315 SSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATG 374
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+VD+ G+ G ++ A+ E M ++ A W A++ A
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVK-NEATWNAMITA 409
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
+K + + ++ EPD +L C+ LG LR GRL+ + + + +
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL--STFLG 271
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+ ++ MY +CGDL+ AR+VF++M KD V WT+MIT Y+QN ++ +A LF +M + +G
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK--TG 329
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
P+ TLS+++ CG + + G+Q+ + N++V + LVDMY +CG + EA
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL 389
Query: 236 AVFDELGRWKNEVSWNALI 254
VF+ + KNE +WNA+I
Sbjct: 390 RVFEAMP-VKNEATWNAMI 407
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/372 (40%), Positives = 230/372 (61%), Gaps = 4/372 (1%)
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
+ + LSS V+ CGL + G H K GF +V++GSSLV +Y G + A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
+E+ +N VSW A+I L++KM++ ++T++ALL + + G
Sbjct: 179 EEMPE-RNVVSWTAMISGFAQEWRVDICLK--LYSKMRKSTSDPNDYTFTALLSACTGSG 235
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
+L QG+ +H L G K ++ N+L+ MY K G + DA ++FD+ DVVS NSM+
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 359 GYAQHGFGKEAVVLFKQML-RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
GYAQHG +A+ LF+ M+ + G +P+ IT+L +L++C HAGL+ EG ++F LM + G++
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK 477
P+++HY+ +VDLLGR GLL A+ IE M ++P + IWG+LL + +H + G AA++
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Query: 478 VFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS 537
L+P + HV LAN+YAS G WKEAA +RK+MKD GLK P CSW+EI N V +F +
Sbjct: 416 RLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKA 475
Query: 538 NDIAHPQKDKII 549
D ++ + +I+
Sbjct: 476 EDGSNCRMLEIV 487
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L + + + +P+ + LL CT G L +GR VH L + ++ L I NS++
Sbjct: 206 LKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTL--HMGLKSYLHISNSLI 263
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
MY +CGDL+ A ++FD+ NKD V+W SMI GYAQ+ A+ A+ LF +++ SG++P+
Sbjct: 264 SMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELF-ELMMPKSGTKPD 322
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
T ++ C +GR+ +HG + S LVD+ R G L EA + +
Sbjct: 323 AITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIE 382
Query: 240 ELGRWKNEVSWNALI 254
+ N V W +L+
Sbjct: 383 NMPMKPNSVIWGSLL 397
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 130/256 (50%), Gaps = 7/256 (2%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
D+ + +S++ +Y G++E+A +VF+EMP ++ V+WT+MI+G+AQ R L L+ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
+ S S PN++T ++L+ C + G GR VH G + + +SL+ MY +CG
Sbjct: 214 K--STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFA-KMQREGYGVTEFTYSA 289
L +A +FD+ K+ VSWN++I LF M + G TY
Sbjct: 272 LKDAFRIFDQFSN-KDVVSWNSMI--AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLG 328
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKV 348
+L S G +++G+ M + G K + L+ + + G + +A ++ + + +K
Sbjct: 329 VLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 349 DVVSCNSMLIGYAQHG 364
+ V S+L HG
Sbjct: 389 NSVIWGSLLFSCRVHG 404
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 11/254 (4%)
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
+ ++R+G+ + S+ + S G H LK G Y+G++L+ +Y S
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
G + +A KVF+ + + +VVS +M+ G+AQ + L+ +M + +PND TF +LL
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA 452
+AC+ +G L +G G++ + ++ + + G L A +
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD-QFSNKDV 287
Query: 453 AIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH---VLLANIYAS---AGRWKEAA 506
W +++ H A A ++FEL SG + + +S AG KE
Sbjct: 288 VSWNSMIAGYAQHGL----AMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 507 NIRKMMKDSGLKKE 520
+M + GLK E
Sbjct: 344 KFFNLMAEHGLKPE 357
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/518 (32%), Positives = 286/518 (55%), Gaps = 13/518 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
D+I G + D ++ +L L G +H++ + D +L + N+++ MY+
Sbjct: 376 DMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD--SNLQVGNTLIDMYS 432
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+C + + F M +KD ++WT++I GYAQN+ V+AL LF D+ + +E L
Sbjct: 433 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK--KRMEIDEMIL 490
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
S+++ ++ S +++H + G D V + + LVD+Y +C +G A VF+ + +
Sbjct: 491 GSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESI-K 548
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
K+ VSW ++I LF +M G +L +A+S+ +L +G
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVE--LFRRMVETGLSADSVALLCILSAAASLSALNKG 606
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
+ +H ++L+ G L G + ++ MYA G + A+ VFDR+ + ++ SM+ Y H
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSH 422
G GK AV LF +M + + P+ I+FL+LL ACSHAGLLDEG + ++M ++ +EP H
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEH 726
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
Y +VD+LGRA + A F++ M EPTA +W ALL A H + E+G AAQ++ EL+
Sbjct: 727 YVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELE 786
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAH 542
P G VL++N++A GRW + +R MK SG++K P CSW+E++ VH F + D +H
Sbjct: 787 PKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSH 846
Query: 543 PQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEK 580
P+ +I +EKL++ +++ R + + EK
Sbjct: 847 PESKEI---YEKLSEVTRKLEREKGKRELAREFNAREK 881
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 163/359 (45%), Gaps = 6/359 (1%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ +L+ C K + +GR +HS P D + ++FMY +CG L+ A +VFDE
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
MP++ W +MI Y N AL L+ +M G + F +L+K C +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP--ALLKACAKLRDIR 199
Query: 198 DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXX 257
G ++H K G+ F+ ++LV MYA+ L A+ +FD + V WN+++
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL--S 257
Query: 258 XXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
LF +M G +T + L + + GK +H +LKS
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 318 VG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
YV N L+ MY + G + A ++ ++ DVV+ NS++ GY Q+ KEA+ F M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL 435
+ G + ++++ S++ A L G + + G + + ++D+ + L
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 189/377 (50%), Gaps = 17/377 (4%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P+ L C + G+ +H+ +L++ +L + N+++ MY RCG + A
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHAS-VLKSSTHSSELYVCNALIAMYTRCGKMPQAE 340
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
++ +M N D VTW S+I GY QN +AL F DM+ +G + +E +++S++ G
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI--AAGHKSDEVSMTSIIAASGR 398
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG---FLGEAQAVFDELGRWKNEVS 249
+ + G ++H KHG+ N+ VG++L+DMY++C ++G A + K+ +S
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD----KDLIS 454
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W +I LF + ++ + E ++L ++S + S+ K +H H
Sbjct: 455 WTTVI--AGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCH 512
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+L+ G L + N L+ +Y K ++ A +VF+ + DVVS SM+ A +G EA
Sbjct: 513 ILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY--FQLMRQFGVEPKVSHYAKIV 427
V LF++M+ G+ + + L +L+A + L++G + L + F +E ++ +V
Sbjct: 572 VELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA--VAVV 629
Query: 428 DLLGRAGLLDRAMSFIE 444
D+ G L A + +
Sbjct: 630 DMYACCGDLQSAKAVFD 646
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 187/374 (50%), Gaps = 15/374 (4%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ LLK C KL +R G +HS LL I N+++ MYA+ DL AR++FD
Sbjct: 185 FPALLKACAKLRDIRSGSELHS--LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 138 MPNK-DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSY 196
K D V W S+++ Y+ + ++++ L LF +M +G PN +T+ S + C
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM--TGPAPNSYTIVSALTACDGFSYA 300
Query: 197 GDGRQVHGCCWKHG-FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIX 255
G+++H K ++V ++L+ MY RCG + +A+ + ++ + V+WN+LI
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN-ADVVTWNSLI- 358
Query: 256 XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR 315
F+ M G+ E + ++++ ++ + +L G LH +++K G
Sbjct: 359 -KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
VGNTL+ MY+K + F R+ D++S +++ GYAQ+ EA+ LF+
Sbjct: 418 DSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRD 477
Query: 376 MLRDGIEPNDITFLSLLTACS-HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRA- 433
+ + +E +++ S+L A S +L E + ++R+ ++ + + ++VD+ G+
Sbjct: 478 VAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQN--ELVDVYGKCR 535
Query: 434 --GLLDRAMSFIEG 445
G R I+G
Sbjct: 536 NMGYATRVFESIKG 549
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 285/513 (55%), Gaps = 14/513 (2%)
Query: 55 RSKTGLHVLDLIDR---GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDD 111
R K VL L D+ ++PD + + +K C L +G V + + ++D
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV--DFGYKND 150
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
+ + +SVL +Y +CG ++ A +F +M +D + WT+M+TG+AQ +++ A+ + +M
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G G + + L++ G + GR VHG ++ G NV V +SLVDMYA+ GF+
Sbjct: 211 EGFGR--DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
A VF + +K VSW +LI + +MQ G+ T +L
Sbjct: 269 EVASRVFSRM-MFKTAVSWGSLISGFAQNGLANKAFEAVV--EMQSLGFQPDLVTLVGVL 325
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT-LLHMYAKSGSISDARKVFDRLVKVDV 350
+ S VGSL+ G+ +H ++LK R ++ V T L+ MY+K G++S +R++F+ + + D+
Sbjct: 326 VACSQVGSLKTGRLVHCYILK--RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDL 383
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQL 410
V N+M+ Y HG G+E V LF +M IEP+ TF SLL+A SH+GL+++G+ +F +
Sbjct: 384 VCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSV 443
Query: 411 M-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
M ++ ++P HY ++DLL RAG ++ A+ I ++ IW ALL H+ +
Sbjct: 444 MINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLS 503
Query: 470 MGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
+G AA K+ +L+P G L++N +A+A +WKE A +RK+M++ ++K P S +E+
Sbjct: 504 VGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVN 563
Query: 530 NSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEI 562
+ F+ D++H + ++++ L EI+++
Sbjct: 564 GELRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 189/382 (49%), Gaps = 16/382 (4%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++ R + P R + L++ +KL R +H+ F++ ++ + I ++ R
Sbjct: 9 MLHRTLLCPKRI---KFLQSISKLK--RHITQIHA-FVISTGNLLNGSSISRDLIASCGR 62
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
G++ +AR+VFDE+P + + SMI Y++ + + L L+ M+ +P+ T +
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI--AEKIQPDSSTFT 120
Query: 185 SLVKCC--GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+K C GL+ G+ G+ ++VFV SS++++Y +CG + EA+ +F ++
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAV--DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA 178
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
+ ++ + W ++ + +MQ EG+G LL ++ +G +
Sbjct: 179 K-RDVICWTTMV--TGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
G+ +HG++ ++G + V +L+ MYAK G I A +VF R++ VS S++ G+AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
+G +A +M G +P+ +T + +L ACS G L G + + V +V+
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA 355
Query: 423 YAKIVDLLGRAGLLDRAMSFIE 444
A ++D+ + G L + E
Sbjct: 356 TA-LMDMYSKCGALSSSREIFE 376
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 183/605 (30%), Positives = 305/605 (50%), Gaps = 24/605 (3%)
Query: 50 RNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR 109
RNL R+K + + ++P+ Y +L C+ + L G+ +HS +
Sbjct: 302 RNL--RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI--KVGFE 357
Query: 110 DDLVIQNSVLFMYARCGDLE-HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
D + N+++ MY +C E A +VF M + + V+WT++I G + D L +
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M++ PN TLS +++ C + ++H + + VG+SLVD YA
Sbjct: 418 MVK--REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASS 475
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
+ A V + R N +++ +L+ + M +G + + +
Sbjct: 476 RKVDYAWNVIRSMKRRDN-ITYTSLVTRFNELGKHEMALSVINY--MYGDGIRMDQLSLP 532
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+ +++++G+LE GK LH + +KSG V N+L+ MY+K GS+ DA+KVF+ +
Sbjct: 533 GFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP 592
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
DVVS N ++ G A +GF A+ F++M EP+ +TFL LL+ACS+ L D G YF
Sbjct: 593 DVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF 652
Query: 409 QLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
Q+M++ + +EP+V HY +V +LGRAG L+ A +E M ++P A I+ LL A
Sbjct: 653 QVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN 712
Query: 468 IEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+ +G A K L P ++LLA++Y +G+ + A R +M + L K+ S VE
Sbjct: 713 LSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Query: 528 IENSVHVFVSNDIAHPQK-DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQY 586
++ VH FVS D+ K + I E + +EIK G + N +
Sbjct: 773 VQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG------------SPYRGNENASF 820
Query: 587 HSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCD 646
HS K A+ + + SP + + ++KN +C DCH + +T +V ++I VRD N+ H F +
Sbjct: 821 HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKN 880
Query: 647 GFCSC 651
G CSC
Sbjct: 881 GECSC 885
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 187/363 (51%), Gaps = 6/363 (1%)
Query: 97 VHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN 156
+H H + + ++L + N++L +Y + + +AR++FDEM ++ WT MI+ + ++
Sbjct: 43 LHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKS 102
Query: 157 ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVF 216
+ AL LF +M+ SG+ PNEFT SS+V+ C + G +VHG K GF N
Sbjct: 103 QEFASALSLFEEMM--ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 217 VGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ 276
VGSSL D+Y++CG EA +F L + + +SW +I +++M
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSL-QNADTISWTMMISSLVGARKWREALQ--FYSEMV 217
Query: 277 REGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSIS 336
+ G EFT+ LL ++S +G LE GK +H +++ G L + +L+ Y++ +
Sbjct: 218 KAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKME 276
Query: 337 DARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
DA +V + + DV S++ G+ ++ KEAV F +M G++PN+ T+ ++L+ CS
Sbjct: 277 DAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Query: 397 HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWG 456
LD G++ + G E +VD+ + + S + G ++ P W
Sbjct: 337 AVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWT 396
Query: 457 ALL 459
L+
Sbjct: 397 TLI 399
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 11/231 (4%)
Query: 176 SRPNEFTLSSLVKCCGLIPSYGD------GRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
SR NE L +L K C I S+ + G +H K G +N+ + ++L+ +Y +
Sbjct: 15 SRTNE--LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 72
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
+ A+ +FDE+ + +W +I LF +M G EFT+S+
Sbjct: 73 GIWNARKLFDEMSH-RTVFAWTVMISAFTKSQEFASALS--LFEEMMASGTHPNEFTFSS 129
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
++ S + + + G +HG ++K+G + VG++L +Y+K G +A ++F L D
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+S M+ +EA+ + +M++ G+ PN+ TF+ LL A S GL
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/445 (35%), Positives = 253/445 (56%), Gaps = 17/445 (3%)
Query: 85 CTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTV 144
C LGK G + S +L DL + +S+ +Y++CG LE + ++F +P KD
Sbjct: 465 CLNLGKQVHGYTLKSGLVL-------DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 145 TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHG 204
W SMI+G+ + +A+ LF +ML G+ P+E TL++++ C PS G+++HG
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEML--DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXX 264
+ G + +GS+LV+MY++CG L A+ V+D L + VS ++LI
Sbjct: 576 YTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL-DPVSCSSLISGYSQHGLIQ 634
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
LF M G+ + F S++L +A+ G +H ++ K G VG++
Sbjct: 635 DGFL--LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSS 692
Query: 325 LLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
LL MY+K GSI D K F ++ D+++ +++ YAQHG EA+ ++ M G +P+
Sbjct: 693 LLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752
Query: 385 DITFLSLLTACSHAGLLDEGERYFQL---MRQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
+TF+ +L+ACSH GL++E YF L ++ +G+EP+ HY +VD LGR+G L A S
Sbjct: 753 KVTFVGVLSACSHGGLVEES--YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAES 810
Query: 442 FIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGR 501
FI M I+P A +WG LL A +H ++E+G AA+K EL+P +GA++ L+NI A G
Sbjct: 811 FINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGE 870
Query: 502 WKEAANIRKMMKDSGLKKEPACSWV 526
W E RK+MK +G++KEP S V
Sbjct: 871 WDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 199/390 (51%), Gaps = 14/390 (3%)
Query: 53 LRRSKTGLHVLDLIDR---GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR 109
LR G V DL G +PD Y +L C L KLR G++V + + +
Sbjct: 227 LRNQNYG-AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-- 283
Query: 110 DDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM 169
D+ + +++ +YA+CG + A +VF +PN V+WT M++GY ++ A AL +F +M
Sbjct: 284 -DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
SG N T++S++ CG + QVH +K GF + V ++L+ MY++ G
Sbjct: 343 RH--SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSG 400
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
+ ++ VF++L + + N +I LF +M +EG EF+ +
Sbjct: 401 DIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIR--LFTRMLQEGLRTDEFSVCS 458
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
LL S + L GK +HG+ LKSG L VG++L +Y+K GS+ ++ K+F + D
Sbjct: 459 LL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKD 515
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
SM+ G+ ++G+ +EA+ LF +ML DG P++ T ++LT CS L G+
Sbjct: 516 NACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHG 575
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ G++ + + +V++ + G L A
Sbjct: 576 YTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 173/364 (47%), Gaps = 13/364 (3%)
Query: 86 TKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVT 145
++L LR +++ +H LL+ + D+ + S+L Y+ G + A ++FD +P D V+
Sbjct: 59 SRLCNLRTTKILQAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVS 117
Query: 146 WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
MI+GY Q+ ++L F M G NE + S++ C + + V C
Sbjct: 118 CNIMISGYKQHRLFEESLRFFSKM--HFLGFEANEISYGSVISACSALQAPLFSELV--C 173
Query: 206 C--WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF-DELGRWKNEVSWNALIXXXXXXXX 262
C K G+ V S+L+D++++ +A VF D L N WN +I
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS--ANVYCWNTIIAGALRNQN 231
Query: 263 XXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVG 322
LF +M +TYS++L + +S+ L GK + ++K G + V +V
Sbjct: 232 YGAVFD--LFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVC 288
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
++ +YAK G +++A +VF R+ VVS ML GY + A+ +FK+M G+E
Sbjct: 289 TAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVE 348
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
N+ T S+++AC ++ E + + + G S A ++ + ++G +D +
Sbjct: 349 INNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQV 408
Query: 443 IEGM 446
E +
Sbjct: 409 FEDL 412
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGY---VGNTLLHMYAKSGSISDARKVFDRLVKVD 349
S S + +L K L H+L+ R L+ + + +LL Y+ SGS++DA K+FD + + D
Sbjct: 57 SNSRLCNLRTTKILQAHLLR--RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPD 114
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS--HAGLLDE 403
VVSCN M+ GY QH +E++ F +M G E N+I++ S+++ACS A L E
Sbjct: 115 VVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE 170
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 181/590 (30%), Positives = 292/590 (49%), Gaps = 44/590 (7%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
V P+ + C+ L + +G VHS + DD+++ NS++ MY++CG L
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHS--IAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
E AR+VFD + NKD TW SMITGY Q A LF M + RPN T ++++
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM--QDANLRPNIITWNTMIS 461
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
G+ N G ++ D++ R G+ Q +N
Sbjct: 462 ---------------------GYIKNGDEGEAM-DLFQRMEKDGKVQ---------RNTA 490
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
+WN +I LF KMQ + T +LL + +++ + + +HG
Sbjct: 491 TWNLII--AGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHG 548
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+L+ + V N L YAKSG I +R +F + D+++ NS++ GY HG
Sbjct: 549 CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER-YFQLMRQFGVEPKVSHYAKIV 427
A+ LF QM GI PN T S++ A G +DEG++ ++ + + + P + H + +V
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
L GRA L+ A+ FI+ M I+ IW + L +H I+M +AA+ +F L+P +
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTA 728
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
+++ IYA + + K +D+ LKK SW+E+ N +H F + D + D
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDV 788
Query: 548 IIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGS--T 605
+ + EK+++ + D + L++++ +E HSEK A+AF L+++S S T
Sbjct: 789 LYPLVEKMSR----LDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTT 844
Query: 606 IRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
IRI+KN+R+C DCH KYV+ +I++ DT HHF +G CSC DYW
Sbjct: 845 IRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 227/516 (43%), Gaps = 60/516 (11%)
Query: 45 YIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHF-LL 103
Y+ + +LL K LD + + + R+ Y +LL++C G + GR++H+ F L
Sbjct: 55 YLCRNGSLLEAEK----ALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLF 110
Query: 104 QNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDAL 163
PDV ++ +L MYA+CG + AR+VFD M ++ TW++MI Y++ R +
Sbjct: 111 TEPDV----FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
LF M++ G P++F +++ C G+ +H K G + V +S++
Sbjct: 167 KLFRLMMK--DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 224 MYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+YA+CG L A F + R ++ ++WN+++ L +M++EG
Sbjct: 225 VYAKCGELDFATKFFRRM-RERDVIAWNSVL--LAYCQNGKHEEAVELVKEMEKEGISPG 281
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
T++ L+ + +G + L M G
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFG----------------------------- 312
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
+ DV + +M+ G +G +A+ +F++M G+ PN +T +S ++ACS ++++
Sbjct: 313 --ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 404 GERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG--- 460
G + + G V +VD+ + G L+ A + + W +++
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS-VKNKDVYTWNSMITGYC 429
Query: 461 -ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK 519
A + K E+ + + L P + +++ Y G EA ++ + M+ G +
Sbjct: 430 QAGYCGKAYEL--FTRMQDANLRPNIITWNTMISG-YIKNGDEGEAMDLFQRMEKDGKVQ 486
Query: 520 EPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKL 555
+W ++ ++ I + +KD+ ++++ K+
Sbjct: 487 RNTATW-------NLIIAGYIQNGKKDEALELFRKM 515
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 258/449 (57%), Gaps = 9/449 (2%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK 141
+K C LG L G L+H ++N +DD V S++ MYA+ G +E A++VFDE+P +
Sbjct: 116 IKACVGLGLLENGILIHG-LAMKNGLDKDDYVAP-SLVEMYAQLGTMESAQKVFDEIPVR 173
Query: 142 DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ 201
++V W ++ GY + + + LF L +G + TL LVK CG + + G+
Sbjct: 174 NSVLWGVLMKGYLKYSKDPEVFRLF--CLMRDTGLALDALTLICLVKACGNVFAGKVGKC 231
Query: 202 VHGCCWKHGFCDNV-FVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
VHG + F D ++ +S++DMY +C L A+ +F E +N V W LI
Sbjct: 232 VHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF-ETSVDRNVVMWTTLISGFAKC 290
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
LF +M RE + T +A+L S SS+GSL GK +HG+M+++G ++
Sbjct: 291 ERAVEAFD--LFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV 348
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
+ + MYA+ G+I AR VFD + + +V+S +SM+ + +G +EA+ F +M
Sbjct: 349 NFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ PN +TF+SLL+ACSH+G + EG + F+ M R +GV P+ HYA +VDLLGRAG + A
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASA 499
SFI+ M ++P A+ WGALL A +HK++++ A+K+ ++P S +VLL+NIYA A
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 500 GRWKEAANIRKMMKDSGLKKEPACSWVEI 528
G W+ +R+ M G +K S E+
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 220/501 (43%), Gaps = 58/501 (11%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP- 139
LL ++ L + VH+ ++ D++V+ +S+ Y + L+ A F+ +P
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHG--FEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPC 67
Query: 140 -NKDTVTWTSMITGYAQNERAV--DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSY 196
++ +W ++++GY++++ D L+L+ M R G + F L +K C +
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDG--VDSFNLVFAIKACVGLGLL 125
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
+G +HG K+G + +V SLV+MYA+ G + AQ VFDE+ +N V W L+
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPV-RNSVLWGVLM-- 182
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG-HMLKSGR 315
LF M+ G + T L+ + +V + + GK +HG + +S
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQ 375
Y+ +++ MY K + +ARK+F+ V +VV +++ G+A+ EA LF+Q
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 376 MLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL 435
MLR+ I PN T ++L +CS G L G+ M + G+E ++ +D+ R G
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 436 LDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANI 495
+ A + + M+ E W +++ N
Sbjct: 363 IQMARTVFD-MMPERNVISWSSMI----------------------------------NA 387
Query: 496 YASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKL 555
+ G ++EA + MK + + NSV FVS A + + W++
Sbjct: 388 FGINGLFEEALDCFHKMKSQNV----------VPNSV-TFVSLLSACSHSGNVKEGWKQF 436
Query: 556 NQEIKEIGYVPDTRHVLLFVD 576
++ G VP+ H VD
Sbjct: 437 ESMTRDYGVVPEEEHYACMVD 457
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R ++ P++ +L +C+ LG LR G+ VH ++++N + D V S + MYARCG+
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHG-YMIRN-GIEMDAVNFTSFIDMYARCGN 362
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
++ AR VFD MP ++ ++W+SMI + N +AL F M PN T SL+
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM--KSQNVVPNSVTFVSLL 420
Query: 188 KCCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
C + +G +Q +G + +VD+ R G +GEA++ D +
Sbjct: 421 SACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPM 480
Query: 247 EVSWNALI 254
+W AL+
Sbjct: 481 ASAWGALL 488
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 257/460 (55%), Gaps = 14/460 (3%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
PD + + K C K +REG+ +H ++ DD+ +QNS++ Y CG+ +A
Sbjct: 103 SPDMFTFPPVFKACGKFSGIREGKQIHG--IVTKMGFYDDIYVQNSLVHFYGVCGESRNA 160
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
+VF EMP +D V+WT +ITG+ + +AL F M PN T ++ G
Sbjct: 161 CKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM-----DVEPNLATYVCVLVSSG 215
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+ G+ +HG K ++ G++L+DMY +C L +A VF EL + K++VSWN
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK-KDKVSWN 274
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQ-REGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
++I LF+ MQ G +++L + +S+G+++ G+W+H ++
Sbjct: 275 SMISGLVHCERSKEAID--LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI 332
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
L +G K ++G ++ MYAK G I A ++F+ + +V + N++L G A HG G E++
Sbjct: 333 LTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESL 392
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM--RQFGVEPKVSHYAKIVD 428
F++M++ G +PN +TFL+ L AC H GL+DEG RYF M R++ + PK+ HY ++D
Sbjct: 393 RYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMID 452
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI-EMGAYAAQKVFELDPFYSG 487
LL RAGLLD A+ ++ M ++P I GA+L A + E+ +++ SG
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSG 512
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+VLL+NI+A+ RW + A IR++MK G+ K P S++E
Sbjct: 513 VYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 184/395 (46%), Gaps = 15/395 (3%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P++++ L+ C+ L R + + + + ++ +RDDL+I V F+ ++
Sbjct: 4 PEKSVLLELISRCSSL---RVFKQIQTQLITRDL-LRDDLIINKVVTFLGKSADFASYSS 59
Query: 133 QVFDEMPNK-DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
+ + + + ++ ++++ YA ++ + + + +G P+ FT + K CG
Sbjct: 60 VILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFV--SNGFSPDMFTFPPVFKACG 117
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+G+Q+HG K GF D+++V +SLV Y CG A VF E+ ++ VSW
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEM-PVRDVVSWT 176
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
+I F+KM E TY +L S+ VG L GK +HG +L
Sbjct: 177 GIITGFTRTGLYKEALDT--FSKMDVEP---NLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
K + GN L+ MY K +SDA +VF L K D VS NSM+ G KEA+
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID 291
Query: 372 LFKQM-LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
LF M GI+P+ S+L+AC+ G +D G + + G++ IVD+
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 431 GRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G ++ A+ G+ W ALLG +H
Sbjct: 352 AKCGYIETALEIFNGIR-SKNVFTWNALLGGLAIH 385
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 17/317 (5%)
Query: 56 SKTGLH--VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
++TGL+ LD + VEP+ A Y +L + ++G L G+ +H L + + L
Sbjct: 183 TRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLI--SLE 240
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
N+++ MY +C L A +VF E+ KD V+W SMI+G ER+ +A+ LF +++
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF-SLMQTS 299
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
SG +P+ L+S++ C + + GR VH G + +G+++VDMYA+CG++
Sbjct: 300 SGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
A +F+ + R KN +WNAL+ F +M + G+ T+ A L +
Sbjct: 360 ALEIFNGI-RSKNVFTWNALLGGLAIHGHGLESLRY--FEEMVKLGFKPNLVTFLAALNA 416
Query: 294 ASSVGSLEQGKWLHGHMLKSGR-----KLVGYVGNTLLHMYAKSGSISDARKVFDRL-VK 347
G +++G+ + H +KS KL Y ++ + ++G + +A ++ + VK
Sbjct: 417 CCHTGLVDEGRR-YFHKMKSREYNLFPKLEHY--GCMIDLLCRAGLLDEALELVKAMPVK 473
Query: 348 VDVVSCNSMLIGYAQHG 364
DV C ++L G
Sbjct: 474 PDVRICGAILSACKNRG 490
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 17/188 (9%)
Query: 55 RSKTGLHVLDLIDRGA-VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
RSK + + L+ + ++PD + +L C LG + GR VH + L ++ D
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL--TAGIKWDTH 342
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
I +++ MYA+CG +E A ++F+ + +K+ TW +++ G A + +++L F +M++
Sbjct: 343 IGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK-- 400
Query: 174 SGSRPNEFT-LSSLVKCC--GLIPSYGDGRQVHGCCWKHGFCDNVFVG----SSLVDMYA 226
G +PN T L++L CC GL+ +GR+ + N+F ++D+
Sbjct: 401 LGFKPNLVTFLAALNACCHTGLVD---EGRRYFHKMKSREY--NLFPKLEHYGCMIDLLC 455
Query: 227 RCGFLGEA 234
R G L EA
Sbjct: 456 RAGLLDEA 463
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 258/472 (54%), Gaps = 11/472 (2%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
GL + + + V + Y L+ CTKL L +G+ H + ++ LV S+
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV--TSL 283
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
L MY +CGD+ +AR+VF+E + D V WT+MI GY N +AL LF M G +P
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM--KGVEIKP 341
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
N T++S++ CGLI + GR VHG K G D V ++LV MYA+C +A+ VF
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVF 400
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
E+ K+ V+WN++I LF +M E T ++L + +S+G
Sbjct: 401 -EMESEKDIVAWNSIISGFSQNGSIHEALF--LFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 299 SLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
SL G LH + +K G +VG LL YAK G AR +FD + + + ++ ++M
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFG 415
+ GY + G ++ LF++ML+ +PN+ TF S+L+AC H G+++EG++YF M + +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 416 VEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAA 475
P HY +VD+L RAG L++A+ IE M I+P +GA L MH + ++G
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 476 QKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+K+ +L P + +VL++N+YAS GRW +A +R +MK GL K S +E
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 211/431 (48%), Gaps = 14/431 (3%)
Query: 35 DNVPELDKSYYIIDDRN--LLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D +PE D + + R L + S + + DL+ + D ++ + LK CT+L L
Sbjct: 100 DQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLD 159
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
G+ +H L++ P D V+ +L MYA+CG+++ A +VF+++ ++ V WTSMI G
Sbjct: 160 NGKKIHCQ-LVKVPSF--DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC 212
Y +N+ + LVLF M + NE+T +L+ C + + G+ HGC K G
Sbjct: 217 YVKNDLCEEGLVLFNRMRE--NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
+ + +SL+DMY +CG + A+ VF+E + V W A+I LF
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSH-VDLVMWTAMI--VGYTHNGSVNEALSLF 331
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
KM+ T +++L + +LE G+ +HG +K G V N L+HMYAK
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKC 390
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
DA+ VF+ + D+V+ NS++ G++Q+G EA+ LF +M + + PN +T SL
Sbjct: 391 YQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLF 450
Query: 393 TACSHAGLLDEGERY--FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
+AC+ G L G + + F V ++D + G A I + E
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEK 509
Query: 451 TAAIWGALLGA 461
W A++G
Sbjct: 510 NTITWSAMIGG 520
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 174/336 (51%), Gaps = 11/336 (3%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
LL CT + LR+ SH +L + D+ I ++ +Y G + AR VFD++P
Sbjct: 50 LLSKCTNIDSLRQ-----SHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
D W M+ Y N+ +V+ + L+ +++ G R ++ S +K C + +G+
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMK--HGFRYDDIVFSKALKACTELQDLDNGK 162
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXX 260
++H K DNV V + L+DMYA+CG + A VF+++ +N V W ++I
Sbjct: 163 KIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDI-TLRNVVCWTSMIAGYVKN 220
Query: 261 XXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY 320
LF +M+ E+TY L+ + + + +L QGKW HG ++KSG +L
Sbjct: 221 DLCEEGLV--LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
+ +LL MY K G IS+AR+VF+ VD+V +M++GY +G EA+ LF++M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
I+PN +T S+L+ C L+ G L + G+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI 374
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 113/240 (47%), Gaps = 4/240 (1%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
RQ HG +G ++ + + LV +Y G+ +A+ VFD++ + W ++
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE-PDFYLWKVMLRCYCL 119
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
L+ + + G+ + +S L + + + L+ GK +H ++K
Sbjct: 120 NKESVEVVK--LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV-PSFDN 176
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
V LL MYAK G I A KVF+ + +VV SM+ GY ++ +E +VLF +M +
Sbjct: 177 VVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ N+ T+ +L+ AC+ L +G+ + + + G+E ++D+ + G + A
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 262/476 (55%), Gaps = 8/476 (1%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V+P + Y +L C+KLG G+L+H+ ++ D DL + N++L MY CGD+
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVS--DSLADLPLDNALLDMYCSCGDMRE 353
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A VF + N + V+W S+I+G ++N A++++ +LR S RP+E+T S+ +
Sbjct: 354 AFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM-STPRPDEYTFSAAISAT 412
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G+ +HG K G+ +VFVG++L+ MY + AQ VFD + + ++ V W
Sbjct: 413 AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM-KERDVVLW 471
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
+I F +M RE F+ S+++ + S + L QG+ H
Sbjct: 472 TEMIVGHSRLGNSELAVQ--FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+++G V V L+ MY K+G A +F D+ NSML Y+QHG ++A+
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
F+Q+L +G P+ +T+LSLL ACSH G +G+ + M++ G++ HY+ +V+L+
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLV 649
Query: 431 GRAGLLDRAMSFIEGMLI-EPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH 489
+AGL+D A+ IE A +W LL A + +++G YAA+++ +LDP + H
Sbjct: 650 SKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATH 709
Query: 490 VLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI-ENSVHVFVSNDIAHPQ 544
+LL+N+YA GRW++ A +R+ ++ K+P SW+E+ N+ VF S D ++P+
Sbjct: 710 ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 227/451 (50%), Gaps = 12/451 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V+P+ + + L++ C L + G ++S + D++V+Q SVL MY+ CGDLE
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQII--KLGYSDNVVVQTSVLGMYSSCGDLES 252
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR++FD + N+D V W +MI G +N++ D L+ F +ML SG P +FT S ++ C
Sbjct: 253 ARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLM--SGVDPTQFTYSIVLNGC 310
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ SY G+ +H ++ + ++L+DMY CG + EA VF + N VSW
Sbjct: 311 SKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHN-PNLVSW 369
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYG-VTEFTYSALLCSASSVGSLEQGKWLHGH 309
N++I ++ ++ R E+T+SA + + + GK LHG
Sbjct: 370 NSII--SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQ 427
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+ K G + +VG TLL MY K+ A+KVFD + + DVV M++G+++ G + A
Sbjct: 428 VTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
V F +M R+ + + S++ ACS +L +GE + L + G + +S +VD+
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH 489
G+ G + A + I + P W ++LGA H +E +++ E + F A
Sbjct: 548 YGKNGKYETAET-IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE-NGFMPDAV 605
Query: 490 VLLANIYASAGRWK--EAANIRKMMKDSGLK 518
L+ + A + R + + MK+ G+K
Sbjct: 606 TYLSLLAACSHRGSTLQGKFLWNQMKEQGIK 636
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 176/343 (51%), Gaps = 8/343 (2%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDV-RDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
L + C + L+ R +H+ L + N+++ MY RCG LE AR+VFD+MP
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 140 NKDTVTWTSMITGYAQN-ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
+++ V++ ++ + Y++N + A A L M +PN T +SLV+ C ++
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHM--AFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G ++ K G+ DNV V +S++ MY+ CG L A+ +FD + ++ V+WN +I
Sbjct: 218 GSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN-RDAVAWNTMI--VG 274
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
F M G T+FTYS +L S +GS GK +H ++ S
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
+ N LL MY G + +A VF R+ ++VS NS++ G +++GFG++A+++++++LR
Sbjct: 335 LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 379 -DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
P++ TF + ++A + G+ + + G E V
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 15/295 (5%)
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
N+++ MY RC LE AR+VFD+MP ++ VT + + E L +++ GS
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF---EYVSMGSSLHSQIIKLGS 81
Query: 175 GS----RP-NEFTLS--SLVKCCGLIPSYGDGRQVHGCCWKHG---FCDNVFVGSSLVDM 224
P NE S L + C I RQ+H G ++ + ++L+ M
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
Y RCG L +A+ VFD++ +N VS+NAL L M E
Sbjct: 142 YVRCGSLEQARKVFDKMPH-RNVVSYNAL-YSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
T+++L+ + + + G L+ ++K G V ++L MY+ G + AR++FD
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
+ D V+ N+M++G ++ ++ ++ F+ ML G++P T+ +L CS G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 162/539 (30%), Positives = 286/539 (53%), Gaps = 40/539 (7%)
Query: 56 SKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
S +G+ V + G++ + Y RL+ T + +RE + +H+ L++ + D +
Sbjct: 7 SFSGVTVPAMPSSGSLSGNT--YLRLIDT--QCSTMRELKQIHAS-LIKTGLISDTVTAS 61
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+ F A D+ +A VF + +K+ W ++I G++++ A+ +F DML
Sbjct: 62 RVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPS 121
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY---------- 225
+P T S+ K G + DGRQ+HG K G D+ F+ ++++ MY
Sbjct: 122 VKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAW 181
Query: 226 ---------------------ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXX 264
A+CG + +AQ +FDE+ + +N VSWN++I
Sbjct: 182 RIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQ-RNGVSWNSMISGFVRNGRFK 240
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
+F +MQ + FT +LL + + +G+ EQG+W+H +++++ +L V
Sbjct: 241 DALD--MFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTA 298
Query: 325 LLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
L+ MY K G I + VF+ K + NSM++G A +GF + A+ LF ++ R G+EP+
Sbjct: 299 LIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPD 358
Query: 385 DITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
++F+ +LTAC+H+G + + +F+LM++ + +EP + HY +V++LG AGLL+ A + I
Sbjct: 359 SVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALI 418
Query: 444 EGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWK 503
+ M +E IW +LL A +EM AA+ + +LDP + +VLL+N YAS G ++
Sbjct: 419 KNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFE 478
Query: 504 EAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEI 562
EA R +MK+ ++KE CS +E++ VH F+S HP+ +I + + LN ++ I
Sbjct: 479 EAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTI 537
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R K L + + V+PD LL C LG +GR +H + + ++ ++
Sbjct: 238 RFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNS--IV 295
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLR 171
+++ MY +CG +E VF+ P K W SMI G A N ERA+D LF ++ R
Sbjct: 296 VTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMD---LFSELER 352
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC-------CWKHGFCDNVFVGSSLVDM 224
SG P+ + ++ C +VH K+ ++ + +V++
Sbjct: 353 --SGLEPDSVSFIGVLTAC------AHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNV 404
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALI 254
G L EA+A+ + ++ V W++L+
Sbjct: 405 LGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 245/452 (54%), Gaps = 11/452 (2%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ-----NERAVDALVL 165
D+V++ ++L MYA+ G L+ A ++F MP+K+ VT+ +MI+G+ Q +E + +A L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
F DM R G P+ T S ++K C + GRQ+H K+ F + F+GS+L+++Y
Sbjct: 346 FMDMQR--RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY 403
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
A G + F + ++ SW ++I LF ++ E+
Sbjct: 404 ALMGSTEDGMQCFASTSK-QDIASWTSMIDCHVQNEQLESAFD--LFRQLFSSHIRPEEY 460
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
T S ++ + + +L G+ + G+ +KSG V + + MYAKSG++ A +VF +
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE 405
DV + ++M+ AQHG EA+ +F+ M GI+PN FL +L AC H GL+ +G
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 406 RYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
+YFQ M+ + + P H+ +VDLLGR G L A + I + W ALL + +
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
+K +G A+++ EL+P SG++VLL NIY +G A +R++M+D G+KKEPA S
Sbjct: 641 YKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALS 700
Query: 525 WVEIENSVHVFVSNDIAHPQKDKIIKMWEKLN 556
W+ I N H F D++HP I M E ++
Sbjct: 701 WIVIGNQTHSFAVADLSHPSSQMIYTMLETMD 732
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 15/346 (4%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D Y+ L +T K G + G+L H H + + L + N++L MY +C +L ARQ
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMI--KSSLNPCLYLLNNLLNMYCKCRELGFARQ 103
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
+FD MP ++ +++ S+I+GY Q A+ LF + + + ++FT + + CG
Sbjct: 104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEARE--ANLKLDKFTYAGALGFCGER 161
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
G +HG +G VF+ + L+DMY++CG L +A ++FD +++VSWN+L
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE-RDQVSWNSL 220
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL---CSASSVGSLEQGKWLHGHM 310
I L AKM R+G +T + ++L C + G +E+G +H +
Sbjct: 221 I--SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYT 278
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG-----F 365
K G + V LL MYAK+GS+ +A K+F + +VV+ N+M+ G+ Q
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
EA LF M R G+EP+ TF +L ACS A L+ G + L+
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
+D+ RG +EP + + +LK C+ L GR +H+ L+ + + D I ++++ +Y
Sbjct: 347 MDMQRRG-LEPSPSTFSVVLKACSAAKTLEYGRQIHA--LICKNNFQSDEFIGSALIELY 403
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
A G E Q F +D +WTSMI + QNE+ A LF + S RP E+T
Sbjct: 404 ALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF--SSHIRPEEYT 461
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+S ++ C + G Q+ G K G V +S + MYA+ G + A VF E+
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV- 520
Query: 243 RWKNEVSWNALI 254
+ + +++A+I
Sbjct: 521 QNPDVATYSAMI 532
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G+ HG K +++ ++L++MY +C LG A+ +FD + +N +S+N+LI
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE-RNIISFNSLISGYT 124
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
LF + + + +FTY+ L L+ G+ LHG ++ +G
Sbjct: 125 QMGFYEQAME--LFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ 182
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
++ N L+ MY+K G + A +FDR + D VS NS++ GY + G +E + L +M R
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242
Query: 379 DGIEPNDITFLSLLTACS---HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL 435
DG+ S+L AC + G +++G + G+E + ++D+ + G
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302
Query: 436 LDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
L A+ M + + G M + + + A K+F
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%)
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
Y L +A+ GS+ GK HGHM+KS Y+ N LL+MY K + AR++FDR+
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+ +++S NS++ GY Q GF ++A+ LF + ++ + T+ L C LD GE
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
L+ G+ +V ++D+ + G LD+AMS +
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 268 bits (686), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 252/468 (53%), Gaps = 8/468 (1%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
LD+ + P+ + + + G LREG+ VH + +DLV++ +L +Y
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY--CTRMGFSNDLVVKTGILDVY 250
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
A+ + +AR+VFD K+ VTW++MI GY +NE +A +F ML + +
Sbjct: 251 AKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
+ ++ C GR VH K GF ++ V ++++ YA+ G L +A F E+G
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
K+ +S+N+LI LF +M+ G T +L + S + +L
Sbjct: 371 -LKDVISYNSLITGCVVNCRPEESFR--LFHEMRTSGIRPDITTLLGVLTACSHLAALGH 427
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
G HG+ + G + + N L+ MY K G + A++VFD + K D+VS N+ML G+
Sbjct: 428 GSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGI 487
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ--FGVEPKV 420
HG GKEA+ LF M G+ P+++T L++L+ACSH+GL+DEG++ F M + F V P++
Sbjct: 488 HGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRI 547
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE 480
HY + DLL RAG LD A F+ M EP + G LL A W +K E+G ++K+
Sbjct: 548 DHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQS 607
Query: 481 LDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI 528
L + + VLL+N Y++A RW++AA IR + K GL K P SWV++
Sbjct: 608 LGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 187/377 (49%), Gaps = 4/377 (1%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V P + Y +LK C L + +G+L+HSH + D D+ + +++ YA+CG+LE
Sbjct: 98 GVRPTKYTYPFVLKACAGLRAIDDGKLIHSH--VNCSDFATDMYVCTALVDFYAKCGELE 155
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
A +VFDEMP +D V W +MI+G++ + D + LF DM R G PN T+ +
Sbjct: 156 MAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM-RRIDGLSPNLSTIVGMFPA 214
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
G + +G+ VHG C + GF +++ V + ++D+YA+ + A+ VFD L KNEV+
Sbjct: 215 LGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNEVT 273
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W+A+I + VT +L + G L G+ +H +
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+K+G L V NT++ YAK GS+ DA + F + DV+S NS++ G + +E+
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEES 393
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
LF +M GI P+ T L +LTACSH L G G S ++D+
Sbjct: 394 FRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 430 LGRAGLLDRAMSFIEGM 446
+ G LD A + M
Sbjct: 454 YTKCGKLDVAKRVFDTM 470
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 173/335 (51%), Gaps = 15/335 (4%)
Query: 77 LYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD 136
++ LL+TC + L G+++H H L ++ + V+ N + +YA C ++E AR VFD
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFD 59
Query: 137 EMPNK--DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
E+P+ + + W MI YA N+ A AL L+ ML SG RP ++T ++K C +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLN--SGVRPTKYTYPFVLKACAGLR 117
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
+ DG+ +H F +++V ++LVD YA+CG L A VFDE+ + ++ V+WNA+I
Sbjct: 118 AIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPK-RDMVAWNAMI 176
Query: 255 XXXXXXXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
LF M+R +G T + + G+L +GK +HG+ +
Sbjct: 177 --SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
G V +L +YAKS I AR+VFD K + V+ ++M+ GY ++ KEA +F
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 374 KQMLRDG----IEPNDITFLSLLTACSHAGLLDEG 404
QML + + P I +L C+ G L G
Sbjct: 295 FQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGG 327
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 220 SLVDMYARCGFLGEAQAVFDELGRWK-NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
+L +YA C + A+ VFDE+ + N ++W+ +I L+ KM
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALD--LYYKMLNS 97
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
G T++TY +L + + + +++ GK +H H+ S YV L+ YAK G + A
Sbjct: 98 GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMA 157
Query: 339 RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR-DGIEPNDITFLSLLTACSH 397
KVFD + K D+V+ N+M+ G++ H + + LF M R DG+ PN T + + A
Sbjct: 158 IKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR 217
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGA 457
AG L EG+ + G + I+D+ ++ + A + + + W A
Sbjct: 218 AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD-LDFKKNEVTWSA 276
Query: 458 LLGASWMHKKIEMGAYAAQKVFEL 481
++G + + EM A + F++
Sbjct: 277 MIGG---YVENEMIKEAGEVFFQM 297
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 278/542 (51%), Gaps = 37/542 (6%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLG-KLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
L+++ G V PD + LL + G L G+ +H H + + +L +QN+++ M
Sbjct: 123 LNMLKEG-VTPDSHTFPFLLNGLKRDGGALACGKKLHCHVV--KFGLGSNLYVQNALVKM 179
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y+ CG ++ AR VFD +D +W MI+GY + + +++ L +M R P
Sbjct: 180 YSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS--PTSV 237
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
TL ++ C + ++VH + ++ + ++LV+ YA CG + A +F +
Sbjct: 238 TLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXX-----------------------------XXXXLF 272
+ ++ +SW +++ +F
Sbjct: 298 -KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
+MQ G EFT ++L + + +GSLE G+W+ ++ K+ K VGN L+ MY K
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
G A+KVF + + D + +M++G A +G G+EA+ +F QM I+P+DIT+L +L
Sbjct: 417 GCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVL 476
Query: 393 TACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT 451
+AC+H+G++D+ ++F MR +EP + HY +VD+LGRAGL+ A + M + P
Sbjct: 477 SACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPN 536
Query: 452 AAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKM 511
+ +WGALLGAS +H M AA+K+ EL+P + LL NIYA RWK+ +R+
Sbjct: 537 SIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRK 596
Query: 512 MKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHV 571
+ D +KK P S +E+ H FV+ D +H Q ++I E+L QE Y+PDT +
Sbjct: 597 IVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSEL 656
Query: 572 LL 573
L
Sbjct: 657 LF 658
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 54/416 (12%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQ----NPDVRDDLVIQNSVLFMYARC 125
++ D + + +L C + ++ +HS + + NP + L + F +R
Sbjct: 29 SISNDYSRFISILGVCKTTDQFKQ---LHSQSITRGVAPNPTFQKKLFV-----FWCSRL 80
Query: 126 GD-LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG--SGSRPNEFT 182
G + +A ++F ++P D V W +MI G+++ + + + L+ +ML+ G S F
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
L+ L + G + G+++H K G N++V ++LV MY+ CG + A+ VFD
Sbjct: 141 LNGLKRDGGALAC---GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-- 195
Query: 243 RWKNEV-SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
R K +V SWN +I L +M+R T T +L + S V +
Sbjct: 196 RCKEDVFSWNLMI--SGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKD 253
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA 361
K +H ++ + + + N L++ YA G + A ++F + DV+S S++ GY
Sbjct: 254 LCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYV 313
Query: 362 QHGFGK-------------------------------EAVVLFKQMLRDGIEPNDITFLS 390
+ G K E++ +F++M G+ P++ T +S
Sbjct: 314 ERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVS 373
Query: 391 LLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+LTAC+H G L+ GE + + ++ V ++D+ + G ++A M
Sbjct: 374 VLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%), Gaps = 25/313 (7%)
Query: 49 DRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRL---LKTCTKLGKLR-EGRLVHSHFLLQ 104
+RNL+ S T + +L ++ + D+ L +R+ + C LR E LV+++
Sbjct: 228 ERNLV--SPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 105 NPDVR---------DDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ 155
D+ D++ S++ Y G+L+ AR FD+MP +D ++WT MI GY +
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLR 345
Query: 156 NERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNV 215
++L +F +M +G P+EFT+ S++ C + S G + K+ ++V
Sbjct: 346 AGCFNESLEIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDV 403
Query: 216 FVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
VG++L+DMY +CG +AQ VF ++ + +++ +W A++ +F +M
Sbjct: 404 VVGNALIDMYFKCGCSEKAQKVFHDMDQ-RDKFTWTAMV--VGLANNGQGQEAIKVFFQM 460
Query: 276 QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR---KLVGYVGNTLLHMYAKS 332
Q + TY +L + + G ++Q + M R LV Y ++ M ++
Sbjct: 461 QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY--GCMVDMLGRA 518
Query: 333 GSISDARKVFDRL 345
G + +A ++ ++
Sbjct: 519 GLVKEAYEILRKM 531
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 7/249 (2%)
Query: 271 LFAKMQREGYGVTEFTYSALLCS-ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
L+ M +EG T+ LL G+L GK LH H++K G YV N L+ MY
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
+ G + AR VFDR K DV S N M+ GY + +E++ L +M R+ + P +T L
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL 240
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
+L+ACS D +R + + + EP + +V+ G +D A+ M
Sbjct: 241 LVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR 300
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG-AHVLLANIYASAGRWKEAANI 508
+ W +++ +++ A+ F+ P + ++ + Y AG + E+ I
Sbjct: 301 DVIS-WTSIVKGYVERGNLKL----ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 509 RKMMKDSGL 517
+ M+ +G+
Sbjct: 356 FREMQSAGM 364
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 7/223 (3%)
Query: 35 DNVPELDKSYYIIDDRNLLRRS--KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D +P D+ + I LR L + + + PD +L C LG L
Sbjct: 326 DQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
G + ++ + +++D+V+ N+++ MY +CG E A++VF +M +D TWT+M+ G
Sbjct: 386 IGEWIKTY--IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGF 211
A N + +A+ +F M +P++ T ++ C R+ H
Sbjct: 444 LANNGQGQEAIKVFFQM--QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRI 501
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
++ +VDM R G + EA + ++ N + W AL+
Sbjct: 502 EPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/519 (31%), Positives = 273/519 (52%), Gaps = 14/519 (2%)
Query: 46 IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
+I N S+ L + + +EP+ +L +C +G +REG+ VH + +
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
D + + +++ +YA CG L V + +++ V W S+I+ YA + AL L
Sbjct: 334 LDPNYE-SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCC---GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
F M+ +P+ FTL+S + C GL+P G+Q+HG + D FV +SL+
Sbjct: 393 FRQMVT--QRIKPDAFTLASSISACENAGLVPL---GKQIHGHVIRTDVSDE-FVQNSLI 446
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
DMY++ G + A VF+++ + ++ V+WN+++ LF M +
Sbjct: 447 DMYSKSGSVDSASTVFNQI-KHRSVVTWNSMLCGFSQNGNSVEAIS--LFDYMYHSYLEM 503
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
E T+ A++ + SS+GSLE+GKW+H ++ SG K + + L+ MYAK G ++ A VF
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLNAAETVF 562
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+ +VS +SM+ Y HG A+ F QM+ G +PN++ F+++L+AC H+G ++
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 403 EGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS 462
EG+ YF LM+ FGV P H+A +DLL R+G L A I+ M A++WG+L+
Sbjct: 623 EGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 463 WMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
+H+K+++ + ++ +G + LL+NIYA G W+E +R MK S LKK P
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPG 742
Query: 523 CSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
S +EI+ V F + + Q D+I + L E
Sbjct: 743 YSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNE 781
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 219/405 (54%), Gaps = 12/405 (2%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++D G VEPD +++ C +LG LR R VH + D+ + L NS+L MY++
Sbjct: 193 MVDDG-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC--NSLLTMYSK 249
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
CGDL + ++F+++ K+ V+WT+MI+ Y + E + AL F +M++ SG PN TL
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK--SGIEPNLVTLY 307
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNV-FVGSSLVDMYARCGFLGEAQAVFDELGR 243
S++ CGLI +G+ VHG + N + +LV++YA CG L + + V +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+N V+WN+LI LF +M + FT ++ + + + G + G
Sbjct: 368 -RNIVAWNSLI--SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K +HGH++++ +V N+L+ MY+KSGS+ A VF+++ VV+ NSML G++Q+
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
G EA+ LF M +E N++TFL+++ ACS G L++G+ + G++ +
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDT 543
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
A ++D+ + G L+ A + M + +++ A MH +I
Sbjct: 544 A-LIDMYAKCGDLNAAETVFRAMSSRSIVSW-SSMINAYGMHGRI 586
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 174/361 (48%), Gaps = 11/361 (3%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y L ++C+ L + + +H+H L+ RD L + ++ YA G + +R VF+
Sbjct: 4 YMPLFRSCSSLRLVSQ---LHAHLLVTGRLRRDPLPV-TKLIESYAFMGSPDSSRLVFEA 59
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC-GLIPSY 196
P D+ + +I A+ L+ ++ ++ ++F S+++ C G
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV--SETTQISKFVFPSVLRACAGSREHL 117
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
G +VHG K G D+ + +SL+ MY + G L +A+ VFD + ++ V+W+ L+
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM-PVRDLVAWSTLVSS 176
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
+F M +G T +++ + +G L + +HG + +
Sbjct: 177 CLENGEVVKALR--MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD 234
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
L + N+LL MY+K G + + ++F+++ K + VS +M+ Y + F ++A+ F +M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA-KIVDLLGRAGL 435
++ GIEPN +T S+L++C GL+ EG+ + ++P + +V+L G
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 436 L 436
L
Sbjct: 355 L 355
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 259/448 (57%), Gaps = 12/448 (2%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK 141
+K C++LG++R GR H + + + I +++ ++Y + AR+VFDEMP
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEW--NHFISSTLAYLYGVNREPVDARRVFDEMPEP 227
Query: 142 DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ 201
D + WT++++ +++N+ +AL LF M RG G P+ T +++ CG + G++
Sbjct: 228 DVICWTAVLSAFSKNDLYEEALGLFYAMHRG-KGLVPDGSTFGTVLTACGNLRRLKQGKE 286
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX 261
+HG +G NV V SSL+DMY +CG + EA+ VF+ + + KN VSW+AL+
Sbjct: 287 IHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK-KNSVSWSALLGGYCQNG 345
Query: 262 XXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV 321
+F +M+ + + + +L + + + ++ GK +HG ++ G V
Sbjct: 346 EHEKAIE--IFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 322 GNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
+ L+ +Y KSG I A +V+ ++ ++++ N+ML AQ+G G+EAV F M++ GI
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAM 440
+P+ I+F+++LTAC H G++DEG YF LM + +G++P HY+ ++DLLGRAGL + A
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 441 SFIEGMLIEPTAAIWGALLGASWMHKKIE-MGAYAAQKVFELDPFYSGAHVLLANIYASA 499
+ +E A++WG LLG + + A+++ EL+P Y ++VLL+N+Y +
Sbjct: 520 NLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAI 579
Query: 500 GRWKEAANIRKMMKDSGLKKEPACSWVE 527
GR +A NIRK+M G+ K SW++
Sbjct: 580 GRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 205/407 (50%), Gaps = 20/407 (4%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
+ +L+ + LY LL+TC K+ G H+H + + D + NS+L
Sbjct: 46 IRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVV--KSGLETDRNVGNSLL 103
Query: 120 FMYARCG-DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+Y + G + R+VFD KD ++WTSM++GY + V AL +F +M+ G +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA-- 161
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
NEFTLSS VK C + GR HG HGF N F+ S+L +Y +A+ VF
Sbjct: 162 NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE--FTYSALLCSASS 296
DE+ + + W A++ LF M R G G+ T+ +L + +
Sbjct: 222 DEMPE-PDVICWTAVL--SAFSKNDLYEEALGLFYAMHR-GKGLVPDGSTFGTVLTACGN 277
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
+ L+QGK +HG ++ +G V ++LL MY K GS+ +AR+VF+ + K + VS +++
Sbjct: 278 LRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSAL 337
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDI-TFLSLLTACSHAGLLDEG-ERYFQLMRQF 414
L GY Q+G ++A+ +F++M E D+ F ++L AC+ + G E + Q +R+
Sbjct: 338 LGGYCQNGEHEKAIEIFREM-----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR- 391
Query: 415 GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
G V + ++DL G++G +D A M I W A+L A
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/488 (32%), Positives = 262/488 (53%), Gaps = 41/488 (8%)
Query: 109 RDDLVIQNSVLFMYA--RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ-NERAVDALVL 165
RD+L N F+ A G L +A VF P +T +MI + +E ++ +
Sbjct: 45 RDNL---NVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAI 101
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
++P+ FT ++K + GRQ+HG GF +V V + L+ MY
Sbjct: 102 TVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMY 161
Query: 226 ARCGFLGEAQAVFDEL-----GRW---------------------------KNEVSWNAL 253
CG LG+A+ +FDE+ W +NEVSW +
Sbjct: 162 FSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCV 221
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
I +F +M E E T A+L + + +GSLE G+ + ++
Sbjct: 222 ISGYAKSGRASEAIE--VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
G + N ++ MYAKSG+I+ A VF+ + + +VV+ +++ G A HG G EA+ +F
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGR 432
+M++ G+ PND+TF+++L+ACSH G +D G+R F MR ++G+ P + HY ++DLLGR
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
AG L A I+ M + AAIWG+LL AS +H +E+G A ++ +L+P SG ++LL
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLL 459
Query: 493 ANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMW 552
AN+Y++ GRW E+ +R MMK G+KK S +E+EN V+ F+S D+ HPQ ++I ++
Sbjct: 460 ANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Query: 553 EKLNQEIK 560
++++ +I+
Sbjct: 520 QEMDLQIQ 527
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R+ + V + VEPD +L C LG L G + S+ + + + + +
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY--VDHRGMNRAVSL 287
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
N+V+ MYA+ G++ A VF+ + ++ VTWT++I G A + +AL +F M++ +
Sbjct: 288 NNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVK--A 345
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCC-WKHGFCDNVFVGSSLVDMYARCGFLGE 233
G RPN+ T +++ C + G+++ K+G N+ ++D+ R G L E
Sbjct: 346 GVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLRE 405
Query: 234 AQAVFDELGRWKNEVSWNALI 254
A V + N W +L+
Sbjct: 406 ADEVIKSMPFKANAAIWGSLL 426
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 157/506 (31%), Positives = 280/506 (55%), Gaps = 18/506 (3%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRD-DLVIQNSVLFM 121
L+ I + D Y + L ++ GR H F+ +N R+ +VI NS++ M
Sbjct: 306 LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG-FVSKN--FRELPIVIVNSLMVM 362
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y+RCG + + VF M +D V+W +MI+ + QN + L+L +M + G + +
Sbjct: 363 YSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK--QGFKIDYI 420
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG--SSLVDMYARCGFLGEAQAVFD 239
T+++L+ + + G+Q H + G F G S L+DMY++ G + +Q +F+
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGI---QFEGMNSYLIDMYSKSGLIRISQKLFE 477
Query: 240 ELG-RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG 298
G +++ +WN++I +F KM + T +++L + S +G
Sbjct: 478 GSGYAERDQATWNSMISGYTQNGHTEKTFL--VFRKMLEQNIRPNAVTVASILPACSQIG 535
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
S++ GK LHG ++ +V + L+ MY+K+G+I A +F + + + V+ +M++
Sbjct: 536 SVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMIL 595
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVE 417
GY QHG G+ A+ LF M GI+P+ ITF+++L+ACS++GL+DEG + F+ MR+ + ++
Sbjct: 596 GYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQ 655
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPT-AAIWGALLGASWMHKKIEMGAYAAQ 476
P HY I D+LGR G ++ A F++G+ E A +WG+LLG+ +H ++E+ ++
Sbjct: 656 PSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSE 715
Query: 477 KVFELD--PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHV 534
++ + D +SG VLL+N+YA +WK +R+ M++ GLKKE S +EI V+
Sbjct: 716 RLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNC 775
Query: 535 FVSNDIAHPQKDKIIKMWEKLNQEIK 560
FVS D HP +I + + L ++++
Sbjct: 776 FVSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 202/400 (50%), Gaps = 14/400 (3%)
Query: 43 SYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFL 102
S+Y+ RN + G+ + R V+P + + + +++ + + L
Sbjct: 187 SWYVKTGRNAEACRQFGIMM-----RMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 103 LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDA 162
+ DL + +S + MYA GD+E +R+VFD ++ W +MI Y QN+ V++
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 163 LVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
+ LF + + G +E T + GRQ HG K+ + + +SL+
Sbjct: 302 IELFLEAI-GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLM 360
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
MY+RCG + ++ VF + R ++ VSWN +I L +MQ++G+ +
Sbjct: 361 VMYSRCGSVHKSFGVFLSM-RERDVVSWNTMI--SAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
T +ALL +AS++ + E GK H +++ G + G + + L+ MY+KSG I ++K+F
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLF 476
Query: 343 D--RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+ + D + NSM+ GY Q+G ++ ++F++ML I PN +T S+L ACS G
Sbjct: 477 EGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGS 536
Query: 401 LDEGERYFQL-MRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+D G++ +RQ+ ++ V + +VD+ +AG + A
Sbjct: 537 VDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYA 575
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 26/421 (6%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFL--LQNPDVRDDLVIQNSVLFMYAR------C 125
D Y LK C + L+ G+ VH H + LQN V+ NS++ MY C
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQN----SSRVVHNSLMNMYVSCLNAPDC 161
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
+ + R+VFD M K+ V W ++I+ Y + R +A F M+R +P+ + +
Sbjct: 162 FEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMR--MEVKPSPVSFVN 219
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHG--FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
+ + S +G K G + ++FV SS + MYA G + ++ VFD
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ- 302
EV WN +I L A +E E TY L +AS+V +L+Q
Sbjct: 280 RNIEV-WNTMIGVYVQNDCLVESIELFLEAIGSKEIVS-DEVTY---LLAASAVSALQQV 334
Query: 303 --GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
G+ HG + K+ R+L + N+L+ MY++ GS+ + VF + + DVVS N+M+ +
Sbjct: 335 ELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAF 394
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
Q+G E ++L +M + G + + IT +LL+A S+ + G++ + + G++ +
Sbjct: 395 VQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE- 453
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGM-LIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
+ ++D+ ++GL+ + EG E A W +++ + E +K+
Sbjct: 454 GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 480 E 480
E
Sbjct: 514 E 514
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 163/367 (44%), Gaps = 20/367 (5%)
Query: 104 QNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDAL 163
Q P +R S L + G+ + ARQ+FD +P TV W ++I G+ N +AL
Sbjct: 38 QTPSIR-------SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL 90
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
+ + M + + + +T SS +K C + G+ VH + + V +SL++
Sbjct: 91 LFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 224 MYARCGFLGE------AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQR 277
MY C + + VFD + R KN V+WN LI F M R
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNM-RRKNVVAWNTLISWYVKTGRNAEACRQ--FGIMMR 207
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMYAKSGSI 335
+ ++ + + S S+++ +G MLK G + V +V ++ + MYA+ G I
Sbjct: 208 MEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI 267
Query: 336 SDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDITFLSLLTA 394
+R+VFD V+ ++ N+M+ Y Q+ E++ LF + + I +++T+L +A
Sbjct: 268 ESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASA 327
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI 454
S ++ G ++ + + E + ++ + R G + ++ M E
Sbjct: 328 VSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMR-ERDVVS 386
Query: 455 WGALLGA 461
W ++ A
Sbjct: 387 WNTMISA 393
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 278/532 (52%), Gaps = 41/532 (7%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++ +G + PD Y +LK C + + GR+VH ++ + L + N+++ MY R
Sbjct: 135 MVSKG-IRPDAFTYPSVLKACGETLDVAFGRVVHGS--IEVSSYKSSLYVCNALISMYKR 191
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG----------- 173
++ AR++FD M +D V+W ++I YA +A LF M G
Sbjct: 192 FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 174 SG---------------SRPNEFTLS----SLV---KCCGLIPSYGDGRQVHGCCWKHGF 211
SG SR F S +++ K C LI + G+++HG +
Sbjct: 252 SGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSY 311
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXL 271
V ++L+ MY++C L A VF + + +WN++I L
Sbjct: 312 DGIDNVRNTLITMYSKCKDLRHALIVFRQTEE-NSLCTWNSIISGYAQLNKSEEASH--L 368
Query: 272 FAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG-RKLVGYVGNTLLHMYA 330
+M G+ T +++L + + +L+ GK H ++L+ K + N+L+ +YA
Sbjct: 369 LREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYA 428
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLS 390
KSG I A++V D + K D V+ S++ GY G G A+ LFK+M R GI+P+ +T ++
Sbjct: 429 KSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVA 488
Query: 391 LLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
+L+ACSH+ L+ EGER F M+ ++G+ P + H++ +VDL GRAG L +A I M +
Sbjct: 489 VLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIR 509
P+ A W LL A +H ++G +AA+K+ E+ P G +VL+AN+YA+AG W + A +R
Sbjct: 549 PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 510 KMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
+M+D G+KK+P C+W++ ++ +F D + P+ + + LNQ +K+
Sbjct: 609 TIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKD 660
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 177/411 (43%), Gaps = 45/411 (10%)
Query: 62 VLDLIDRGAVEPDRALYQ--RLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
+L L AV D L+ LL C + G VH+H + + LV + ++
Sbjct: 28 LLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPK--LV 85
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
Y+ A+ + + + W +I YA+NE + + + M+ G RP+
Sbjct: 86 TFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMV--SKGIRPD 143
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
FT S++K CG GR VHG + +++V ++L+ MY R +G A+ +FD
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL--------- 290
+ ++ VSWNA+I LF KM G V+ T++ +
Sbjct: 204 RMFE-RDAVSWNAVI--NCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGN 260
Query: 291 --------------------------LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
L + S +G++ GK +HG + S + V NT
Sbjct: 261 YVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNT 320
Query: 325 LLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
L+ MY+K + A VF + + + + NS++ GYAQ +EA L ++ML G +PN
Sbjct: 321 LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPN 380
Query: 385 DITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAG 434
IT S+L C+ L G+ + ++R+ + + +VD+ ++G
Sbjct: 381 SITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG 431
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 46 IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
II L +S+ H+L + +P+ +L C ++ L+ G+ H ++L+
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHC-YILRR 410
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
+D ++ NS++ +YA+ G + A+QV D M +D VT+TS+I GY AL L
Sbjct: 411 KCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVH---GCCWKHGFCDNVFVGSSLV 222
F +M R SG +P+ T+ +++ C +G ++ C + C F S +V
Sbjct: 471 FKEMTR--SGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHF--SCMV 526
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
D+Y R GFL +A+ + + + +W L+
Sbjct: 527 DLYGRAGFLAKAKDIIHNMPYKPSGATWATLL 558
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 240/447 (53%), Gaps = 32/447 (7%)
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
D+++A ++F+++ N + + S+I Y N D + ++ +LR S P+ FT +
Sbjct: 57 DMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRK-SFELPDRFTFPFM 115
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
K C + S G+QVHG K G +V ++L+DMY + L +A VFDE+ ++
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE-RD 174
Query: 247 EVSWNALIXXXXXXXXXXXXX-----------------------------XXXLFAKMQR 277
+SWN+L+ F +MQ
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
G E + ++L S + +GSLE GKW+H + + G V N L+ MY+K G IS
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
A ++F ++ DV+S ++M+ GYA HG A+ F +M R ++PN ITFL LL+ACSH
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 398 AGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWG 456
G+ EG RYF +MRQ + +EPK+ HY ++D+L RAG L+RA+ + M ++P + IWG
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWG 414
Query: 457 ALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
+LL + +++ A + EL+P G +VLLANIYA G+W++ + +RKM+++
Sbjct: 415 SLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNEN 474
Query: 517 LKKEPACSWVEIENSVHVFVSNDIAHP 543
+KK P S +E+ N V FVS D + P
Sbjct: 475 MKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 38/262 (14%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PDR + + K+C LG G+ VH H P R +V +N+++ MY + DL A
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP--RFHVVTENALIDMYMKFDDLVDAH 164
Query: 133 QVFDEMPNKDT-------------------------------VTWTSMITGYAQNERAVD 161
+VFDEM +D V+WT+MI+GY V+
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 162 ALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL 221
A+ F +M +G P+E +L S++ C + S G+ +H + GF V ++L
Sbjct: 225 AMDFFREMQL--AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNAL 282
Query: 222 VDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
++MY++CG + +A +F ++ K+ +SW+ +I F +MQR
Sbjct: 283 IEMYSKCGVISQAIQLFGQM-EGKDVISWSTMISGYAYHGNAHGAIET--FNEMQRAKVK 339
Query: 282 VTEFTYSALLCSASSVGSLEQG 303
T+ LL + S VG ++G
Sbjct: 340 PNGITFLGLLSACSHVGMWQEG 361
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 130/286 (45%), Gaps = 35/286 (12%)
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ S + ++++ HG + F+ + +VD + + A +F+++ N +N+
Sbjct: 20 VKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSN-PNVFLYNS 78
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLEQGKWLHGHML 311
+I ++ ++ R+ + + + FT+ + S +S+GS GK +HGH+
Sbjct: 79 IIRAYTHNSLYCDVIR--IYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK---- 367
K G + N L+ MY K + DA KVFD + + DV+S NS+L GYA+ G K
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 368 ---------------------------EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
EA+ F++M GIEP++I+ +S+L +C+ G
Sbjct: 197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGS 256
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
L+ G+ + G + ++++ + G++ +A+ M
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSH-----FLLQNPDVRDDLVIQNSVLFMYA 123
+EPD +L +C +LG L G+ +H + FL Q + N+++ MY+
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG-------VCNALIEMYS 287
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+CG + A Q+F +M KD ++W++MI+GYA + A A+ F +M R + +PN T
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR--AKVKPNGITF 345
Query: 184 SSLVKCCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
L+ C + + +G R + + L+D+ AR G L A + +
Sbjct: 346 LGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP 405
Query: 243 RWKNEVSWNALI 254
+ W +L+
Sbjct: 406 MKPDSKIWGSLL 417
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/530 (32%), Positives = 274/530 (51%), Gaps = 45/530 (8%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD +LK+ +L K+ EG VH + + + D + NS++ MYA G +E
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAV--KAGLEFDSYVSNSLMGMYASLGKIEITH 101
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+VFDEMP +D V+W +I+ Y N R DA+ +F M + S + +E T+ S + C
Sbjct: 102 KVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQE-SNLKFDEGTIVSTLSACSA 160
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ + G +++ F +V +G++LVDM+ +CG L +A+AVFD + R KN W +
Sbjct: 161 LKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSM-RDKNVKCWTS 218
Query: 253 LIXXXXXXXXXXXX-----------------------------XXXXLFAKMQREGYGVT 283
++ LF MQ G
Sbjct: 219 MVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
F +LL + G+LEQGKW+HG++ ++ + VG L+ MYAK G I A +VF
Sbjct: 279 NFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFY 338
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
+ + D S S++ G A +G A+ L+ +M G+ + ITF+++LTAC+H G + E
Sbjct: 339 EIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAE 398
Query: 404 GERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL 459
G + F M + V+PK H + ++DLL RAGLLD A I+ M E ++ +LL
Sbjct: 399 GRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLL 458
Query: 460 GASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK 519
A+ + +++ A+K+ +++ S AH LLA++YASA RW++ N+R+ MKD G++K
Sbjct: 459 SAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRK 518
Query: 520 EPACSWVEIENSVHVFVSND--IAHPQKDKIIKMWEK-----LNQEIKEI 562
P CS +EI+ H F+ D ++HP+ D+I M + L+ E KEI
Sbjct: 519 FPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDLEHKEI 568
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 154/347 (44%), Gaps = 41/347 (11%)
Query: 146 WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
+ M+ A + L LF ++ G G P+ FTL ++K G + +G +VHG
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELR--GQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K G + +V +SL+ MYA G + VFDE+ + ++ VSWN LI
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQ-RDVVSWNGLI--SSYVGNGRF 128
Query: 266 XXXXXLFAKMQRE-GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
+F +M +E E T + L + S++ +LE G+ ++ ++ V +GN
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSV-RIGNA 187
Query: 325 LLHMYAKSGSISDARKVFDRL----VKV---------------------------DVVSC 353
L+ M+ K G + AR VFD + VK DVV
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
+M+ GY Q EA+ LF+ M GI P++ +SLLT C+ G L++G+ + +
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 414 FGVEPKVSHYAKIVDLLGRAGLLDRAMS-FIEGMLIEPTAAIWGALL 459
V +VD+ + G ++ A+ F E + E A W +L+
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYE--IKERDTASWTSLI 352
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 134/253 (52%), Gaps = 10/253 (3%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
LF +++ +G FT +L S + + +G+ +HG+ +K+G + YV N+L+ MYA
Sbjct: 33 LFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA 92
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDITFL 389
G I KVFD + + DVVS N ++ Y +G ++A+ +FK+M ++ ++ ++ T +
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 390 SLLTACSHAGLLDEGERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
S L+ACS L+ GER ++ ++ +F + ++ + +VD+ + G LD+A + + M
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSMR- 209
Query: 449 EPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH-VLLANIYASAGRWKEAAN 507
+ W +++ +I+ A+ +FE P + N Y R+ EA
Sbjct: 210 DKNVKCWTSMVFGYVSTGRID----EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE 265
Query: 508 IRKMMKDSGLKKE 520
+ + M+ +G++ +
Sbjct: 266 LFRCMQTAGIRPD 278
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 53 LRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDL 112
R L + + + PD + LL C + G L +G+ +H + + V D
Sbjct: 257 FNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY--INENRVTVDK 314
Query: 113 VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
V+ +++ MYA+CG +E A +VF E+ +DT +WTS+I G A N + AL L+ +M
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM--E 372
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQV-HGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G R + T +++ C +GR++ H +H S L+D+ R G L
Sbjct: 373 NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLL 432
Query: 232 GEAQAVFDEL 241
EA+ + D++
Sbjct: 433 DEAEELIDKM 442
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 163/496 (32%), Positives = 260/496 (52%), Gaps = 22/496 (4%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
V + R + D Y LLK C+ L +++H+H ++ + D+ + N+++
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH--IEKLGLSSDIYVPNALIDC 161
Query: 122 YARCGDL--EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
Y+RCG L A ++F++M +DTV+W SM+ G + DA LF +
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF------------D 209
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGC--CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
E L+ ++ Y R++ ++ N S++V Y++ G + A+ +
Sbjct: 210 EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVM 269
Query: 238 FDELG-RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
FD++ KN V+W +I L +M G ++L + +
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADR--LVDQMVASGLKFDAAAVISILAACTE 327
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
G L G +H + +S YV N LL MYAK G++ A VF+ + K D+VS N+M
Sbjct: 328 SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTM 387
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FG 415
L G HG GKEA+ LF +M R+GI P+ +TF+++L +C+HAGL+DEG YF M + +
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 416 VEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAA 475
+ P+V HY +VDLLGR G L A+ ++ M +EP IWGALLGA MH ++++
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVL 507
Query: 476 QKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVF 535
+ +LDP G + LL+NIYA+A W+ A+IR MK G++K S VE+E+ +H F
Sbjct: 508 DNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEF 567
Query: 536 VSNDIAHPQKDKIIKM 551
D +HP+ D+I +M
Sbjct: 568 TVFDKSHPKSDQIYQM 583
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 178/369 (48%), Gaps = 19/369 (5%)
Query: 75 RALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQV 134
R +++ L+ K L + + +H+ + +N + +DL I ++ + C A +V
Sbjct: 16 RRIFEERLQDLPKCANLNQVKQLHAQIIRRN--LHEDLHIAPKLISALSLCRQTNLAVRV 73
Query: 135 FDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
F+++ + S+I +AQN + A +F +M R G + + FT L+K C
Sbjct: 74 FNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA--DNFTYPFLLKACSGQS 131
Query: 195 SYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG--EAQAVFDELGRWKNEVSWNA 252
+ +H K G +++V ++L+D Y+RCG LG +A +F+++ ++ VSWN+
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE-RDTVSWNS 190
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
++ LF +M + +++ +L + + + L M +
Sbjct: 191 ML--GGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPE 244
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDR--LVKVDVVSCNSMLIGYAQHGFGKEAV 370
R V + +T++ Y+K+G + AR +FD+ L +VV+ ++ GYA+ G KEA
Sbjct: 245 --RNTVSW--STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
L QM+ G++ + +S+L AC+ +GLL G R ++++ + ++D+
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 431 GRAGLLDRA 439
+ G L +A
Sbjct: 361 AKCGNLKKA 369
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
+L Q K LH +++ ++ L+ + + A +VF+++ + +V CNS++
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
+AQ+ +A +F +M R G+ ++ T+ LL ACS L + + + G+
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 418 PKVSHYAKIVDLLGRAGLLD--RAMSFIEGMLIEPTAAIWGALLGA 461
+ ++D R G L AM E M T + W ++LG
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 263/485 (54%), Gaps = 14/485 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ PD+ + LLK + +L + + VH D D + + ++ Y++ +E
Sbjct: 156 GILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFD--SDCYVGSGLVTSYSKFMSVE 212
Query: 130 HARQVFDEMPNKD-TVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A++VFDE+P++D +V W +++ GY+Q R DAL++F M G G + T++S++
Sbjct: 213 DAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV--SRHTITSVLS 270
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ +GR +HG K G ++ V ++L+DMY + +L EA ++F+ + ++
Sbjct: 271 AFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDE-RDLF 329
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
+WN+++ LF +M G T + +L + + SL QG+ +HG
Sbjct: 330 TWNSVLCVHDYCGDHDGTLA--LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 309 HMLKSG---RKLVG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+M+ SG RK ++ N+L+ MY K G + DAR VFD + D S N M+ GY
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 447
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHY 423
G+ A+ +F M R G++P++ITF+ LL ACSH+G L+EG + Q+ + + P HY
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY 507
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
A ++D+LGRA L+ A I +W ++L + +H ++ A +++ EL+P
Sbjct: 508 ACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEP 567
Query: 484 FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHP 543
+ G +VL++N+Y AG+++E ++R M+ +KK P CSW+ ++N VH F + + HP
Sbjct: 568 EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHP 627
Query: 544 QKDKI 548
+ I
Sbjct: 628 EFKSI 632
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 195/404 (48%), Gaps = 23/404 (5%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK 141
L+ C + G+ +H F+++ + D S++ MYA+CG + A VF +
Sbjct: 67 LQRCAQRKDYVSGQQIHG-FMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 142 DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ 201
D + ++I+G+ N +DA+ + +M +G P+++T SL+K + D ++
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMR--ANGILPDKYTFPSLLKGSDAM-ELSDVKK 181
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX 261
VHG +K GF + +VGS LV Y++ + +AQ VFDEL + V WNAL+
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV--NGYSQ 239
Query: 262 XXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV 321
+F+KM+ EG GV+ T +++L + + G ++ G+ +HG +K+G V
Sbjct: 240 IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 322 GNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
N L+ MY KS + +A +F+ + + D+ + NS+L + G + LF++ML GI
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH----YAKIVDLLGRAGLLD 437
P+ +T ++L C L +G M G+ + S + ++D+ + G L
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLR 419
Query: 438 RAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
A + M ++ + ASW I + Y Q EL
Sbjct: 420 DARMVFDSMRVKDS---------ASW---NIMINGYGVQSCGEL 451
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNV-FVGSSLVDMYARCGFLGEAQAV 237
N T + ++ C Y G+Q+HG + GF D+ G+SLV+MYA+CG + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
F G ++ +NALI + +M+ G ++T+ +LL S
Sbjct: 119 FG--GSERDVFGYNALISGFVVNGSPLDAMET--YREMRANGILPDKYTFPSLL-KGSDA 173
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-KVDVVSCNSM 356
L K +HG K G YVG+ L+ Y+K S+ DA+KVFD L + D V N++
Sbjct: 174 MELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+ GY+Q ++A+++F +M +G+ + T S+L+A + +G +D G L + G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+ ++D+ G++ L+ A S E M
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 275/514 (53%), Gaps = 13/514 (2%)
Query: 53 LRRSKTGLHVLDLID-RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDD 111
+R KT +L L++ + AV D + LL + VH+ L ++ +
Sbjct: 180 VRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVL--KLGLQHE 237
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMP-NKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+ I N+++ YA CG + A++VFD + +KD ++W SMI G++++E A LF M
Sbjct: 238 ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR--C 228
R + +T + L+ C G+ +HG K G ++L+ MY +
Sbjct: 298 R--HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
G + +A ++F+ L + K+ +SWN++I F+ ++ V ++ +S
Sbjct: 356 GTMEDALSLFESL-KSKDLISWNSIITGFAQKGLSEDAVK--FFSYLRSSEIKVDDYAFS 412
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-K 347
ALL S S + +L+ G+ +H KSG +V ++L+ MY+K G I ARK F ++ K
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
V+ N+M++GYAQHG G+ ++ LF QM ++ + +TF ++LTACSH GL+ EG
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Query: 408 FQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHK 466
LM + ++P++ HYA VDLLGRAGL+++A IE M + P + LG
Sbjct: 533 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 592
Query: 467 KIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
+IEM A + E++P +V L+++Y+ +W+E A+++KMMK+ G+KK P SW+
Sbjct: 593 EIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Query: 527 EIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIK 560
EI N V F + D ++P I M + L QE++
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 173/339 (51%), Gaps = 7/339 (2%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
D+ + N +L Y + G L +A +FDEMP +D+V+W +MI+GY + DA LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
R SGS + ++ S L+K + + G QVHG K G+ NV+VGSSLVDMYA+C
Sbjct: 94 R--SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
+ +A F E+ N VSWNALI +M + + T++ L
Sbjct: 152 VEDAFEAFKEISE-PNSVSWNALIAGFVQVRDIKTAFWLLGLMEM-KAAVTMDAGTFAPL 209
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVD 349
L K +H +LK G + + N ++ YA GS+SDA++VFD L D
Sbjct: 210 LTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKD 269
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
++S NSM+ G+++H + A LF QM R +E + T+ LL+ACS G+
Sbjct: 270 LISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 410 LMRQFGVEPKVSHYAKIVDLLGR--AGLLDRAMSFIEGM 446
++ + G+E S ++ + + G ++ A+S E +
Sbjct: 330 MVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 4/187 (2%)
Query: 208 KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXX 267
K G +++V + ++D Y + GFLG A +FDE+ + ++ VSWN +I
Sbjct: 28 KCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPK-RDSVSWNTMISGYTSCGKLEDAW 86
Query: 268 XXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLH 327
LF M+R G V +++S LL +SV + G+ +HG ++K G + YVG++L+
Sbjct: 87 C--LFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 328 MYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM-LRDGIEPNDI 386
MYAK + DA + F + + + VS N+++ G+ Q K A L M ++ + +
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAG 204
Query: 387 TFLSLLT 393
TF LLT
Sbjct: 205 TFAPLLT 211
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 13/191 (6%)
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H + +K G YV N +L Y K G + A +FD + K D VS N+M+ GY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
++A LF M R G + + +F LL + D GE+ L+ + G E V + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 427 VDLLGRAGLLDRAM-SFIEGMLIEPTAAIWGALLG----------ASWMHKKIEMGAYAA 475
VD+ + ++ A +F E + EP + W AL+ A W+ +EM A
Sbjct: 143 VDMYAKCERVEDAFEAFKE--ISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 476 QKVFELDPFYS 486
P +
Sbjct: 201 MDAGTFAPLLT 211
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 263/496 (53%), Gaps = 11/496 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ PD+ + L + L GR++H + DV D+ ++ +++ MY +CG E
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV--DMHLKTALITMYLKCGKEE 297
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+ +V + +PNKD V WT MI+G + RA AL++F +ML+ SGS + ++S+V
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ--SGSDLSSEAIASVVAS 355
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C + S+ G VHG +HG+ + +SL+ MYA+CG L ++ +F+ + ++ VS
Sbjct: 356 CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNE-RDLVS 414
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQ-REGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
WNA+I LF +M+ + V FT +LL + SS G+L GK +H
Sbjct: 415 WNAIISGYAQNVDLCKALL--LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHC 472
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+++S + V L+ MY+K G + A++ FD + DVVS ++ GY HG G
Sbjct: 473 IVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDI 532
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIV 427
A+ ++ + L G+EPN + FL++L++CSH G++ +G + F M R FGVEP H A +V
Sbjct: 533 ALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVV 592
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
DLL RA ++ A F + P+ + G +L A + K E+ + + EL P +G
Sbjct: 593 DLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAG 652
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
+V L + +A+ RW + + M+ GLKK P S +E+ F N +H D
Sbjct: 653 HYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDD 710
Query: 548 IIKMWEKLNQEIKEIG 563
+ + + L++E+ + G
Sbjct: 711 TVSLLKLLSREMMQFG 726
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 11/387 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + LLK C L +L G +H L+ D I +S++ +YA+ G L HAR
Sbjct: 44 PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNG--FSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+VF+EM +D V WT+MI Y++ +A L +M G +P TL ++
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF--QGIKPGPVTLLEMLSGVLE 159
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
I + +H +GF ++ V +S++++Y +C +G+A+ +FD++ + ++ VSWN
Sbjct: 160 ITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ-RDMVSWNT 215
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I L +M+ +G + T+ A L + ++ LE G+ LH ++K
Sbjct: 216 MISGYASVGNMSEILK--LLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK 273
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
+G + ++ L+ MY K G + +V + + DVV M+ G + G ++A+++
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 373 FKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGR 432
F +ML+ G + + S++ +C+ G D G + + G ++ + +
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAK 393
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALL 459
G LD+++ E M E W A++
Sbjct: 394 CGHLDKSLVIFERM-NERDLVSWNAII 419
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 278/529 (52%), Gaps = 43/529 (8%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R V PDR + L+K + L ++++ +H H ++ + + NS++ Y G+
Sbjct: 126 RHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGN-YLWNSLVKFYMELGN 181
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
A +VF MP+ D ++ MI GYA+ +++AL L+ M+ G P+E+T+ SL+
Sbjct: 182 FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMV--SDGIEPDEYTVLSLL 239
Query: 188 KCCGLIPSYGDGRQVHGCCWKHG--FCDNVFVGSSLVDMYARC----------------- 228
CCG + G+ VHG + G + N+ + ++L+DMY +C
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKD 299
Query: 229 ---------GF--LGE---AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
GF LG+ AQAVFD++ + ++ VSWN+L+ +
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPK-RDLVSWNSLLFGYSKKGCDQRTVRELFYEM 358
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
E T +L+ A++ G L G+W+HG +++ K ++ + L+ MY K G
Sbjct: 359 TIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGI 418
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
I A VF + DV SM+ G A HG G++A+ LF +M +G+ PN++T L++LTA
Sbjct: 419 IERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTA 478
Query: 395 CSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE-GMLIEPTA 452
CSH+GL++EG F M+ +FG +P+ HY +VDLL RAG ++ A ++ M + P+
Sbjct: 479 CSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQ 538
Query: 453 AIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMM 512
++WG++L A + IE A ++ +L+P G +VLL+NIYA+ GRW + R+ M
Sbjct: 539 SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAM 598
Query: 513 KDSGLKKEPACSWVEIENSVHVFVSNDIA-HPQKDKIIKMWEKLNQEIK 560
++ G+KK S V +H FV+ + HP+ +I ++ + L E+K
Sbjct: 599 ENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG-RKLVGYVGNTLLHMY 329
L++ M R T+ L+ ++S + ++Q +H H++ SG L Y+ N+L+ Y
Sbjct: 120 LYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFY 176
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
+ G+ A KVF R+ DV S N M++GYA+ GF EA+ L+ +M+ DGIEP++ T L
Sbjct: 177 MELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVL 236
Query: 390 SLLTACSH 397
SLL C H
Sbjct: 237 SLLVCCGH 244
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 162/377 (42%), Gaps = 50/377 (13%)
Query: 127 DLEHARQVF-DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
+L+ A+ +F + PN + + +MI+ + ++ + L+ M+R P+ T
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIR--HRVSPDRQTFLY 138
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNV--FVGSSLVDMYARCGFLGEAQAVFDELGR 243
L+K + + +Q+H C C ++ ++ +SLV Y G G A+ VF +
Sbjct: 139 LMKASSFL---SEVKQIH-CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPH 194
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+ S+N +I L+ KM +G E+T +LL + + G
Sbjct: 195 -PDVSSFNVMIVGYAKQGFSLEALK--LYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Query: 304 KWLHGHMLKSGRKLVG--YVGNTLLHMYAKS----------------------------- 332
K +HG + + G + N LL MY K
Sbjct: 252 KGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
Query: 333 --GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV--VLFKQMLRDGIEPNDITF 388
G + A+ VFD++ K D+VS NS+L GY++ G + V + ++ + + ++P+ +T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 389 LSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
+SL++ ++ G L G L+ + ++ + ++D+ + G+++RA +
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFK-TAT 430
Query: 449 EPTAAIWGALLGASWMH 465
E A+W +++ H
Sbjct: 431 EKDVALWTSMITGLAFH 447
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/608 (28%), Positives = 278/608 (45%), Gaps = 87/608 (14%)
Query: 35 DNVPELDKSYYIIDDRNLLRRSKTGLH-----VLDLIDRGAVEPDRALYQRLLKTCTKLG 89
D +PELD + + L S+ GLH + + +PD + +L TC LG
Sbjct: 28 DGMPELDTVAW---NTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLG 84
Query: 90 KLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD---------------------- 127
++ GR + S L+ L + NS++ MY +C D
Sbjct: 85 NVKFGRKIQS--LVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWC 142
Query: 128 -----------LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
E A VF EMP + W MI+G+A + L LF +ML S
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE--SEF 200
Query: 177 RPNEFTLSSLVKCCGLIPS-YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR-------- 227
+P+ +T SSL+ C S GR VH K+G+ V +S++ Y +
Sbjct: 201 KPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAM 260
Query: 228 --------------------CGFLGEAQAVFD--ELGRWKNEVSWNALIXXXXXXXXXXX 265
C +GE + + L KN V+W +I
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
F +M + G F Y A+L + S + L GK +HG ++ G + YVGN L
Sbjct: 321 ALR--FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 326 LHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
+++YAK G I +A + F + D+VS N+ML + HG +A+ L+ M+ GI+P++
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLL----DRAM 440
+TF+ LLT CSH+GL++EG F+ M + + + +V H ++D+ GR G L D A
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 441 SFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAG 500
++ + + W LLGA H E+G ++ + +P + VLL+N+Y S G
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTG 558
Query: 501 RWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIK 560
RWKE ++R+ M + G+KK P CSW+E+ N V FV D +HP+ +++ + L E++
Sbjct: 559 RWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Query: 561 EIGYVPDT 568
P+T
Sbjct: 619 N----PET 622
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 182/420 (43%), Gaps = 73/420 (17%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
LV S + A+ G + ARQVFD MP DTV W +M+T Y++ +A+ LF +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
S ++P++++ ++++ C + + GR++ + GFC ++ V +SL+DMY +C
Sbjct: 64 --SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 232 GEAQAVF-DELGRWKNEVSWNALIXXXXXXXXXXXX------------------------ 266
A VF D +NEV+W +L+
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 267 -----XXXXLFAKMQREGYGVTEFTYSALL--CSASSVGSLEQGKWLHGHMLKSGRKLVG 319
LF +M + +T+S+L+ CSA S ++ G+ +H MLK+G
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADS-SNVVYGRMVHAVMLKNGWSSAV 240
Query: 320 YVGNTLLHMYAKSGSISDARK---------------VFDRLVKV---------------- 348
N++L Y K GS DA + + D +K+
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
++V+ +M+ GY ++G G++A+ F +M++ G++ + + ++L ACS LL G+
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLL---DRAMSFIEGMLIEPTAAIWGALLGASWMH 465
+ G + +V+L + G + DRA G + W +L A +H
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF----GDIANKDLVSWNTMLFAFGVH 416
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
AKSG I+ AR+VFD + ++D V+ N+ML Y++ G +EA+ LF Q+ +P+D +F
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
++L+ C+ G + G + L+ + G + ++D+ G+ A M +
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 450 PTAAI-WGALLGASWMHKKIEMGAYAAQKVF-ELDPFYSGAHVLLANIYASAGRWKEAAN 507
+ W +LL A ++ E AA VF E+ + A ++ + +A G+ + +
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFE----AALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 508 IRKMMKDSGLKKEPAC 523
+ K M +S K P C
Sbjct: 191 LFKEMLESEFK--PDC 204
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 264/531 (49%), Gaps = 37/531 (6%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
+L+ +G V PD +L C +L L G+ +HS ++L++ + +D + N+++ YA
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS-YILRHSYLLEDTSVGNALISFYA 377
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
R GD A F M KD ++W +++ +A + + L + T+
Sbjct: 378 RFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQ--FLNLLHHLLNEAITLDSVTI 435
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFC---DNVFVGSSLVDMYARCGFLGEAQAVFDE 240
SL+K C + G ++VHG K G + +G++L+D YA+CG + A +F
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXX-----------------------------L 271
L + VS+N+L+ +
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 272 FAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAK 331
F ++Q G T LL + + SL + HG++++ G + G TLL +YAK
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG-TLLDVYAK 614
Query: 332 SGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
GS+ A VF + D+V +M+ GYA HG GKEA++++ M I+P+ + ++
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 392 LTACSHAGLLDEGERYFQLMRQF-GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
LTAC HAGL+ +G + + +R G++P + YA VDL+ R G LD A SF+ M +EP
Sbjct: 675 LTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEP 734
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRK 510
A IWG LL A + ++++G A + + + +G HVL++N+YA+ +W+ +R
Sbjct: 735 NANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRN 794
Query: 511 MMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
+MK +KK CSW+E++ +VFVS D +HP++D I + L ++KE
Sbjct: 795 LMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 168/378 (44%), Gaps = 48/378 (12%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGK---LREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
L+ + EP+ A +L C + K R GR +HS +++Q ++ + + NS++
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS-YVVQRSWLQTHVFVCNSLVSF 272
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y R G +E A +F M +KD V+W +I GYA N A LF +++ G S P+
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS-PDSV 331
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
T+ S++ C + G+++H +H + ++ VG++L+ YAR G A F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAF-S 390
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
L K+ +SWNA++ + E + T +LL +V +
Sbjct: 391 LMSTKDIISWNAILDAFADSPKQFQFLNLL--HHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 301 EQGKWLHGHMLKSG-------------------------------------RKLVGYVGN 323
+ K +HG+ +K+G R LV Y N
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSY--N 506
Query: 324 TLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
+LL Y SGS DA+ +F + D+ + + M+ YA+ EA+ +F+++ G+ P
Sbjct: 507 SLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Query: 384 NDITFLSLLTACSHAGLL 401
N +T ++LL C+ L
Sbjct: 567 NTVTIMNLLPVCAQLASL 584
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 211/461 (45%), Gaps = 28/461 (6%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL-EH 130
+P + +L C +LG G+ +HS+ + + D ++ N+++ MYA+ G +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYII--KAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A FD + +KD V+W ++I G+++N DA F ML+ + PN T+++++ C
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK--EPTEPNYATIANVLPVC 234
Query: 191 GLIP---SYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ + GRQ+H + + +VFV +SLV Y R G + EA ++F +G K+
Sbjct: 235 ASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS-KD 293
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG-YGVTEFTYSALLCSASSVGSLEQGKW 305
VSWN +I LF + +G T ++L + + L GK
Sbjct: 294 LVSWNVVI--AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKE 351
Query: 306 LHGHMLKSGRKLVGY-VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H ++L+ L VGN L+ YA+ G S A F + D++S N++L +A
Sbjct: 352 IHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSP 411
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV-----EPK 419
+ + L +L + I + +T LSLL C + + + + + G+ EPK
Sbjct: 412 KQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK 471
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY-AAQKV 478
+ + ++D + G ++ A G+ T + +LL + G++ AQ +
Sbjct: 472 LGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG-----YVNSGSHDDAQML 524
Query: 479 F-ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
F E+ L+ IYA + EA + + ++ G++
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 184/400 (46%), Gaps = 25/400 (6%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSH-FLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
D ++ ++K C + L GR +H F L + + + SVL MYA+C ++ +
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSE---VSKSVLNMYAKCRRMDDCQ 76
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
++F +M + D V W ++TG + + + F + +P+ T + ++ C
Sbjct: 77 KMFRQMDSLDPVVWNIVLTGLSVS--CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL-GEAQAVFDELGRWKNEVSWN 251
+ +G+ +H K G + VG++LV MYA+ GF+ +A FD + K+ VSWN
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIAD-KDVVSWN 193
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ------GKW 305
A+I F M +E TE Y+ + S+++ G+
Sbjct: 194 AIIAGFSENNMMADAFRS--FCLMLKEP---TEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 306 LHGHML-KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H +++ +S + +V N+L+ Y + G I +A +F R+ D+VS N ++ GYA +
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 365 FGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEG-ERYFQLMRQFGVEPKVSH 422
+A LF ++ G + P+ +T +S+L C+ L G E + ++R + S
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSV 368
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI-WGALLGA 461
++ R G D + ++ L+ I W A+L A
Sbjct: 369 GNALISFYARFG--DTSAAYWAFSLMSTKDIISWNAILDA 406
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 6/233 (2%)
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
F R SG + +VK C + GR +HGC +K G V S+++MY
Sbjct: 7 FVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMY 66
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ-REGYGVTE 284
A+C + + Q +F ++ + V WN ++ F M + +
Sbjct: 67 AKCRRMDDCQKMFRQMDSL-DPVVWNIVL---TGLSVSCGRETMRFFKAMHFADEPKPSS 122
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSI-SDARKVFD 343
T++ +L +G GK +H +++K+G + VGN L+ MYAK G I DA FD
Sbjct: 123 VTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFD 182
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
+ DVVS N+++ G++++ +A F ML++ EPN T ++L C+
Sbjct: 183 GIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 124/323 (38%), Gaps = 50/323 (15%)
Query: 278 EGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
G+G + ++ + +SV L G+ LHG + K G V ++L+MYAK + D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM-LRDGIEPNDITFLSLLTACS 396
+K+F ++ +D V N +L G + G+E + FK M D +P+ +TF +L C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 397 HAGLLDEGERYFQLMRQFGVEPK-------VSHYAKIVDLLGRA-----GLLDRAM---- 440
G G+ + + G+E VS YAK + A G+ D+ +
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 441 SFIEG----------------MLIEPT----AAIWGALLGASWMHKKIEMGAYAAQKVFE 480
+ I G ML EPT A I L + M K I + +
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 481 LDPFYSGAHVLLAN----IYASAGRWKEAANIRKMMKDSGLKK--------EPACSWVEI 528
+ + HV + N Y GR +EAA++ M L C W +
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 529 ENSVHVFVSNDIAHPQKDKIIKM 551
H V P II +
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISI 336
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 247/470 (52%), Gaps = 17/470 (3%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R PD + +LK C+ L ++ G VH + +V ++ + +L MY CG+
Sbjct: 100 RKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV--NMYVSTCLLHMYMCCGE 157
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ + +VF+++P + V W S+I+G+ N R DA+ F +M +G + NE + L+
Sbjct: 158 VNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREM--QSNGVKANETIMVDLL 215
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCD--------NVFVGSSLVDMYARCGFLGEAQAVFD 239
CG G+ HG GF NV + +SL+DMYA+CG L A+ +FD
Sbjct: 216 VACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFD 275
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
+ + VSWN++I +F M G + T+ +++ ++ G
Sbjct: 276 GMPE-RTLVSWNSIITGYSQNGDAEEALC--MFLDMLDLGIAPDKVTFLSVIRASMIQGC 332
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
+ G+ +H ++ K+G + L++MYAK+G A+K F+ L K D ++ ++IG
Sbjct: 333 SQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIG 392
Query: 360 YAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF-GVE 417
A HG G EA+ +F++M G P+ IT+L +L ACSH GL++EG+RYF MR G+E
Sbjct: 393 LASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK 477
P V HY +VD+L RAG + A ++ M ++P IWGALL +H+ +E+
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSM 512
Query: 478 VFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
V E + SG +VLL+NIYA AGRW + IR+ MK + K S VE
Sbjct: 513 VAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 187/431 (43%), Gaps = 50/431 (11%)
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
+L +AR VF+ + W SMI GY+ + AL+ + +MLR G P+ FT +
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR--KGYSPDYFTFPYV 113
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+K C + G VHG K GF N++V + L+ MY CG + VF+++ +W N
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW-N 172
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
V+W +LI F +MQ G E LL + + GKW
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEA--FREMQSNGVKANETIMVDLLVACGRCKDIVTGKWF 230
Query: 307 HGHMLKSG-----RKLVGY---VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
HG + G + VG+ + +L+ MYAK G + AR +FD + + +VS NS++
Sbjct: 231 HGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP 418
GY+Q+G +EA+ +F ML GI P+ +TFLS++ A G G+ + + G
Sbjct: 291 GYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK 350
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG----------ASWMHKKI 468
+ +V++ + G + A E + + T A ++G S +
Sbjct: 351 DAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQ 410
Query: 469 EMGAYAAQKVFELDPFYSGAHV---------------------------LLANIYASAGR 501
E G + L Y+ +H+ + +I + AGR
Sbjct: 411 EKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGR 470
Query: 502 WKEAANIRKMM 512
++EA + K M
Sbjct: 471 FEEAERLVKTM 481
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 132/288 (45%), Gaps = 19/288 (6%)
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG---FLGEAQAVFD 239
LS L C L+ + Q+HG K NV S L+D C L A++VF+
Sbjct: 10 LSQLENCRSLV----ELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGS 299
+ + WN++I + +M R+GY FT+ +L + S +
Sbjct: 66 SID-CPSVYIWNSMIRGYSNSPNPDKALI--FYQEMLRKGYSPDYFTFPYVLKACSGLRD 122
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
++ G +HG ++K+G ++ YV LLHMY G ++ +VF+ + + +VV+ S++ G
Sbjct: 123 IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISG 182
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP- 418
+ + +A+ F++M +G++ N+ + LL AC + G+ + ++ G +P
Sbjct: 183 FVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY 242
Query: 419 -------KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
V ++D+ + G L A +GM E T W +++
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGM-PERTLVSWNSII 289
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 264/507 (52%), Gaps = 21/507 (4%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R VE D + ++ TC L+ R +H L L + N ++ Y++CG
Sbjct: 269 REGVELDHVSFTSVITTCCHETDLKLARQIHG--LCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
LE + VF +M ++ V+WT+MI+ DA+ +F +M G PNE T L+
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRF--DGVYPNEVTFVGLI 379
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
+G ++HG C K GF VG+S + +YA+ L +A+ F+++ ++
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI-TFREI 438
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVG--SLEQGKW 305
+SWNA+I L A + E+T+ ++L + + S++QG+
Sbjct: 439 ISWNAMISGFAQNGFSHEALKMFLSAAAETMP---NEYTFGSVLNAIAFAEDISVKQGQR 495
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
H H+LK G V + LL MYAK G+I ++ KVF+ + + + S++ Y+ HG
Sbjct: 496 CHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGD 555
Query: 366 GKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYA 424
+ + LF +M+++ + P+ +TFLS+LTAC+ G++D+G F +M + + +EP HY+
Sbjct: 556 FETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYS 615
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPF 484
+VD+LGRAG L A + + P ++ ++LG+ +H ++MGA A+ E+ P
Sbjct: 616 CMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPE 675
Query: 485 YSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIEN-----SVHVFVSND 539
SG++V + NIYA W +AA IRK M+ + KE SW+++ + ++ F S D
Sbjct: 676 LSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGD 735
Query: 540 IAHPQKDKIIKMWEKLNQEIKEIGYVP 566
+HP+ D+I +M E + E+ G V
Sbjct: 736 KSHPKSDEIYRMVEIIGLEMNLEGKVA 762
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 191/367 (52%), Gaps = 19/367 (5%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNER-AVDALVLF 166
+ DLV+ NS + MY+R G AR+VFDEM KD ++W S+++G +Q +A+V+F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
DM+R G + + +S++ C RQ+HG C K G+ + VG+ L+ Y+
Sbjct: 265 RDMMR--EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYS 322
Query: 227 RCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
+CG L ++VF ++ +N VSW +I +F M+ +G E T
Sbjct: 323 KCGVLEAVKSVFHQMSE-RNVVSWTTMI-------SSNKDDAVSIFLNMRFDGVYPNEVT 374
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
+ L+ + +++G +HG +K+G VGN+ + +YAK ++ DA+K F+ +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD--EG 404
+++S N+M+ G+AQ+GF EA+ +F + + PN+ TF S+L A + A + +G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG 493
Query: 405 ERYFQLMRQFGVE--PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS 462
+R + + G+ P VS + ++D+ + G +D + M + +W +++ A
Sbjct: 494 QRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEM-SQKNQFVWTSIISAY 550
Query: 463 WMHKKIE 469
H E
Sbjct: 551 SSHGDFE 557
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 203/449 (45%), Gaps = 27/449 (6%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK 141
LK C G L+ G +H + + N+V+ MY + G ++A +F+ + +
Sbjct: 85 LKACR--GDLKRGCQIHG--FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 142 DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ 201
D V+W ++++G+ N+ A++ +V +G + FT S+ + C + G Q
Sbjct: 141 DVVSWNTILSGFDDNQIALNFVVRMKS-----AGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX 261
+ K G ++ VG+S + MY+R G A+ VFDE+ +K+ +SWN+L+
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-FKDMISWNSLL-SGLSQE 253
Query: 262 XXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV 321
+F M REG + ++++++ + L+ + +HG +K G + + V
Sbjct: 254 GTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV 313
Query: 322 GNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
GN L+ Y+K G + + VF ++ + +VVS +M+ +AV +F M DG+
Sbjct: 314 GNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGV 368
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV--EPKVSHYAKIVDLLGRAGLLDRA 439
PN++TF+ L+ A + EG + L + G EP V + + L + L+ A
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEALEDA 426
Query: 440 MSFIEGMLIEPTAAIWGALLGA----SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANI 495
E + + W A++ + H+ ++M AA + + Y+ VL A
Sbjct: 427 KKAFEDITFREIIS-WNAMISGFAQNGFSHEALKMFLSAAAETMPNE--YTFGSVLNAIA 483
Query: 496 YASAGRWKEAANIRKMMKDSGLKKEPACS 524
+A K+ + GL P S
Sbjct: 484 FAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 177/405 (43%), Gaps = 36/405 (8%)
Query: 131 ARQVFDEMPNKD-TVTWTSMITGYAQNERAVDALVLFPDMLR-GGSGSRPNEFTLSSLVK 188
A ++FD ++ T + I+ + AL +F + L+ G G +E TL +K
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 189 CCGLIPSYGD---GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
C GD G Q+HG GF V V ++++ MY + G A +F+ L
Sbjct: 87 AC-----RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD-P 140
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ VSWN ++ +M+ G FTYS L G
Sbjct: 141 DVVSWNTILSGFDDNQIALN-----FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG- 364
L ++K+G + VGN+ + MY++SGS AR+VFD + D++S NS+L G +Q G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
FG EAVV+F+ M+R+G+E + ++F S++T C H L + L + G E +
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS-------WMHKKIEMGAYAAQK 477
++ + G+L+ S M E W ++ ++ +++ + + G Y +
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQM-SERNVVSWTTMISSNKDDAVSIFLNMRFD-GVYPNEV 373
Query: 478 VFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
F V L N + KE I + +G EP+
Sbjct: 374 TF----------VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 263/452 (58%), Gaps = 19/452 (4%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
EP+ ++ LL+TC L + G V H L+ +R++L I + ++ +YA CG E
Sbjct: 90 TEPE--IFASLLETCYSLRAIDHG--VRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 131 ARQVFDEMPNKDT--VTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A +VFD M +D+ W S+I+GYA+ + DA+ L+ M G +P+ FT ++K
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE--DGVKPDRFTFPRVLK 203
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
CG I S G +H K GF +V+V ++LV MYA+CG + +A+ VFD + K+ V
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH-KDYV 262
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWN+++ +F M + G + S++L + V S + G+ LHG
Sbjct: 263 SWNSMLTGYLHHGLLHEALD--IFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHG 317
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+++ G + V N L+ +Y+K G + A +FD++++ D VS N+++ ++++ G
Sbjct: 318 WVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG-- 375
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIV 427
+ F+QM R +P+ ITF+S+L+ C++ G++++GER F LM +++G++PK+ HYA +V
Sbjct: 376 -LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMV 434
Query: 428 DLLGRAGLLDRAMSFI-EGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
+L GRAG+++ A S I + M +E +WGALL A ++H ++G AAQ++FEL+P
Sbjct: 435 NLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNE 494
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
LL IY+ A R ++ +R+MM D GL+
Sbjct: 495 HNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 145/292 (49%), Gaps = 9/292 (3%)
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
+G S + P F +SL++ C + + G +VH + +N+ + S LV +YA CG+
Sbjct: 85 KGISLTEPEIF--ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGY 142
Query: 231 LGEAQAVFDELG-RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
A VFD + R + +WN+LI L+ +M +G FT+
Sbjct: 143 AEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMA--LYFQMAEDGVKPDRFTFPR 200
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
+L + +GS++ G+ +H ++K G YV N L+ MYAK G I AR VFD + D
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
VS NSML GY HG EA+ +F+ M+++GIEP+ + S+L G +
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHG 317
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
+ + G+E ++S ++ L + G L +A FI ++E W A++ A
Sbjct: 318 WVIRRGMEWELSVANALIVLYSKRGQLGQA-CFIFDQMLERDTVSWNAIISA 368
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 270/533 (50%), Gaps = 45/533 (8%)
Query: 70 AVEPDRALYQRLLKTCTK-----LGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
A PD +LK + LG L R VH + D D+ + N ++ Y +
Sbjct: 124 AARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIRGGFD--SDVFVGNGMITYYTK 179
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
C ++E AR+VFDEM +D V+W SMI+GY+Q+ D ++ ML S +PN T+
Sbjct: 180 CDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAML-ACSDFKPNGVTVI 238
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
S+ + CG G +VH ++ ++ + ++++ YA+CG L A+A+FDE+
Sbjct: 239 SVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE- 297
Query: 245 KNEVS-------------------------------WNALIXXXXXXXXXXXXXXXXLFA 273
K+ V+ WNA+I F
Sbjct: 298 KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS--FR 355
Query: 274 KMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSG 333
+M R G T S+LL S + +L+ GK +H +++G YV +++ YAK G
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 334 SISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
+ A++VFD +++ +++ YA HG A LF QM G +P+D+T ++L+
Sbjct: 416 FLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Query: 394 ACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA 452
A +H+G D + F ++ ++ +EP V HYA +V +L RAG L AM FI M I+P A
Sbjct: 476 AFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIA 535
Query: 453 AIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMM 512
+WGALL + + +E+ +A ++FE++P +G + ++AN+Y AGRW+EA +R M
Sbjct: 536 KVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKM 595
Query: 513 KDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYV 565
K GLKK P SW+E E + F++ D + + ++ ++ E L + + + Y+
Sbjct: 596 KRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 170/401 (42%), Gaps = 51/401 (12%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFP 167
++ D + + ++ Y R A VFDE+ ++ ++ +++ Y E DA LF
Sbjct: 53 IKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFL 112
Query: 168 DML----RGGSGSRPNEFTLSSLVKCCGLIPSYGDG---RQVHGCCWKHGFCDNVFVGSS 220
+ +RP+ ++S ++K + G RQVHG + GF +VFVG+
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNG 172
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
++ Y +C + A+ VFDE+ ++ VSWN++I KM +
Sbjct: 173 MITYYTKCDNIESARKVFDEMSE-RDVVSWNSMISGYSQSGSFEDCK------KMYKAML 225
Query: 281 GVTEF-----TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSI 335
++F T ++ + L G +H M+++ ++ + N ++ YAK GS+
Sbjct: 226 ACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL 285
Query: 336 SDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL----------------------- 372
AR +FD + + D V+ +++ GY HG KEA+ L
Sbjct: 286 DYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNN 345
Query: 373 --------FKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
F++M+R G PN +T SLL + +++ L G+ + G + +
Sbjct: 346 HHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTT 405
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
I+D + G L A + A W A++ A +H
Sbjct: 406 SIIDNYAKLGFLLGAQRVFDNCKDRSLIA-WTAIITAYAVH 445
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/484 (33%), Positives = 265/484 (54%), Gaps = 18/484 (3%)
Query: 54 RRSKTGLH-----VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDV 108
R S+ G H + + R V+ ++ Y +LK+C LG L+EG +H ++ +
Sbjct: 87 RFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS--VEKGNC 144
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
+L++++++L +YARCG +E AR FD M +D V+W +MI GY N A + LF
Sbjct: 145 AGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
ML G +P+ FT SL++ ++ ++HG K GF + + SLV+ Y +C
Sbjct: 205 MLT--EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKC 262
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
G L A + E + ++ +S ALI +F M R + E S
Sbjct: 263 GSLANAWKLH-EGTKKRDLLSCTALITGFSQQNNCTSDAFD-IFKDMIRMKTKMDEVVVS 320
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGR-KLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
++L +++ S+ G+ +HG LKS + + +GN+L+ MYAKSG I DA F+ + +
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE 380
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER- 406
DV S S++ GY +HG ++A+ L+ +M + I+PND+TFLSLL+ACSH G + G +
Sbjct: 381 KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKI 440
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI---EGMLIEPTAAIWGALLGASW 463
Y ++ + G+E + H + I+D+L R+G L+ A + I EG ++ +++ WGA L A
Sbjct: 441 YDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEG-IVSLSSSTWGAFLDACR 499
Query: 464 MHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG-LKKEPA 522
H +++ AA ++ ++P ++ LA++YA+ G W A N RK+MK+SG K P
Sbjct: 500 RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPG 559
Query: 523 CSWV 526
S V
Sbjct: 560 YSLV 563
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 204/396 (51%), Gaps = 10/396 (2%)
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
+LY + LK C+ ++ L+H + + +L +++ ++ +Y + GD++HAR++F
Sbjct: 13 SLYLKALKLCSYQNVKKQLLLIHGNSITNG--FCSNLQLKDMLIDLYLKQGDVKHARKLF 70
Query: 136 DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPS 195
D + +D V+WT+MI+ +++ DAL+LF +M R + N+FT S++K C +
Sbjct: 71 DRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR--EDVKANQFTYGSVLKSCKDLGC 128
Query: 196 YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIX 255
+G Q+HG K N+ V S+L+ +YARCG + EA+ FD + + ++ VSWNA+I
Sbjct: 129 LKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSM-KERDLVSWNAMI- 186
Query: 256 XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR 315
LF M EG FT+ +LL ++ V LE LHG +K G
Sbjct: 187 -DGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF 245
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA-QHGFGKEAVVLFK 374
+ +L++ Y K GS+++A K+ + K D++SC +++ G++ Q+ +A +FK
Sbjct: 246 GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 305
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQL-MRQFGVEPKVSHYAKIVDLLGRA 433
M+R + +++ S+L C+ + G + ++ + V+ ++D+ ++
Sbjct: 306 DMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKS 365
Query: 434 GLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
G ++ A+ E M E W +L+ H E
Sbjct: 366 GEIEDAVLAFEEM-KEKDVRSWTSLIAGYGRHGNFE 400
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 254/511 (49%), Gaps = 74/511 (14%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
++V S+++ Y R GD+ A ++F EMP ++ V+WT+MI+G+A NE +AL+LF +M
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 171 RGGSGSRPNEFTLSSLVKCCGL--IPSYGDGRQVHGCCWKHGFCD---NVFVGSSLVDMY 225
+ PN TL SL CG + G Q+H +G+ + + SLV MY
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 226 ARCGFLGEAQAV-----------------------------FDELGRWKNEVSWNALI-- 254
A G + AQ++ F+ + ++VSW ++I
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 255 ---------------------------XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
L + M R G TY
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTY 469
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGR----KLVGYVGNTLLHMYAKSGSISDARKVFD 343
S LL SA + +L+QGK +H + K+ L+ + N+L+ MYAK G+I DA ++F
Sbjct: 470 SVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLI--LQNSLVSMYAKCGAIEDAYEIFA 527
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
++V+ D VS NSM++G + HG +A+ LFK+ML G +PN +TFL +L+ACSH+GL+
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 404 GERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL--- 459
G F+ M++ + ++P + HY ++DLLGRAG L A FI + P ++GALL
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLC 647
Query: 460 GASWMHKKIE-MGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
G +W K E + AA ++ ELDP + HV L N+YA GR +RK M G+K
Sbjct: 648 GLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVK 707
Query: 519 KEPACSWVEIENSVHVFVSNDIAHPQKDKII 549
K P CSWV + +VF+S D + + +++
Sbjct: 708 KTPGCSWVVVNGRANVFLSGDKSASEAAQMV 738
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 236/545 (43%), Gaps = 75/545 (13%)
Query: 13 KLVQRHSVTLRRLWQTAISDDNDNVPELD--KSYYIIDDRNLLRR-SKTGL----HVLDL 65
KL R S++ RR + D +P + + ++ +LRR S+ GL H+LD
Sbjct: 15 KLSLRSSISCRRYY-------GDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDK 67
Query: 66 I-DRGAVEPDRALY-QRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
I RG++ +R +Y LL K G L E R++ +N +V N++L Y
Sbjct: 68 IPQRGSI--NRVVYWTSLLSKYAKTGYLDEARVLFEVMPERN------IVTCNAMLTGYV 119
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM-------------- 169
+C + A +F EMP K+ V+WT M+T + R+ DA+ LF +M
Sbjct: 120 KCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTG 178
Query: 170 -LRGGSGSRPNE----FTLSSLVKCCGLIPSY--GDGRQVHGCCWKHGFCDNVFVGSSLV 222
+R G + + +V +I Y DG + + NV +S+V
Sbjct: 179 LIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
Y R G + EA +F E+ +N VSW A+I LF +M+++ V
Sbjct: 239 YGYCRYGDVREAYRLFCEMPE-RNIVSWTAMISGFAWNELYREALM--LFLEMKKDVDAV 295
Query: 283 TE----FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV---GYVGNTLLHMYAKSGSI 335
+ A C V G+ LH ++ +G + V G + +L+HMYA SG I
Sbjct: 296 SPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLI 355
Query: 336 SDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM--LRDGIEPNDITFLSLLT 393
+ A+ + + D+ SCN ++ Y ++G + A LF+++ L D +++ S++
Sbjct: 356 ASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD-----KVSWTSMID 408
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEP 450
AG + R F L ++ + V+ I L+ + L A S + M+ ++P
Sbjct: 409 GYLEAG---DVSRAFGLFQKLHDKDGVTWTVMISGLV-QNELFAEAASLLSDMVRCGLKP 464
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVL---LANIYASAGRWKEAAN 507
+ + LL ++ ++ G + + + Y +L L ++YA G ++A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 508 IRKMM 512
I M
Sbjct: 525 IFAKM 529
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 12/260 (4%)
Query: 91 LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMI 150
L+ G L + L + D V S++ Y GD+ A +F ++ +KD VTWT MI
Sbjct: 379 LKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMI 438
Query: 151 TGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG 210
+G QNE +A L DM+R G +P T S L+ G + G+ +H K
Sbjct: 439 SGLVQNELFAEAASLLSDMVR--CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 211 FC--DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXX 268
C ++ + +SLV MYA+CG + +A +F ++ + K+ VSWN++I
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ-KDTVSWNSMI--MGLSHHGLADKA 553
Query: 269 XXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG---YVGNTL 325
LF +M G T+ +L + S G + +G L M ++ G Y+ ++
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYI--SM 611
Query: 326 LHMYAKSGSISDARKVFDRL 345
+ + ++G + +A + L
Sbjct: 612 IDLLGRAGKLKEAEEFISAL 631
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R ++P + Y LL + L +G+ +H DL++QNS++ MYA+CG
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+E A ++F +M KDTV+W SMI G + + A AL LF +ML SG +PN T ++
Sbjct: 519 IEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEML--DSGKKPNSVTFLGVL 576
Query: 188 KCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
C G ++ + + + S++D+ R G L EA+ L +
Sbjct: 577 SACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPD 636
Query: 247 EVSWNALI 254
+ AL+
Sbjct: 637 HTVYGALL 644
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 274/518 (52%), Gaps = 11/518 (2%)
Query: 35 DNVPELDKSYY--IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D +PE D + + +I ++ L + ++ EP+ + C++L L
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
G+ +H + + ++ D + ++++ MY +C LE AR+VF +MP K V W SMI G
Sbjct: 226 RGKEIHRKCVKKGFEL--DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC 212
Y + + + M+ G+RP++ TL+S++ C + G+ +HG +
Sbjct: 284 YVAKGDSKSCVEILNRMII--EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
+++V SL+D+Y +CG A+ VF + + E SWN +I ++
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE-SWNVMISSYISVGNWFKAVE--VY 398
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKS 332
+M G T++++L + S + +LE+GK +H + +S + + + LL MY+K
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 333 GSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
G+ +A ++F+ + K DVVS M+ Y HG +EA+ F +M + G++P+ +T L++L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 393 TACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML-IEP 450
+AC HAGL+DEG ++F MR ++G+EP + HY+ ++D+LGRAG L A I+
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 451 TAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRK 510
A + L A +H + +G A+ + E P + +++L N+YAS W A +R
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 511 MMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKI 548
MK+ GL+K+P CSW+E+ + V F + D +H + + +
Sbjct: 639 KMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENV 676
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 207/413 (50%), Gaps = 10/413 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + ++K LG+ GR++H+ L+ D+V+ +S++ MYA+ E++
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHT--LVVKSGYVCDVVVASSLVGMYAKFNLFENSL 162
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
QVFDEMP +D +W ++I+ + Q+ A AL LF M SG PN +L+ + C
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRM--ESSGFEPNSVSLTVAISACSR 220
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ G+++H C K GF + +V S+LVDMY +C L A+ VF ++ R K+ V+WN+
Sbjct: 221 LLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR-KSLVAWNS 279
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I + +M EG ++ T +++L + S +L GK++HG++++
Sbjct: 280 MI--KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR 337
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
S YV +L+ +Y K G + A VF + K S N M+ Y G +AV +
Sbjct: 338 SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEV 397
Query: 373 FKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGR 432
+ QM+ G++P+ +TF S+L ACS L++G++ + + +E + ++D+ +
Sbjct: 398 YDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV--FELDP 483
G A + + + W ++ A H + Y ++ F L P
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 202/454 (44%), Gaps = 51/454 (11%)
Query: 81 LLKTCTKLGK-LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP 139
LL+ CT K LR +LVH L +R D+V+ S++ +Y C D AR VF+
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRIL--TLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 140 -NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
D W S+++GY++N D L +F +L S P+ FT +++K G +
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLL-NCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
GR +H K G+ +V V SSLV MYA+ + VFDE+ ++ SWN +I
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE-RDVASWNTVI--SC 182
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
LF +M+ G+ + + + + S + LE+GK +H +K G +L
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
YV + L+ MY K + AR+VF ++ + +V+ NSM+ GY G K V + +M+
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDR 438
+G P+ T S+L ACS + L G+ + + V + ++DL + G
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG---- 358
Query: 439 AMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYAS 498
E L E + + SW +V++++ Y S
Sbjct: 359 -----EANLAETVFSKTQKDVAESW-------------------------NVMISS-YIS 387
Query: 499 AGRWKEAANIRKMMKDSGLKKE--------PACS 524
G W +A + M G+K + PACS
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACS 421
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 4/278 (1%)
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG 242
LS L +C S + VH G +V + SL+++Y C A+ VF+
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLE 301
+ WN+L+ +F ++ V + FT+ ++ + ++G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLE--VFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYA 361
G+ +H ++KSG V ++L+ MYAK ++ +VFD + + DV S N+++ +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 362 QHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVS 421
Q G ++A+ LF +M G EPN ++ ++ACS L+ G+ + + G E
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ +VD+ G+ L+ A + M + A W +++
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVA-WNSMI 281
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 260/502 (51%), Gaps = 42/502 (8%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K G + I G VE D + L+ K G LR + ++L+ DD + +
Sbjct: 204 KCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR-----MASYMLEQIREPDDHSL-S 257
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ YA CG + +R +FD N+ + W SMI+GY N ++ALVLF +M + +
Sbjct: 258 ALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR---NET 314
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
R + TL++++ C + G+Q+H K G D++ V S+L+DMY++CG EA
Sbjct: 315 REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 237 VFDELGRW------------------------------KNEVSWNALIXXXXXXXXXXXX 266
+F E+ + K+ +SWN++
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM--TNGFSQNGCTV 432
Query: 267 XXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLL 326
F +M + E + S+++ + +S+ SLE G+ + G V ++L+
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLI 492
Query: 327 HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
+Y K G + R+VFD +VK D V NSM+ GYA +G G EA+ LFK+M GI P I
Sbjct: 493 DLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQI 552
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEG 445
TF+ +LTAC++ GL++EG + F+ M+ G P H++ +VDLL RAG ++ A++ +E
Sbjct: 553 TFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEE 612
Query: 446 MLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEA 505
M + ++W ++L + MG AA+K+ EL+P S A+V L+ I+A++G W+ +
Sbjct: 613 MPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESS 672
Query: 506 ANIRKMMKDSGLKKEPACSWVE 527
A +RK+M+++ + K P SW +
Sbjct: 673 ALVRKLMRENNVTKNPGSSWTD 694
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 215/534 (40%), Gaps = 139/534 (26%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
N V+ +A+ G+L AR++F+ MP KD VT S++ GY N A +AL LF ++
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-----N 182
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF-CD--------NVFVG-------- 218
+ TL++++K C + + G+Q+H G CD NV+
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 219 --------------SSLVDMYARCGFLGEAQAVFDELGRWKNE--VSWNALIXXXXXXXX 262
S+L+ YA CG + E++ +FD R N + WN++I
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFD---RKSNRCVILWNSMISGYIANNM 299
Query: 263 XXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVG 322
LF +M+ E + T +A++ + +G LE GK +H H K G V
Sbjct: 300 KMEALV--LFNEMRNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 323 NTLLHMYAKSGS-------------------------------ISDARKVFDRLVKVDVV 351
+TLL MY+K GS I DA++VF+R+ ++
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
S NSM G++Q+G E + F QM + + ++++ S+++AC+ L+ GE+ F
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMG 471
G++ + ++DL + G ++ + M ++ W +++
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISG---------- 525
Query: 472 AYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE--------PAC 523
YA+ G+ EA ++ K M +G++ AC
Sbjct: 526 ------------------------YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC 561
Query: 524 SWVE-IENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVD 576
++ +E +F S + H G+VPD H VD
Sbjct: 562 NYCGLVEEGRKLFESMKVDH--------------------GFVPDKEHFSCMVD 595
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 166/366 (45%), Gaps = 19/366 (5%)
Query: 70 AVEPD-RALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
A+E D R Y RLL++C+ + R + LL+ + +++ N +L MY+R G +
Sbjct: 20 AMEVDCRRYYVRLLQSCSSRNRETLWRQTNG-LLLKKGFLSSIVIVANHLLQMYSRSGKM 78
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
AR +FDEMP+++ +W +MI GY + +L F DM+ G N +S K
Sbjct: 79 GIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPERDGYSWN-VVVSGFAK 136
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
L R++ + +V +SL+ Y G+ EA +F EL + +
Sbjct: 137 AGEL----SVARRLFNAMPEK----DVVTLNSLLHGYILNGYAEEALRLFKELNFSADAI 188
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
+ ++ + A++ G S+L+ + G L +
Sbjct: 189 TLTTVL--KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR----MAS 242
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
+ML+ R+ + + L+ YA G ++++R +FDR V+ NSM+ GY + E
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
A+VLF +M R+ + T +++ AC G L+ G++ +FG+ + + ++D
Sbjct: 303 ALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 429 LLGRAG 434
+ + G
Sbjct: 362 MYSKCG 367
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 47/261 (18%)
Query: 200 RQVHGCCWKHGFCDN-VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
RQ +G K GF + V V + L+ MY+R G +G A+ +FDE+ +N SWN +I
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD-RNYFSWNTMI---- 100
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
EGY + S E+G L + R
Sbjct: 101 -------------------EGY----------------MNSGEKGTSLRFFDMMPERD-- 123
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
GY N ++ +AK+G +S AR++F+ + + DVV+ NS+L GY +G+ +EA+ LFK++
Sbjct: 124 GYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL-- 181
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDR 438
+ IT ++L AC+ L G++ + GVE + +V++ + G L R
Sbjct: 182 -NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL-R 239
Query: 439 AMSFIEGMLIEPTAAIWGALL 459
S++ + EP AL+
Sbjct: 240 MASYMLEQIREPDDHSLSALI 260
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/435 (33%), Positives = 243/435 (55%), Gaps = 15/435 (3%)
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
DL AR + + TW + GY+ ++ V+++ ++ +M R G +PN+ T L
Sbjct: 62 DLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR--RGIKPNKLTFPFL 119
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+K C GRQ+ KHGF +V+VG++L+ +Y C +A+ VFDE+ +N
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE-RN 178
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
VSWN+++ F +M + + E T LL + G+L GK +
Sbjct: 179 VVSWNSIMTALVENGKLNLVFE--CFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLV 234
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H ++ +L +G L+ MYAKSG + AR VF+R+V +V + ++M++G AQ+GF
Sbjct: 235 HSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFA 294
Query: 367 KEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF-GVEPKVSHYA 424
+EA+ LF +M+++ + PN +TFL +L ACSH GL+D+G +YF M + ++P + HY
Sbjct: 295 EEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYG 354
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE---MGAYAAQKVFEL 481
+VD+LGRAG L+ A FI+ M EP A +W LL A +H + +G +++ EL
Sbjct: 355 AMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIEL 414
Query: 482 DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIA 541
+P SG V++AN +A A W EAA +R++MK++ +KK S +E+ S H F S
Sbjct: 415 EPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFS---G 471
Query: 542 HPQKDKIIKMWEKLN 556
+ + + + ++E L+
Sbjct: 472 YDPRSEYVSIYELLD 486
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 46/365 (12%)
Query: 66 IDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
+ R ++P++ + LLK C L GR + L D D+ + N+++ +Y C
Sbjct: 104 MKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF--DVYVGNNLIHLYGTC 161
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
AR+VFDEM ++ V+W S++T +N + F +M+ G P+E T+
Sbjct: 162 KKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI--GKRFCPDETTMVV 219
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
L+ CG + G+ VH N +G++LVDMYA+ G L A+ VF+ + K
Sbjct: 220 LLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD-K 276
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF-TYSALLCSASSVGSLEQG- 303
N +W+A+I LF+KM +E + T+ +LC+ S G ++ G
Sbjct: 277 NVWTWSAMI--VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K+ H + K+ +K ++ +M+ +
Sbjct: 335 KYFH-----------------------------EMEKIHK--IKPMMIHYGAMVDILGRA 363
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS-HAGLLDEGERYFQLMRQFGVEPKVSH 422
G EA K+M EP+ + + +LL+ACS H DEG R +EPK S
Sbjct: 364 GRLNEAYDFIKKM---PFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSG 420
Query: 423 YAKIV 427
IV
Sbjct: 421 NLVIV 425
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 223/408 (54%), Gaps = 17/408 (4%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVD---ALVLFPDMLRGGSG-SRPNEFTL 183
L +A + ++PN + ++I+ N + A L+ +L S RPNEFT
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 184 SSLVKCCGLIPSYG-DGRQVHGCCWKHGFCDNV----FVGSSLVDMYARCGFLGEAQAVF 238
SL K G + GR +H K F + V FV ++LV YA CG L EA+++F
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 239 DELGRWKNEVSWNALIXXXXXXXXXXX-XXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
+ + R + +WN L+ LF +MQ E + AL+ S +++
Sbjct: 174 ERI-REPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP---NELSLVALIKSCANL 229
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSML 357
G +G W H ++LK+ L +VG +L+ +Y+K G +S ARKVFD + + DV N+M+
Sbjct: 230 GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMI 289
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGV 416
G A HGFG+E + L+K ++ G+ P+ TF+ ++ACSH+GL+DEG + F M+ +G+
Sbjct: 290 RGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGI 349
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
EPKV HY +VDLLGR+G L+ A I+ M ++P A +W + LG+S H E G A +
Sbjct: 350 EPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
+ L+ SG +VLL+NIYA RW + R++MKD + K P S
Sbjct: 410 HLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 18/319 (5%)
Query: 71 VEPDRALYQRLLKTCTKLGKL-REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V P+ Y L K + R GR +H+H L V D +Q +++ YA CG L
Sbjct: 108 VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLR 167
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERA---VDALVLFPDMLRGGSGSRPNEFTLSSL 186
AR +F+ + D TW +++ YA +E + L+LF M RPNE +L +L
Sbjct: 168 EARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM-----QVRPNELSLVAL 222
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+K C + + G H K+ N FVG+SL+D+Y++CG L A+ VFDE+ + ++
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQ-RD 281
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
+NA+I L+ + +G T+ + + S G +++G +
Sbjct: 282 VSCYNAMI--RGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Query: 307 HGHM--LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQH 363
M + V + G L+ + +SG + +A + ++ VK + S L H
Sbjct: 340 FNSMKAVYGIEPKVEHYG-CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTH 398
Query: 364 GFGKEAVVLFKQMLRDGIE 382
G + + K +L G+E
Sbjct: 399 GDFERGEIALKHLL--GLE 415
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
VL L R V P+ L+K+C LG+ G H + L N + + S++ +
Sbjct: 203 VLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQ--FVGTSLIDL 260
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y++CG L AR+VFDEM +D + +MI G A + + + L+ ++ G P+
Sbjct: 261 YSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI--SQGLVPDSA 318
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
T + C +G Q+ +G V LVD+ R G L EA+ +
Sbjct: 319 TFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKK 378
Query: 241 LGRWKNEVSWNALI 254
+ N W + +
Sbjct: 379 MPVKPNATLWRSFL 392
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 250/472 (52%), Gaps = 42/472 (8%)
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ +A +VFDE+P D ++ T++I + + R V+A F +L G RPNEFT +++
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL--CLGIRPNEFTFGTVI 100
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE------- 240
G+Q+H K G NVFVGS++++ Y + L +A+ FD+
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 241 --------------------LGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQR 277
L R E V+WNA+I F M R
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT--FVDMLR 218
Query: 278 EGYGV-TEFTYSALLCSASSVGSLEQGKWLHGHMLKS-GRKLVGYVGNTLLHMYAKSGSI 335
EG + E T+ + + S++ S GK +H +K G++ +V N+L+ Y+K G++
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 336 SDARKVFDRLV--KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDITFLSLL 392
D+ F++L + ++VS NSM+ GYA +G G+EAV +F++M++D + PN++T L +L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEP---KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
AC+HAGL+ EG YF +P ++ HYA +VD+L R+G A I+ M ++
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIR 509
P W ALLG +H + AA K+ ELDP ++V+L+N Y++ W+ + IR
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 510 KMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
+ MK++GLK+ CSW+E+ + + VFV+ D + KD++ +M ++Q ++E
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 107 DVRDDLVIQ-NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
D RD V+ +++ Y + + E A +F MP + VTW ++I G++Q R +A+
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH-GFCDNVFVGSSLVDM 224
F DMLR G PNE T + I S+G G+ +H C K G NVFV +SL+
Sbjct: 213 FVDMLREGV-VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 225 YARCGFLGEAQAVFDEL-GRWKNEVSWNALI 254
Y++CG + ++ F++L +N VSWN++I
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMI 302
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 274/536 (51%), Gaps = 66/536 (12%)
Query: 89 GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G LR G+ + + Q V++ +V +S++ Y + G + AR +FD M ++ +TWT+
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVKE-VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTA 244
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK 208
MI GY + D LF M + G + N TL+ + K C Y +G Q+HG +
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGD-VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
Query: 209 HGFCDNVFVGSSLVDMYARCGF-------------------------------LGEAQAV 237
++F+G+SL+ MY++ G+ + EA +
Sbjct: 304 MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYEL 363
Query: 238 FDELG-----RW-------------------------KNEVSWNALIXXXXXXXXXXXXX 267
F+++ W K+ ++W A+I
Sbjct: 364 FEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEAL 423
Query: 268 XXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLH 327
F KM ++ +T+S++L + +S+ L +G +HG ++K V N+L+
Sbjct: 424 C--WFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 328 MYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDIT 387
MY K G+ +DA K+F + + ++VS N+M+ GY+ +GFGK+A+ LF + G EPN +T
Sbjct: 482 MYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVT 541
Query: 388 FLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
FL+LL+AC H G +D G +YF+ M+ + +EP HYA +VDLLGR+GLLD A + I M
Sbjct: 542 FLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
Query: 447 LIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAA 506
+P + +WG+LL AS H ++++ AA+K+ EL+P + +V+L+ +Y+ G+ ++
Sbjct: 602 PCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCD 661
Query: 507 NIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEI 562
I + K +KK+P SW+ ++ VH F++ D + ++I + + +E++ I
Sbjct: 662 RIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEMELI 717
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 124/565 (21%), Positives = 231/565 (40%), Gaps = 78/565 (13%)
Query: 5 MYPITTRVKLVQRHSVTLRRLWQTAISDDNDNVPELDKSYYIIDDRNLLRRSKTGLHVLD 64
M PI+ + L+ RH++ LR A+S+ P K+ RN L + T +
Sbjct: 3 MRPISNK-GLIYRHNICLRCNSTLAVSNHE---PITQKT------RNFLETTTTSTAIFQ 52
Query: 65 LIDR-------GAVEPDRALYQRL-----LKTCTKLGKLRE-GRLVHSHFLLQNPDVRDD 111
+ G ++ A+++++ + + E G++ + + VR
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
+ M DL A ++F ++P K+ V++ +MITG+ + R +A L+ +
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
S + LS ++ + R G K V SS+V Y + G +
Sbjct: 173 KFRDSVASNVLLSGYLRAGKWNEAV---RVFQGMAVKE-----VVSCSSMVHGYCKMGRI 224
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG-YGVTEFTYSAL 290
+A+++FD + +N ++W A+I LF +M++EG V T + +
Sbjct: 225 VDARSLFDRMTE-RNVITWTAMI--DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
+ +G +HG + + + ++GN+L+ MY+K G + +A+ VF + D
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQML-RDGI--------------------------EP 383
VS NS++ G Q EA LF++M +D + E
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
++IT+ ++++A G +E +F M Q V P ++ + L A L D I
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV--LSATASLAD----LI 455
Query: 444 EGMLIEPTAAIWGALLGASWMHKKIEM-----GAYAAQKVFEL--DPFYSGAHVLLANIY 496
EG+ I + S + + M A K+F +P + +++ Y
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG-Y 514
Query: 497 ASAGRWKEAANIRKMMKDSGLKKEP 521
+ G K+A + M++ SG KEP
Sbjct: 515 SYNGFGKKALKLFSMLESSG--KEP 537
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V P+ + +L L L EG +H + N + +DL +QNS++ MY +CG+
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN--IVNDLSVQNSLVSMYCKCGNTND 491
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A ++F + + V++ +MI+GY+ N AL LF ML SG PN T +L+ C
Sbjct: 492 AYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF-SMLE-SSGKEPNGVTFLALLSAC 549
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVG----SSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ Y D + K + N+ G + +VD+ R G L +A + + +
Sbjct: 550 VHV-GYVDLGWKYFKSMKSSY--NIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPH 606
Query: 247 EVSWNALI 254
W +L+
Sbjct: 607 SGVWGSLL 614
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 246/482 (51%), Gaps = 11/482 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+ PD L+++ + L+ +H+ + DV+ + + N+ + Y +CGDL+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ--VTVANTWISTYGKCGDLDS 206
Query: 131 ARQVFDEMPNKD--TVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A+ VF+ + D V+W SM Y+ A DA L+ MLR +P+ T +L
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR--EEFKPDLSTFINLAA 264
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
C + GR +H G ++ ++ + MY++ A+ +FD + + V
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS-RTCV 323
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SW +I LF M + G T +L+ GSLE GKW+
Sbjct: 324 SWTVMISGYAEKGDMDEALA--LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 309 HMLKSGRKLVG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G K + N L+ MY+K GSI +AR +FD + VV+ +M+ GYA +G
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 441
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKI 426
EA+ LF +M+ +PN ITFL++L AC+H+G L++G YF +M+Q + + P + HY+ +
Sbjct: 442 EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLLGR G L+ A+ I M +P A IWGALL A +H+ +++ AA+ +F L+P +
Sbjct: 502 VDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMA 561
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKD 546
+V +ANIYA+AG W A IR +MK +KK P S +++ H F + H + +
Sbjct: 562 APYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENE 621
Query: 547 KI 548
I
Sbjct: 622 VI 623
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 199/437 (45%), Gaps = 12/437 (2%)
Query: 66 IDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
+ RG EP+ + + K C +L + +VH+H L+++P D+ + + + M+ +C
Sbjct: 43 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAH-LIKSP-FWSDVFVGTATVDMFVKC 100
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
+++A +VF+ MP +D TW +M++G+ Q+ A LF +M + P+ T+ +
Sbjct: 101 NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL--NEITPDSVTVMT 158
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW- 244
L++ S +H + G V V ++ + Y +CG L A+ VF+ + R
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+ VSWN++ L+ M RE + T+ L S + +L QG+
Sbjct: 219 RTVVSWNSMF--KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H H + G NT + MY+KS AR +FD + VS M+ GYA+ G
Sbjct: 277 LIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE-PKVSHY 423
EA+ LF M++ G +P+ +T LSL++ C G L+ G+ +G + V
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
++D+ + G + A + E T W ++ ++ K+ +LD
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNT-PEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD- 454
Query: 484 FYSGAHV-LLANIYASA 499
Y H+ LA + A A
Sbjct: 455 -YKPNHITFLAVLQACA 470
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 48/382 (12%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
GL+ L L R +PD + + L +C L +GRL+HSH + D D+ N+
Sbjct: 242 GLYCLML--REEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD--QDIEAINTF 297
Query: 119 LFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRP 178
+ MY++ D AR +FD M ++ V+WT MI+GYA+ +AL LF M++ SG +P
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIK--SGEKP 355
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFC--DNVFVGSSLVDMYARCGFLGEAQA 236
+ TL SL+ CG S G+ + +G C DNV + ++L+DMY++CG + EA+
Sbjct: 356 DLVTLLSLISGCGKFGSLETGKWIDARADIYG-CKRDNVMICNALIDMYSKCGSIHEARD 414
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
+FD K V+W +I LF+KM Y T+ A+L + +
Sbjct: 415 IFDNTPE-KTVVTWTTMI--AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH 471
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
GSLE+G W + H++K +V++ +D SC
Sbjct: 472 SGSLEKG-WEYFHIMK---------------------------QVYNISPGLDHYSCMVD 503
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
L+G + G +EA+ L + M +P+ + +LL AC + E+ + + F +
Sbjct: 504 LLG--RKGKLEEALELIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQAAESL--FNL 556
Query: 417 EPKVSH-YAKIVDLLGRAGLLD 437
EP+++ Y ++ ++ AG+ D
Sbjct: 557 EPQMAAPYVEMANIYAAAGMWD 578
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 122/261 (46%), Gaps = 7/261 (2%)
Query: 146 WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
W I V++L+LF +M RG G PN FT + K C + G VH
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRG--GFEPNNFTFPFVAKACARLADVGCCEMVHAH 77
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
K F +VFVG++ VDM+ +C + A VF+ + ++ +WNA++
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPE-RDATTWNAML--SGFCQSGHT 134
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
LF +M+ T L+ SAS SL+ + +H ++ G + V NT
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 326 LHMYAKSGSISDARKVFDRLVKVD--VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
+ Y K G + A+ VF+ + + D VVS NSM Y+ G +A L+ MLR+ +P
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 384 NDITFLSLLTACSHAGLLDEG 404
+ TF++L +C + L +G
Sbjct: 255 DLSTFINLAASCQNPETLTQG 275
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
LF +M+R G+ FT+ + + + + + + +H H++KS +VG + M+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLS 390
K S+ A KVF+R+ + D + N+ML G+ Q G +A LF++M + I P+ +T ++
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 391 LLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM-LIE 449
L+ + S L E + + GV+ +V+ + G+ G LD A E + +
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 450 PTAAIWGALLGA 461
T W ++ A
Sbjct: 219 RTVVSWNSMFKA 230
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 239/459 (52%), Gaps = 20/459 (4%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++P+ +L+ C + R G+ +H + + D+ +L +V+ MYA+CG
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI--KADIESELETATAVISMYAKCGRFSP 454
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A + F+ +P KD V + ++ GY Q A A ++ +M G P+ T+ +++ C
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC--PDSRTMVGMLQTC 512
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
Y G V+G KHGF V +L++M+ +C L A +FD+ G K+ VSW
Sbjct: 513 AFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSW 572
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N I F +M+ E + T+ ++ +A+ + +L G +H +
Sbjct: 573 N--IMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
++ G VGN+L+ MYAK G I + K F + +VS N+ML YA HG AV
Sbjct: 631 IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAV 690
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDL 429
LF M + ++P+ ++FLS+L+AC HAGL++EG+R F+ M + +E +V HYA +VDL
Sbjct: 691 SLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDL 750
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH 489
LG+AGL A+ + M ++ + +WGALL +S MH + + A ++ +L+P + +H
Sbjct: 751 LGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPL-NPSH 809
Query: 490 VLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEI 528
Y+ R E N+ + +KK PACSW+E+
Sbjct: 810 ------YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 190/390 (48%), Gaps = 15/390 (3%)
Query: 67 DRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCG 126
+ ++PD+ + LK C ++G +H L+ + D+ I +++ MY +
Sbjct: 92 EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD--LIAEMGLESDVYIGTALVEMYCKAR 149
Query: 127 DLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
DL ARQVFD+M KD VTW +M++G AQN + AL+LF DM + +L +L
Sbjct: 150 DLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM--RSCCVDIDHVSLYNL 207
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSS-LVDMYARCGFLGEAQAVFDELGRWK 245
+ + R +HG K GF +F SS L+DMY C L A++VF+E+ R K
Sbjct: 208 IPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWR-K 263
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+E SW ++ LF M+ + + ++ L +A+ VG L +G
Sbjct: 264 DESSWGTMM--AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA 321
Query: 306 LHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
+H + ++ G L+G V +L+ MY+K G + A ++F + DVVS ++M+ Y Q
Sbjct: 322 IHDYAVQQG--LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
G EA+ LF+ M+R I+PN +T S+L C+ G+ + +E ++
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAA 453
++ + + G A+ E + I+ A
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 209/485 (43%), Gaps = 26/485 (5%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDV---RDDLVIQNSV 118
V L G L+ + C + + L+ + L+ DV LVI+
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 119 LF--------MYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+F MY C DL A VF+E+ KD +W +M+ YA N + L LF D++
Sbjct: 233 IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF-DLM 291
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
R R N+ +S ++ + G +H + G +V V +SL+ MY++CG
Sbjct: 292 RN-YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGE 350
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
L A+ +F + ++ VSW+A+I LF M R T +++
Sbjct: 351 LEIAEQLFINIED-RDVVSWSAMIASYEQAGQHDEAIS--LFRDMMRIHIKPNAVTLTSV 407
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
L + V + GK +H + +K+ + ++ MYAK G S A K F+RL D
Sbjct: 408 LQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDA 467
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE-RYFQ 409
V+ N++ GY Q G +A ++K M G+ P+ T + +L C+ G Y Q
Sbjct: 468 VAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 410 LMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
+++ F E V+H ++++ + L A+ + E + W ++ +H +
Sbjct: 528 IIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQA 585
Query: 469 EMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMK-DSGLKKEPACSWVE 527
E A A + +++ F A V NI +A E + +R M S L + CS
Sbjct: 586 E-EAVATFRQMKVEKFQPNA-VTFVNIVRAAA---ELSALRVGMSVHSSLIQCGFCSQTP 640
Query: 528 IENSV 532
+ NS+
Sbjct: 641 VGNSL 645
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 6/309 (1%)
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
+R +FD + + V W SMI GY + +AL F M G P++++ + +K C
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEE-KGIDPDKYSFTFALKAC 110
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G ++H + G +V++G++LV+MY + L A+ VFD++ K+ V+W
Sbjct: 111 AGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM-HVKDVVTW 169
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N ++ LF M+ + + L+ + S + + + LHG +
Sbjct: 170 NTMV--SGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLV 227
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+K G + + L+ MY + A VF+ + + D S +M+ YA +GF +E +
Sbjct: 228 IKKG--FIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVL 285
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
LF M + N + S L A ++ G L +G Q G+ VS ++ +
Sbjct: 286 ELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMY 345
Query: 431 GRAGLLDRA 439
+ G L+ A
Sbjct: 346 SKCGELEIA 354
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+HG ++ SG K N L++ Y+ +R +FD + VV NSM+ GY + G
Sbjct: 24 VHGSLIVSGLK----PHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 366 GKEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
+EA+ F M + GI+P+ +F L AC+ + +G R L+ + G+E V
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+V++ +A L A + M ++ W ++
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVT-WNTMV 173
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/506 (30%), Positives = 253/506 (50%), Gaps = 50/506 (9%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R +V P Y L+K + + E H V+ IQ +++ Y+ G
Sbjct: 864 RDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVK----IQTTLIDFYSATGR 919
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ AR+VFDEMP +D + WT+M++ Y R +D + S N+ +
Sbjct: 920 IREARKVFDEMPERDDIAWTTMVSAY---RRVLDM---------DSANSLANQMSEK--- 964
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
N + L++ Y G L +A+++F+++ K+
Sbjct: 965 --------------------------NEATSNCLINGYMGLGNLEQAESLFNQMP-VKDI 997
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
+SW +I +F KM EG E T S ++ + + +G LE GK +H
Sbjct: 998 ISWTTMIKGYSQNKRYREAIA--VFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
+ L++G L Y+G+ L+ MY+K GS+ A VF L K ++ NS++ G A HGF +
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER-YFQLMRQFGVEPKVSHYAKI 426
EA+ +F +M + ++PN +TF+S+ TAC+HAGL+DEG R Y ++ + + V HY +
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGM 1175
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
V L +AGL+ A+ I M EP A IWGALL +HK + + A K+ L+P S
Sbjct: 1176 VHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS 1235
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE-PACSWVEIENSVHVFVSNDIAHPQK 545
G + LL ++YA RW++ A IR M++ G++K P S + I+ H+F + D +H
Sbjct: 1236 GYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSAS 1295
Query: 546 DKIIKMWEKLNQEIKEIGYVPDTRHV 571
D++ + +++ ++ GYV +T +V
Sbjct: 1296 DEVCLLLDEIYDQMGLAGYVQETENV 1321
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 183/431 (42%), Gaps = 72/431 (16%)
Query: 79 QRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
++++K C+ KL E L N D R + N + L+ A +M
Sbjct: 777 KKIIKQCST-PKLLESALAAMIKTSLNQDCR----LMNQFITACTSFKRLDLAVSTMTQM 831
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
+ + ++ G+ + +L L+ MLR P+ +T SSLVK +G+
Sbjct: 832 QEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS--PSSYTYSSLVKASSFASRFGE 889
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
Q H WK GF +V + ++L+D Y+ G + EA+ VFDE+ +++++W ++
Sbjct: 890 SLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE-RDDIAWTTMVS--- 943
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
Y +L ++ L M +
Sbjct: 944 ---------------------------AYRRVL-------DMDSANSLANQMSEKNEA-- 967
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
N L++ Y G++ A +F+++ D++S +M+ GY+Q+ +EA+ +F +M+
Sbjct: 968 --TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDR 438
+GI P+++T ++++AC+H G+L+ G+ Q G V + +VD+ + G L+R
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 439 AM---------------SFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
A+ S IEG+ A G A M K+EM + V +
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGL------AAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 484 FYSGAHVLLAN 494
F + H L +
Sbjct: 1140 FTACTHAGLVD 1150
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 5/202 (2%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
+R + + V + + PD ++ C LG L G+ VH + LQN V D +
Sbjct: 1011 KRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH-MYTLQNGFVLD-VY 1068
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
I ++++ MY++CG LE A VF +P K+ W S+I G A + A +AL +F M
Sbjct: 1069 IGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM-- 1126
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVH-GCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
+PN T S+ C +GR+++ + NV +V ++++ G +
Sbjct: 1127 ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIY 1186
Query: 233 EAQAVFDELGRWKNEVSWNALI 254
EA + + N V W AL+
Sbjct: 1187 EALELIGNMEFEPNAVIWGALL 1208
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 246/473 (52%), Gaps = 63/473 (13%)
Query: 66 IDRGAVEPDRALYQRLLKTCTKL-----GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLF 120
+++ V PDR + +LK C+KL G G++V F+L ++N+++
Sbjct: 103 MEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNE-------YVKNALIL 155
Query: 121 MYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNE 180
+A CGDL A ++FD+ V W+SM +GYA+ + +A+ LF +M
Sbjct: 156 FHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM----------- 204
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
Y D QV W NV + L +C + A+ +FD
Sbjct: 205 --------------PYKD--QV---AW------NVMITGCL-----KCKEMDSARELFDR 234
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
K+ V+WNA+I +F +M+ G T +LL + + +G L
Sbjct: 235 FTE-KDVVTWNAMI--SGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 301 EQGKWLHGHMLKSGRKLVG-YVG----NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNS 355
E GK LH ++L++ YVG N L+ MYAK GSI A +VF + D+ + N+
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNT 351
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-F 414
+++G A H + ++ +F++M R + PN++TF+ ++ ACSH+G +DEG +YF LMR +
Sbjct: 352 LIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMY 410
Query: 415 GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYA 474
+EP + HY +VD+LGRAG L+ A F+E M IEP A +W LLGA ++ +E+G YA
Sbjct: 411 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYA 470
Query: 475 AQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+K+ + SG +VLL+NIYAS G+W +RKM D+ +KK S +E
Sbjct: 471 NEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV--- 113
K L + + PD LL C LG L G+ +H ++L+ V +
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI-YILETASVSSSIYVGT 315
Query: 114 -IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
I N+++ MYA+CG ++ A +VF + ++D TW ++I G A + A ++ +F +M R
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQR- 373
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFL 231
PNE T ++ C +GR+ + N+ +VDM R G L
Sbjct: 374 -LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 232 GEAQAVFDELGRWKNEVSWNALI 254
EA + + N + W L+
Sbjct: 433 EEAFMFVESMKIEPNAIVWRTLL 455
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 137/360 (38%), Gaps = 25/360 (6%)
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV--DMYA 226
M+R + R L + C I + +Q+H +G N+ V L+ +
Sbjct: 1 MIRRQTNDRTTNRRRPKLWQNCKNIRTL---KQIHASMVVNGLMSNLSVVGELIYSASLS 57
Query: 227 RCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
G L A +FDE+ + + + L L+ +M++ G +T
Sbjct: 58 VPGALKYAHKLFDEIPKPDVSICNHVL---RGSAQSMKPEKTVSLYTEMEKRGVSPDRYT 114
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
++ +L + S + G HG +++ G L YV N L+ +A G + A ++FD
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
K V+ +SM GYA+ G EA+ LF +M + + + ++T C +D
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARE 230
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASW 463
F E V + ++ G A+ + M P +LL A
Sbjct: 231 LFDRF----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 286
Query: 464 MHKKIEMGAYAAQKVFELDPFYSGAHV------LLANIYASAGRWKEAANIRKMMKDSGL 517
+ +E G + E S +V L ++YA G A + + +KD L
Sbjct: 287 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/507 (30%), Positives = 264/507 (52%), Gaps = 51/507 (10%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V D+ +LK C++LG ++ G +H L+ + DL +QN ++ +Y +CG L
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHG--FLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+RQ+FD MP +D+V++ SMI GY + V A LF M P E + +L+
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM--------PME--MKNLISW 223
Query: 190 CGLIPSYG---DGRQVHG-----------CCW--------KHGFCDN------------V 215
+I Y DG + W KHG ++ V
Sbjct: 224 NSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV 283
Query: 216 FVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
++++D YA+ GF+ A+ +FD++ ++ V++N+++ +F+ M
Sbjct: 284 VTWATMIDGYAKLGFVHHAKTLFDQMPH-RDVVAYNSMMAGYVQNKYHMEALE--IFSDM 340
Query: 276 QREGYGVTEFTYSALLCSA-SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
++E + + + T ++ A + +G L + +H ++++ L G +G L+ MY+K GS
Sbjct: 341 EKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGS 400
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
I A VF+ + + N+M+ G A HG G+ A + Q+ R ++P+DITF+ +L A
Sbjct: 401 IQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNA 460
Query: 395 CSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAA 453
CSH+GL+ EG F+LMR + +EP++ HY +VD+L R+G ++ A + IE M +EP
Sbjct: 461 CSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDV 520
Query: 454 IWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMK 513
IW L A HK+ E G A+ + + ++VLL+N+YAS G WK+ +R MMK
Sbjct: 521 IWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK 580
Query: 514 DSGLKKEPACSWVEIENSVHVFVSNDI 540
+ ++K P CSW+E++ VH F + I
Sbjct: 581 ERKIEKIPGCSWIELDGRVHEFFVDSI 607
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/524 (30%), Positives = 271/524 (51%), Gaps = 49/524 (9%)
Query: 74 DRALYQRLLKTCTKL--GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
DR ++ + T T + G LR +L + L Q R+ +V N+++ YA+ G ++ A
Sbjct: 101 DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN-VVSWNTMIDGYAQSGRIDKA 159
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
++FDEMP ++ V+W SM+ Q R +A+ LF M R + + +++V
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM------PRRDVVSWTAMVDGLA 213
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD-----ELGRW-- 244
+ R++ C + N+ ++++ YA+ + EA +F + W
Sbjct: 214 KNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNT 269
Query: 245 -----------------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
KN +SW +I +F+KM R+G
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN--VFSKMLRDGSV 327
Query: 282 VTEF-TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
TY ++L + S + L +G+ +H + KS + V + LL+MY+KSG + ARK
Sbjct: 328 KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARK 387
Query: 341 VFDR--LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
+FD + + D++S NSM+ YA HG GKEA+ ++ QM + G +P+ +T+L+LL ACSHA
Sbjct: 388 MFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHA 447
Query: 399 GLLDEGERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGA 457
GL+++G +F+ L+R + + HY +VDL GRAG L +FI + + +GA
Sbjct: 448 GLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGA 507
Query: 458 LLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGL 517
+L A +H ++ + +KV E +G +VL++NIYA+ G+ +EAA +R MK+ GL
Sbjct: 508 ILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Query: 518 KKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
KK+P CSWV++ H+FV D +HPQ + + + L ++++
Sbjct: 568 KKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 59/399 (14%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
G E D + ++ KLG +RE R L D R ++V +++ Y R L
Sbjct: 71 GLPERDVVTWTHVITGYIKLGDMREARE-----LFDRVDSRKNVVTWTAMVSGYLRSKQL 125
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A +F EMP ++ V+W +MI GYAQ+ R AL LF +M N + +S+VK
Sbjct: 126 SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVK 179
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ + + +V +++VD A+ G + EA+ +FD + +N +
Sbjct: 180 ALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE-RNII 234
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
SWNA+I GY +++ L
Sbjct: 235 SWNAMIT-----------------------GYAQN--------------NRIDEADQLFQ 257
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
M + R + NT++ + ++ ++ A +FDR+ + +V+S +M+ GY ++ +E
Sbjct: 258 VMPE--RDFASW--NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 369 AVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
A+ +F +MLRDG ++PN T++S+L+ACS L EG++ QL+ + + + ++
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 428 DLLGRAGLLDRAMS-FIEGMLIEPTAAIWGALLGASWMH 465
++ ++G L A F G++ + W +++ H
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 77/141 (54%), Gaps = 7/141 (4%)
Query: 54 RRSKTGLHVLDLIDR-GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDL 112
+ ++ L+V + R G+V+P+ Y +L C+ L L EG+ +H L+ + +
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ--LISKSVHQKNE 366
Query: 113 VIQNSVLFMYARCGDLEHARQVFDE--MPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
++ +++L MY++ G+L AR++FD + +D ++W SMI YA + +A+ ++ M
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 171 RGGSGSRPNEFTLSSLVKCCG 191
+ G +P+ T +L+ C
Sbjct: 427 K--HGFKPSAVTYLNLLFACS 445
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 147/468 (31%), Positives = 241/468 (51%), Gaps = 51/468 (10%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFP 167
V ++V+ S++ Y DL AR+ FD P +D V W +MI+GY + ++A LF
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 168 DMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR 227
M P C +V +++++ YA
Sbjct: 115 QM------------------------P-----------------CRDVMSWNTVLEGYAN 133
Query: 228 CGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV-TEFT 286
G + + VFD++ +N SWN LI F +M EG V + T
Sbjct: 134 IGDMEACERVFDDMPE-RNVFSWNGLIKGYAQNGRVSEVLGS--FKRMVDEGSVVPNDAT 190
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY-VGNTLLHMYAKSGSISDARKVFDRL 345
+ +L + + +G+ + GKW+H + G V V N L+ MY K G+I A +VF +
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE 405
+ D++S N+M+ G A HG G EA+ LF +M GI P+ +TF+ +L AC H GL+++G
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Query: 406 RYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
YF M F + P++ H +VDLL RAG L +A+ FI M ++ A IW LLGAS +
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKV 370
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
+KK+++G A +++ +L+P V+L+NIY AGR+ +AA ++ M+D+G KKE S
Sbjct: 371 YKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVS 430
Query: 525 WVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVL 572
W+E ++ + F S+ HP+ +++ +++ +E+K + D H +
Sbjct: 431 WIETDDGLVKFYSSGEKHPRTEEL----QRILRELKSFNILRDEEHFM 474
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 18/353 (5%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
E D L+ ++ ++G + E R + + D++ N+VL YA GD+E
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR------DVMSWNTVLEGYANIGDMEAC 140
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
+VFD+MP ++ +W +I GYAQN R + L F M+ GS PN+ T++ ++ C
Sbjct: 141 ERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS-VVPNDATMTLVLSACA 199
Query: 192 LIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ ++ G+ VH G+ +V V ++L+DMY +CG + A VF + R ++ +SW
Sbjct: 200 KLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKR-RDLISW 258
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N +I LF +M+ G + T+ +LC+ +G +E G M
Sbjct: 259 NTMI--NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSM 316
Query: 311 LK--SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGK 367
S + + G ++ + +++G ++ A + +++ VK D V ++L +
Sbjct: 317 FTDFSIMPEIEHCG-CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVD 375
Query: 368 EAVVLFKQMLRDGIEP-NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPK 419
V +++++ +EP N F+ L AG D+ R MR G + +
Sbjct: 376 IGEVALEELIK--LEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKE 426
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 4/191 (2%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++D G+V P+ A +L C KLG G+ VH + + + D+ ++N+++ MY +
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN-KVDVNVKNALIDMYGK 236
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
CG +E A +VF + +D ++W +MI G A + +AL LF +M SG P++ T
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEM--KNSGISPDKVTFV 294
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
++ C + DG + + +VD+ +R GFL +A +++
Sbjct: 295 GVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
Query: 244 WKNEVSWNALI 254
+ V W L+
Sbjct: 355 KADAVIWATLL 365
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 255/489 (52%), Gaps = 49/489 (10%)
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
AL + + K GK ++ + F + DL I +L ++ +CG L +ARQVF
Sbjct: 40 ALQEHINSPAPKAGKKIHADIIKTGF-------QPDLNISIKLLILHLKCGCLSYARQVF 92
Query: 136 DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG---- 191
DE+P + MI+GY ++ + L+L M SG + + +TLS ++K
Sbjct: 93 DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM--SYSGEKADGYTLSMVLKASNSRGS 150
Query: 192 -LIPSYGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDEL-------- 241
+I R VH K D+V + ++LVD Y + G L A+ VF+ +
Sbjct: 151 TMILPRSLCRLVHARIIKCDVELDDVLI-TALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 242 ----------------------GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
+ K+ V +NA++ ++ MQR G
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD-MYISMQRAG 268
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR 339
+ T+++++ + S + S E G+ +H ++KSG +G++LL MYAK G I+DAR
Sbjct: 269 FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDAR 328
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
+VFD++ + +V S SM+ GY ++G +EA+ LF +M IEPN +TFL L+ACSH+G
Sbjct: 329 RVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 400 LLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
L+D+G F+ M R + ++PK+ HYA IVDL+GRAG L++A F M P + IW AL
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAAL 448
Query: 459 LGASWMHKKIEMGAYAAQKVFELDP-FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGL 517
L + +H +E+ + AA ++F+L+ GA++ L+N+YAS +W + IR++MK +
Sbjct: 449 LSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
Query: 518 KKEPACSWV 526
K SW
Sbjct: 509 SKTIGRSWT 517
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 102/185 (55%), Gaps = 10/185 (5%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
VE D L L+ T K GKL R V +N +V S++ Y G +E
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDEN------VVCCTSMISGYMNQGFVED 224
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQN-ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
A ++F+ KD V + +M+ G++++ E A ++ ++ M R +G PN T +S++
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR--AGFHPNISTFASVIGA 282
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C ++ S+ G+QVH K G ++ +GSSL+DMYA+CG + +A+ VFD++ + KN S
Sbjct: 283 CSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM-QEKNVFS 341
Query: 250 WNALI 254
W ++I
Sbjct: 342 WTSMI 346
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/560 (27%), Positives = 271/560 (48%), Gaps = 78/560 (13%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+L+ C LG+ R H+ + ++++L + N +L +Y + G + A +F EMP
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVI--QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPV 221
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC----------- 189
++ ++W MI G++Q A+ +F M R +P+E T +S++ C
Sbjct: 222 RNRMSWNVMIKGFSQEYDCESAVKIFEWMQR--EEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 190 ------------------------CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
C + + +VHG K GF + + ++L+ +Y
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX---------------- 269
+ G + +A+ +F ++ R K SWN+LI
Sbjct: 340 GKQGKVKDAEHLFRQI-RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 270 ---------------------XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
F +MQ T +L + + +L G+ +HG
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHG 458
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKE 368
H++++ V N L++MYAK G +S+ VF+ + D++S NS++ GY HGF ++
Sbjct: 459 HVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEK 518
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERYFQLMRQFGVEPKVSHYAKIV 427
A+ +F +M+ G P+ I +++L+ACSHAGL+++G E ++ + ++FG+EP+ HYA IV
Sbjct: 519 ALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIV 578
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG 487
DLLGR G L A ++ M +EP + GALL + MHK +++ A ++ L+P +G
Sbjct: 579 DLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTG 638
Query: 488 AHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDK 547
+++LL+NIY++ GRW+E+AN+R + K LKK SW+E++ + F S I + +
Sbjct: 639 SYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFET 698
Query: 548 IIKMWEKLNQEIKEIGYVPD 567
I + E L + + G D
Sbjct: 699 IYPVLEDLVSHMLKKGPTHD 718
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 53/378 (14%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
+ LL C + R+ VH+ LL + R + N ++ +YAR G L AR VF+
Sbjct: 59 FDHLLGLCLTAQQCRQ---VHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFET 114
Query: 138 MP---NKDTVTWTSMITGYAQNERAVDALVLFPDM-LRGGSGSRPNEFTLSSLVKCCGLI 193
+ D W S++ + +AL L+ M RG +G + + L +++ C +
Sbjct: 115 VSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTG---DGYILPLILRACRYL 171
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
+G R H + G +N+ V + L+ +Y + G +G+A +F E+ +N +SWN +
Sbjct: 172 GRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPV-RNRMSWNVM 230
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ----------- 302
I +F MQRE + E T++++L S G E
Sbjct: 231 I--KGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMS 288
Query: 303 ------------------------GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
+ +HG+++K G + N L+H+Y K G + DA
Sbjct: 289 GNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 339 RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD----GIEPNDITFLSLLTA 394
+F ++ + S NS++ + G EA+ LF ++ ++ N +T+ S++
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 395 CSHAGLLDEGERYFQLMR 412
C+ G D+ YF+ M+
Sbjct: 409 CNVQGRGDDSLEYFRQMQ 426
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 11/231 (4%)
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVF----VGSSLVDMYARCGFLGEAQAVFD--ELGRW 244
GL + RQVH + D +F + ++L+ +YAR G L +A+ VF+ L
Sbjct: 64 GLCLTAQQCRQVHA---QVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLL 120
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+ WN+++ L+ M++ G + +L + +G +
Sbjct: 121 SDLRLWNSILKANVSHGLYENALE--LYRGMRQRGLTGDGYILPLILRACRYLGRFGLCR 178
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
H +++ G K +V N LL +Y K+G + DA +F + + +S N M+ G++Q
Sbjct: 179 AFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEY 238
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
+ AV +F+ M R+ +P+++T+ S+L+ S G ++ +YF LMR G
Sbjct: 239 DCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSG 289
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/470 (31%), Positives = 246/470 (52%), Gaps = 37/470 (7%)
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
Q ++ ++ TV+WTS I +N R +A F DM +G PN T +L+ CG
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTL--AGVEPNHITFIALLSGCGD 83
Query: 193 IPSYGD--GRQVHGCCWKHGFCDN-VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
S + G +HG K G N V VG++++ MY++ G +A+ VFD + KN V+
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMED-KNSVT 142
Query: 250 WNALIXXXXXXXXXXXXXXX-----------------------------XLFAKMQREGY 280
WN +I F +MQ G
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
A L + +++G+L G W+H ++L K V N+L+ +Y + G + AR+
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
VF + K VVS NS+++G+A +G E++V F++M G +P+ +TF LTACSH GL
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 401 LDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
++EG RYFQ+M+ + + P++ HY +VDL RAG L+ A+ ++ M ++P + G+LL
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 460 GASWMH-KKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
A H I + + + +L+ +V+L+N+YA+ G+W+ A+ +R+ MK GLK
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLK 442
Query: 519 KEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDT 568
K+P S +EI++ +HVF++ D AH + I ++ E ++ +++ G V +T
Sbjct: 443 KQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 153/296 (51%), Gaps = 18/296 (6%)
Query: 86 TKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVT 145
+K G+ ++ RLV + +N V N+++ Y R G +++A ++FD+MP +D ++
Sbjct: 120 SKRGRFKKARLVFDYMEDKNS------VTWNTMIDGYMRSGQVDNAAKMFDKMPERDLIS 173
Query: 146 WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
WT+MI G+ + +AL+ F +M SG +P+ + + + C + + G VH
Sbjct: 174 WTAMINGFVKKGYQEEALLWFREMQI--SGVKPDYVAIIAALNACTNLGALSFGLWVHRY 231
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXX 265
F +NV V +SL+D+Y RCG + A+ VF + + + VSWN++I
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK-RTVVSWNSVI--VGFAANGNA 288
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN-- 323
F KMQ +G+ T++ L + S VG +E+G + ++K ++ + +
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG-LRYFQIMKCDYRISPRIEHYG 347
Query: 324 TLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
L+ +Y+++G + DA K+ + +K + V S+L + HG +VL +++++
Sbjct: 348 CLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG---NNIVLAERLMK 400
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
V+PD L CT LG L G VH + L Q D ++++ + NS++ +Y RCG +E
Sbjct: 201 GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ--DFKNNVRVSNSLIDLYCRCGCVE 258
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
ARQVF M + V+W S+I G+A N A ++LV F M G +P+ T + +
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE--KGFKPDAVTFTGALTA 316
Query: 190 C---GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
C GL+ Q+ C ++ + LVD+Y+R G L +A + + N
Sbjct: 317 CSHVGLVEEGLRYFQIMKCDYR--ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 247 EVSWNALI 254
EV +L+
Sbjct: 375 EVVIGSLL 382
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 142/474 (29%), Positives = 246/474 (51%), Gaps = 12/474 (2%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R+ G L I V D + L++ CT ++ G + H L+ +
Sbjct: 122 RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAG--IQLHCLMVKQGLESSCFP 179
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
S++ Y +CG + AR+VF+ + ++D V W ++++ Y N +A L M +
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN 239
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
R + FT SSL+ C + G+Q+H +K + ++ V ++L++MYA+ L +A
Sbjct: 240 RFRGDYFTFSSLLSACRI----EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDA 295
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
+ F+ + +N VSWNA+I LF +M E E T++++L S
Sbjct: 296 RECFESM-VVRNVVSWNAMIVGFAQNGEGREAMR--LFGQMLLENLQPDELTFASVLSSC 352
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCN 354
+ ++ + K + + K G V N+L+ Y+++G++S+A F + + D+VS
Sbjct: 353 AKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWT 412
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF 414
S++ A HGF +E++ +F+ ML+ ++P+ ITFL +L+ACSH GL+ EG R F+ M +F
Sbjct: 413 SVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEF 471
Query: 415 -GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAY 473
+E + HY ++DLLGRAG +D A + M EP+ A G +H+K E +
Sbjct: 472 YKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKW 531
Query: 474 AAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK-KEPACSWV 526
A+K+ E++P + +L+N Y S G W +AA +RK + + K P CSW+
Sbjct: 532 GAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 186/376 (49%), Gaps = 23/376 (6%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQ---- 155
H + + + L +QN +L Y + + + A ++FDEMP ++ VTW +I G Q
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 156 -NERA-----VDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH 209
N RA + +LF D+ + + L++ C + G Q+H K
Sbjct: 119 TNHRAHLGFCYLSRILFTDV-------SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 210 GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX 269
G + F +SLV Y +CG + EA+ VF+ + ++ V WNAL+
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLD-RDLVLWNALVSSYVLNGMIDEAFGL 230
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
+ + FT+S+LL S +EQGK +H + K + V LL+MY
Sbjct: 231 LKLMGSDKNRFRGDYFTFSSLL----SACRIEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
AKS +SDAR+ F+ +V +VVS N+M++G+AQ+G G+EA+ LF QML + ++P+++TF
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
S+L++C+ + E ++ ++ + G +S ++ R G L A+ + E
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-E 405
Query: 450 PTAAIWGALLGASWMH 465
P W +++GA H
Sbjct: 406 PDLVSWTSVIGALASH 421
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 15/270 (5%)
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
D +Q HG K G +++F+ + L+ Y + +A +FDE+ +N V+WN LI
Sbjct: 53 SDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMP-LRNIVTWNILIHG 111
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL-----LCSASSVGSLEQGKWLHGHML 311
F + R + + + LC+ S+ +++ G LH M+
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST--NMKAGIQLHCLMV 169
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
K G + + +L+H Y K G I +AR+VF+ ++ D+V N+++ Y +G EA
Sbjct: 170 KQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFG 229
Query: 372 LFKQMLRDG--IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
L K M D + TF SLL+AC +++G++ ++ + + + ++++
Sbjct: 230 LLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
++ L A E M++ + W A++
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVS-WNAMI 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
++S+ L K HG M+K G ++ N LL Y K DA K+FD + ++V+
Sbjct: 46 SASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTW 105
Query: 354 NSMLIGYAQH----------GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
N ++ G Q GF + +LF + D ++F+ L+ C+ + +
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLD-----HVSFMGLIRLCTDSTNMKA 160
Query: 404 GERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASW 463
G + LM + G+E +V G+ GL+ A E +L + +W AL+ +
Sbjct: 161 GIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL-DRDLVLWNALVSSYV 219
Query: 464 MHKKIE 469
++ I+
Sbjct: 220 LNGMID 225
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 217/395 (54%), Gaps = 4/395 (1%)
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
SG + T + L++ C Y G+++H + GF N ++ L+ +YA G L
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
A +F L + ++ + WNA+I ++ M++ ++T++++ +
Sbjct: 162 AGILFRSL-KIRDLIPWNAMISGYVQKGLEQEGLF--IYYDMRQNRIVPDQYTFASVFRA 218
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
S++ LE GK H M+K K V + L+ MY K S SD +VFD+L +V++
Sbjct: 219 CSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITW 278
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERYFQLMR 412
S++ GY HG E + F++M +G PN +TFL +LTAC+H GL+D+G E ++ + R
Sbjct: 279 TSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR 338
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
+G+EP+ HYA +VD LGRAG L A F+ + +WG+LLGA +H +++
Sbjct: 339 DYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLE 398
Query: 473 YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
AA K ELDP G +V+ AN YAS G + A+ +R+ M+++G+KK+P S +E++ V
Sbjct: 399 LAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEV 458
Query: 533 HVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPD 567
H F+ +D +H +KI K ++ +I Y PD
Sbjct: 459 HRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 10/242 (4%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
VEP+ Y LL+ C + + +G+ +H+ + + + L ++ +L +YA GDL+
Sbjct: 106 VEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVK--LLILYALSGDLQT 161
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A +F + +D + W +MI+GY Q + L ++ DM + + P+++T +S+ + C
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ--NRIVPDQYTFASVFRAC 219
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ G++ H K N+ V S+LVDMY +C + VFD+L +N ++W
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITW 278
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
+LI F KM+ EG T+ +L + + G +++G W H +
Sbjct: 279 TSLI--SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYS 335
Query: 311 LK 312
+K
Sbjct: 336 MK 337
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ GL + + + + PD+ + + + C+ L +L G+ H+ ++ ++ ++++ +
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA--VMIKRCIKSNIIVDS 248
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
+++ MY +C +VFD++ ++ +TWTS+I+GY + + + L F M G
Sbjct: 249 ALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKE--EGC 306
Query: 177 RPNEFTLSSLVKCC---GLIPSYGDGRQVHGCCWKHGFCDNVFVG--------SSLVDMY 225
RPN T ++ C GL+ W+H + G +++VD
Sbjct: 307 RPNPVTFLVVLTACNHGGLVDK----------GWEHFYSMKRDYGIEPEGQHYAAMVDTL 356
Query: 226 ARCGFLGEA 234
R G L EA
Sbjct: 357 GRAGRLQEA 365
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 220/418 (52%), Gaps = 6/418 (1%)
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
SVL R GD+E R++F +P W +M++GY+ E +A+ F M
Sbjct: 355 SVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF--QNL 412
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
+P++ TLS ++ C + G+Q+HG + N + S L+ +Y+ C + ++
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV-TEFTYSALLCSAS 295
+FD+ + WN++I LF +M + E +++ +L S S
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALI--LFRRMHQTAVLCPNETSFATVLSSCS 530
Query: 296 SVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNS 355
+ SL G+ HG ++KSG +V L MY K G I AR+ FD +++ + V N
Sbjct: 531 RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERYFQLMRQF 414
M+ GY +G G EAV L+++M+ G +P+ ITF+S+LTACSH+GL++ G E + R
Sbjct: 591 MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIH 650
Query: 415 GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYA 474
G+EP++ HY IVD LGRAG L+ A E + ++ +W LL + +H + +
Sbjct: 651 GIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRV 710
Query: 475 AQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
A+K+ LDP S A+VLL+N Y+S +W ++A ++ +M + + K P SW N +
Sbjct: 711 AEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDL 768
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 181/376 (48%), Gaps = 25/376 (6%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
+G + I R ++ D L RLL + G R V ++ D+ N+
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVR------DVYSWNA 77
Query: 118 VLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
L + GDL A +VFD MP +D V+W +MI+ + ALV++ M+ G
Sbjct: 78 FLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV--CDGFL 135
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE-AQA 236
P+ FTL+S++ C + G + HG K G N+FVG++L+ MYA+CGF+ +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC---- 292
VF+ L + NEVS+ A+I +F M +G V S +L
Sbjct: 196 VFESLSQ-PNEVSYTAVIGGLARENKVLEAVQ--MFRLMCEKGVQVDSVCLSNILSISAP 252
Query: 293 -----SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
S S + E GK +H L+ G ++ N+LL +YAK+ ++ A +F + +
Sbjct: 253 REGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPE 312
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
V+VVS N M++G+ Q ++V +M G +PN++T +S+L AC +G ++ G R
Sbjct: 313 VNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI 372
Query: 408 FQLMRQFGVEPKVSHY 423
F + Q P VS +
Sbjct: 373 FSSIPQ----PSVSAW 384
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 7/234 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++PD+ +L +C +L L G+ +H ++ ++ + I + ++ +Y+ C +E
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHG--VVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 131 ARQVFDEMPNK-DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+ +FD+ N+ D W SMI+G+ N AL+LF M + PNE + ++++
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC-PNETSFATVLSS 528
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C + S GRQ HG K G+ + FV ++L DMY +CG + A+ FD + R KN V
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLR-KNTVI 587
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
WN +I L+ KM G T+ ++L + S G +E G
Sbjct: 588 WNEMI--HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P+ + +L +C++L L GR H L+ D ++ ++ MY +CG+++ AR
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHG--LVVKSGYVSDSFVETALTDMYCKCGEIDSAR 574
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC-- 190
Q FD + K+TV W MI GY N R +A+ L+ M+ SG +P+ T S++ C
Sbjct: 575 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMI--SSGEKPDGITFVSVLTACSH 632
Query: 191 -GLIPS----YGDGRQVHGC--CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
GL+ + +++HG H C +VD R G L +A+ + +
Sbjct: 633 SGLVETGLEILSSMQRIHGIEPELDHYIC--------IVDCLGRAGRLEDAEKLAEATPY 684
Query: 244 WKNEVSWNALI 254
+ V W L+
Sbjct: 685 KSSSVLWEILL 695
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 241/486 (49%), Gaps = 38/486 (7%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN-KDTVTWTSMITGYAQNERAVDALVLFPDM 169
D V +N+++ Y R GD++ A VF P DT++W ++I GYAQN +AL + M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
+G + +E + +++ + S G++VH K+G N FV S +VD+Y +CG
Sbjct: 252 EE--NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCG 309
Query: 230 FLG-------------------------------EAQAVFDELGRWKNEVSWNALIXXXX 258
+ EA+ +FD L KN V W A+
Sbjct: 310 NMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE-KNLVVWTAMFLGYL 368
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
A + E ++L + S +E GK +HGH L++G +
Sbjct: 369 NLRQPDSVLELAR-AFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMD 427
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
+ + MY+K G++ A ++FD + D V N+M+ G A HG ++ F+ M
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLD 437
G +P++ITF++LL+AC H GL+ EGE+YF+ ++ + + P+ HY ++DL G+A LD
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 438 RAMSFIEGM-LIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIY 496
+A+ +EG+ +E A I GA L A +K E+ +K+ ++ ++ +AN Y
Sbjct: 548 KAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAY 607
Query: 497 ASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLN 556
AS+GRW E IR M+ L+ CSW I+ H+F S+DI+H + + I M +
Sbjct: 608 ASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVT 667
Query: 557 QEIKEI 562
+++ EI
Sbjct: 668 KDLSEI 673
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 170/394 (43%), Gaps = 52/394 (13%)
Query: 79 QRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD-E 137
+L+ +K G LRE R V L +N + N+V+ Y + +++ AR++F+ +
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERN------VYSWNAVIAAYVKFNNVKEARELFESD 80
Query: 138 MPNKDTVTWTSMITGYAQNERA-VDALVLFPDMLRGGSGSR-PNEFTLSSLVKCCGLIPS 195
+D +T+ ++++G+A+ + +A+ +F +M R ++FT++++VK + +
Sbjct: 81 NCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTN 140
Query: 196 YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF--------DELGR---- 243
G Q+HG K G F SSL+ MY++CG E +F D + R
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMI 200
Query: 244 ----------------WKN-----EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
W+N +SWN LI + M+ G
Sbjct: 201 AAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV--SMEENGLKW 258
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
E ++ A+L SS+ SL+ GK +H +LK+G +V + ++ +Y K G++ A
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
++ S +SM++GY+ G EA LF + + FL L L
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLN-------LR 371
Query: 403 EGERYFQLMRQF-GVEPKVSHYAKIVDLLGRAGL 435
+ + +L R F E +V +LG L
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSL 405
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + +L C+ + G+ +H H L + LV + + MY++CG++E+A
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV--TAFVDMYSKCGNVEYAE 448
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
++FD +DTV + +MI G A + + F DM G G +P+E T +L+ C
Sbjct: 449 RIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG--GFKPDEITFMALLSAC 504
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
L+ G H +KSG L N L+++Y+KSG + +AR VFD +++ +V S N+++
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
Y + KEA LF+ D E + IT+ +LL+
Sbjct: 64 YVKFNNVKEARELFES---DNCERDLITYNTLLSG 95
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/416 (31%), Positives = 233/416 (56%), Gaps = 5/416 (1%)
Query: 110 DDLVIQNSVLFMYARCGDL-EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
++V+ + ++ Y++ L + VF MP ++ +W +I ++++ A ++ LF
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M R S RP++FTL +++ C G +H C K GF ++FV S+LV MY
Sbjct: 124 MWRE-SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
G L A+ +FD++ ++ V + A+ +F +M G+ +
Sbjct: 183 GKLLHARKLFDDMPV-RDSVLYTAMFGGYVQQGEAMLGLA--MFREMGYSGFALDSVVMV 239
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+LL + +G+L+ GK +HG ++ L +GN + MY K + A VF + +
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRR 299
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
DV+S +S+++GY G + LF +ML++GIEPN +TFL +L+AC+H GL+++ YF
Sbjct: 300 DVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF 359
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
+LM+++ + P++ HYA + D + RAGLL+ A F+E M ++P A+ GA+L ++ +
Sbjct: 360 RLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 469 EMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
E+G A+++ +L P + +V LA +Y++AGR+ EA ++R+ MK+ + K P CS
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 44/377 (11%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V PD +L+ C+ + + G L+ H L L + ++++ MY G L H
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLI--HVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR++FD+MP +D+V +T+M GY Q A+ L +F +M G SG + + SL+ C
Sbjct: 188 ARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM--GYSGFALDSVVMVSLLMAC 245
Query: 191 GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
G + + G+ VHG C + C + +G+++ DMY +C L A VF + R ++ +SW
Sbjct: 246 GQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR-RDVISW 304
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
++LI LF +M +EG T+ +L SA + G L + WL+ +
Sbjct: 305 SSLI--LGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL-SACAHGGLVEKSWLYFRL 361
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
++ Y L YA V C S + G +EA
Sbjct: 362 MQE------YNIVPELKHYA------------------SVADCMS------RAGLLEEAE 391
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP-KVSHYAKIVDL 429
+ M ++P++ ++L+ C G ++ GER + + Q ++P K S+Y + L
Sbjct: 392 KFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ--LKPRKASYYVTLAGL 446
Query: 430 LGRAGLLDRAMSFIEGM 446
AG D A S + M
Sbjct: 447 YSAAGRFDEAESLRQWM 463
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/569 (27%), Positives = 272/569 (47%), Gaps = 77/569 (13%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
+++ + + + + VEP R L +G + EG+ H+ ++ ++ D ++
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL--DNIL 311
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
S+L Y + G +E+A VFD M KD VTW +I+GY Q DA+ + M
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL--E 369
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDM---------- 224
+ + TL++L+ + G++V C +H F ++ + S+++DM
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 225 ---------------------YARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXX 260
YA G GEA +F + G N ++WN +I
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 261 XXXXXXXXXXL---------------------------------FAKMQREGYGVTEFTY 287
L KMQ G F+
Sbjct: 490 GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGR--KLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
+ L + + + SL G+ +HG+++++ + LV + +L+ MYAK G I+ A KVF
Sbjct: 550 TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS-IETSLVDMYAKCGDINKAEKVFGSK 608
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG- 404
+ ++ N+M+ YA +G KEA+ L++ + G++P++IT ++L+AC+HAG +++
Sbjct: 609 LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWM 464
E + ++ + ++P + HY +VDLL AG ++A+ IE M +P A + +L+ +
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
+K E+ Y ++K+ E +P SG +V ++N YA G W E +R+MMK GLKK+P CS
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Query: 525 WVEI--ENSVHVFVSNDIAHPQKDKIIKM 551
W++I E VHVFV+ND H + ++I M
Sbjct: 789 WIQITGEEGVHVFVANDKTHTRINEIQMM 817
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 194/374 (51%), Gaps = 7/374 (1%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
PD + + K C L R GR VH + + + D + + +S+ MY +CG L+ A
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVV--KSGLEDCVFVASSLADMYGKCGVLDDAS 228
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+VFDE+P+++ V W +++ GY QN + +A+ LF DM + G P T+S+ +
Sbjct: 229 KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK--QGVEPTRVTVSTCLSASAN 286
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ +G+Q H +G + +G+SL++ Y + G + A+ VFD + K+ V+WN
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE-KDVVTWNL 345
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I ++++ Y T + L+ +A+ +L+ GK + + ++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCV--TLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
+ + +T++ MYAK GSI DA+KVFD V+ D++ N++L YA+ G EA+ L
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 373 FKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGR 432
F M +G+ PN IT+ ++ + G +DE + F M+ G+ P + + +++ + +
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 433 AGLLDRAMSFIEGM 446
G + A+ F+ M
Sbjct: 524 NGCSEEAILFLRKM 537
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 6/385 (1%)
Query: 77 LYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD 136
+Y +L+ C L G+ +H+ L + I+ ++ YA+C LE A +F
Sbjct: 72 IYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFS 131
Query: 137 EMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSY 196
++ ++ +W ++I + AL+ F +ML + P+ F + ++ K CG +
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE--NEIFPDNFVVPNVCKACGALKWS 189
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
GR VHG K G D VFV SSL DMY +CG L +A VFDE+ +N V+WNAL+
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD-RNAVAWNALM-- 246
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
LF+ M+++G T T S L +++++G +E+GK H + +G +
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
L +G +LL+ Y K G I A VFDR+ + DVV+ N ++ GY Q G ++A+ + + M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLL 436
+ ++ + +T +L++A + L G+ + E + + ++D+ + G +
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 437 DRAMSFIEGMLIEPTAAIWGALLGA 461
A + +E +W LL A
Sbjct: 427 VDAKKVFDST-VEKDLILWNTLLAA 450
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 206/368 (55%), Gaps = 32/368 (8%)
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD 349
L S +++ SLE K +H H L+S + + N ++ M+ + SI+DA++VFD +V D
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
+ S + M+ Y+ +G G +A+ LF++M + G++PN+ TFL++ AC+ G ++E +F
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 410 LMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKI 468
M+ + G+ PK HY ++ +LG+ G L A +I + EPTA W A+ + +H I
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 469 EMGAYAAQKVFELDPFYSGAHVLLANIYASAGR-WKEAANIRKMMKDSGLKKEPACSWVE 527
++ Y + + ++DP + ++ I + +KE + + +E
Sbjct: 422 DLEDYMEELMVDVDP----SKAVINKIPTPPPKSFKETNMVTSKSR-----------ILE 466
Query: 528 IENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYH 587
N KD+ +M K K + YVPDTR VL +DQ KE L YH
Sbjct: 467 FRNLTFY----------KDEAKEMAAK-----KGVVYVPDTRFVLHDIDQEAKEQALLYH 511
Query: 588 SEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDG 647
SE+LA+A+ ++ T P T+ I+KN+RVCGDCH+ +K ++ I+ R +IVRD RFHHF DG
Sbjct: 512 SERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDG 571
Query: 648 FCSCGDYW 655
CSCGDYW
Sbjct: 572 KCSCGDYW 579
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
++L+D+GA+ PDR + L ++C L L + VH HFL R D + N V+ M
Sbjct: 224 AIELLDKGAM-PDRECFVLLFESCANLKSLEHSKKVHDHFLQSK--FRGDPKLNNMVISM 280
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
+ C + A++VFD M +KD +W M+ Y+ N DAL LF +M + G +PNE
Sbjct: 281 FGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTK--HGLKPNEE 338
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWK--HGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
T ++ C + + +H K HG ++ + +CG L EA+
Sbjct: 339 TFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 240 ELGRWKNEVSWNAL 253
+L W A+
Sbjct: 398 DLPFEPTADFWEAM 411
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 242/460 (52%), Gaps = 13/460 (2%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+ PD + L+ K+ + +G+ H F++++ D V NS+L MY + L
Sbjct: 326 GMHPDGVVISCLINELGKMMLVPQGKAFHG-FVIRHCFSLDSTVC-NSLLSMYCKFELLS 383
Query: 130 HARQVF---DEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
A ++F E NK+ W +M+ GY + + V + LF + G + + +S+
Sbjct: 384 VAEKLFCRISEEGNKEA--WNTMLKGYGKMKCHVKCIELFRKIQN--LGIEIDSASATSV 439
Query: 187 VKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKN 246
+ C I + G+ +H K + V +SL+D+Y + G L A +F E N
Sbjct: 440 ISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD--TN 497
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWL 306
++WNA+I LF +M E + + T LL + + GSLE+G+ +
Sbjct: 498 VITWNAMIASYVHCEQSEKAIA--LFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 307 HGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFG 366
H ++ ++ ++ + L+ MYAK G + +R++FD + D V N M+ GY HG
Sbjct: 556 HRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDV 615
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
+ A+ LF QM ++P TFL+LL+AC+HAGL+++G++ F M Q+ V+P + HY+ +
Sbjct: 616 ESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCL 675
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLL R+G L+ A S + M P IWG LL + H + EMG A++ DP
Sbjct: 676 VDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQND 735
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
G +++LAN+Y++AG+W+EA R+MM++SG+ K S V
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 196/398 (49%), Gaps = 8/398 (2%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
+P+ + + C+ LG L+EGR +H F ++N V Q+S+ Y++ G+ A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHG-FAVKNGLASSKFV-QSSMFSFYSKSGNPSEA 284
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
F E+ ++D +WTS+I A++ ++ +F +M G P+ +S L+ G
Sbjct: 285 YLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN--KGMHPDGVVISCLINELG 342
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+ G+ HG +H F + V +SL+ MY + L A+ +F + N+ +WN
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
++ LF K+Q G + + ++++ S S +G++ GK LH +++
Sbjct: 403 TML--KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
K+ L V N+L+ +Y K G ++ A ++F +V++ N+M+ Y ++A+
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIA 519
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLG 431
LF +M+ + +P+ IT ++LL AC + G L+ G+ + + + E +S A ++D+
Sbjct: 520 LFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYA 579
Query: 432 RAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
+ G L+++ + + A W ++ MH +E
Sbjct: 580 KCGHLEKSRELFDAG-NQKDAVCWNVMISGYGMHGDVE 616
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 11/325 (3%)
Query: 102 LLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVD 161
L+ + +++ + + ++ YA G + +VF + +D W S+I + N
Sbjct: 49 LIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYAR 108
Query: 162 ALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG-FCDNVFVGSS 220
+L F ML SG P+ FT +V C + + G VHG KHG F N VG+S
Sbjct: 109 SLCFFFSMLL--SGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
V Y++CGFL +A VFDE+ ++ V+W A+I KM G
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPD-RDVVAWTAIISGHVQNGESEGGLG--YLCKMHSAGS 223
Query: 281 GVTEFTYSALLC---SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
V + L C + S++G+L++G+ LHG +K+G +V +++ Y+KSG+ S+
Sbjct: 224 DVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSE 283
Query: 338 ARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
A F L D+ S S++ A+ G +E+ +F +M G+ P+ + L+
Sbjct: 284 AYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGK 343
Query: 398 AGLLDEGERY--FQLMRQFGVEPKV 420
L+ +G+ + F + F ++ V
Sbjct: 344 MMLVPQGKAFHGFVIRHCFSLDSTV 368
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 250/461 (54%), Gaps = 11/461 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLRE-GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
P L LL CT++G + R+ H+ +L + +++ +++ +++ MY + D A
Sbjct: 146 PKSELVASLLALCTRMGSSSKVARMFHA-LVLVDERMQESVLLSTALVDMYLKFDDHAAA 204
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
VFD+M K+ V+WT+MI+G N+ + LF M R RPN TL S++ C
Sbjct: 205 FHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR--ENLRPNRVTLLSVLPACV 262
Query: 192 LIPSYGDG--RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
+ +YG +++HG ++HG + + ++ + MY RCG + ++ +F E + ++ V
Sbjct: 263 EL-NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLF-ETSKVRDVVM 320
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
W+++I L +M++EG T A++ + ++ L +H
Sbjct: 321 WSSMISGYAETGDCSEVMN--LLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
+LK G +GN L+ MYAK GS+S AR+VF L + D+VS +SM+ Y HG G EA
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEA 438
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
+ +FK M++ G E +D+ FL++L+AC+HAGL++E + F ++ + + HYA ++L
Sbjct: 439 LEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINL 498
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEM-GAYAAQKVFELDPFYSGA 488
LGR G +D A M ++P+A IW +LL A H ++++ G A ++ + +P
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPAN 558
Query: 489 HVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
+VLL+ I+ +G + A +R++M+ L K S +E E
Sbjct: 559 YVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 168/359 (46%), Gaps = 11/359 (3%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
D V+ NS++ MYA+ R+VFDEM ++DTV++ S+I Q+ +A+ L +M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCW-KHGFCDNVFVGSSLVDMYARCG 229
G + +E S L C + S R H ++V + ++LVDMY +
Sbjct: 141 FYGFIPK-SELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
A VFD++ KNEVSW A+I LF MQRE T +
Sbjct: 200 DHAAAFHVFDQM-EVKNEVSWTAMI--SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 290 LL--CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK 347
+L C + GS K +HG + G + + MY + G++S +R +F+
Sbjct: 257 VLPACVELNYGS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKV 315
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
DVV +SM+ GYA+ G E + L QM ++GIE N +T L++++AC+++ LL
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV 375
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMS-FIEGMLIEPTAAIWGALLGASWMH 465
+ + G + ++D+ + G L A F E L E W +++ A +H
Sbjct: 376 HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE--LTEKDLVSWSSMINAYGLH 432
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 179 NEFT--LSSLVKCCGLIPS-YGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEA 234
N FT L S++K C + G Q+H C K G CD V V +SL+ MYA+
Sbjct: 43 NGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTV-VSNSLISMYAKFSRKYAV 101
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
+ VFDE+ ++ VS+ ++I L +M G+ ++LL
Sbjct: 102 RKVFDEMLH-RDTVSYCSII--NSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALC 158
Query: 295 SSVGSLEQ-GKWLHGHMLKSGRKLVGYVGNT-LLHMYAKSGSISDARKVFDRLVKVDVVS 352
+ +GS + + H +L R + +T L+ MY K + A VFD++ + VS
Sbjct: 159 TRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS 218
Query: 353 CNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTAC 395
+M+ G + + V LF+ M R+ + PN +T LS+L AC
Sbjct: 219 WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 10/205 (4%)
Query: 274 KMQREGYGVTEFTYSALLCSASSVGSLEQ-----GKWLHGHMLKSGRKLVGYVGNTLLHM 328
K++ G FT A+L S + +Q G LH LK+G V N+L+ M
Sbjct: 34 KLKIHSLGTNGFT--AILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISM 91
Query: 329 YAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
YAK RKVFD ++ D VS S++ Q G EA+ L K+M G P
Sbjct: 92 YAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELV 151
Query: 389 LSLLTACSHAGLLDEGERYFQ--LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
SLL C+ G + R F ++ ++ V +VD+ + A + M
Sbjct: 152 ASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQM 211
Query: 447 LIEPTAAIWGALLGASWMHKKIEMG 471
++ + W A++ ++ EMG
Sbjct: 212 EVKNEVS-WTAMISGCVANQNYEMG 235
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 247/467 (52%), Gaps = 17/467 (3%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
++ ++ G PD + ++K C+ G++R G VH L D D+V+ S +
Sbjct: 97 LMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFD--KDVVVGTSFVDF 154
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y +C DL AR+VF EMP ++ V+WT+++ Y ++ +A +F M GS
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSW--NA 212
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
+ LVK L+ + +++ K ++ +S++D YA+ G + A+ +F+E
Sbjct: 213 LVDGLVKSGDLV----NAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEE- 263
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
R + +W+ALI +F++M + EF L+ + S +G E
Sbjct: 264 ARGVDVRAWSALILGYAQNGQPNEAFK--VFSEMCAKNVKPDEFIMVGLMSACSQMGCFE 321
Query: 302 QGKWLHGHMLKSGRKLVG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
+ + ++ + K YV L+ M AK G + A K+F+ + + D+VS SM+ G
Sbjct: 322 LCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGM 381
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPK 419
A HG G EA+ LF++M+ +GI P+++ F +L C + L++EG RYF+LMR+ + +
Sbjct: 382 AIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILAS 441
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
HY+ IV+LL R G L A I+ M E A+ WG+LLG +H E+ A+ +F
Sbjct: 442 PDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLF 501
Query: 480 ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
EL+P +G++VLL+NIYA+ RW + A++R M ++G+ K SW+
Sbjct: 502 ELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 153/319 (47%), Gaps = 23/319 (7%)
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
VF+ +P+ T W +I GY+ + + + M+R G +RP+E+T ++K C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGL-ARPDEYTFPLVMKVCSNN 123
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
G VHG + GF +V VG+S VD Y +C L A+ VF E+ +N VSW AL
Sbjct: 124 GQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE-RNAVSWTAL 182
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
+ +F M G +++AL+ G L K L M K
Sbjct: 183 V--VAYVKSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPK- 235
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
R ++ Y +++ YAK G + AR +F+ VDV + +++++GYAQ+G EA +F
Sbjct: 236 -RDIISY--TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGER----YFQLMRQFGVEPKVSHYA--KIV 427
+M ++P++ + L++ACS G + E+ Q M +F SHY ++
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALI 347
Query: 428 DLLGRAGLLDRAMSFIEGM 446
D+ + G +DRA E M
Sbjct: 348 DMNAKCGHMDRAAKLFEEM 366
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 218/403 (54%), Gaps = 11/403 (2%)
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
GD+ +R + D+ P W +++ Y ++E +DA+ ++ M+R S P+ ++L
Sbjct: 68 GDIFRSR-ILDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVR--STVLPDRYSLPI 122
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
++K I + G+++H + GF + F S + +Y + G A+ VFDE K
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERK 182
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
SWNA+I +F M+R G +FT ++ S +G L
Sbjct: 183 LG-SWNAIIGGLNHAGRANEAVE--MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQ 239
Query: 306 LHGHML--KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
LH +L K+ K + N+L+ MY K G + A +F+ + + +VVS +SM++GYA +
Sbjct: 240 LHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAAN 299
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSH 422
G EA+ F+QM G+ PN ITF+ +L+AC H GL++EG+ YF +M+ +F +EP +SH
Sbjct: 300 GNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSH 359
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
Y IVDLL R G L A +E M ++P +WG L+G +EM + A + EL+
Sbjct: 360 YGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELE 419
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
P+ G +V+LAN+YA G WK+ +RK+MK + K PA S+
Sbjct: 420 PWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 173/351 (49%), Gaps = 16/351 (4%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R V PDR ++K ++ G+ +HS + D ++ + +Y + G+
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS--VAVRLGFVGDEFCESGFITLYCKAGE 167
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
E+AR+VFDE P + +W ++I G RA +A+ +F DM R SG P++FT+ S+
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKR--SGLEPDDFTMVSVT 225
Query: 188 KCCGLIPSYGDGRQVHGCCW--KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
CG + Q+H C K ++ + +SL+DMY +CG + A +F+E+ R +
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEM-RQR 284
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
N VSW+++I F +M+ G + T+ +L + G +E+GK
Sbjct: 285 NVVSWSSMI--VGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK- 341
Query: 306 LHGHMLKSGRKLVGYVGN--TLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQ 362
+ M+KS +L + + ++ + ++ G + +A+KV + + +K +V+ ++ G +
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 363 HGFGKEAVVLFKQMLRDGIEP-NDITFLSLLTACSHAGLLDEGERYFQLMR 412
G + A + M+ +EP ND ++ L + G+ + ER +LM+
Sbjct: 402 FGDVEMAEWVAPYMVE--LEPWNDGVYVVLANVYALRGMWKDVERVRKLMK 450
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 46 IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
II N R+ + + + R +EPD + +C LG L +H L
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
+ + D+++ NS++ MY +CG ++ A +F+EM ++ V+W+SMI GYA N ++AL
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSS----- 220
F M G RPN+ T ++ C VHG + G + S
Sbjct: 309 FRQMRE--FGVRPNKITFVGVLSAC-----------VHGGLVEEGKTYFAMMKSEFELEP 355
Query: 221 -------LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
+VD+ +R G L EA+ V +E+ N + W L+
Sbjct: 356 GLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 239/486 (49%), Gaps = 16/486 (3%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
DL PD + L K+C+ + +G +HS + D+ + V+ MYA
Sbjct: 67 DLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQ--IWRFGFCADMYVSTGVVDMYA 124
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+ G + AR FDEMP++ V+WT++I+GY + A LF M N +
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAM-M 183
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
VK + + R++ + V ++++ Y + A+ +FD +
Sbjct: 184 DGFVKSGDMTSA----RRL----FDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ-REGYGVTEFTYSALLCSASSVGSLEQ 302
+N VSWN +I LF +MQ + T ++L + S G+L
Sbjct: 236 -RNLVSWNTMIGGYCQNKQPQEGIR--LFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 303 GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
G+W H + + V +L MY+K G I A+++FD + + V S N+M+ GYA
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
+G + A+ LF M+ + +P++IT L+++TAC+H GL++EG ++F +MR+ G+ K+ H
Sbjct: 353 NGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEH 411
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
Y +VDLLGRAG L A I M EP I + L A +K IE +K EL+
Sbjct: 412 YGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELE 471
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAH 542
P G +VLL N+YA+ RW + ++ +M+ + KKE CS +EI V F+S D H
Sbjct: 472 PQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTH 531
Query: 543 PQKDKI 548
P + I
Sbjct: 532 PHRRSI 537
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 179/354 (50%), Gaps = 14/354 (3%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKD-TVTWTSMITGYAQNERAVDALVLF 166
+ ++ I L + A + +AR++FD+ P +D + SMI Y + + D+ L+
Sbjct: 6 IETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALY 65
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
D LR + P+ FT ++L K C L G Q+H W+ GFC +++V + +VDMYA
Sbjct: 66 RD-LRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 227 RCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
+ G +G A+ FDE+ ++EVSW ALI LF +M V
Sbjct: 125 KFGKMGCARNAFDEMPH-RSEVSWTALI--SGYIRCGELDLASKLFDQMPHVKDVV---I 178
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV 346
Y+A++ G + + L M + + ++ + T++H Y I ARK+FD +
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEM--THKTVITWT--TMIHGYCNIKDIDAARKLFDAMP 234
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQM-LRDGIEPNDITFLSLLTACSHAGLLDEGE 405
+ ++VS N+M+ GY Q+ +E + LF++M ++P+D+T LS+L A S G L GE
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 406 RYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+++ ++ KV I+D+ + G +++A + M E A W A++
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEM-PEKQVASWNAMI 347
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 264/524 (50%), Gaps = 27/524 (5%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
+++ EPD +LK CT + + GR VH + + D+ D + + NS++ MY+
Sbjct: 215 EMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD-VFVCNSLIDMYS 273
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+ D++ A +VFDE ++ V+W S++ G+ N+R +AL +F M++ +E T+
Sbjct: 274 KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ--EAVEVDEVTV 331
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
SL++ C + +HG + G+ N SSL+D Y C + +A V D +
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSM-T 390
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+K+ VS + +I +F M+ +T + LL + S L
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAIS--IFCHMRDTPNAITVIS---LLNACSVSADLRTS 445
Query: 304 KWLHGHMLKSGRKLVGY-VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
KW HG ++ + VG +++ YAK G+I AR+ FD++ + +++S ++ YA
Sbjct: 446 KWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAI 505
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
+G +A+ LF +M + G PN +T+L+ L+AC+H GL+ +G F+ M + +P + H
Sbjct: 506 NGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQH 565
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGML--IEPTAAIWGALL-GASWMHKKIEMGAYAAQKVF 479
Y+ IVD+L RAG +D A+ I+ + ++ A+ WGA+L G KK+ + + +V
Sbjct: 566 YSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL 625
Query: 480 ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSND 539
EL+P S ++L ++ +A+ W++ A +R+++K+ ++ S V N F++ D
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGD 685
Query: 540 IAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELN 583
KL+Q E+ V + H + +D +N
Sbjct: 686 --------------KLSQSDSELNDVVQSLHRCMKLDDTAGPIN 715
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 23/396 (5%)
Query: 72 EPDRALYQRLLKTCTKL---GKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
EP+ + ++ C L G+ G ++ S F + +QNS+L MYA L
Sbjct: 124 EPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISS-------VQNSILCMYADSDSL 176
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
AR++FDEM +D ++W+ +I Y Q++ V L LF +M+ + P+ T++S++K
Sbjct: 177 S-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK-TEPDCVTVTSVLK 234
Query: 189 CCGLIPSYGDGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
C ++ GR VHG + GF +VFV +SL+DMY++ + A VFDE +N
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET-TCRNI 293
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
VSWN+++ +F M +E V E T +LL K +H
Sbjct: 294 VSWNSIL--AGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIH 351
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G +++ G + ++L+ Y + DA V D + DVVSC++M+ G A G
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE--RYFQLMRQFGVEPKVSHYAK 425
EA+ +F M RD PN IT +SLL ACS + L + + R + +S
Sbjct: 412 EAISIFCHM-RD--TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTS 467
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGA 461
IVD + G ++ A + + E W ++ A
Sbjct: 468 IVDAYAKCGAIEMARRTFD-QITEKNIISWTVIISA 502
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 176/384 (45%), Gaps = 32/384 (8%)
Query: 66 IDRGAVE-PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
I R V+ D ++ + K C KL L +G NS+ Y +
Sbjct: 35 IQRAGVQFNDPFVFPIVFKACAKLSWLFQG---------------------NSIADFYMK 73
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
CGDL + FD M ++D+V+W ++ G + L F + G PN TL
Sbjct: 74 CGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW--GFEPNTSTLV 131
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
++ C + + DG ++HG + GFC V +S++ MYA L A+ +FDE+
Sbjct: 132 LVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE- 187
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLEQG 303
++ +SW+ +I LF +M E + T +++L + + + ++ G
Sbjct: 188 RDVISWSVVI--RSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
Query: 304 KWLHGHMLKSGRKLVG-YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQ 362
+ +HG ++ G L +V N+L+ MY+K + A +VFD ++VS NS+L G+
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 363 HGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
+ EA+ +F M+++ +E +++T +SLL C + ++ + G E
Sbjct: 306 NQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVA 365
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGM 446
+ ++D L+D A + ++ M
Sbjct: 366 LSSLIDAYTSCSLVDDAGTVLDSM 389
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 246/496 (49%), Gaps = 38/496 (7%)
Query: 85 CTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTV 144
C + +L + +H+ + + V Q + GD+++A + ++ +
Sbjct: 18 CKSMSELYK---IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNY 74
Query: 145 TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHG 204
W +I G++ + ++ ++ MLR G P+ T L+K + + G +H
Sbjct: 75 GWNFVIRGFSNSRNPEKSISVYIQMLR--FGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXX 264
K G ++F+ ++L+ MY A+ +FDE+ KN V+WN+++
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH-KNLVTWNSILDAYAKSGDVV 191
Query: 265 XX-----------------------------XXXXLFAKMQREGYG-VTEFTYSALLCSA 294
+F +M R G E T +++C+
Sbjct: 192 SARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR--LVKVDVVS 352
+ +G+L +GK +H ++L L + +L+ MYAK GSI DA VF R + + D +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 353 CNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR 412
N+++ G A HGF +E++ LF +M I+P++ITFL LL ACSH GL+ E +F+ ++
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
+ G EPK HYA +VD+L RAGL+ A FI M I+PT ++ GALL H +E+
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 431
Query: 473 YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
+K+ EL P G +V LAN+YA +++ A ++R+ M+ G+KK S ++++ +
Sbjct: 432 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Query: 533 HVFVSNDIAHPQKDKI 548
H F+++D H DKI
Sbjct: 492 HRFIAHDKTHFHSDKI 507
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 219/395 (55%), Gaps = 16/395 (4%)
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG-DGRQVHGCCWKHGF 211
Y ++ + AL+ F R S S + F++ +K + DGRQ+H K GF
Sbjct: 38 YLESGEPIKALLDFRHRFRQ-SPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGF 96
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXL 271
+ + +SLV Y+ G + A+ VFDE +N V W A+I L
Sbjct: 97 NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIE--L 154
Query: 272 FAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMY 329
F +M+ E + + L + + +G+++ G+ ++ +K R+L + N+LL+MY
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML-----RDG-IEP 383
KSG ARK+FD ++ DV + SM+ GYA +G +E++ LFK+M +D I P
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITP 274
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
ND+TF+ +L ACSH+GL++EG+R+F+ ++ + ++P+ +H+ +VDL R+G L A F
Sbjct: 275 NDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEF 334
Query: 443 IEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRW 502
I M I+P IW LLGA +H +E+G +++FELD + G +V L+NIYAS G W
Sbjct: 335 INQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMW 394
Query: 503 KEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS 537
E + +R ++ ++ P SW+E+ + ++ FVS
Sbjct: 395 DEKSKMRDRVRK---RRMPGKSWIELGSIINEFVS 426
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+E D + L C LG ++ G ++S + + + DL ++NS+L MY + G+ E
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS----RPNEFTLSSL 186
AR++FDE KD T+TSMI GYA N +A ++L LF M PN+ T +
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 187 VKCCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
+ C +G R + +VD++ R G L +A +++
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 246 NEVSWNALI 254
N V W L+
Sbjct: 343 NTVIWRTLL 351
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 68/363 (18%)
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK-DTVTWTSMIT 151
+GR +H+ L++ + IQ S++ Y+ GD+++ARQVFDE P K + V WT+MI+
Sbjct: 83 DGRQIHA--LVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 152 GYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG- 210
Y +NE +V+A+ LF M + ++ + C + + G +++ K
Sbjct: 141 AYTENENSVEAIELFKRM--EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKR 198
Query: 211 -FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX 269
++ + +SL++MY + G +A+ +FDE R K+ ++ ++I
Sbjct: 199 RLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR-KDVTTYTSMI--FGYALNGQAQESL 255
Query: 270 XLFAKM----QREGYGVT--EFTYSALLCSASSVGSLEQGK-----WLHGHMLKSGRKLV 318
LF KM Q + +T + T+ +L + S G +E+GK + + LK
Sbjct: 256 ELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF 315
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
G ++ ++ +SG + DA + +++
Sbjct: 316 G----CMVDLFCRSGHLKDAHEFINQM--------------------------------- 338
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGE----RYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
I+PN + + +LL ACS G ++ GE R F+L R V Y + ++ G
Sbjct: 339 -PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRD-----HVGDYVALSNIYASKG 392
Query: 435 LLD 437
+ D
Sbjct: 393 MWD 395
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 229/447 (51%), Gaps = 48/447 (10%)
Query: 69 GAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
G V PD+ + +LK C EGR +H F+ + D+ ++N+++ +Y R G
Sbjct: 134 GPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFI--KSGLVTDVFVENTLVNVYGRSGYF 191
Query: 129 EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
E AR+V D MP +D V+W S+++ Y + +A LF +M
Sbjct: 192 EIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM------------------- 232
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEV 248
+ R V W ++ YA G + EA+ VFD + ++ V
Sbjct: 233 ---------EERNVES--WNF-----------MISGYAAAGLVKEAKEVFDSMP-VRDVV 269
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE-FTYSALLCSASSVGSLEQGKWLH 307
SWNA++ +F KM + + FT ++L + +S+GSL QG+W+H
Sbjct: 270 SWNAMV--TAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
++ K G ++ G++ L+ MY+K G I A +VF K DV + NS++ + HG GK
Sbjct: 328 VYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGK 387
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKI 426
+A+ +F +M+ +G +PN ITF+ +L+AC+H G+LD+ + F++M + VEP + HY +
Sbjct: 388 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLLGR G ++ A + + + + + +LLGA ++E A ++ EL+ S
Sbjct: 448 VDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDS 507
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMK 513
+ ++N+YAS GRW++ + R+ M+
Sbjct: 508 SGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 19/251 (7%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG--------RKLVGYVG 322
L K + V T +L SL + + H MLK+G KLV +
Sbjct: 23 LLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAA 82
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
+ ++S A + +R+ + + NS++ YA + A+ +F++ML +
Sbjct: 83 TN-----PEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVF 137
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
P+ +F +L AC+ +EG + L + G+ V +V++ GR+G + A
Sbjct: 138 PDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKV 197
Query: 443 IEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF-ELDPFYSGAHVLLANIYASAGR 501
++ M + A W +LL A ++ K + A+ +F E++ + + + YA+AG
Sbjct: 198 LDRMPVR-DAVSWNSLLSA-YLEKGL---VDEARALFDEMEERNVESWNFMISGYAAAGL 252
Query: 502 WKEAANIRKMM 512
KEA + M
Sbjct: 253 VKEAKEVFDSM 263
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 231/473 (48%), Gaps = 39/473 (8%)
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNE--RAVDALVLFPDMLRGGSGSR 177
F R +L +AR +FD +T + +++T Y+ + A A F M+ S R
Sbjct: 65 FCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMV-NRSVPR 123
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR-CGFLGEAQA 236
PN F ++K + S VH +K GF V V ++L+ YA + A+
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 237 VFDELGRWKNEVSWNALIX-----------------------------XXXXXXXXXXXX 267
+FDE+ +N VSW A++
Sbjct: 184 LFDEMSE-RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE 242
Query: 268 XXXLFAKMQRE-GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLL 326
LF +M E E T +L + + G+L+ K +H + +V N+L+
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 327 HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR---DGIEP 383
+Y K G++ +A VF K + + NSM+ +A HG +EA+ +F++M++ + I+P
Sbjct: 303 DLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
+ ITF+ LL AC+H GL+ +G YF LM +FG+EP++ HY ++DLLGRAG D A+
Sbjct: 363 DHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 443 IEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRW 502
+ M ++ AIWG+LL A +H +++ A + + L+P G ++AN+Y G W
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNW 482
Query: 503 KEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKL 555
+EA RKM+K K P S +EI+N VH F S D +HP+ ++I + + L
Sbjct: 483 EEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 32/220 (14%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFL---------------------- 102
+++R P+ +Y +LK+ L LVH+H
Sbjct: 116 MVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSV 175
Query: 103 --------LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYA 154
L + ++V ++L YAR GD+ +A +F++MP +D +W +++
Sbjct: 176 SHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACT 235
Query: 155 QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDN 214
QN ++A+ LF M+ S RPNE T+ ++ C + + +H ++ +
Sbjct: 236 QNGLFLEAVSLFRRMINEPS-IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSD 294
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
VFV +SLVD+Y +CG L EA +VF ++ K+ +WN++I
Sbjct: 295 VFVSNSLVDLYGKCGNLEEASSVF-KMASKKSLTAWNSMI 333
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 6/193 (3%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
+I+ ++ P+ +L C + G L+ + +H+ D+ D+ + NS++ +Y +
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHA--FAYRRDLSSDVFVSNSLVDLYGK 307
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR-GGSGSRPNEFTL 183
CG+LE A VF K W SMI +A + R+ +A+ +F +M++ + +P+ T
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 184 SSLVKCC--GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
L+ C G + S G G + G + L+D+ R G EA V +
Sbjct: 368 IGLLNACTHGGLVSKGRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTM 426
Query: 242 GRWKNEVSWNALI 254
+E W +L+
Sbjct: 427 KMKADEAIWGSLL 439
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 242/508 (47%), Gaps = 50/508 (9%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN-------- 105
R+ K + V + + P +L+ C K+ + +G+ +H+ L
Sbjct: 83 RKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQ 142
Query: 106 ----------------PDVRDDL-----VIQNSVLFMYARCGDLEHARQVFDEMPNKDTV 144
DD+ V NS+L Y G+L+ AR+VFD++P KD V
Sbjct: 143 TGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAV 202
Query: 145 TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC--CGLIPSYGDGR-Q 201
+W +I+ YA+ +A LF M S + V C L +Y D Q
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLKSPASW--NILIGGYVNCREMKLARTYFDAMPQ 260
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXX 261
+G W +++ Y + G + A+ +F + + K+++ ++A+I
Sbjct: 261 KNGVSW-----------ITMISGYTKLGDVQSAEELFRLMSK-KDKLVYDAMIACYTQNG 308
Query: 262 XXXXXXXXXLFAKM-QREGY-GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
LFA+M +R Y E T S+++ + S +G+ G W+ ++ + G K+
Sbjct: 309 KPKDALK--LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
+ +L+ +Y K G + A K+F L K D VS ++M++G +G EA LF M+
Sbjct: 367 LLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEK 426
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
I PN +TF LL+A SH+GL+ EG + F M+ +EP HY +VD+LGRAG L+ A
Sbjct: 427 KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEA 486
Query: 440 MSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASA 499
I+ M ++P A +WGALL AS +H +E G A +L+ +G LA IY+S
Sbjct: 487 YELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSV 546
Query: 500 GRWKEAANIRKMMKDSGLKKEPACSWVE 527
GRW +A +R +K+ L K CSWVE
Sbjct: 547 GRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 200/457 (43%), Gaps = 31/457 (6%)
Query: 91 LREGRLVHSHFLLQNPDVRDDLVIQNSVLFM--YARCGDLEHARQVFDEMPNKDTVTWTS 148
L + + VH+ ++ + + +++ ++ F ++R + + +++ D+ +W
Sbjct: 16 LEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSR-NIVTYVKRILKGFNGHDSFSWGC 74
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK 208
++ +Q+ + + + ++ DM SG P+ ++S+++ CG + + DG+ +H K
Sbjct: 75 LVRFLSQHRKFKETVDVYIDM--HNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK 132
Query: 209 HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXX 268
+G C V+V + LV +Y+R G++ A+ FD++ KN VSWN+L+
Sbjct: 133 NGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAE-KNTVSWNSLLHGYLESGELDEARR 191
Query: 269 -------------XXLFAKMQREG-YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
+ + ++G G +SA+ + + ++ G +++ +K
Sbjct: 192 VFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLA 251
Query: 315 RKLV-------GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
R G T++ Y K G + A ++F + K D + ++M+ Y Q+G K
Sbjct: 252 RTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPK 311
Query: 368 EAVVLFKQMLRDG--IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAK 425
+A+ LF QML I+P++IT S+++A S G G + + G++
Sbjct: 312 DALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTS 371
Query: 426 IVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFY 485
++DL + G +A + + T + ++G E + + + P
Sbjct: 372 LIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPN 431
Query: 486 SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
L + Y+ +G +E MKD L EP+
Sbjct: 432 VVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL--EPS 466
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 234/464 (50%), Gaps = 62/464 (13%)
Query: 68 RGAVEPDRALYQRLLKTC--TKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
RG VE R L+ ++ C G+ RE R ++V NS++ Y +
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRE-RFCK------------NVVSWNSMIKAYLKV 294
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
GD+ AR +FD+M ++DT++W +MI GY R DA LF +M PN
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM--------PN------ 340
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
R H W + +V YA G + A+ F++ K
Sbjct: 341 --------------RDAHS--W-----------NMMVSGYASVGNVELARHYFEKTPE-K 372
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ VSWN++I LF +M EG T ++LL +++ + +L G
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVD--LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHG 364
+H ++K+ V V N L+ MY++ G I ++R++FD + +K +V++ N+M+ GYA HG
Sbjct: 431 MHQIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHY 423
EA+ LF M +GI P+ ITF+S+L AC+HAGL+DE + F +M + +EP++ HY
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
+ +V++ G + AM I M EP +WGALL A ++ + + AA+ + L+P
Sbjct: 550 SSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP 609
Query: 484 FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
S +VLL N+YA G W EA+ +R M+ +KKE SWV+
Sbjct: 610 ESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 175/401 (43%), Gaps = 55/401 (13%)
Query: 109 RDDLVIQNSVLFMYARCGD---LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
+ D+V N+++ Y CG LE AR++FDEMP++D+ +W +MI+GYA+N R +AL+L
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 166 FPDMLRGG--------SGSRPNEFTLSSLV-----------KCCGLIPSYGDGRQVHGCC 206
F M +G N S++V C L+ ++
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 207 W--------KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---------GRW----- 244
W G D V+ ++L+ Y + G + A+ +FD++ G +
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
KN VSWN++I LF +M+ +++ ++ V +E
Sbjct: 279 KNVVSWNSMI--KAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAF 332
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
L M + N ++ YA G++ AR F++ + VS NS++ Y ++
Sbjct: 333 ALFSEMPNRD----AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
KEAV LF +M +G +P+ T SLL+A + L G + Q++ + V P V +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK-TVIPDVPVHN 447
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMH 465
++ + R G + + + M ++ W A++G H
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFH 488
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 129/292 (44%), Gaps = 38/292 (13%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
N L R G + AR +F+++ ++TVTW +MI+GY + A LF M
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM------ 97
Query: 176 SRPNEFTLSSLVK---CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
+ + T ++++ CG I + R++ + + F ++++ YA+ +G
Sbjct: 98 PKRDVVTWNTMISGYVSCGGIRFLEEARKL----FDEMPSRDSFSWNTMISGYAKNRRIG 153
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
EA +F+++ +N VSW+A+I LF KM + AL+
Sbjct: 154 EALLLFEKMPE-RNAVSWSAMI--TGFCQNGEVDSAVVLFRKMPVKDSS----PLCALVA 206
Query: 293 SASSVGSLEQGKWLHGHM--LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV-- 348
L + W+ G L SGR+ + Y NTL+ Y + G + AR +FD++ +
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG 266
Query: 349 -------------DVVSCNSMLIGYAQHGFGKEAVVLFKQML-RDGIEPNDI 386
+VVS NSM+ Y + G A +LF QM RD I N +
Sbjct: 267 DDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTM 318
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 9/141 (6%)
Query: 55 RSKTGLHVLDLIDRGAVE---PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDD 111
++K +DL R +E PD LL T L LR G +H + V D
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV---KTVIPD 442
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMP-NKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+ + N+++ MY+RCG++ +R++FDEM ++ +TW +MI GYA + A +AL LF M
Sbjct: 443 VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM- 501
Query: 171 RGGSGSRPNEFTLSSLVKCCG 191
+G P+ T S++ C
Sbjct: 502 -KSNGIYPSHITFVSVLNACA 521
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 236/445 (53%), Gaps = 18/445 (4%)
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS-RPNEFTLSSLVK 188
+A +FD + ++ + +MI +++ + L F M++ P+ T L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 189 CCGLIPSYGDGRQVHGCCW--KHG-FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
C + G+Q+H CW K+G F + V + ++ +Y L +A+ VFDE+ +
Sbjct: 125 ACLKACFFSVGKQIH--CWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQ-P 181
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ V W+ L+ +F +M G EF+ + L + + VG+L QGKW
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLE--VFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKW 239
Query: 306 LHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
+H +K R + +VG L+ MYAK G I A +VF++L + +V S +++ GYA +
Sbjct: 240 IH-EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAY 298
Query: 364 GFGKEAVVLFKQMLR-DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVS 421
G+ K+A ++ R DGI+P+ + L +L AC+H G L+EG + M ++G+ PK
Sbjct: 299 GYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHE 358
Query: 422 HYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
HY+ IVDL+ RAG LD A+ IE M ++P A++WGALL HK +E+G A Q + +L
Sbjct: 359 HYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDL 418
Query: 482 DP----FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVS 537
+ A V L+NIY S R EA +R M++ G++K P S +E++ V FVS
Sbjct: 419 EKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVS 478
Query: 538 NDIAHPQKDKIIKMWEKLNQEIKEI 562
D++HP +I + L+ + +I
Sbjct: 479 GDVSHPNLLQIHTLIHLLSVDASQI 503
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 5/185 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+ P + L+ C K G+ +H ++++N D +Q VL +Y L
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHC-WVVKNGVFLSDGHVQTGVLRIYVEDKLLFD 170
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFDE+P D V W ++ GY + + L +F +ML G P+EF++++ + C
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV--RGIEPDEFSVTTALTAC 228
Query: 191 GLIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
+ + G+ +H K + + +VFVG++LVDMYA+CG + A VF++L R +N S
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTR-RNVFS 287
Query: 250 WNALI 254
W ALI
Sbjct: 288 WAALI 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 35 DNVPELDKSYYIIDDRNLLR--RSKTGLHVL-DLIDRGAVEPDRALYQRLLKTCTKLGKL 91
D +P+ D + + +R GL V +++ RG +EPD L C ++G L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEFSVTTALTACAQVGAL 234
Query: 92 REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMIT 151
+G+ +H F+ + + D+ + +++ MYA+CG +E A +VF+++ ++ +W ++I
Sbjct: 235 AQGKWIHE-FVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIG 293
Query: 152 GYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR-QVHGCCWKHG 210
GYA A A D + G +P+ L ++ C +GR + ++G
Sbjct: 294 GYAAYGYAKKATTCL-DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 211 FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
S +VD+ R G L +A + +++ W AL+
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 234/462 (50%), Gaps = 39/462 (8%)
Query: 94 GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGY 153
G+L+HS + V D+++ +S++ MY +CG + AR+VFDEMP ++ TW +MI GY
Sbjct: 65 GKLLHSESI--KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
Query: 154 AQNERAVDALVLFPDM-----------LRGGSGSRPN-----------EFTLSSLVKCCG 191
N AV A LF ++ + G G R F L ++
Sbjct: 123 MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV 182
Query: 192 LIPSYGDGRQVHGCCWKHGFCD----NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
++ Y + R++ + F D N FV S ++ Y R G + EA+A+F + ++
Sbjct: 183 MLGVYVNNRKMEDA--RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFA-RDL 239
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
V WN LI F MQ EGY T S++L + + G L+ G+ +H
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDA--FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVH 297
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
+ G +L +V N L+ MYAK G + +A VF+ + V CNSM+ A HG GK
Sbjct: 298 SLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGK 357
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
EA+ +F M ++P++ITF+++LTAC H G L EG + F M+ V+P V H+ ++
Sbjct: 358 EALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Query: 428 DLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE----LDP 483
LLGR+G L A ++ M ++P + GALLGA +H EM A K+ E +
Sbjct: 418 HLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM-AEQVMKIIETAGSITN 476
Query: 484 FYSGAHVL-LANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
YS H+ ++N+YA RW+ A +R M+ GL+K P S
Sbjct: 477 SYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 149/332 (44%), Gaps = 31/332 (9%)
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCC 206
+++I + + ALVL+ + R G P L L C ++P G+ +H
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGV-YFPGWVPLI-LRACACVVPRVVLGKLLHSES 72
Query: 207 WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXX 266
K G C +V VGSSL+ MY +CG + A+ VFDE+ +N +WNA+I
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPE-RNVATWNAMI--GGYMSNGDAV 129
Query: 267 XXXXLFAKMQR-----------EGYGV--------TEFTYSALLCSASSVGSLEQGKWLH 307
LF ++ +GYG F S+ G +++
Sbjct: 130 LASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVN 189
Query: 308 GHMLKSGRKLV-------GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
++ RK +V + ++ Y + G + +AR +F R+ D+V N+++ GY
Sbjct: 190 NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY 249
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
AQ+G+ +A+ F M +G EP+ +T S+L+AC+ +G LD G L+ G+E
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQ 309
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA 452
++D+ + G L+ A S E + + A
Sbjct: 310 FVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 4/183 (2%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
EPD +L C + G+L GR VHS L+ + + + + N+++ MYA+CGDLE+A
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHS--LINHRGIELNQFVSNALIDMYAKCGDLENA 328
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
VF+ + + SMI+ A + + +AL +F M +P+E T +++ C
Sbjct: 329 TSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM--ESLDLKPDEITFIAVLTACV 386
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
+G ++ NV L+ + R G L EA + E+ N+
Sbjct: 387 HGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLG 446
Query: 252 ALI 254
AL+
Sbjct: 447 ALL 449
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 249/498 (50%), Gaps = 44/498 (8%)
Query: 97 VHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN 156
+H+H L D DL +Q +L +L +AR++FD N T + +I Y +
Sbjct: 7 LHAHCLRTGVDETKDL-LQRLLLI-----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 157 ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVF 216
+ +++VL+ L G RP+ T + + S R +H ++ GF + F
Sbjct: 61 HQPHESIVLYN--LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSF 118
Query: 217 VGSSLVDMYARCGFLGEAQAVFDELGR-----W-------------------------KN 246
++L+ YA+ G L A+ VFDE+ + W KN
Sbjct: 119 CCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKN 178
Query: 247 EVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE-GYGVTEFTYSALLCSASSVGSLEQGKW 305
SW +I +F M+++ T ++L + +++G LE G+
Sbjct: 179 VTSWTTVISGFSQNGNYSEALK--MFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHG 364
L G+ ++G YV N + MY+K G I A+++F+ L + ++ S NSM+ A HG
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF-GVEPKVSHY 423
EA+ LF QMLR+G +P+ +TF+ LL AC H G++ +G+ F+ M + + PK+ HY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDP 483
++DLLGR G L A I+ M ++P A +WG LLGA H +E+ A++ +F+L+P
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 484 FYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW-VEIENSVHVFVSNDIAH 542
G V+++NIYA+ +W +RK+MK + K S+ VE+ VH F D +H
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSH 476
Query: 543 PQKDKIIKMWEKLNQEIK 560
P+ +I ++ E++ + +K
Sbjct: 477 PRSYEIYQVLEEIFRRMK 494
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+V+P+ +L C LG+L GR + + + D++ + N+ + MY++CG ++
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGY--ARENGFFDNIYVCNATIEMYSKCGMID 267
Query: 130 HARQVFDEMPN-KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
A+++F+E+ N ++ +W SMI A + + +AL LF MLR G +P+ T L+
Sbjct: 268 VAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLR--EGEKPDAVTFVGLLL 325
Query: 189 CC---GLIPS----YGDGRQVHGCCWK--HGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
C G++ + +VH K H C ++D+ R G L EA +
Sbjct: 326 ACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC--------MIDLLGRVGKLQEAYDLIK 377
Query: 240 ELGRWKNEVSWNALI 254
+ + V W L+
Sbjct: 378 TMPMKPDAVVWGTLL 392
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 232/426 (54%), Gaps = 16/426 (3%)
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS-RPNEFTLSSLVK 188
+A +FD + ++ + +MI +++ + L F M++ P+ T L+
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 189 CCGLIPSYGDGRQVHGCCW--KHG-FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
C + G+Q+H CW K+G F + V + ++ +Y L +A+ VFDE+ +
Sbjct: 125 ACLKACFFSVGKQIH--CWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQ-P 181
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+ V W+ L+ +F +M +G EF+ + L + + VG+L QGKW
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLE--VFREMLVKGLEPDEFSVTTALTACAQVGALAQGKW 239
Query: 306 LHGHMLK-SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H + K S + +VG L+ MYAK G I A +VF +L + +V S +++ GYA +G
Sbjct: 240 IHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYG 299
Query: 365 FGKEAVVLFKQMLR-DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSH 422
+ K+A+ +++ R DGI+P+ + L +L AC+H G L+EG + M ++ + PK H
Sbjct: 300 YAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEH 359
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
Y+ IVDL+ RAG LD A++ IE M ++P A++WGALL HK +E+G A + + +L+
Sbjct: 360 YSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLE 419
Query: 483 ----PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
A V L+NIY S R EA+ +R M++ G++K P S +E++ +V FVS
Sbjct: 420 KGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSG 479
Query: 539 DIAHPQ 544
D++HP
Sbjct: 480 DVSHPN 485
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+ P + L+ C K G+ +H ++++N D +Q VL +Y L
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHC-WVVKNGVFLSDSHVQTGVLRIYVEDKLLLD 170
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
AR+VFDE+P D V W ++ GY + + L +F +ML G P+EF++++ + C
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV--KGLEPDEFSVTTALTAC 228
Query: 191 GLIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
+ + G+ +H K + + +VFVG++LVDMYA+CG + A VF +L R +N S
Sbjct: 229 AQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTR-RNVFS 287
Query: 250 WNALI 254
W ALI
Sbjct: 288 WAALI 292
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 35 DNVPELDKSYYIIDDRNLLR--RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
D +P+ D + + +R GL V + +EPD L C ++G L
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITG 152
+G+ +H F+ + + D+ + +++ MYA+CG +E A +VF ++ ++ +W ++I G
Sbjct: 236 QGKWIHE-FVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 294
Query: 153 YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ-VHGCCWKHGF 211
YA A A+ + R G +P+ L ++ C +GR + ++
Sbjct: 295 YAAYGYAKKAMTCLERLER-EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEI 353
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
S +VD+ R G L +A + +++ W AL+
Sbjct: 354 TPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALL 396
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 222/422 (52%), Gaps = 14/422 (3%)
Query: 113 VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
++ N+ + MY+ D A +VF+ + KD VTW +MI+ Y Q + A+ ++ M
Sbjct: 324 LVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM--H 381
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
G +P+EFT SL+ + V C K G + + ++L+ Y++ G +
Sbjct: 382 IIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEISNALISAYSKNGQIE 438
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV--TEFTYSAL 290
+A +F+ R KN +SWNA+I F+ + + +T S L
Sbjct: 439 KADLLFERSLR-KNLISWNAIISGFYHNGFPFEGLER--FSCLLESEVRILPDAYTLSTL 495
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
L S SL G H ++L+ G+ +GN L++MY++ G+I ++ +VF+++ + DV
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQ 409
VS NS++ Y++HG G+ AV +K M +G + P+ TF ++L+ACSHAGL++EG F
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN 615
Query: 410 LMRQF-GVEPKVSHYAKIVDLLGRAGLLDRAMSF--IEGMLIEPTAAIWGALLGASWMHK 466
M +F GV V H++ +VDLLGRAG LD A S I I +W AL A H
Sbjct: 616 SMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Query: 467 KIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
+++G A+ + E + +V L+NIYA AG WKEA R+ + G K+ CSW+
Sbjct: 676 DLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Query: 527 EI 528
+
Sbjct: 736 RL 737
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 175/369 (47%), Gaps = 33/369 (8%)
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
+LY+RL + K E + PDV ++L + GD+E+A +VF
Sbjct: 100 SLYERLGNLASLKKKFDE---------IDEPDVYS----WTTLLSASFKLGDIEYAFEVF 146
Query: 136 DEMPNKDTVT-WTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIP 194
D+MP +D V W +MITG ++ ++ LF +M + G R ++F ++++ C
Sbjct: 147 DKMPERDDVAIWNAMITGCKESGYHETSVELFREMHK--LGVRHDKFGFATILSMC---- 200
Query: 195 SYGD---GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELG-RWKNEVSW 250
YG G+QVH K GF V ++L+ MY C + +A VF+E +++V++
Sbjct: 201 DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTF 260
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
N +I +F KM T+ T+ +++ S S G +HG
Sbjct: 261 NVVIDGLAGFKRDESLL---VFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLA 314
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
+K+G + V N + MY+ A KVF+ L + D+V+ N+M+ Y Q GK A+
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
++K+M G++P++ TF SLL LD E + +FG+ K+ ++
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLATSLD---LDVLEMVQACIIKFGLSSKIEISNALISAY 431
Query: 431 GRAGLLDRA 439
+ G +++A
Sbjct: 432 SKNGQIEKA 440
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 172/396 (43%), Gaps = 43/396 (10%)
Query: 46 IIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN 105
+I N + K+ + V + V+PD + LL T L L + F L +
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSS 419
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
+ I N+++ Y++ G +E A +F+ K+ ++W ++I+G+ N + L
Sbjct: 420 K-----IEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLER 474
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
F +L P+ +TLS+L+ C S G Q H +HG +G++L++MY
Sbjct: 475 FSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMY 534
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE- 284
++CG + + VF+++ K+ VSWN+LI + MQ EG + +
Sbjct: 535 SQCGTIQNSLEVFNQMSE-KDVVSWNSLISAYSRHGEGENAVNT--YKTMQDEGKVIPDA 591
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
T+SA+L + S G +E+G + M+ + G + N
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMV----EFHGVIRN--------------------- 626
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
VD SC L+G A H E++V ++ I + +L +AC+ G L G
Sbjct: 627 ---VDHFSCLVDLLGRAGHLDEAESLV---KISEKTIGSRVDVWWALFSACAAHGDLKLG 680
Query: 405 ERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ + LM + +P V Y ++ ++ AG+ A
Sbjct: 681 KMVAKLLMEKEKDDPSV--YVQLSNIYAGAGMWKEA 714
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 226/449 (50%), Gaps = 12/449 (2%)
Query: 82 LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE---M 138
LK C+ G L G+ +H + + ++++ MY+ CG L +A VF +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVV--KSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
N W SM++G+ NE AL L + + S + +TLS +K C +
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ--SDLCFDSYTLSGALKICINYVNLRL 360
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
G QVH G+ + VGS LVD++A G + +A +F L K+ ++++ LI
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCV 419
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
LF ++ + G +F S +L SS+ SL GK +HG +K G +
Sbjct: 420 KSGFNSLAFY--LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
L+ MY K G I + +FD +++ DVVS +++G+ Q+G +EA F +M+
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLD 437
GIEPN +TFL LL+AC H+GLL+E + M+ ++G+EP + HY +VDLLG+AGL
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 438 RAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYA 497
A I M +EP IW +LL A HK + A+K+ + P + L+N YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 498 SAGRWKEAANIRKMMKDSGLKKEPACSWV 526
+ G W + + +R+ K G KE SW+
Sbjct: 658 TLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 203/455 (44%), Gaps = 44/455 (9%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
++D + +Y +LK C +G ++ G LV+ +N +R D+V+ NSV+ MY +
Sbjct: 97 MLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN--LRGDVVLMNSVVDMYVK 154
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM----------LRGGS 174
G L A F E+ + +W ++I+GY + +A+ LF M L G
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 175 GSRPNEFTLSSLVKC-------------CGLIP-SYGD----GRQVHGCCWKHGFCDNVF 216
+ + L LV+ CGL S+G G+Q+H C K G + F
Sbjct: 215 VDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPF 274
Query: 217 VGSSLVDMYARCGFLGEAQAVF--DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
S+L+DMY+ CG L A VF ++L + WN+++ L +
Sbjct: 275 AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML--SGFLINEENEAALWLLLQ 332
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
+ + +T S L + +L G +H ++ SG +L VG+ L+ ++A G+
Sbjct: 333 IYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGN 392
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
I DA K+F RL D+++ + ++ G + GF A LF+++++ G++ + ++L
Sbjct: 393 IQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV 452
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI 454
CS L G++ L + G E + +VD+ + G +D + +GML +
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 455 WGALLGAS----------WMHKKIEMGAYAAQKVF 479
G ++G + HK I +G + F
Sbjct: 513 TGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 170/399 (42%), Gaps = 39/399 (9%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D L L+ C K+ + G + +H + Q + ++ I N+V+ MY L A +
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQG--ISQNVFIANNVISMYVDFRLLSDAHK 61
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
VFDEM ++ VTWT+M++GY + + A+ L+ ML NEF S+++K CGL+
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLD-SEEEAANEFMYSAVLKACGLV 120
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-----WK--- 245
G V+ K +V + +S+VDMY + G L EA + F E+ R W
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 246 ----------------------NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
N VSWN LI +MQREG +
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLI---SGFVDKGSPRALEFLVRMQREGLVLD 237
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
F L + S G L GK LH ++KSG + + + L+ MY+ GS+ A VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 344 R---LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+ V V NSML G+ + + A+ L Q+ + + + T L C +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
L G + L+ G E + +VDL G + A
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSM 356
V + ++G+ + H++K G ++ N ++ MY +SDA KVFD + + ++V+ +M
Sbjct: 18 VQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIE-PNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
+ GY G +A+ L+++ML E N+ + ++L AC G + G ++ + +
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN 137
Query: 416 VEPKVSHYAKIVDLLGRAG-LLDRAMSFIEGMLIEPTAAIWGALL 459
+ V +VD+ + G L++ SF E ++ P++ W L+
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKE--ILRPSSTSWNTLI 180
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 220/419 (52%), Gaps = 7/419 (1%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERA 159
H L+ + +D+ + S++ Y+RCG L A +++ V TS+++ YA+
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 160 VDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGS 219
A+V F + + + L ++ C G +HG K G C V +
Sbjct: 329 DIAVVYFSKTRQ--LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVN 386
Query: 220 SLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
L+ MY++ + +F++L + +SWN++I +F +M G
Sbjct: 387 GLITMYSKFDDVETVLFLFEQL-QETPLISWNSVISGCVQSGRASTAFE--VFHQMMLTG 443
Query: 280 YGVTE-FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
+ + T ++LL S + L GK LHG+ L++ + +V L+ MYAK G+ A
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQA 503
Query: 339 RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
VF + + NSM+ GY+ G A+ + +M G++P++ITFL +L+AC+H
Sbjct: 504 ESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHG 563
Query: 399 GLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGA 457
G +DEG+ F+ M ++FG+ P + HYA +V LLGRA L A+ I M I+P +A+WGA
Sbjct: 564 GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGA 623
Query: 458 LLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
LL A +H+++E+G Y A+K+F LD G +VL++N+YA+ W + +R MMKD+G
Sbjct: 624 LLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 19/391 (4%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
P LL C + G + +GR VH + + D ++N+++ Y++C +L A
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHG--VAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
+F EM +K TV+W +MI Y+Q+ +A+ +F +M P V
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--------VTIIN 257
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWN 251
L+ ++ +H K G +++ V +SLV Y+RCG L A+ ++ + + V
Sbjct: 258 LLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS-AKQDSIVGLT 316
Query: 252 ALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHML 311
+++ F+K ++ + +L ++ G LHG+ +
Sbjct: 317 SIVSCYAEKGDMDIAVVY--FSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAI 374
Query: 312 KSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVV 371
KSG V N L+ MY+K + +F++L + ++S NS++ G Q G A
Sbjct: 375 KSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFE 434
Query: 372 LFKQ-MLRDGIEPNDITFLSLLTACSHAGLLDEGERY--FQLMRQFGVEPKVSHYAKIVD 428
+F Q ML G+ P+ IT SLL CS L+ G+ + L F E V ++D
Sbjct: 435 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVC--TALID 492
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ + G +A S + + P A W +++
Sbjct: 493 MYAKCGNEVQAESVFKS-IKAPCTATWNSMI 522
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
++ S+L +Y + G + A+ +FDEMP +DTV W ++I GY++N DA LF ML+
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-- 144
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
G P+ TL +L+ CG GR VHG K G + V ++L+ Y++C LG
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
A+ +F E+ + K+ VSWN +I +F M + ++ T LL +
Sbjct: 205 AEVLFREM-KDKSTVSWNTMI--GAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
S + LH ++K G V +L+ Y++ G + A +++ + +V
Sbjct: 262 HVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL 315
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
S++ YA+ G AVV F + + ++ + + + +L C + +D G
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIG 366
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 19/304 (6%)
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
+D + S++ E + + +F D+LR S PN FT+S ++ S+ +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLR--SSLTPNHFTMSIFLQ--ATTTSFNSFK 66
Query: 201 ----QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
QV K G V+V +SL+++Y + G + AQ +FDE+ ++ V WNALI
Sbjct: 67 LQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPE-RDTVVWNALICG 125
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
LF M ++G+ + T LL G + QG+ +HG KSG +
Sbjct: 126 YSRNGYECDAWK--LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
L V N L+ Y+K + A +F + VS N+M+ Y+Q G +EA+ +FK M
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 377 LRDGIEPNDITFLSLLTA-CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL 435
+E + +T ++LL+A SH E L+ + G+ +S +V R G
Sbjct: 244 FEKNVEISPVTIINLLSAHVSH-------EPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 436 LDRA 439
L A
Sbjct: 297 LVSA 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 271 LFAKMQREGYGVTEFTYSALL-CSASSVGSLE-QGKWLHGHMLKSGRKLVGYVGNTLLHM 328
+F + R FT S L + +S S + Q + + H+ KSG YV +LL++
Sbjct: 35 IFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNL 94
Query: 329 YAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
Y K G ++ A+ +FD + + D V N+++ GY+++G+ +A LF ML+ G P+ T
Sbjct: 95 YLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTL 154
Query: 389 LSLLTACSHAGLLDEGERYFQLMRQFGVE-------PKVSHYAKIVDLLGRAGLLDRAMS 441
++LL C G + +G + + G+E +S Y+K + LG A +L R M
Sbjct: 155 VNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE-LGSAEVLFREMK 213
Query: 442 FIEGMLIEPTAAIWGALLGA 461
+ + W ++GA
Sbjct: 214 -------DKSTVSWNTMIGA 226
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 55 RSKTGLHVL-DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
R+ T V ++ G + PD LL C++L L G+ +H + L N ++
Sbjct: 428 RASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN--FENENF 485
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ +++ MYA+CG+ A VF + T TW SMI+GY+ + AL + +M
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMRE-- 543
Query: 174 SGSRPNEFTLSSLVKCC 190
G +P+E T ++ C
Sbjct: 544 KGLKPDEITFLGVLSAC 560
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 254/521 (48%), Gaps = 51/521 (9%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
+R + + V + + D Y ++K C L GR+VH ++ R +L
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS--IEVSSHRCNLY 220
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ N+++ MY R G ++ AR++FD M +D V+W ++I Y E+ +A L M G
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 174 S----------------------------GSRPNEFTLSSL-----VKCCGLIPSYGDGR 200
G R + S+ +K C I + G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 201 QVH-----GCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS-WNALI 254
H C + H DNV +SL+ MY+RC L A VF ++ N +S WN++I
Sbjct: 341 VFHCLVIRSCSFSHDI-DNV--RNSLITMYSRCSDLRHAFIVFQQVE--ANSLSTWNSII 395
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK-S 313
L +M G+ T +++L + VG+L+ GK H ++L+
Sbjct: 396 SGFAYNERSEETSF--LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
K + N+L+ MYAKSG I A++VFD + K D V+ S++ GY + G G+ A+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGR 432
K M R GI+P+ +T +++L+ACSH+ L+ EG F M FG+ ++ HY+ +VDL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK-VFELDPFYSGAHVL 491
AG LD+A + EP++A+ LL A +H +G +AA K + E P + G ++L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 492 LANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
LA++YA G W + ++ ++ D G++K + +E ++ +
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 205/466 (43%), Gaps = 53/466 (11%)
Query: 23 RRLWQTAISDDNDNVPEL--DKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQR 80
R + +T+ + D+++VP++ + + I L +T L+ + + LY
Sbjct: 31 RPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRT----FSLLRYQSGSHEFVLYSS 86
Query: 81 --LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
LL TC + G+ +H+H + + + D V+ ++ Y+ L+ A+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCI--SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
+ W +I Y +N+R +++ ++ M+ G R +EFT S++K C + +
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMM--SKGIRADEFTYPSVIKACAALLDFAY 202
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
GR VHG N++V ++L+ MY R G + A+ +FD + ++ VSWNA+I
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE-RDAVSWNAII--NC 259
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYS--------------ALLC------------ 292
L +M G + T++ AL C
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 293 ---------SASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKV 341
+ S +G+L+ GK H +++S + V N+L+ MY++ + A V
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F ++ + + NS++ G+A + +E L K+ML G PN IT S+L + G L
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 402 DEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
G+ + ++R+ + + + +VD+ ++G + A + M
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/521 (29%), Positives = 254/521 (48%), Gaps = 51/521 (9%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
+R + + V + + D Y ++K C L GR+VH ++ R +L
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS--IEVSSHRCNLY 220
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ N+++ MY R G ++ AR++FD M +D V+W ++I Y E+ +A L M G
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 174 S----------------------------GSRPNEFTLSSL-----VKCCGLIPSYGDGR 200
G R + S+ +K C I + G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 201 QVH-----GCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS-WNALI 254
H C + H DNV +SL+ MY+RC L A VF ++ N +S WN++I
Sbjct: 341 VFHCLVIRSCSFSHDI-DNV--RNSLITMYSRCSDLRHAFIVFQQVE--ANSLSTWNSII 395
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK-S 313
L +M G+ T +++L + VG+L+ GK H ++L+
Sbjct: 396 SGFAYNERSEETSF--LLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLF 373
K + N+L+ MYAKSG I A++VFD + K D V+ S++ GY + G G+ A+ F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 374 KQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGR 432
K M R GI+P+ +T +++L+ACSH+ L+ EG F M FG+ ++ HY+ +VDL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 433 AGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK-VFELDPFYSGAHVL 491
AG LD+A + EP++A+ LL A +H +G +AA K + E P + G ++L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 492 LANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSV 532
LA++YA G W + ++ ++ D G++K + +E ++ +
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/466 (22%), Positives = 205/466 (43%), Gaps = 53/466 (11%)
Query: 23 RRLWQTAISDDNDNVPEL--DKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQR 80
R + +T+ + D+++VP++ + + I L +T L+ + + LY
Sbjct: 31 RPISETSKTHDDESVPQVLFNSFRHCISHGQLYEAFRT----FSLLRYQSGSHEFVLYSS 86
Query: 81 --LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM 138
LL TC + G+ +H+H + + + D V+ ++ Y+ L+ A+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCI--SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
+ W +I Y +N+R +++ ++ M+ G R +EFT S++K C + +
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMM--SKGIRADEFTYPSVIKACAALLDFAY 202
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXX 258
GR VHG N++V ++L+ MY R G + A+ +FD + ++ VSWNA+I
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE-RDAVSWNAII--NC 259
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYS--------------ALLC------------ 292
L +M G + T++ AL C
Sbjct: 260 YTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG 319
Query: 293 ---------SASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKV 341
+ S +G+L+ GK H +++S + V N+L+ MY++ + A V
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV 379
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F ++ + + NS++ G+A + +E L K+ML G PN IT S+L + G L
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNL 439
Query: 402 DEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
G+ + ++R+ + + + +VD+ ++G + A + M
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 235/466 (50%), Gaps = 48/466 (10%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERA 159
H L ++ + S++ MY+RCG+ A ++F+++P+K VT+ + I+G +N
Sbjct: 152 HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN--- 208
Query: 160 VDALVLFP---DMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVF 216
+ L P +++R S PN+ T + + C + + GRQ+HG K F
Sbjct: 209 -GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 217 VGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQ 276
VG++L+DMY++C A VF EL +N +SWN++I LF K+
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI--SGMMINGQHETAVELFEKLD 325
Query: 277 REGYGVTEFTYSALLCSASSVG-----------------------------------SLE 301
EG T+++L+ S +G +L+
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL--VKVDVVSCNSMLIG 359
GK +HGH++K+ + +V +L+ MY K G S AR++FDR D V N M+ G
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEP 418
Y +HG + A+ +F+ + + +EP+ TF ++L+ACSH G +++G + F+LM+ ++G +P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV 478
H ++DLLGR+G L A I+ M ++ +LLG+ H +G AA K+
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL 564
Query: 479 FELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
EL+P V+L++IYA+ RW++ +IR+++ L K P S
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 246/531 (46%), Gaps = 43/531 (8%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
TG LD+I + P++ + LLK+C KLG + +GR++H+ + V D+ +
Sbjct: 16 TGGTSLDVILSHS--PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFV--DVFTATA 71
Query: 118 VLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
++ MY + + A +V DEMP + + + ++G +N DA +F D GSG
Sbjct: 72 LVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGM- 130
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
N T++S++ CG I G Q+H K GF V+VG+SLV MY+RCG A +
Sbjct: 131 -NSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARM 186
Query: 238 FDELGRWKNEVSWNALIX-XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASS 296
F+++ K+ V++NA I L K E F + C +S
Sbjct: 187 FEKVPH-KSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC--AS 243
Query: 297 VGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV-DVVSCNS 355
+ +L+ G+ LHG ++K + VG L+ MY+K A VF L +++S NS
Sbjct: 244 LLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNS 303
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
++ G +G + AV LF+++ +G++P+ T+ SL++ S G + E ++F+ M
Sbjct: 304 VISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV 363
Query: 416 VEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAA----IWGALLGASWMHKKIEMG 471
+ P + ++ L I G +I+ A + +L+ M+ K +
Sbjct: 364 MVPSLKCLTSLLSACSDIWTLKNGKE-IHGHVIKAAAERDIFVLTSLID---MYMKCGLS 419
Query: 472 AYAAQKVFEL------DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
++ A+++F+ DP + +V+++ Y G + A I +++++
Sbjct: 420 SW-ARRIFDRFEPKPKDPVF--WNVMISG-YGKHGECESAIEIFELLREE---------- 465
Query: 526 VEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVD 576
++E S+ F + A + K + +E GY P T H+ +D
Sbjct: 466 -KVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMID 515
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 224/438 (51%), Gaps = 40/438 (9%)
Query: 125 CGDL---EHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
CG L ++A +VF + N + + + +MI Y+ +++L F M G +E+
Sbjct: 46 CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM--KSRGIWADEY 103
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
T + L+K C + G+ VHG + GF + +V++Y G +G+AQ VFDE+
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 242 GR-----W-------------------------KNEVSWNALIXXXXXXXXXXXXXXXXL 271
W ++ VSWN++I L
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE--L 221
Query: 272 FAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR-KLVGYVGNTLLHMYA 330
F +M +G+ E T +L ++S+G L+ GKW+H SG K VGN L+ Y
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFL 389
KSG + A +F ++ + +VVS N+++ G A +G G+ + LF M+ +G + PN+ TFL
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 390 SLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
+L CS+ G ++ GE F LM +F +E + HY +VDL+ R+G + A F++ M +
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 449 EPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANI 508
AA+WG+LL A H +++ AA ++ +++P SG +VLL+N+YA GRW++ +
Sbjct: 402 NANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKV 461
Query: 509 RKMMKDSGLKKEPACSWV 526
R +MK + L+K S +
Sbjct: 462 RTLMKKNRLRKSTGQSTI 479
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 165/375 (44%), Gaps = 43/375 (11%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQN------------------------PDVR 109
D Y LLK+C+ L LR G+ VH + V
Sbjct: 101 DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVF 160
Query: 110 DDL-----VIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALV 164
D++ V+ N ++ + GD+E +F +M + V+W SMI+ ++ R +AL
Sbjct: 161 DEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALE 220
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHG-FCDNVFVGSSLVD 223
LF +M+ G P+E T+ +++ + G+ +H G F D + VG++LVD
Sbjct: 221 LFCEMI--DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 224 MYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG-YGV 282
Y + G L A A+F ++ R +N VSWN LI LF M EG
Sbjct: 279 FYCKSGDLEAATAIFRKMQR-RNVVSWNTLI--SGSAVNGKGEFGIDLFDAMIEEGKVAP 335
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN--TLLHMYAKSGSISDARK 340
E T+ +L S G +E+G+ L G M++ KL + ++ + ++SG I++A K
Sbjct: 336 NEATFLGVLACCSYTGQVERGEELFGLMMER-FKLEARTEHYGAMVDLMSRSGRITEAFK 394
Query: 341 VFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP-NDITFLSLLTACSHA 398
+ V + S+L HG K A V ++++ IEP N ++ L +
Sbjct: 395 FLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK--IEPGNSGNYVLLSNLYAEE 452
Query: 399 GLLDEGERYFQLMRQ 413
G + E+ LM++
Sbjct: 453 GRWQDVEKVRTLMKK 467
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
++ID+G +PD A +L LG L G+ +HS + +D + + N+++ Y
Sbjct: 224 EMIDQG-FDPDEATVVTVLPISASLGVLDTGKWIHST-AESSGLFKDFITVGNALVDFYC 281
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+ GDLE A +F +M ++ V+W ++I+G A N + + LF M+ G + PNE T
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA-PNEATF 340
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFDELG 242
++ CC G ++ G + + ++VD+ +R G + EA +
Sbjct: 341 LGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMP 400
Query: 243 RWKNEVSWNALI 254
N W +L+
Sbjct: 401 VNANAAMWGSLL 412
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 219/430 (50%), Gaps = 10/430 (2%)
Query: 102 LLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMP-NKDTVTWTSMITGYAQNERAV 160
+L + D D L+ SV + GDL A + M +D +W S+I+G A + +
Sbjct: 503 ILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 562
Query: 161 DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSS 220
++L F M R G R + TL + G + GR HG K + + ++
Sbjct: 563 ESLRAFQAMSREGK-IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
L+ MY RC + A VF + N SWN +I LF ++ E
Sbjct: 622 LITMYGRCKDIESAVKVFGLISD-PNLCSWNCVISALSQNKAGREVFQ--LFRNLKLEP- 677
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
E T+ LL +++ +GS G H H+++ G + +V L+ MY+ G + K
Sbjct: 678 --NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMK 735
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAG 399
VF + + NS++ + HG G++A+ LFK++ + +EPN +F+SLL+ACSH+G
Sbjct: 736 VFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 400 LLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
+DEG Y+ Q+ +FGV+P H IVD+LGRAG L A FI G+ A +WGAL
Sbjct: 796 FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Query: 459 LGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
L A H ++G A+ +FE++P + ++ LAN Y G W+EA +RKM++D+ LK
Sbjct: 856 LSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALK 915
Query: 519 KEPACSWVEI 528
K P S +++
Sbjct: 916 KLPGYSVIDV 925
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 194/426 (45%), Gaps = 36/426 (8%)
Query: 60 LHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVL 119
L+ + +D+ ++PD A + C L REGR VH + + R VI NSV+
Sbjct: 380 LNQMQSVDK--IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI-NSVI 436
Query: 120 FMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
MY +CG A +F ++D V+W SMI+ ++QN A LF +++ S S+ +
Sbjct: 437 DMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFS 496
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD 239
T+ +++ C S G+ VH CW D L + R +
Sbjct: 497 LSTVLAILTSCDSSDSLIFGKSVH--CWLQKLGD-------LTSAFLR----------LE 537
Query: 240 ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF-TYSALLCSASSVG 298
+ ++ SWN++I F M REG + T + ++ ++G
Sbjct: 538 TMSETRDLTSWNSVISGCASSGHHLESLRA--FQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 299 SLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLI 358
+ QG+ HG +KS R+L + NTL+ MY + I A KVF + ++ S N ++
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERYFQLMRQ-FGV 416
+Q+ G+E LF+ + +EPN+ITF+ LL+A + G G + + L+R+ F
Sbjct: 656 ALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
P VS A +VD+ G+L+ M + +A W +++ A H MG A +
Sbjct: 713 NPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISAHGFHG---MGEKAME 766
Query: 477 KVFELD 482
EL
Sbjct: 767 LFKELS 772
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 163/336 (48%), Gaps = 15/336 (4%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
DL + +L Y R G+L + +FDE+ KD + W SMIT QN R + A+ LF +M+
Sbjct: 121 DLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMI 180
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ---VHGCCWKHGFCDNVFVGSSLVDMYAR 227
G NEF ++L+ + S R+ +H + G + + ++L+++YA+
Sbjct: 181 HKG-----NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK 235
Query: 228 CGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
L A+ VF + ++ VSWN ++ F M G T+
Sbjct: 236 GENLSSAECVFTHM-EHRDIVSWNTIM--TKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGY--VGNTLLHMYAKSGSISDARKVFDRL 345
S ++ + SS+ L G+ LHG ++KSG + VGN+++ MY+K G A VF+ L
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR-DGIEPNDITFLSLLTACSHAGLLDEG 404
V DV+S N++L G+A +G +EA + QM D I+P+ T +S+ + C EG
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 405 ERYFQLMRQFGVEPKVSHYAK-IVDLLGRAGLLDRA 439
+ ++ + ++D+ G+ GL +A
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 190/415 (45%), Gaps = 36/415 (8%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
E D + ++ C+ + +L G +H + + + NS++ MY++CGD E A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
VF+E+ +D ++ +++ G+A N +A + M + +P+ T+ S+ CG
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM-QSVDKIQPDIATVVSITSICG 404
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVF-VGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSW 250
+ +GR VHG + V +S++DMY +CG +A+ +F ++ VSW
Sbjct: 405 DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTH-RDLVSW 463
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS---ALLCSASSVGSLEQGKWLH 307
N++I LF ++ E Y ++F+ S A+L S S SL GK +H
Sbjct: 464 NSMI--SAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVH 520
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
+ K G L + + ++S+ R D+ S NS++ G A G
Sbjct: 521 CWLQKLG---------DLTSAFLRLETMSETR---------DLTSWNSVISGCASSGHHL 562
Query: 368 EAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
E++ F+ M R+G I + IT L ++A + GL+ +G + L + E +
Sbjct: 563 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 622
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL 481
+ + GR ++ A+ + G++ +P W ++ A +K A ++VF+L
Sbjct: 623 ITMYGRCKDIESAVK-VFGLISDPNLCSWNCVISALSQNK-------AGREVFQL 669
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 41/337 (12%)
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERA 159
H L + D + N+++ +YA+ +L A VF M ++D V+W +++T N
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHP 270
Query: 160 VDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD--NVFV 217
+L F M GSG + T S ++ C I G +HG K G+ +V V
Sbjct: 271 RKSLQYFKSMT--GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSV 328
Query: 218 GSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK--M 275
G+S++ MY++CG A+ VF+EL ++ +S NA++ FA M
Sbjct: 329 GNSIISMYSKCGDTEAAETVFEEL-VCRDVISSNAILNG---------------FAANGM 372
Query: 276 QREGYGVTEFTYS--------ALLCSASSV-GSLE---QGKWLHGHMLK---SGRKLVGY 320
E +G+ S A + S +S+ G L +G+ +HG+ ++ R L
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRAL--E 430
Query: 321 VGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD- 379
V N+++ MY K G + A +F D+VS NSM+ ++Q+GF +A LFK+++ +
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 380 -GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
+ + T L++LT+C + L G+ +++ G
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 9/252 (3%)
Query: 200 RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
R VH K G ++ S L+ Y R G L + +FDEL + K+ + WN++I
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDEL-KEKDVIVWNSMITALNQ 165
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
LF +M +G T + SS+ + LH +++G LVG
Sbjct: 166 NGRYIAAVG--LFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG--LVG 221
Query: 320 --YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
+ N L+++YAK ++S A VF + D+VS N+++ +G ++++ FK M
Sbjct: 222 DSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMT 281
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPK--VSHYAKIVDLLGRAGL 435
G E + +TF +++ACS L GE L+ + G P+ VS I+ + + G
Sbjct: 282 GSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGD 341
Query: 436 LDRAMSFIEGML 447
+ A + E ++
Sbjct: 342 TEAAETVFEELV 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 90/230 (39%), Gaps = 27/230 (11%)
Query: 42 KSYYIIDDRNL---------LRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
K + +I D NL L ++K G V L +EP+ + LL T+LG
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTS 696
Query: 93 EGRLVHSHFLLQ----NPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTS 148
G H H + + NP V LV MY+ CG LE +VF W S
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVD------MYSSCGMLETGMKVFRNSGVNSISAWNS 750
Query: 149 MITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG----RQVHG 204
+I+ + + A+ LF + L S PN+ + SL+ C +G +Q+
Sbjct: 751 VISAHGFHGMGEKAMELFKE-LSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEE 809
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
K G +VDM R G L EA +G + W AL+
Sbjct: 810 ---KFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALL 856
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 195/357 (54%), Gaps = 12/357 (3%)
Query: 300 LEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG 359
L++ K +HG + S L + LL MY+ G ++A VF+++ + ++ + ++
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRC 329
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEP 418
+A++GFG++A+ +F + +G P+ F + AC G +DEG +F+ M R +G+ P
Sbjct: 330 FAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAP 389
Query: 419 KVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKV 478
+ Y +V++ G LD A+ F+E M +EP +W L+ S +H +E+G Y A+ V
Sbjct: 390 SIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVV 449
Query: 479 FELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSN 538
LDP I A ++ + + K SG+ +++S+ F +
Sbjct: 450 EFLDPTRLNKQSREGFIPVKASDVEKES----LKKRSGILHG-------VKSSMQEFRAG 498
Query: 539 DIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALL 598
D P+ D++ ++ L + E+GYV +TR L +DQ KE L HSE++A A A+L
Sbjct: 499 DTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVL 558
Query: 599 NTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
N++P ++KN+RVC DCH+A+K ++ IV RE+I RD RFH +G C+C DYW
Sbjct: 559 NSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 5/201 (2%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
+ K L+ +D++ D + RL K C + L+E + VH + DL
Sbjct: 234 KVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL--DLSS 291
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ +L MY+ CG A VF++M K+ TW +I +A+N DA+ +F
Sbjct: 292 NHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE--E 349
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDG-RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
G+ P+ + CG++ +G +G ++ SLV+MYA GFL E
Sbjct: 350 GNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDE 409
Query: 234 AQAVFDELGRWKNEVSWNALI 254
A + + N W L+
Sbjct: 410 ALEFVERMPMEPNVDVWETLM 430
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 223/439 (50%), Gaps = 41/439 (9%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
+LV N +L Y++ G +E A ++FD++ KD V+W +MI G + + +ALV + +ML
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA---- 226
R G +P+E + L+ G Q+HG K GF F+ ++++ YA
Sbjct: 298 R--CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 227 ---------------------------RCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
+ G + +A+ VFD+ K+ SWNA+I
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD-KDIFSWNAMISGYAQ 414
Query: 260 XXXXXXXXXXXLFAKM-QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
LF +M T ++ + SS+GSLE+GK H ++ S
Sbjct: 415 SLSPQLALH--LFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPN 472
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRLVKVD---VVSCNSMLIGYAQHGFGKEAVVLFKQ 375
+ ++ MYAK GSI A +F + + + N+++ G A HG K A+ L+
Sbjct: 473 DNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD 532
Query: 376 MLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDLLGRAG 434
+ I+PN ITF+ +L+AC HAGL++ G+ YF+ M+ G+EP + HY +VDLLG+AG
Sbjct: 533 LQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAG 592
Query: 435 LLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLAN 494
L+ A I+ M ++ IWG LL AS H +E+ AA ++ +DP + G V+L+N
Sbjct: 593 RLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSN 652
Query: 495 IYASAGRWKEAANIRKMMK 513
+YA AGRW++ A +R+ M+
Sbjct: 653 VYADAGRWEDVALVREEMR 671
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 216/509 (42%), Gaps = 104/509 (20%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL--- 128
+ +RAL L +C + GR +H L D + I NSVL MYA+C L
Sbjct: 39 DTERALVSAL-GSCASSNDVTCGRQIHCRVLKSGLD--SNGYICNSVLNMYAKCRLLADA 95
Query: 129 -----EHAR-----------------------QVFDEMPNKDTVTWTSMITGYAQNERAV 160
+HA+ ++FD MP + V++T++I GYAQN +
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 161 DALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSS 220
+A+ LF +M G NE TL++++ C + D R + K VFV ++
Sbjct: 156 EAMELFREM--RNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXX------------- 267
L+ MY C L +A+ +FDE+ +N V+WN ++
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPE-RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVS 272
Query: 268 ----------------XXXLFAKMQREGYGVTEFTYSALL-CSASSVGSLEQGKWLHGHM 310
+ +M R G +E LL SA SVGS +G LHG +
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS-SKGLQLHGTI 331
Query: 311 LKSGRKLVGYVGNTLLHMYA-------------------------------KSGSISDAR 339
+K G ++ T++H YA K+G + AR
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 340 KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHA 398
+VFD+ D+ S N+M+ GYAQ + A+ LF++M+ ++P+ IT +S+ +A S
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL 451
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM--LIEPTAAIWG 456
G L+EG+R + + P + A I+D+ + G ++ A++ + T + W
Sbjct: 452 GSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWN 511
Query: 457 ALL--GASWMHKKIEMGAYAAQKVFELDP 483
A++ A+ H K+ + Y+ + + P
Sbjct: 512 AIICGSATHGHAKLALDLYSDLQSLPIKP 540
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 11/263 (4%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFP 167
V+D + +N+++ + + G +E AR+VFD+ +KD +W +MI+GYAQ+ AL LF
Sbjct: 367 VKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFR 426
Query: 168 DMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR 227
+M+ S +P+ T+ S+ + S +G++ H N + ++++DMYA+
Sbjct: 427 EMI-SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 228 CGFLGEAQAVFDELGRWKNEV--SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
CG + A +F + + WNA+I L++ +Q
Sbjct: 486 CGSIETALNIFHQTKNISSSTISPWNAII--CGSATHGHAKLALDLYSDLQSLPIKPNSI 543
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKL---VGYVGNTLLHMYAKSGSISDARKVF 342
T+ +L + G +E GK M KS + + + G ++ + K+G + +A+++
Sbjct: 544 TFVGVLSACCHAGLVELGKTYFESM-KSDHGIEPDIKHYG-CMVDLLGKAGRLEEAKEMI 601
Query: 343 DRL-VKVDVVSCNSMLIGYAQHG 364
++ VK DV+ +L HG
Sbjct: 602 KKMPVKADVMIWGMLLSASRTHG 624
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 19/208 (9%)
Query: 57 KTGLHVL-DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ 115
+ LH+ ++I V+PD + + LG L EG+ H + D+L
Sbjct: 419 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA- 477
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVT---WTSMITGYAQNERAVDALVLFPDMLRG 172
+++ MYA+CG +E A +F + N + T W ++I G A + A AL L+ D+
Sbjct: 478 -AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL--Q 534
Query: 173 GSGSRPNEFTLSSLVKCC---GLI---PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
+PN T ++ C GL+ +Y + + HG ++ +VD+
Sbjct: 535 SLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKS-----DHGIEPDIKHYGCMVDLLG 589
Query: 227 RCGFLGEAQAVFDELGRWKNEVSWNALI 254
+ G L EA+ + ++ + + W L+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLL 617
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 236/462 (51%), Gaps = 20/462 (4%)
Query: 66 IDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARC 125
I R + + + +L C+ L GR VH+ + Q + + + +++ MY++
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAET--GTISKTALIDMYSKY 132
Query: 126 GDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
G L + +VF+ + KD V+W ++++G+ +N + +AL +F M R +EFTLSS
Sbjct: 133 GHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYR--ERVEISEFTLSS 190
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
+VK C + G+QVH G D V +G++++ Y+ G + EA V++ L
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHT 249
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
+EV N+LI F M R+ V + S CS +S L GK
Sbjct: 250 DEVMLNSLISGCIRNRNYKEA-----FLLMSRQRPNVRVLSSSLAGCSDNS--DLWIGKQ 302
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGF 365
+H L++G + N L+ MY K G I AR +F + VVS SM+ YA +G
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 366 GKEAVVLFKQMLRD--GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSH 422
G +A+ +F++M + G+ PN +TFL +++AC+HAGL+ EG+ F +M++ + + P H
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEH 422
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPT----AAIWGALLGASWMHKKIEMGAYAAQKV 478
Y +D+L +AG + +E M+ AIW A+L A ++ + G Y A+++
Sbjct: 423 YVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRL 482
Query: 479 F-ELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK 519
E P + +VL++N YA+ G+W +R +K+ GL K
Sbjct: 483 MEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVK 524
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 204/432 (47%), Gaps = 32/432 (7%)
Query: 91 LREGRLVHSHFLLQNPDVRD-DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSM 149
LR GR + L N V+ +LV++ + +A HA +FDE+P +D + S
Sbjct: 5 LRIGRFIR----LGNVTVKSTNLVLRCVFIRNFA-----THADHLFDELPQRDLSSLNSQ 55
Query: 150 ITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH 209
++ + ++ D L LF + R + FT ++ C L+ GRQVH K
Sbjct: 56 LSSHLRSGNPNDTLALFLQIHRASPDLSSHTFT--PVLGACSLLSYPETGRQVHALMIKQ 113
Query: 210 GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX 269
G ++L+DMY++ G L ++ VF+ + K+ VSWNAL+
Sbjct: 114 GAETGTISKTALIDMYSKYGHLVDSVRVFESVEE-KDLVSWNALL--SGFLRNGKGKEAL 170
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
+FA M RE ++EFT S+++ + +S+ L+QGK +H ++ +GR LV +G ++ Y
Sbjct: 171 GVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV-VLGTAMISFY 229
Query: 330 AKSGSISDARKVFDRL-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
+ G I++A KV++ L V D V NS++ G ++ KEA +L + PN
Sbjct: 230 SSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVL 284
Query: 389 LSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
S L CS L G++ + + G ++D+ G+ G + +A + +
Sbjct: 285 SSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAI-- 342
Query: 449 EPTAAI--WGALLGASWMH----KKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRW 502
P+ ++ W +++ A ++ K +E+ ++ + P S +++ + A AG
Sbjct: 343 -PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP-NSVTFLVVISACAHAGLV 400
Query: 503 KEAANIRKMMKD 514
KE MMK+
Sbjct: 401 KEGKECFGMMKE 412
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 143/301 (47%), Gaps = 21/301 (6%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
+ K L V + R VE ++KTC L L++G+ VH+ ++ RD +V+
Sbjct: 165 KGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG---RDLVVL 221
Query: 115 QNSVLFMYARCGDLEHARQVFDEMP-NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+++ Y+ G + A +V++ + + D V S+I+G +N +A +L
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM------- 274
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
S RPN LSS + C G+Q+H ++GF + + + L+DMY +CG + +
Sbjct: 275 SRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQ 334
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV--TEFTYSALL 291
A+ +F + K+ VSW ++I +F +M EG GV T+ ++
Sbjct: 335 ARTIFRAIPS-KSVVSWTSMI--DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVI 391
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVG---YVGNTLLHMYAKSGSISDARKVFDRLVKV 348
+ + G +++GK G M + R + G YV + + +K+G + ++ +R+++
Sbjct: 392 SACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV--CFIDILSKAGETEEIWRLVERMMEN 449
Query: 349 D 349
D
Sbjct: 450 D 450
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 239/461 (51%), Gaps = 39/461 (8%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
+ ++ D + LLK L G+++H L+ D I +S++ MY++ G+
Sbjct: 110 KDGLKLDAFIVPSLLKASRNLLDREFGKMIHC--LVLKFSYESDAFIVSSLIDMYSKFGE 167
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ +AR+VF ++ +D V + +MI+GYA N +A +AL L DM G +P+ T ++L+
Sbjct: 168 VGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL--LGIKPDVITWNALI 225
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE 247
+ + ++ G+ +V +S++ ++NE
Sbjct: 226 SGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVH---------------NFQNE 270
Query: 248 VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLH 307
+++A F +M G T LL + +++ ++ GK +H
Sbjct: 271 KAFDA-------------------FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 308 GHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGK 367
G+ + +G + G+V + LL MY K G IS+A +F + K V+ NSM+ YA HG
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 368 EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKI 426
+AV LF QM G + + +TF ++LTACSHAGL D G+ F LM+ ++ + P++ HYA +
Sbjct: 372 KAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431
Query: 427 VDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS 486
VDLLGRAG L A I+ M +EP +WGALL A H +E+ AA+ + EL+P S
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENS 491
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
G +LL ++YA+AG W+ ++KM+K ++ SWVE
Sbjct: 492 GNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 154/347 (44%), Gaps = 38/347 (10%)
Query: 94 GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGY 153
GR++H+H L+ + R + V F Y CG + AR+VFDEMP +D MI
Sbjct: 35 GRVLHAH-LVTSGIARLTRIAAKLVTF-YVECGKVLDARKVFDEMPKRDISGCVVMIGAC 92
Query: 154 AQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD 213
A+N ++L F +M + G + + F + SL+K + G+ +H K +
Sbjct: 93 ARNGYYQESLDFFREMYK--DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES 150
Query: 214 NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFA 273
+ F+ SSL+DMY++ G +G A+ VF +LG ++ V +NA+I L
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGE-QDLVVFNAMI--SGYANNSQADEALNLVK 207
Query: 274 KMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSG 333
M+ G T++AL+ S + + E+ + M L GY
Sbjct: 208 DMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC-----LDGY------------- 249
Query: 334 SISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
K DVVS S++ G + ++A FKQML G+ PN T ++LL
Sbjct: 250 -------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLP 296
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM 440
AC+ + G+ G+E + ++D+ G+ G + AM
Sbjct: 297 ACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM 343
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 183/404 (45%), Gaps = 31/404 (7%)
Query: 178 PNEFTLSSLVKCCGLIPSYGD------GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
P+ F L S+ LI + G GR +H G + + LV Y CG +
Sbjct: 8 PSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKV 67
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+A+ VFDE+ K ++S ++ F +M ++G + F +LL
Sbjct: 68 LDARKVFDEMP--KRDIS-GCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLL 124
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
++ ++ E GK +H +LK + ++ ++L+ MY+K G + +ARKVF L + D+V
Sbjct: 125 KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV 184
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
N+M+ GYA + EA+ L K M GI+P+ IT+ +L++ SH ++ +LM
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGA----SWM 464
G +P V + I+ L ++A + ML + P +A LL A ++M
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
E+ Y+ E F A L ++Y G EA + +K P +
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVRSA---LLDMYGKCGFISEAMIL--------FRKTPKKT 353
Query: 525 WVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDT 568
V + + + ++ +A DK +++++++ +++ ++ T
Sbjct: 354 TVTFNSMIFCYANHGLA----DKAVELFDQMEATGEKLDHLTFT 393
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 254/513 (49%), Gaps = 27/513 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRL--LKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
G+ V + R + P + L L TC +R G +H + + R +LV+ N
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASLVTC-----VRHGEQIHGNAICSGVS-RYNLVVWN 173
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMI---TGYAQNERAVDALVLFPDMLRGG 173
SV+ MY R G ++A VF M ++D V+W +I + E A+D L +M
Sbjct: 174 SVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM---- 229
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
+P+E+T+S +V C + G+Q C K GF N V + +DM+++C L +
Sbjct: 230 -EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+ +F EL +W + V N++I + A Q +FT+S++L S
Sbjct: 289 SVKLFRELEKW-DSVLCNSMIGSYSWHCCGEDALRLFILAMTQ--SVRPDKFTFSSVLSS 345
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC 353
++V L+ G +H ++K G L V +L+ MY K+GS+ A VF + D++
Sbjct: 346 MNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFW 404
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRD-GIEPNDITFLSLLTACSHAGLLDEGERYFQLM- 411
N++++G A++ E++ +F Q+L + ++P+ +T + +L AC +AG ++EG + F M
Sbjct: 405 NTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSME 464
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMG 471
+ GV P HYA I++LL R G+++ A + + EP++ IW +L AS +
Sbjct: 465 KAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLA 524
Query: 472 AYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENS 531
A+ + E +P S +++L IY RW+ + +R M + LK S + IE+S
Sbjct: 525 ETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESS 584
Query: 532 VHVFVSNDIA-HPQKDKIIKM----WEKLNQEI 559
V F ++ + H D + W+ +Q+I
Sbjct: 585 VFSFEADQLQIHGGHDTCALLDLLSWDSFDQKI 617
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 183/396 (46%), Gaps = 21/396 (5%)
Query: 49 DRNLLRRSKTGLHVL--DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQN- 105
+R+LL +S T ++ L++ G V R Y C +L + G ++++ L +
Sbjct: 12 NRSLLSKSPTLAKIVHAQLLEAGFV---RTTYWG--NRCLQL-YFKSGSVINALQLFDDI 65
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
PD + + N L + G L +A +FDEMP +D V+W +MI+G + +
Sbjct: 66 PD--KNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRV 123
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDM 224
F DM R RP EFT S L L+ G Q+HG G N+ V +S++DM
Sbjct: 124 FFDMQRW--EIRPTEFTFSILA---SLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 225 YARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
Y R G A +VF + ++ VSWN LI F M+ E
Sbjct: 179 YRRLGVFDYALSVFLTMED-RDVVSWNCLILSCSDSGNKEVALDQ--FWLMREMEIQPDE 235
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDR 344
+T S ++ S + L +GK +K G V + M++K + D+ K+F
Sbjct: 236 YTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRE 295
Query: 345 LVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
L K D V CNSM+ Y+ H G++A+ LF + + P+ TF S+L++ +A +LD G
Sbjct: 296 LEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSM-NAVMLDHG 354
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM 440
L+ + G + + ++++ + G +D AM
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAM 390
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 228/460 (49%), Gaps = 15/460 (3%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
DR + LK+C++ + G +H L V DL +N+++ Y CG + AR+
Sbjct: 124 DRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL--RNALIHFYCVCGKISDARK 181
Query: 134 VFDEMPNK-DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
VFDEMP D VT+++++ GY Q + AL LF M + S N TL S +
Sbjct: 182 VFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRK--SEVVVNVSTLLSFLSAISD 239
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ H C K G ++ + ++L+ MY + G + A+ +FD R K+ V+WN
Sbjct: 240 LGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIR-KDVVTWNC 298
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I L +M+ E T+ LL S + + G+ + + +
Sbjct: 299 MIDQYAKTGLLEECVW--LLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
L +G L+ MYAK G + A ++F+R+ DV S +M+ GY HG +EAV L
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 373 FKQMLRDG--IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPKVSHYAKIVDL 429
F +M + + PN+ITFL +L ACSH GL+ EG R F+ M + + PKV HY +VDL
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAH 489
LGRAG L+ A I + I + W ALL A ++ ++G ++ E+ +
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA 536
Query: 490 VLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
+LLA +A AG +++ + ++ K +KE S +EIE
Sbjct: 537 ILLAGTHAVAGNPEKSLD-NELNKG---RKEAGYSAIEIE 572
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 12/371 (3%)
Query: 97 VHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN 156
+H + + D +DD + S L ++ D+ +A +F+ + N + + +MI GY+ +
Sbjct: 47 IHGYMVKTGLD-KDDFAV--SKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSIS 103
Query: 157 ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG--LIPSYGDGRQVHGCCWKHGFCDN 214
+ A +F + LR G + F+ + +K C L S G+G +HG + GF
Sbjct: 104 DEPERAFSVF-NQLRA-KGLTLDRFSFITTLKSCSRELCVSIGEG--LHGIALRSGFMVF 159
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
+ ++L+ Y CG + +A+ VFDE+ + + V+++ L+ LF
Sbjct: 160 TDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD--LFRI 217
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
M++ V T + L + S +G L + H +K G L ++ L+ MY K+G
Sbjct: 218 MRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
IS AR++FD ++ DVV+ N M+ YA+ G +E V L +QM + ++PN TF+ LL++
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAI 454
C+++ G L+ + + +VD+ + GLL++A+ M + +
Sbjct: 338 CAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS- 396
Query: 455 WGALLGASWMH 465
W A++ H
Sbjct: 397 WTAMISGYGAH 407
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
++P+ + + LL +C GR V LL+ + D ++ +++ MYA+ G LE
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVAD--LLEEERIALDAILGTALVDMYAKVGLLEK 381
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCC 190
A ++F+ M +KD +WT+MI+GY + A +A+ LF M RPNE T ++ C
Sbjct: 382 AVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 191 GLIPSYGDGRQVHGC-CWK-----HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
S+G G + G C+K + F V +VD+ R G L EA + L
Sbjct: 442 ----SHG-GLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPIT 496
Query: 245 KNEVSWNALI 254
+ +W AL+
Sbjct: 497 SDSTAWRALL 506
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 111/336 (33%), Positives = 181/336 (53%), Gaps = 21/336 (6%)
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
N+++ MY+ GS+ DA VF+ + + ++ + ++ +A++G G++A+ F + ++G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
P+ F + AC G ++EG +F+ M +++G+ P + HY +V +L G LD A+
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 442 FIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGR 501
F+E M EP +W L+ S +H + +G V +LD A R
Sbjct: 340 FVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD----------------ASR 381
Query: 502 W-KEAANIRKMMKDSGLKKEPACSWVEIEN-SVHVFVSNDIAHPQKDKIIKMWEKLNQEI 559
KE+ +K S L KE + N + + DI+ P+ ++ + L + +
Sbjct: 382 LNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEHM 441
Query: 560 KEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCH 619
EIGYVP ++ L VDQ K+ NL H+E+ A L+T S IR+MKN+RVC DCH
Sbjct: 442 IEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCH 501
Query: 620 SAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
+A+K ++ IV RE+I RD RFHH DG CSC +YW
Sbjct: 502 NALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+ + C L+E ++VH F+ + + D+ NS++ MY+ CG +E A VF+ MP
Sbjct: 187 IAQLCGDAQALQEAKVVH-EFITSSVGI-SDISAYNSIIEMYSGCGSVEDALTVFNSMPE 244
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
++ TW +I +A+N + DA+ F + G++P+ + CG++ +G
Sbjct: 245 RNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ--EGNKPDGEMFKEIFFACGVLGDMNEGL 302
Query: 201 QVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEA 234
+K +G + SLV M A G+L EA
Sbjct: 303 LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 229/457 (50%), Gaps = 10/457 (2%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y +++ C+ + EG+ +HS + ++ ++ + N ++ Y+ CGDL + + F+
Sbjct: 216 YCYMIRGCSHDRLVYEGKQLHSLVVKSGWNI-SNIFVANVLVDYYSACGDLSGSMRSFNA 274
Query: 138 MPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYG 197
+P KD ++W S+++ A +D+L LF M G RP+ S + C
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGK--RPSIRPFMSFLNFCSRNSDIQ 332
Query: 198 DGRQVHGCCWKHGF-CDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
G+Q+H K GF ++ V S+L+DMY +C + + ++ L E N+L+
Sbjct: 333 SGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLEC-CNSLMTS 391
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL--CSASSVGSLEQGKWLHGHMLKSG 314
+F M EG G+ E T S +L S S SL +H +KSG
Sbjct: 392 LMHCGITKDIIE--MFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSG 449
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
V +L+ Y KSG +RKVFD L ++ S++ GYA++G G + V + +
Sbjct: 450 YAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLR 509
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF-QLMRQFGVEPKVSHYAKIVDLLGRA 433
+M R + P+++T LS+L+ CSH+GL++EGE F L ++G+ P YA +VDLLGRA
Sbjct: 510 EMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRA 569
Query: 434 GLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLA 493
GL+++A + + W +LL + +H+ +G AA+ + L+P ++ ++
Sbjct: 570 GLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVS 629
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIEN 530
Y G ++ + IR++ L +E S V ++N
Sbjct: 630 KFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 181/381 (47%), Gaps = 12/381 (3%)
Query: 95 RLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYA 154
R+ S FL +NP D + N + + G+L A + FDEM +D VT+ +I+G +
Sbjct: 31 RMDFSSFLEENPS--DLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNS 88
Query: 155 QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDN 214
+ ++ A+ L+ +M+ G R + T S++ C +G QVH GF N
Sbjct: 89 RYGCSLRAIELYAEMV--SCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCN 146
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
+FV S+LV +YA + A +FDE+ +N N L+ ++ +
Sbjct: 147 MFVRSALVGLYACLRLVDVALKLFDEMLD-RNLAVCNLLL--RCFCQTGESKRLFEVYLR 203
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG-YVGNTLLHMYAKSG 333
M+ EG TY ++ S + +GK LH ++KSG + +V N L+ Y+ G
Sbjct: 204 MELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACG 263
Query: 334 SISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
+S + + F+ + + DV+S NS++ A +G +++ LF +M G P+ F+S L
Sbjct: 264 DLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLN 323
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHY-AKIVDLLGRA-GLLDRAMSF--IEGMLIE 449
CS + G++ + + G + H + ++D+ G+ G+ + A+ + + + +E
Sbjct: 324 FCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLE 383
Query: 450 PTAAIWGALLGASWMHKKIEM 470
++ +L+ IEM
Sbjct: 384 CCNSLMTSLMHCGITKDIIEM 404
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 3/226 (1%)
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C L P R + D V+ + +D + G L A FDE+ ++ V+
Sbjct: 21 CSLTPFIATPRMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMS-VRDVVT 79
Query: 250 WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGH 309
+N LI L+A+M G + T+ ++L S +G +H
Sbjct: 80 YNLLISGNSRYGCSLRAIE--LYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCR 137
Query: 310 MLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEA 369
++ G +V + L+ +YA + A K+FD ++ ++ CN +L + Q G K
Sbjct: 138 VISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRL 197
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
++ +M +G+ N +T+ ++ CSH L+ EG++ L+ + G
Sbjct: 198 FEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 213/402 (52%), Gaps = 40/402 (9%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
L+TC+ +L++ +H+ + N + +D ++ ++ + + G+ ++A VF+++ +
Sbjct: 26 FLRTCSNFSQLKQ---IHTKIIKHN--LTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
T TW MI + N + +AL+LF M+ S+ ++FT ++K C S G
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQ-SQFDKFTFPFVIKACLASSSIRLGT 139
Query: 201 QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL-GR----W----------- 244
QVHG K GF ++VF ++L+D+Y +CG + VFD++ GR W
Sbjct: 140 QVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 245 --------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
+N VSW A+I LF +MQ + EFT L
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQ--LFRRMQVDDVKPNEFTIVNL 257
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
L +++ +GSL G+W+H + K+G L ++G L+ MY+K GS+ DARKVFD + +
Sbjct: 258 LQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL 317
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGLLDEGERYFQ 409
+ NSM+ HG G+EA+ LF++M + +EP+ ITF+ +L+AC++ G + +G RYF
Sbjct: 318 ATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 410 LMRQ-FGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
M Q +G+ P H A ++ LL +A +++A + +E M +P
Sbjct: 378 RMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 36/212 (16%)
Query: 74 DRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQ 133
D+ + ++K C +R G VH L +D+ QN+++ +Y +CG + R+
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHG--LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRK 175
Query: 134 VFDEMPN-------------------------------KDTVTWTSMITGYAQNERAVDA 162
VFD+MP ++ V+WT+MIT Y +N R +A
Sbjct: 176 VFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEA 235
Query: 163 LVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
LF M +PNEFT+ +L++ + S GR VH K+GF + F+G++L+
Sbjct: 236 FQLFRRM--QVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALI 293
Query: 223 DMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
DMY++CG L +A+ VFD + + K+ +WN++I
Sbjct: 294 DMYSKCGSLQDARKVFDVM-QGKSLATWNSMI 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
S ++ C ++ +Q+H KH ++ + L+ + + G A VF++L +
Sbjct: 24 SYFLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL-Q 79
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+ +WN +I + + + +FT+ ++ + + S+ G
Sbjct: 80 SPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQ-FDKFTFPFVIKACLASSSIRLG 138
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
+HG +K+G + NTL+ +Y K G RKVFD++ +VS +ML G +
Sbjct: 139 TQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSN 198
Query: 364 GFGKEAVVLFKQM-LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSH 422
A ++F QM +R N +++ +++TA DE FQL R+ V+ +
Sbjct: 199 SQLDSAEIVFNQMPMR-----NVVSWTAMITAYVKNRRPDEA---FQLFRRMQVDDVKPN 250
Query: 423 YAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD 482
IV+LL + L G+L W+H YA + F LD
Sbjct: 251 EFTIVNLLQASTQL-------------------GSLSMGRWVHD------YAHKNGFVLD 285
Query: 483 PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGL 517
F A L ++Y+ G ++A + +M+ L
Sbjct: 286 CFLGTA---LIDMYSKCGSLQDARKVFDVMQGKSL 317
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSH-----FLLQNPDV 108
RR + + V+P+ LL+ T+LG L GR VH + F+L
Sbjct: 230 RRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL----- 284
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
D + +++ MY++CG L+ AR+VFD M K TW SMIT + +AL LF +
Sbjct: 285 --DCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEE 342
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG 199
M S P+ T ++ C + DG
Sbjct: 343 MEEEAS-VEPDAITFVGVLSACANTGNVKDG 372
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 200/415 (48%), Gaps = 36/415 (8%)
Query: 144 VTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL-VKCCGLIPSYGDGRQV 202
++ T ++ YA AL LF M S + P + + SL +K C G V
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQM--HSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 203 HGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXX 262
H K F N FVG +L+DMY +C + A+ +FDE+ + +N V WNA+I
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQ-RNAVVWNAMISHYTHCGK 129
Query: 263 XXXXX-------------------------------XXXLFAKMQREGYGVTEFTYSALL 291
+ KM + T AL+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVV 351
+ S++G+ K +H + ++ + + + L+ Y + GSI + VFD + DVV
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 352 SCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
+ +S++ YA HG + A+ F++M + P+DI FL++L ACSHAGL DE YF+ M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 412 R-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEM 470
+ +G+ HY+ +VD+L R G + A I+ M +PTA WGALLGA + +IE+
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 471 GAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
AA+++ ++P +VLL IY S GR +EA +R MK+SG+K P SW
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 34/216 (15%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
A+ D ++ LK+C + G VH+H + N + + ++L MY +C +
Sbjct: 43 ALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN--FLSNPFVGCALLDMYGKCLSVS 100
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM------------LRGGSGS- 176
HAR++FDE+P ++ V W +MI+ Y + +A+ L+ M ++G G+
Sbjct: 101 HARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTE 160
Query: 177 ------------------RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG 218
+PN TL +LV C I ++ +++H +++ + +
Sbjct: 161 DGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLK 220
Query: 219 SSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
S LV+ Y RCG + Q VFD + ++ V+W++LI
Sbjct: 221 SGLVEAYGRCGSIVYVQLVFDSMED-RDVVAWSSLI 255
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSH----FLLQNPDVRDDLVIQNSVLFMYARCGD 127
+P+ L+ C+ +G R + +HS+ + +P ++ LV Y RCG
Sbjct: 179 KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA------YGRCGS 232
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ + + VFD M ++D V W+S+I+ YA + A AL F +M + P++ +++
Sbjct: 233 IVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMEL--AKVTPDDIAFLNVL 290
Query: 188 KCCGLIPSYGDG----RQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
K C + +++ G +G + S LVD+ +R G EA V +
Sbjct: 291 KACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPE 347
Query: 244 WKNEVSWNALI 254
+W AL+
Sbjct: 348 KPTAKTWGALL 358
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 202/396 (51%), Gaps = 9/396 (2%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
D + G + ++ LL C++ + GR VH + + +L++++S+++ YA
Sbjct: 173 DYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG---NLIVESSLVYFYA 229
Query: 124 RCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
+CG+L A + FD M KD ++WT++I+ ++ + A+ +F ML PNEFT+
Sbjct: 230 QCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML--NHWFLPNEFTV 287
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR 243
S++K C + GRQVH K +VFVG+SL+DMYA+CG + + + VFD +
Sbjct: 288 CSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN 347
Query: 244 WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG 303
+N V+W ++I LF M+R T ++L + SVG+L G
Sbjct: 348 -RNTVTWTSIIAAHAREGFGEEAIS--LFRIMKRRHLIANNLTVVSILRACGSVGALLLG 404
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K LH ++K+ + Y+G+TL+ +Y K G DA V +L DVVS +M+ G +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
G EA+ K+M+++G+EPN T+ S L AC+++ L G + ++ V
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ ++ + + G + A + M E W A++
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSM-PEKNLVSWKAMI 559
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 182/323 (56%), Gaps = 7/323 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P+ +LK C++ LR GR VHS L+ ++ D+ + S++ MYA+CG++ R
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHS--LVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
+VFD M N++TVTWTS+I +A+ +A+ LF M R N T+ S+++ CG
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR--RHLIANNLTVVSILRACGS 397
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ + G+++H K+ NV++GS+LV +Y +CG +A V +L ++ VSW A
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPS-RDVVSWTA 456
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I +M +EG FTYS+ L + ++ SL G+ +H K
Sbjct: 457 MISGCSSLGHESEALD--FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
+ +VG+ L+HMYAK G +S+A +VFD + + ++VS +M++GYA++GF +EA+ L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 373 FKQMLRDGIEPNDITFLSLLTAC 395
+M +G E +D F ++L+ C
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTC 597
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 211/435 (48%), Gaps = 17/435 (3%)
Query: 67 DRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ--NSVLFMYAR 124
D + + +R Y L + +R + +H+ L DD VI N+++ R
Sbjct: 74 DSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMAL----KCFDDQVIYFGNNLISSCVR 129
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
GDL +AR+VFD MP K+TVTWT+MI GY + +A LF D ++ G NE
Sbjct: 130 LGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGI-RFTNERMFV 188
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
L+ C + GRQVHG K G N+ V SSLV YA+CG L A FD +
Sbjct: 189 CLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEE- 246
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
K+ +SW A+I +F M + EFT ++L + S +L G+
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIG--MFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR 304
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
+H ++K K +VG +L+ MYAK G ISD RKVFD + + V+ S++ +A+ G
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYA 424
FG+EA+ LF+ M R + N++T +S+L AC G L G+ + + +E V +
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGS 424
Query: 425 KIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL-GASWMHKKIEMGAYAAQKV---FE 480
+V L + G A + ++ L W A++ G S + + E + + + E
Sbjct: 425 TLVWLYCKCGESRDAFNVLQ-QLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 481 LDPF-YSGAHVLLAN 494
+PF YS A AN
Sbjct: 484 PNPFTYSSALKACAN 498
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 232/472 (49%), Gaps = 13/472 (2%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
T L + I R PD Y L + ++ + R +H ++ D + ++
Sbjct: 89 TVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF--DQICGSA 146
Query: 118 VLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
++ Y++ G + A ++F +P+ D W MI GY + LF M G +
Sbjct: 147 IVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH--RGHQ 204
Query: 178 PNEFTLSSLVKCCGLI-PSYG-DGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
PN +T+ +L GLI PS VH C K + +VG +LV+MY+RC + A
Sbjct: 205 PNCYTMVALTS--GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 236 AVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSAS 295
+VF+ + + V+ ++LI LFA+++ G + +L S +
Sbjct: 263 SVFNSISE-PDLVACSSLITGYSRCGNHKEALH--LFAELRMSGKKPDCVLVAIVLGSCA 319
Query: 296 SVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNS 355
+ GK +H ++++ G +L V + L+ MY+K G + A +F + + ++VS NS
Sbjct: 320 ELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNS 379
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QF 414
+++G HGF A F ++L G+ P++ITF +LL C H+GLL++G+ F+ M+ +F
Sbjct: 380 LILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEF 439
Query: 415 GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYA 474
G+EP+ HY +V L+G AG L+ A F+ + + I GALL +H+ +
Sbjct: 440 GIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVV 499
Query: 475 AQKVFEL-DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSW 525
A+ + + + S V+L+N+YA GRW E +R + +S K P SW
Sbjct: 500 AENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 11/352 (3%)
Query: 97 VHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN 156
+HS F+ ++ RD F YA DL AR++FD P + W S+I YA+
Sbjct: 27 LHS-FVTKSKLARDPYFATQLARF-YALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 157 ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDG--RQVHGCCWKHGFCDN 214
+ L LF +LR S +RP+ FT + L + G S+ R +HG G +
Sbjct: 85 HQFTTVLSLFSQILR--SDTRPDNFTYACLAR--GFSESFDTKGLRCIHGIAIVSGLGFD 140
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
GS++V Y++ G + EA +F + + WN +I LF
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPD-PDLALWNVMI--LGYGCCGFWDKGINLFNL 197
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
MQ G+ +T AL L +H LK YVG L++MY++
Sbjct: 198 MQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMC 257
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
I+ A VF+ + + D+V+C+S++ GY++ G KEA+ LF ++ G +P+ + +L +
Sbjct: 258 IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGS 317
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
C+ G+ + + G+E + + ++D+ + GLL AMS G+
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGI 369
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 5/154 (3%)
Query: 38 PELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLV 97
P+L +I + K LH+ + +PD L +L +C +L G+ V
Sbjct: 271 PDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 98 HSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNE 157
HS+ + ++ D+ + ++++ MY++CG L+ A +F +P K+ V++ S+I G +
Sbjct: 331 HSYVIRLGLEL--DIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHG 388
Query: 158 RAVDALVLFPDMLRGGSGSRPNEFTLSSLV-KCC 190
A A F ++L G P+E T S+L+ CC
Sbjct: 389 FASTAFEKFTEILE--MGLIPDEITFSALLCTCC 420
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 178/334 (53%), Gaps = 17/334 (5%)
Query: 323 NTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
N ++ MY+ S+ DA KVF+ + + + + M+ + +G+G+EA+ LF + +G +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
PN F + + C+ G + EG FQ M R++G+ P + HY + +L +G LD A++
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 442 FIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGR 501
F+E M +EP+ +W L+ S +H +E+G A+ V +LD L + ++
Sbjct: 278 FVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA------TRLDKVSSAGLV 331
Query: 502 WKEAANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKE 561
+A++ K K+ + EP F D +HPQ + I + L ++KE
Sbjct: 332 ATKASDFVK--KEPSTRSEPY--------FYSTFRPVDSSHPQMNIIYETLMSLRSQLKE 381
Query: 562 IGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSA 621
+GYVPDTR+ + E + + + E++A+ +LL + P S I ++ NIR+ GDCH
Sbjct: 382 MGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDM 441
Query: 622 MKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
MK +++I R++I RD +H F +G C C + W
Sbjct: 442 MKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 13/203 (6%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFL-LQNPDVRDDLVIQ 115
+ + VLD ++ D L K C K L R+VH + L +P D+ +
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPC---DVGAR 157
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLRG 172
N+++ MY+ C ++ A +VF+EMP ++ T M+ + N E A+D F +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKE---- 213
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGR-QVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G++PN + + C L +G Q ++G ++ S+ M A G L
Sbjct: 214 -EGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 232 GEAQAVFDELGRWKNEVSWNALI 254
EA + + + W L+
Sbjct: 273 DEALNFVERMPMEPSVDVWETLM 295
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 243/535 (45%), Gaps = 80/535 (14%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
++LI+ G +PD + LL+ G + R +H + + + + NS++ Y
Sbjct: 44 VELINDGE-KPDASPLVHLLRVSGNYGYVSLCRQLHGY--VTKHGFVSNTRLSNSLMRFY 100
Query: 123 ARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFT 182
LE A +VFDEMP+ D ++W S+++GY Q+ R + + LF ++ R S PNEF+
Sbjct: 101 KTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHR--SDVFPNEFS 158
Query: 183 LSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD-NVFVGSSLVDMYARCGFLGEAQAVFD-- 239
++ + C + G +H K G NV VG+ L+DMY +CGF+ +A VF
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 240 ---------------------ELGRW---------------------------------- 244
ELG W
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLS 278
Query: 245 ----KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
N SWN ++ F KM G E++ S +L + +++ +
Sbjct: 279 DMPNPNSSSWNTILTGYVNSEKSGEATE--FFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
G +H K G V + L+ MY+K G + A +F + + +++ N M+ GY
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 361 AQHGFGKEAVVLFKQMLRDG-IEPNDITFLSLLTACSHAGL-LDEGERYFQLM-RQFGVE 417
A++G EA+ LF Q+ ++ ++P+ TFL+LL CSH + ++ YF++M ++ ++
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQK 477
P V H ++ +G+ G + +A I+ W ALLGA K ++ A K
Sbjct: 457 PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAK 516
Query: 478 VFEL-----DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVE 527
+ EL D + +++++N+YA RW+E IRK+M++SG+ KE SW++
Sbjct: 517 MIELGDADKDEYL---YIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 205/419 (48%), Gaps = 43/419 (10%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P++ Y +L + + L GR +H L++N +V+ N+++ YA+CG+LE +R
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHG-MLIKN-GCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
FD + +K+ V W ++++GYA + + L LF ML+ G RP E+T S+ +K C +
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQ--MGFRPTEYTFSTALKSCCV 428
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA------------------ 234
+ +Q+H + G+ DN +V SSL+ YA+ + +A
Sbjct: 429 T----ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNI 484
Query: 235 -QAVFDELGRW------------KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
++ G++ + VSWN I LF M +
Sbjct: 485 VAGIYSRRGQYHESVKLISTLEQPDTVSWN--IAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV-GYVGNTLLHMYAKSGSISDARK 340
++T+ ++L S + L G +HG + K+ +V N L+ MY K GSI K
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMK 602
Query: 341 VFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
VF+ + ++++ +++ HG+G+EA+ FK+ L G +P+ ++F+S+LTAC H G+
Sbjct: 603 VFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGM 662
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALL 459
+ EG FQ M+ +GVEP++ HY VDLL R G L A I M A +W L
Sbjct: 663 VKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 202/447 (45%), Gaps = 51/447 (11%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
++ + NS++ Y +CG+ A ++F + + D V+W ++I A++E + AL LF M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
G PN+ T S++ L+ GRQ+HG K+G + +G++L+D YA+CG
Sbjct: 309 E--HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGN 366
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
L +++ FD + R KN V WNAL+ LF +M + G+ TE+T+S
Sbjct: 367 LEDSRLCFDYI-RDKNIVCWNALLSGYANKDGPICLS---LFLQMLQMGFRPTEYTFSTA 422
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR----------- 339
L + V L+Q LH +++ G + YV ++L+ YAK+ ++DA
Sbjct: 423 L-KSCCVTELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTS 478
Query: 340 ---------------------KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
K+ L + D VS N + ++ + +E + LFK ML+
Sbjct: 479 VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ 538
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI-VDLLGRAGLLD 437
I P+ TF+S+L+ CS L G L+ + + + +D+ G+ G +
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 438 RAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE-LDPFYSGAHVLLANIY 496
M E E W AL+ +H G A +K E L + V +I
Sbjct: 599 SVMKVFEETR-EKNLITWTALISCLGIHG---YGQEALEKFKETLSLGFKPDRVSFISIL 654
Query: 497 AS---AGRWKEAANIRKMMKDSGLKKE 520
+ G KE + + MKD G++ E
Sbjct: 655 TACRHGGMVKEGMGLFQKMKDYGVEPE 681
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 155/323 (47%), Gaps = 9/323 (2%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P+++ LL +C L +R G +H L+ D + +L +Y R LE A
Sbjct: 113 PNQSTVSGLL-SCASL-DVRAGTQLHG-LSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 133 QVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGL 192
QVF++MP K TW M++ + + F +++R G+ + F ++K
Sbjct: 170 QVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFL--GVLKGVSC 227
Query: 193 IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNA 252
+ +Q+H K G + V +SL+ Y +CG A+ +F + G W + VSWNA
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW-DIVSWNA 286
Query: 253 LIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
+I LF M G+ + TY ++L +S V L G+ +HG ++K
Sbjct: 287 IICATAKSENPLKALK--LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 313 SGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL 372
+G + +GN L+ YAK G++ D+R FD + ++V N++L GYA G + L
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSL 403
Query: 373 FKQMLRDGIEPNDITFLSLLTAC 395
F QML+ G P + TF + L +C
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSC 426
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 178/383 (46%), Gaps = 11/383 (2%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
LL C K + +H+ + + + + N+++ +Y + G++ A +VFD+MP
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
++ V++ ++I GY++ A +F +M G PN+ T+S L+ C L G
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY--FGYLPNQSTVSGLLSCASL--DVRAGT 133
Query: 201 QVHGCCWKHG-FCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
Q+HG K+G F + FVG+ L+ +Y R L A+ VF+++ +K+ +WN ++
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDM-PFKSLETWNHMMSLLGH 192
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
F ++ R G +TE ++ +L S V L+ K LH K G
Sbjct: 193 RGFLKECMF--FFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
V N+L+ Y K G+ A ++F D+VS N+++ A+ +A+ LF M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG-LLDR 438
G PN T++S+L S LL G + ++ + G E + ++D + G L D
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 439 AMSFIEGMLIEPTAAIWGALLGA 461
+ F + + W ALL
Sbjct: 371 RLCF--DYIRDKNIVCWNALLSG 391
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR-DDLVIQNSVLFMYARCGDLE 129
+ PD+ + +L C+KL L G +H L+ D D + N ++ MY +CG +
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHG--LITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 130 HARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC 189
+VF+E K+ +TWT++I+ + +AL F + L G +P+ + S++
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETL--SLGFKPDRVSFISILTA 656
Query: 190 CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVS 249
C +G + +G + VD+ AR G+L EA+ + E+ +
Sbjct: 657 CRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPV 716
Query: 250 WNALI 254
W +
Sbjct: 717 WRTFL 721
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 212/438 (48%), Gaps = 35/438 (7%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
V P ++ C++ L G+++H+ + V D V+ SV MY +C LE
Sbjct: 259 VRPLNHTVSSVMLACSRSLALEVGKVIHA--IAVKLSVVADTVVSTSVFDMYVKCDRLES 316
Query: 131 ARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM----------LRGG------- 173
AR+VFD+ +KD +WTS ++GYA + +A LF M + GG
Sbjct: 317 ARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEW 376
Query: 174 ------------SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL 221
+ TL ++ C I G+Q HG ++HG+ NV V ++L
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 222 VDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
+DMY +CG L A F ++ ++EVSWNAL+ F MQ E
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS--FFEGMQVEAKP 494
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
+++T + LL +++ +L GK +HG +++ G K+ + ++ MY+K A +V
Sbjct: 495 -SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 342 FDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
F D++ NS++ G ++G KE LF + +G++P+ +TFL +L AC G +
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHV 613
Query: 402 DEGERYFQLMR-QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLG 460
+ G +YF M ++ + P+V HY +++L + G L + F+ M +P + +
Sbjct: 614 ELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRIND 673
Query: 461 ASWMHKKIEMGAYAAQKV 478
A ++ ++GA+AA+++
Sbjct: 674 ACQRYRWSKLGAWAAKRL 691
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 11/337 (3%)
Query: 77 LYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFD 136
LY+RL ++C+ + + R V SH + +P + + N + Y +CG ++ AR++F+
Sbjct: 63 LYERLFRSCSSKALVVQARKVQSHLVTFSP--LPPIFLLNRAIEAYGKCGCVDDARELFE 120
Query: 137 EMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSY 196
EMP +D +W ++IT AQN + + +F M R G R E + + ++K CGLI
Sbjct: 121 EMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR--DGVRATETSFAGVLKSCGLILDL 178
Query: 197 GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXX 256
RQ+H K+G+ NV + +S+VD+Y +C + +A+ VFDE+ ++VSWN ++
Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVN-PSDVSWNVIV-- 235
Query: 257 XXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK 316
+F KM T S+++ + S +LE GK +H +K
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV 295
Query: 317 LVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQM 376
V ++ MY K + AR+VFD+ D+ S S + GYA G +EA LF M
Sbjct: 296 ADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Query: 377 LRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
E N +++ ++L HA DE + LMRQ
Sbjct: 356 ----PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 21/306 (6%)
Query: 215 VFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAK 274
+F+ + ++ Y +CG + +A+ +F+E+ ++ SWNA+I +F +
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPE-RDGGSWNAVITACAQNGVSDEVFR--MFRR 152
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN-----TLLHMY 329
M R+G TE +++ +L S + L + LH ++K GY GN +++ +Y
Sbjct: 153 MNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK-----YGYSGNVDLETSIVDVY 207
Query: 330 AKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFL 389
K +SDAR+VFD +V VS N ++ Y + GF EAVV+F +ML + P + T
Sbjct: 208 GKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVS 267
Query: 390 SLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE 449
S++ ACS + L+ G+ + + V + D+ + L+ A + +
Sbjct: 268 SVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS--GAHVLLANIYASAGRWKEAAN 507
+ A+ G + E A+++F+L P + + +L Y A W EA +
Sbjct: 328 DLKSWTSAMSGYAMSGLTRE-----ARELFDLMPERNIVSWNAMLGG-YVHAHEWDEALD 381
Query: 508 IRKMMK 513
+M+
Sbjct: 382 FLTLMR 387
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 17/344 (4%)
Query: 199 GRQVHGCCWKHGFC-DNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIX-- 255
GR VHG K GF ++ +G++L+ YA+ G L A+ VFDE+ + V+WNA+I
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPE-RTSVTWNAMIGGY 188
Query: 256 -XXXXXXXXXXXXXXXLFAKMQREGYGV--TEFTYSALLCSASSVGSLEQGKWLHGHMLK 312
LF + G GV T+ T +L + S G LE G +HG++ K
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 313 SG--RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAV 370
G ++ ++G L+ MY+K G +++A VF+ + +V + SM G A +G G E
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMR-QFGVEPKVSHYAKIVDL 429
L +M GI+PN+ITF SLL+A H GL++EG F+ M+ +FGV P + HY IVDL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 430 LGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFEL---DPFYS 486
LG+AG + A FI M I+P A + +L A ++ + MG + + E+ D S
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 487 GA----HVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
G+ +V L+N+ A G+W E +RK MK+ +K P S+V
Sbjct: 429 GSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 164/341 (48%), Gaps = 25/341 (7%)
Query: 91 LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMI 150
LR GR+VH + + + + +I ++L YA+ GDL +AR+VFDEMP + +VTW +MI
Sbjct: 127 LRVGRIVHG-MVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 151 TGYAQ-----NERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
GY N A A+VLF GSG RP + T+ ++ G VHG
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 206 CWKHGFCD--NVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXX 263
K GF +VF+G++LVDMY++CG L A +VF EL + KN +W ++
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF-ELMKVKNVFTWTSM--ATGLALNG 302
Query: 264 XXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM-LKSGRKLVGYVG 322
L +M G E T+++LL + +G +E+G L M + G V
Sbjct: 303 RGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHY 362
Query: 323 NTLLHMYAKSGSISDARK-VFDRLVKVDVV----SCNSMLIGYAQHGFGKEAVVLFKQML 377
++ + K+G I +A + + +K D + CN+ I Y + G+E ++
Sbjct: 363 GCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSI-YGETVMGEEIGKALLEIE 421
Query: 378 RD-----GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
R+ G E D +++L +H G E E+ + M++
Sbjct: 422 REDEKLSGSECED--YVALSNVLAHKGKWVEVEKLRKEMKE 460
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 181/353 (51%), Gaps = 41/353 (11%)
Query: 110 DDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDM 169
+D+V ++ +A+ DLE+AR+ FD MP K V+W +M++GYAQN DAL LF DM
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 170 LRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
LR G RPNE T ++ C R + + N FV ++L+DM+A+C
Sbjct: 256 LR--LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 230 FLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG---------- 279
+ A+ +F+ELG +N V+WNA+I LF M +
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ--LFDTMPKRNVVSWNSLIAG 371
Query: 280 -------------------YGVT---EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL 317
YG + E T ++L + + LE G + ++ K+ KL
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
+L+ MYA+ G++ +A++VFD + + DVVS N++ +A +G G E + L +M
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 491
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
+GIEP+ +T+ S+LTAC+ AGLL EG+R F+ +R P HYA +DLL
Sbjct: 492 DEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLADHYA-CMDLL 539
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 20/269 (7%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
++ LID V + + LL K ++ R + + Q +LV N+++
Sbjct: 286 LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR-----NLVTWNAMISG 340
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
Y R GD+ ARQ+FD MP ++ V+W S+I GYA N +A A+ F DM+ G S+P+E
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD-SKPDEV 399
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL 241
T+ S++ CG + G + K+ N SL+ MYAR G L EA+ VFDE+
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
+ ++ VS+N L L +KM+ EG TY+++L + + G
Sbjct: 460 -KERDVVSYNTLF--TAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAG--- 513
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
+LK G+++ + N L YA
Sbjct: 514 --------LLKEGQRIFKSIRNPLADHYA 534
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 16/194 (8%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L+ + R G F++ ++ SA G L Q + K G YV N ++ MY
Sbjct: 93 LYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQA-----LVEKLGFFKDPYVRNVIMDMYV 147
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLS 390
K S+ ARKVFD++ + N M+ GY + G +EA LF M + + +++
Sbjct: 148 KHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDV----VSWTV 203
Query: 391 LLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML--- 447
++T + L+ +YF M E V + ++ + G + A+ ML
Sbjct: 204 MITGFAKVKDLENARKYFDRM----PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG 259
Query: 448 IEPTAAIWGALLGA 461
+ P W ++ A
Sbjct: 260 VRPNETTWVIVISA 273
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 194/376 (51%), Gaps = 7/376 (1%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYAR 124
+I + P+ + +L + L+ G+ VH+H +L++ + + + + ++ +Y +
Sbjct: 306 MISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH-VLKSKNYVEQPFVHSGLIDLYCK 364
Query: 125 CGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
CGD+ R+VF ++ ++WT++++GYA N R AL M + G RP+ T++
Sbjct: 365 CGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ--EGFRPDVVTIA 422
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
+++ C + + G+++H K+ F NV + +SL+ MY++CG +FD L +
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ- 481
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+N +W A+I +F M + T +L S + +L+ GK
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIE--VFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGK 539
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
LHGH+LK + + +V ++ MY K G + A FD + ++ +++ Y +
Sbjct: 540 ELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNE 599
Query: 365 FGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPKVSHY 423
++A+ F+QM+ G PN TF ++L+ CS AG +DE R+F LM R + ++P HY
Sbjct: 600 LFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHY 659
Query: 424 AKIVDLLGRAGLLDRA 439
+ +++LL R G ++ A
Sbjct: 660 SLVIELLNRCGRVEEA 675
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 191/384 (49%), Gaps = 12/384 (3%)
Query: 81 LLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN 140
+ K+ LR+G + +H L + + + ++ S++ MY +CG + AR+VFDE+
Sbjct: 220 VFKSFAGASALRQG--LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE 277
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGR 200
+D V W +MI G A N+R +AL LF M+ PN L++++ G + + G+
Sbjct: 278 RDIVVWGAMIAGLAHNKRQWEALGLFRTMI-SEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 201 QVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX 259
+VH K + + FV S L+D+Y +CG + + VF + +N +SW AL+
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAA 395
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
++ MQ+EG+ T + +L + + +++QGK +H + LK+
Sbjct: 396 NGRFDQALRSIVW--MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNV 453
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
+ +L+ MY+K G ++FDRL + +V + +M+ Y ++ + + +F+ ML
Sbjct: 454 SLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS 513
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQ--LMRQFGVEPKVSHYAKIVDLLGRAGLLD 437
P+ +T +LT CS L G+ L ++F P VS A+I+ + G+ G L
Sbjct: 514 KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDL- 570
Query: 438 RAMSFIEGMLIEPTAAIWGALLGA 461
R+ +F + + W A++ A
Sbjct: 571 RSANFSFDAVAVKGSLTWTAIIEA 594
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 203/433 (46%), Gaps = 16/433 (3%)
Query: 35 DNVPELDKSYYIID-DRNLLRRS---KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGK 90
++P K+ YII D + R + L +LD +++ + + + LL+ C +
Sbjct: 67 SSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKS 126
Query: 91 LREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMI 150
L G+ VH H + + + ++ ++ MY CG ++ A++VFDE + + +W +++
Sbjct: 127 LLHGKQVHVHIRING--LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALL 184
Query: 151 TG--YAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK 208
G + +R D L F +M G N ++LS++ K + G + H K
Sbjct: 185 RGTVISGKKRYQDVLSTFTEMRELGVDL--NVYSLSNVFKSFAGASALRQGLKTHALAIK 242
Query: 209 HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXX 268
+G ++VF+ +SLVDMY +CG +G A+ VFDE+ ++ V W A+I
Sbjct: 243 NGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE-RDIVVWGAMI--AGLAHNKRQWEA 299
Query: 269 XXLFAKM-QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKL-VGYVGNTLL 326
LF M E + +L V +L+ GK +H H+LKS + +V + L+
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLI 359
Query: 327 HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
+Y K G ++ R+VF + + +S +++ GYA +G +A+ M ++G P+ +
Sbjct: 360 DLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVV 419
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
T ++L C+ + +G+ + P VS ++ + + G+ + + +
Sbjct: 420 TIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD-R 478
Query: 447 LIEPTAAIWGALL 459
L + W A++
Sbjct: 479 LEQRNVKAWTAMI 491
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ G+ V L+ PD R+L C+ L L+ G+ +H H L + + +
Sbjct: 501 RAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKK--EFESIPFVSA 558
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
++ MY +CGDL A FD + K ++TWT++I Y NE DA+ F M+ G
Sbjct: 559 RIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMV--SRGF 616
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEAQ 235
PN FT ++++ C + + + + + S ++++ RCG + EAQ
Sbjct: 617 TPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 275 MQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGS 334
+++ G V T+SALL + SL GK +H H+ +G + ++ L+HMY GS
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVL--FKQMLRDGIEPNDITFLSLL 392
+ DA+KVFD +V S N++L G G + VL F +M G++ N + ++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL---GRAGLLDRAMSFIEGMLIE 449
+ + A L +G + L + G+ V +VD+ G+ GL R I +E
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI----VE 277
Query: 450 PTAAIWGALLGASWMHKK 467
+WGA++ A H K
Sbjct: 278 RDIVVWGAMI-AGLAHNK 294
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 205/422 (48%), Gaps = 44/422 (10%)
Query: 141 KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK--CCGLIPSYGD 198
K + ++I Y +L LF ML S +PN T SL+K C SYG
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHML--ASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---------------GR 243
+HG K GF + FV +S V Y G L ++ +FD++ GR
Sbjct: 107 A--LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 244 ---------------WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM-QREGYGVT--EF 285
+ VSW +I +F +M Q E +T E
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALM--VFGEMIQNERAVITPNEA 222
Query: 286 TYSALLCSASSV--GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
T+ ++L S ++ G + GK +HG+++ L +G LL MY K+G + A +FD
Sbjct: 223 TFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 344 RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
++ V + N+++ A +G K+A+ +F+ M + PN IT L++LTAC+ + L+D
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 404 GERYFQ-LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGAS 462
G + F + ++ + P HY +VDL+GRAGLL A +FI+ + EP A++ GALLGA
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGAC 402
Query: 463 WMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
+H+ E+G +++ L P + G +V L+ A W EA +RK M ++G++K PA
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Query: 523 CS 524
S
Sbjct: 463 YS 464
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 87 KLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTW 146
++G L R + L NP V V NS+L R G++++A + F MP D V+W
Sbjct: 133 EVGDLESSRKMFDDIL--NPCV----VACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSW 186
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGS-RPNEFTLSSLVKCCGLIPSYGD--GRQVH 203
T++I G+++ AL++F +M++ PNE T S++ C G G+Q+H
Sbjct: 187 TTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIH 246
Query: 204 GCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALI 254
G +G++L+DMY + G L A +FD++ R K +WNA+I
Sbjct: 247 GYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI-RDKKVCAWNAII 296
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 56 SKTGLHVLDLI--------DRGAVEPDRALYQRLLKTCTKL--GKLREGRLVHSHFLLQN 105
SK GLH L+ +R + P+ A + +L +C G +R G+ +H + + +
Sbjct: 194 SKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVM--S 251
Query: 106 PDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVL 165
++ + ++L MY + GDLE A +FD++ +K W ++I+ A N R AL +
Sbjct: 252 KEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEM 311
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQV-HGCCWKHGFCDNVFVGSSLVDM 224
F +M++ S PN TL +++ C G Q+ C ++ +VD+
Sbjct: 312 F-EMMK-SSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDL 369
Query: 225 YARCGFLGEAQAVFDEL 241
R G L +A L
Sbjct: 370 IGRAGLLVDAANFIQSL 386
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 192/417 (46%), Gaps = 40/417 (9%)
Query: 152 GYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF 211
Y + AL + D+LR G P+ +T SL+ C G+ HG KHG
Sbjct: 92 AYLVSSSPKQALGFYFDILR--FGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG- 148
Query: 212 CDNVF-VGSSLVDMYARCGFLGEAQAVFDELGR-----W--------------------- 244
CD V V +SL+ MY CG L A+ +F E+ + W
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 245 ----KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
KN +SWN +I LF +M R G+ E T LL + L
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSIS--LFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
++G+ +H ++++ + L+ MY K + AR++FD L + V+ N M++ +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM-RQFGVEPK 419
HG + + LF+ M+ + P+++TF+ +L C+ AGL+ +G+ Y+ LM +F ++P
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
H + +L AG + A ++ + + P + W LL +S +G A+
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIENSVH 533
+ E DP + LL NIY+ GRW++ +R+M+K+ + + P C V+++ VH
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 109 RDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPD 168
+ D+V NS++ R GD+ A ++FDEMP+K+ ++W MI+ Y ++ LF +
Sbjct: 181 KRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFRE 240
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M+R +G + NE TL L+ CG +GR VH + +V + ++L+DMY +C
Sbjct: 241 MVR--AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKC 298
Query: 229 GFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
+G A+ +FD L +N+V+WN +I LF M E T+
Sbjct: 299 KEVGLARRIFDSLS-IRNKVTWNVMI--LAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN-TLLHMYAKSGSISDARKVFDRLVK 347
+LC + G + QG+ + M+ + + + ++Y+ +G +A + L
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 348 VDVV 351
DV
Sbjct: 416 EDVT 419
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 68 RGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD 127
R + + + LL C + +L+EGR VH+ + + +VI +++ MY +C +
Sbjct: 243 RAGFQGNESTLVLLLNACGRSARLKEGRSVHASLI--RTFLNSSVVIDTALIDMYGKCKE 300
Query: 128 LEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ AR++FD + ++ VTW MI + + R L LF M+ G RP+E T ++
Sbjct: 301 VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMING--MLRPDEVTFVGVL 358
Query: 188 KCCGLIPSYGDGRQVHGCC---------WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
C G+ + + H +C + ++Y+ GF EA+
Sbjct: 359 CGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWC--------MANLYSSAGFPEEAEEAL 410
Query: 239 DEL 241
L
Sbjct: 411 KNL 413
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 191/372 (51%), Gaps = 26/372 (6%)
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
A LC V +LE+ + +H + L +T++ MY+ S DA VF+ + K
Sbjct: 119 AKLCG--EVEALEEARVVHDCITP----LDARSYHTVIEMYSGCRSTDDALNVFNEMPKR 172
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
+ + +M+ A++G G+ A+ +F + + +G +P+ F ++ AC G ++EG +F
Sbjct: 173 NSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHF 232
Query: 409 QLM-RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKK 467
+ M R +G+ + Y ++++L G LD A+ F+E M +EP+ +W L+ W+
Sbjct: 233 ESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGY 292
Query: 468 IEMGAYAAQKVFELDPFY----SGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPAC 523
+E+G A+ + +LD S A ++ A SA + +M++D K+
Sbjct: 293 LELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKR---- 348
Query: 524 SWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKELN 583
+H F + D +H + + L ++ +IG+VP TR + V++ EKE
Sbjct: 349 --------MHEFRAGDTSHL---GTVSAFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQ 397
Query: 584 LQYHSEKLALAFALLNTSPGSTIRIMKNIRVCGDCHSAMKYVTLIVKREIIVRDTNRFHH 643
L + S KLA A A++N+ + +++N+R C D H+ K ++LI R +I RD ++H
Sbjct: 398 LLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHF 457
Query: 644 FCDGFCSCGDYW 655
+ +G CSC DYW
Sbjct: 458 YKNGVCSCKDYW 469
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ L V+D+++ D L K C ++ L E R+VH + D R +
Sbjct: 94 REALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHD--CITPLDARS----YH 147
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLRGG 173
+V+ MY+ C + A VF+EMP +++ TW +MI A+N ERA+D F +
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIE----- 202
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLG 232
G++P++ ++ C I +G ++ +G ++ ++++M A CG L
Sbjct: 203 EGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD 262
Query: 233 EAQAVFDELGRWKNEVSWNALI 254
EA + + + W L+
Sbjct: 263 EALDFVERMTVEPSVEMWETLM 284
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 173/354 (48%), Gaps = 36/354 (10%)
Query: 208 KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXX-------- 259
K GF +V+V ++LV MY G + +A VFDE+ +N V+WN +I
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPE-RNPVTWNVMITGLTNLGDFEKAL 209
Query: 260 ---------------------XXXXXXXXXXXLFAKMQR-EGYGVTEFTYSALLCSASSV 297
LF++M + E T A+L + ++
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 298 GSLEQGKWLHGHMLKSGRKLVGY-VGNTLLHMYAKSGSISDARKVFDRLV--KVDVVSCN 354
G L+ +H ++ K G V N+L+ YAK G I A K F + + ++VS
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 355 SMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG--ERYFQLMR 412
+M+ +A HG GKEAV +FK M R G++PN +T +S+L ACSH GL +E E + ++
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
++ + P V HY +VD+L R G L+ A + IE A +W LLGA ++ E+
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 473 YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWV 526
+K+ EL+ + G +VL++NI+ GR+ +A RK M G+ K P S V
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 94 GRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGY 153
G ++ +H + R+ V N ++ GD E A ++MPN+ V+WT++I GY
Sbjct: 172 GNMIDAHKVFDEMPERNP-VTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGY 230
Query: 154 AQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGF-- 211
A+ ++ +A++LF M+ +PNE T+ +++ + VH K GF
Sbjct: 231 ARVDKPKEAILLFSRMV-ACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVP 289
Query: 212 CDNVFVGSSLVDMYARCGFLGEAQAVFDEL--GRWKNEVSWNALIXXXXXXXXXXXXXXX 269
CD + V +SL+D YA+CG + A F E+ GR KN VSW +I
Sbjct: 290 CD-IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR-KNLVSWTTMI--SAFAIHGMGKEAV 345
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN--TLLH 327
+F M+R G T ++L + S G E+ + + + K+ V + L+
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVD 405
Query: 328 MYAKSGSISDARKV 341
M + G + +A K+
Sbjct: 406 MLRRKGRLEEAEKI 419
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 29/200 (14%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
A++P+ +L LG L+ VH+ ++ + V D+ + NS++ YA+CG ++
Sbjct: 251 AIKPNEITILAILPAVWNLGDLKMCGSVHA-YVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 130 HARQVFDEMPN--KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
A + F E+PN K+ V+WT+MI+ +A + +A+ +F DM R G +PN T+ S++
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER--LGLKPNRVTMISVL 367
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCD--NVFVGS-----------SLVDMYARCGFLGEA 234
C HG + F + N V LVDM R G L EA
Sbjct: 368 NACS-----------HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEA 416
Query: 235 QAVFDELGRWKNEVSWNALI 254
+ + E+ + V W L+
Sbjct: 417 EKIALEIPIEEKAVVWRMLL 436
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 173/352 (49%), Gaps = 13/352 (3%)
Query: 181 FTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE 240
FTL++L++ LI Q+ + +V + L+D + + A+ +FD
Sbjct: 153 FTLNTLIRVYSLIAPIDSALQL----FDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
+ ++ VSWN+LI LF +M G + L + + G
Sbjct: 209 MP-LRDLVSWNSLISGYAQMNHCREAIK--LFDEMVALGLKPDNVAIVSTLSACAQSGDW 265
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGY 360
++GK +H + + + ++ L+ YAK G I A ++F+ + + N+M+ G
Sbjct: 266 QKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGL 325
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ-FGVEPK 419
A HG G+ V F++M+ GI+P+ +TF+S+L CSH+GL+DE F MR + V +
Sbjct: 326 AMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNRE 385
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGMLIE----PTAAIWGALLGASWMHKKIEMGAYAA 475
+ HY + DLLGRAGL++ A IE M + W LLG +H IE+ AA
Sbjct: 386 MKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAA 445
Query: 476 QKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMM-KDSGLKKEPACSWV 526
+V L P G + ++ +YA+A RW+E +R+++ +D +KK S V
Sbjct: 446 NRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 127/284 (44%), Gaps = 51/284 (17%)
Query: 104 QNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDAL 163
+NP + D+V N ++ + ++ AR++FD MP +D V+W S+I+GYAQ +A+
Sbjct: 177 ENP--QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
LF +M+ G +P+ + S + C + G+ +H + + F+ + LVD
Sbjct: 235 KLFDEMV--ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVD 292
Query: 224 MYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
YA+CGF+ A +F EL K +WNA+I + G G
Sbjct: 293 FYAKCGFIDTAMEIF-ELCSDKTLFTWNAMI------------------TGLAMHGNGEL 333
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
Y M+ SG K G ++L + SG + +AR +FD
Sbjct: 334 TVDY-------------------FRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 344 RLVKVDVVS-------CNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
++ + V+ C + L+G A G +EA + +QM +DG
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRA--GLIEEAAEMIEQMPKDG 416
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ + + D + ++PD L C + G ++G+ +H + + + D +
Sbjct: 231 REAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDY--TKRKRLFIDSFLAT 288
Query: 117 SVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
++ YA+CG ++ A ++F+ +K TW +MITG A + + F M+ SG
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMV--SSGI 346
Query: 177 RPNEFTLSSLVKCC---GLIPS----YGDGRQVHGCC--WKHGFCDNVFVGSSLVDMYAR 227
+P+ T S++ C GL+ + R ++ KH C + D+ R
Sbjct: 347 KPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGC--------MADLLGR 398
Query: 228 CGFLGEAQAVFDEL----GRWKNEVSWNALI 254
G + EA + +++ G + ++W+ L+
Sbjct: 399 AGLIEEAAEMIEQMPKDGGNREKLLAWSGLL 429
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 81/101 (80%)
Query: 555 LNQEIKEIGYVPDTRHVLLFVDQHEKELNLQYHSEKLALAFALLNTSPGSTIRIMKNIRV 614
L +E+++ GYVP+T++VL +D+ KE L +HSE+LA+AF ++NT PG+TIR+MKN+R+
Sbjct: 139 LGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRI 198
Query: 615 CGDCHSAMKYVTLIVKREIIVRDTNRFHHFCDGFCSCGDYW 655
CGDCH+ +K ++ I REIIVRD RFHHF DG CSCGDYW
Sbjct: 199 CGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 149/332 (44%), Gaps = 15/332 (4%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
+L L+D ++ + +Y L K + R + H + +R + N +L M
Sbjct: 75 ILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIM--KSSIRPTITFINRLLLM 132
Query: 122 YARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR---GGSGSRP 178
+ CG L+ RQ+FD MP++D +W + G + DA LF ML+ G+ P
Sbjct: 133 HVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP 192
Query: 179 NEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD--NVFVGSSLVDMYARCGFLGEAQA 236
+ + L ++K C +I + G+QVH C K GF D + ++ SL+ Y L +A
Sbjct: 193 S-WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANL 251
Query: 237 VFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL--CSA 294
V +L N V+W A + F +M G +S +L CS
Sbjct: 252 VLHQLSN-ANTVAWAAKVTNDYREGEFQEVIRD--FIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSC- 353
S G G+ +H + +K G + + L+ MY K G + DA KVF VSC
Sbjct: 309 VSDGG-RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
N+M+ Y Q+G EA+ L QM GI+ +D
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 17/262 (6%)
Query: 221 LVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM----Q 276
L+ M+ CG L + +FD + ++ SW I LF M Q
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPH-RDFHSW--AIVFLGCIEMGDYEDAAFLFVSMLKHSQ 185
Query: 277 REGYGVTEFTYSALLCSASSVGSLEQGKWLHG--HMLKSGRKLVGYVGNTLLHMYAKSGS 334
+ + + + +L + + + E GK +H H L + Y+ +L+ Y +
Sbjct: 186 KGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRC 245
Query: 335 ISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
+ DA V +L + V+ + + + G +E + F +M GI+ N F ++L A
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Query: 395 CSHAGLLDEGERYFQLMR----QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEP 450
CS + +G R Q + + G E +++++ G+ G + A + E
Sbjct: 306 CS---WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDET 362
Query: 451 TAAIWGALLGASWMHKKIEMGA 472
+ + W A++ AS+M I + A
Sbjct: 363 SVSCWNAMV-ASYMQNGIYIEA 383
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 170/394 (43%), Gaps = 17/394 (4%)
Query: 61 HVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLF 120
+ L ++DR +V PD Y +L++ GKL++ V L + D D++ ++
Sbjct: 190 NALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR--DCYPDVITYTILIE 247
Query: 121 MYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGS 176
R + HA ++ DEM ++ D VT+ ++ G + R +A+ DM SG
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM--PSSGC 305
Query: 177 RPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQA 236
+PN T + +++ + D ++ + GF +V + L++ R G LG A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 237 VFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+ +++ G N +S+N L+ +M G TY+ +L +
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE--YLERMVSRGCYPDIVTYNTMLTA 423
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVD 349
G +E + + G V NT++ AK+G A K+ D + +K D
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
++ +S++ G ++ G EA+ F + R GI PN +TF S++ + D +
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
M G +P + Y +++ L G+ A+ +
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 19/273 (6%)
Query: 209 HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXX 265
HG ++ ++L+ + R G +A + + L G + +++N +I
Sbjct: 131 HGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN 190
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGN 323
+ + R TY+ +L S G L+Q + ML+ ++ Y
Sbjct: 191 A-----LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT-- 243
Query: 324 TLLHMYAKSGSISDARKVFD----RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
L+ + + A K+ D R DVV+ N ++ G + G EA+ M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G +PN IT +L + G + E+ M + G P V + +++ L R GLL RA
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 440 MSFIEGML---IEPTAAIWGALLGASWMHKKIE 469
+ +E M +P + + LL KK++
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 15/270 (5%)
Query: 210 GFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXX 269
G +V + ++ Y + G + A +V D + + V++N ++
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 270 XLFAKMQREGYGVTEFTYSALL---CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLL 326
L +QR+ Y TY+ L+ C S VG L M G N L+
Sbjct: 227 -LDRMLQRDCYPDV-ITYTILIEATCRDSGVG---HAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 327 HMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIE 382
+ K G + +A K + + + +V++ N +L G +A L MLR G
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 383 PNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSF 442
P+ +TF L+ GLL + M Q G +P Y ++ + +DRA+ +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 443 IEGMLIE---PTAAIWGALLGASWMHKKIE 469
+E M+ P + +L A K+E
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 178/405 (43%), Gaps = 20/405 (4%)
Query: 92 REGRLVHSHFL---LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN---KDT-V 144
+EGR+ + + LQ D+ S++ +A G A VF +M K T +
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 145 TWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHG 204
T+ ++ + + + + + ++ G P+ +T ++L+ CC + + QV
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 205 CCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXX 261
GF + ++L+D+Y + EA V +E+ G + V++N+LI
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 262 XXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYV 321
L +M +G FTY+ LL G +E + M +G K
Sbjct: 364 MLDEAME--LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 322 GNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
N + MY G ++ K+FD + + D+V+ N++L + Q+G E +FK+M
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGL-- 435
R G P TF +L++A S G ++ ++ M GV P +S Y ++ L R G+
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 436 -LDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
++ ++ +E +P + +LL A K+I + A++V+
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 203/470 (43%), Gaps = 35/470 (7%)
Query: 70 AVEPDRALYQRLLKTCTKLGKL-REGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDL 128
+ PD Y L+ TC K G L +E V ++ D V N++L +Y +
Sbjct: 274 GIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEE--MKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 129 EHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLS 184
+ A +V +EM + VT+ S+I+ YA++ +A+ L M G++P+ FT +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE--KGTKPDVFTYT 388
Query: 185 SLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL--- 241
+L+ + G N+ ++ + MY G E +FDE+
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
G + V+WN L+ +F +M+R G+ T++ L+ + S GS E
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSG--VFKEMKRAGFVPERETFNTLISAYSRCGSFE 506
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF----DRLVKVDVVSCNSML 357
Q ++ ML +G NT+L A+ G + KV D K + ++ S+L
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 358 IGYAQHGFGKEAVV---LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF 414
YA GKE + L +++ IEP + +L+ CS LL E ER F +++
Sbjct: 567 HAYAN---GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 415 GVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMHKKIEMG 471
G P ++ +V + GR ++ +A ++ M P+ A + +L+ +MH +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM---YMHSRSADF 680
Query: 472 AYAAQKVFELDPFYSGAHVLLANI----YASAGRWKEAANIRKMMKDSGL 517
+ + + E+ ++ N Y R ++A+ I M++SG+
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/421 (18%), Positives = 170/421 (40%), Gaps = 48/421 (11%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
+PD Y LL + GK+ + ++N + ++ N+ + MY G
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEE--MRNAGCKPNICTFNAFIKMYGNRGKFT 436
Query: 130 HARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
++FDE+ + D VTW +++ + QN + +F +M R +G P T ++
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR--AGFVPERETFNT 494
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL--GR 243
L+ S+ V+ G ++ ++++ AR G +++ V E+ GR
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 244 WK-NEVSWNALIXXXXXXXXX---------------------------------XXXXXX 269
K NE+++ +L+
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
F++++ G+ T ++++ + + + +M + G N+L++M+
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 330 AKSGSISDA----RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
++S + R++ + +K D++S N+++ Y ++ ++A +F +M GI P+
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEG 445
IT+ + + + + + +E + M + G P + Y IVD + D A F+E
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVED 794
Query: 446 M 446
+
Sbjct: 795 L 795
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 141/321 (43%), Gaps = 37/321 (11%)
Query: 116 NSVLFMYARCGDLEHA----RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
N+++ Y+RCG E A R++ D D T+ +++ A+ + + +M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG---------SSLV 222
G +PNE T C L+ +Y +G+++ H + V+ G +LV
Sbjct: 553 GRC--KPNELTY------CSLLHAYANGKEIG---LMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 223 DMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
+ ++C L EA+ F EL G + + N+++ + M+ G
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG--VLDYMKERG 659
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK--LVGYVGNTLLHMYAKSGSISD 337
+ + TY++L+ S + + + +L G K ++ Y NT+++ Y ++ + D
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY--NTVIYAYCRNTRMRD 717
Query: 338 ARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
A ++F + + DV++ N+ + YA +EA+ + + M++ G PN T+ S++
Sbjct: 718 ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Query: 394 ACSHAGLLDEGERYFQLMRQF 414
DE + + + +R
Sbjct: 778 GYCKLNRKDEAKLFVEDLRNL 798
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSL-EQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
+F KM+ +G T TY+ +L +G+ + L M G Y NTL+
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 330 AKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
+ +A +VF+ + D V+ N++L Y + KEA+ + +M+ +G P+
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEG 445
+T+ SL++A + G+LDE M + G +P V Y ++ RAG ++ AMS E
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 446 ML---IEPTAAIWGALLGASWMHKKIE--MGAYAAQKVFELDPFYSGAHVLLANIYASAG 500
M +P + A + K M + V L P + LLA ++ G
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA-VFGQNG 468
Query: 501 RWKEAANIRKMMKDSGLKKE 520
E + + K MK +G E
Sbjct: 469 MDSEVSGVFKEMKRAGFVPE 488
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 220/521 (42%), Gaps = 79/521 (15%)
Query: 3 VCMYPITTRV--KLVQRHSVT-LRRLWQ--TAISDDNDNVPELDKSYYIIDDRNLLRRSK 57
+ +P R LVQR+S+T + L+ AI D DNV + ++ R LR K
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNV----TTQLLM--RASLREEK 248
Query: 58 TG--LHVLD-LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
L VL I+RGA EPD LY ++ C K L ++ LL+ + V
Sbjct: 249 PAEALEVLSRAIERGA-EPDSLLYSLAVQACCKTLDL-----AMANSLLREMKEKKLCVP 302
Query: 115 Q----NSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLF 166
SV+ + G+++ A ++ DEM + + V TS+ITG+ +N V ALVLF
Sbjct: 303 SQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLF 362
Query: 167 PDMLRGGSGSRPNEFTLSSLVK-------------------CCGLIPS------------ 195
M + G PN T S L++ GL PS
Sbjct: 363 DKMEK--EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 196 ----YGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEV 248
+ + ++ ++ G NVFV ++++ + G EA + ++ G N V
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 249 SWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHG 308
S+N ++ +F+ + +G +TYS L+ + +
Sbjct: 480 SYNNVMLGHCRQKNMDLARI--VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 309 HMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK-----VDVVSCNSMLIGYAQH 363
HM S ++ G V T+++ K G S AR++ +++ V +S NS++ G+ +
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
G AV +++M +GI PN IT+ SL+ +D+ M+ GV+ + Y
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 424 AKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAIWGALLGA 461
++D + ++ A + +L E P+ I+ +L+
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 153/368 (41%), Gaps = 19/368 (5%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLF 166
++ + N++L + G + A ++ +M ++ + V++ +++ G+ + + A ++F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
++L G +PN +T S L+ C + +V N V ++++
Sbjct: 502 SNILE--KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 227 RCGFLGEAQAVFDELGRWK----NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
+ G +A+ + + K + +S+N++I + +M G
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA--YEEMCGNGISP 617
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
TY++L+ ++Q + M G KL L+ + K ++ A +F
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 343 DRLVKVDVVSC----NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
L++ + NS++ G+ G A+ L+K+ML+DG+ + T+ +L+
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIW 455
G L + M+ G+ P Y IV+ L + G + + E M + P I+
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 456 GALLGASW 463
A++ +
Sbjct: 798 NAVIAGHY 805
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 149/350 (42%), Gaps = 65/350 (18%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ L V++ + +E + +YQ ++ K+G+ + R + ++ +++ + + N
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN-MIEEKRLCVSCMSYN 588
Query: 117 SVLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDML 170
S++ + + G+++ A ++EM PN +T+TS++ G +N R AL + +M
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPN--VITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
G VK IP+YG +L+D + +
Sbjct: 647 NKG-------------VKLD--IPAYG----------------------ALIDGFCKRSN 669
Query: 231 LGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
+ A A+F EL G ++ +N+LI L+ KM ++G TY
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD--LYKKMLKDGLRCDLGTY 727
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHM-----YAKSGSISDARKVF 342
+ L+ G L+ G + L + + VG V + +++ +K G K+F
Sbjct: 728 TTLID-----GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 343 DRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
+ + V +V+ N+++ G+ + G EA L +ML GI P+ TF
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 88 LGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DT 143
LG+ + L F P V D + + N+++ +Y+R G A+++ D M + D
Sbjct: 201 LGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDL 260
Query: 144 VTWTSMITGYAQNERAVDAL-VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQV 202
+++ ++I ++ L V DM+R SG RP+ T ++L+ C + +V
Sbjct: 261 ISFNTLINARLKSGGLTPNLAVELLDMVR-NSGLRPDAITYNTLLSACSRDSNLDGAVKV 319
Query: 203 HGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXX 259
H +++ ++++ +Y RCG EA+ +F EL G + + V++N+L+
Sbjct: 320 FEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL--YAF 377
Query: 260 XXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG 319
++ +MQ+ G+G E TY
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTY-------------------------------- 405
Query: 320 YVGNTLLHMYAKSGSISDARKVFDRLVKV-----DVVSCNSMLIGYAQHGFGKEAVVLFK 374
NT++HMY K G + A +++ + + D ++ ++ + EA L
Sbjct: 406 ---NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
+ML GI+P T+ +L+ + AG +E E F M + G +P Y+ ++D+L R
Sbjct: 463 EMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGN 522
Query: 435 LLDRAMSFIEGML 447
+A M+
Sbjct: 523 ETRKAWGLYRDMI 535
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 178/406 (43%), Gaps = 41/406 (10%)
Query: 192 LIPSYGDGR------QVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK 245
+I +YG + V G + G ++ +SL+ YA+CG A+A+F+ + R
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 246 NEVSWNAL-IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+ ++ I + ++Q G+ +++ + +L + + G++ + K
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGY 360
++ M +G + ++ + K + DA + + KV++ NSML Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
K+ V +++++ G+EP++ T+ +L+ +EG Q MR G++PK+
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYA-----A 475
Y ++ G+ L++A E +L + G L S+ H +++ + A
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSK------GLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 476 QKVFEL------DPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
+K+ ++ +P + H+L+ + Y+S+G +EA + +KD+ E+E
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVS-YSSSGNPQEAEKVLSNLKDT-----------EVE 1099
Query: 530 NSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPDTRHVLLFV 575
+ + S A+ + E+L E+K+ G PD R FV
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYNSGIERL-LEMKKEGLEPDHRIWTCFV 1144
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 49/321 (15%)
Query: 213 DNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXX 269
D V V ++++ +Y+R G +AQ + D + G + +S+N LI
Sbjct: 223 DRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAV 282
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
L ++ G TY NTLL
Sbjct: 283 ELLDMVRNSGLRPDAITY-----------------------------------NTLLSAC 307
Query: 330 AKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
++ ++ A KVF+ + + D+ + N+M+ Y + G EA LF ++ G P+
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEG 445
+T+ SLL A + ++ + +Q M++ G Y I+ + G+ G LD A+ +
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 446 ML----IEPTAAIWGALLGA-SWMHKKIEMGAYAAQKV-FELDPFYSGAHVLLANIYASA 499
M P A + L+ + ++ +E A ++ + + P L+ YA A
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG-YAKA 486
Query: 500 GRWKEAANIRKMMKDSGLKKE 520
G+ +EA + M SG K +
Sbjct: 487 GKREEAEDTFSCMLRSGTKPD 507
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 162/380 (42%), Gaps = 29/380 (7%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEM----PNKDTVTWTSMITGYAQNERAVDALVLF 166
DL NS++ YA+CG E AR +F+ M P+ + ++ + R + V+
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
++ G + ++ ++ ++ + + ++++ G+ + + ++++
Sbjct: 846 EEL--QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 227 RCGFLGEAQAVFDEL--GRWKNEVS-WNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+ + +A+ + E+ +K E++ WN+++ ++ +++ G
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ--VYQRIKETGLEPD 961
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKV 341
E TY+ L+ E+G L M G KL Y +L+ + K + A ++
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTY--KSLISAFGKQKCLEQAEQL 1019
Query: 342 FDRLV----KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F+ L+ K+D ++M+ G +A L + M GIEP T L+ + S
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSS 1079
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML------IEPT 451
+G E E+ ++ VE Y+ ++D R+ + S IE +L +EP
Sbjct: 1080 SGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN---SGIERLLEMKKEGLEPD 1136
Query: 452 AAIWGALL-GASWMHKKIEM 470
IW + AS+ +KIE+
Sbjct: 1137 HRIWTCFVRAASFSKEKIEV 1156
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 148/319 (46%), Gaps = 15/319 (4%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLF 166
++VI N+V+ + DL +A +VF M K D VT+ ++I+G + + R DA L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
DM++ PN ++L+ + + R ++ + NVF +SL++ +
Sbjct: 243 RDMVK--RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 227 RCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
G LG+A+ +FD + G + + V++N LI LF +M +G
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK--LFCEMTYQGLVGD 358
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
FTY+ L+ G L + + M+ G N LL +G I A + +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 344 RLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAG 399
L K VD+++ N ++ G + KEA LF+ + R G++P+ I ++++++ G
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKG 478
Query: 400 LLDEGERYFQLMRQFGVEP 418
L E ++ + M++ G P
Sbjct: 479 LQREADKLCRRMKEDGFMP 497
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 164/405 (40%), Gaps = 24/405 (5%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P + R+L K+ K +++ + ++N + DL ++ + RC L A
Sbjct: 77 PSIVDFTRVLTVIAKMNKF--DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 133 QVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
+ +M VT S++ G+ Q R +A+ L M G G PN ++++
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM--DGFGFVPNVVIYNTVIN 192
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK--- 245
+ +V C K G + ++L+ + G +A + ++ + K
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 246 NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
N + + ALI L+ +M R FTY++L+ G L K+
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARN--LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY 310
Query: 306 LHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV----DVVSCNSMLIG 359
+ M+ G +V Y NTL+ + KS + D K+F + D + N+++ G
Sbjct: 311 MFDLMVSKGCFPDVVTY--NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 360 YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPK 419
Y Q G A +F +M+ G+ P+ +T+ LL + G +++ + +++ ++
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGA 461
+ Y I+ L R L A + ++P A + ++
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLV------GYVGN-----TLLHMYAKSGSISDARKV 341
S ++GSL G + G+ + LV G+V N T+++ K+ +++A +V
Sbjct: 148 SIVTLGSLLNG-FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 342 F----DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F + ++ D V+ N+++ G + G +A L + M++ I+PN I F +L+
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAI 454
G L E ++ M + V P V Y +++ G L A + M+ + P
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 455 WGALLGASWMHKKIEMGAYAAQKVFELDPFYSG------AHVLLANIYASAGRWKEAANI 508
+ L+ K++E G K+F + Y G + L + Y AG+ A +
Sbjct: 327 YNTLITGFCKSKRVEDG----MKLF-CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 509 RKMMKDSGLKKE 520
M D G+ +
Sbjct: 382 FNRMVDCGVSPD 393
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 188/462 (40%), Gaps = 54/462 (11%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
+P + Y ++ + G+ + V++ + D D + ++++ Y + G + A
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTE-MCNEGDCFPDTITYSALISSYEKLGRNDSA 252
Query: 132 RQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
++FDEM + +T+++ Y + + AL LF +M R G P +T + L+
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS--PTVYTYTELI 310
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWK-- 245
K G + + + G +V ++L+++ + G + E VF E+G W+
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 246 -NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
VS+N +I F KM+ + +EFTYS L+ +E+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSS-WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHG 364
L M + G +L++ K+ A ++F L K + + +S +
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL-KENFGNVSSRVYAVMIKH 488
Query: 365 FGK-----EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPK 419
FGK EAV LF +M G P+ + +L++ AG+++E + M + G
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Query: 420 VSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
++ + I++ R G+ RA+ E + I+P + LLG
Sbjct: 549 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC--------------- 593
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
+A AG ++EAA + + MKD G +
Sbjct: 594 -------------------FAHAGMFEEAARMMREMKDKGFE 616
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 160/385 (41%), Gaps = 45/385 (11%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
+ + L + + + R P Y L+K K G++ E + L + D+V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG--LTPDVVF 340
Query: 115 QNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDML 170
N+++ + + G +E VF EM V++ ++I +++ V + + D +
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
+ S S P+EFT S L+ G+C V +L+
Sbjct: 401 KADSVS-PSEFTYSILI---------------------DGYCKTNRVEKALL-------L 431
Query: 231 LGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
L E DE G ++ +LI LF +++ V+ Y+ +
Sbjct: 432 LEE----MDEKGFPPCPAAYCSLINALGKAKRYEAANE--LFKELKENFGNVSSRVYAVM 485
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVFDRLV 346
+ G L + L M G Y N L+ K+G I++A RK+ +
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
+ D+ S N +L G+A+ G + A+ +F+ + GI+P+ +T+ +LL +HAG+ +E R
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAAR 605
Query: 407 YFQLMRQFGVEPKVSHYAKIVDLLG 431
+ M+ G E Y+ I+D +G
Sbjct: 606 MMREMKDKGFEYDAITYSSILDAVG 630
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 108/257 (42%), Gaps = 14/257 (5%)
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVG-NTLLHMYAKSGSISDARKV 341
T TY++++ G E+ ++ M G + + L+ Y K G A ++
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 342 FDRL---VKVDVVSCNSMLIG-YAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
FD + + L+G Y + G ++A+ LF++M R G P T+ L+
Sbjct: 256 FDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGK 315
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI---EPTAAI 454
AG +DE +++ M + G+ P V ++++LG+ G ++ + M + PT
Sbjct: 316 AGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS 375
Query: 455 WGALLGA---SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKM 511
+ ++ A S H + K + P + +L + Y R ++A + +
Sbjct: 376 YNTVIKALFESKAHVSEVSSWFDKMKADSVSP-SEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 512 MKDSGLKKEPA--CSWV 526
M + G PA CS +
Sbjct: 435 MDEKGFPPCPAAYCSLI 451
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 186/453 (41%), Gaps = 56/453 (12%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R L +L+ + PD + ++ K ++ E + + L++ D +
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG--FAPDDIT 324
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
++ + G ++ A+ +F +P + V + ++I G+ + R DA + DM+
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS-Y 383
Query: 175 GSRPNEFTLSSLVKCC---GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G P+ T +SL+ GL+ G +V G NV+ + LVD + + G +
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLV---GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI 440
Query: 232 GEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
EA V +E+ G N V +N LI +F +M R+G +T++
Sbjct: 441 DEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE--IFREMPRKGCKPDVYTFN 498
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV-- 346
+L+ V ++ WL M+ G NTL++ + + G I +ARK+ + +V
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 347 --------------------KVDV-----------------VSCNSMLIGYAQHGFGKEA 369
+VD +SCN ++ G + G +EA
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
V K+M+ G P+ +TF SL+ AG +++G F+ ++ G+ P + ++
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 430 LGRAGLL-DRAMSFIEGML--IEPTAAIWGALL 459
L + G + D + EG+ P W LL
Sbjct: 679 LCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 157/361 (43%), Gaps = 29/361 (8%)
Query: 64 DLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYA 123
D++ + PD Y L+ K G + G + ++N + ++ ++ +
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLV--GLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 124 RCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPN 179
+ G ++ A V +EM +TV + +I+ + + R +A+ +F +M R G +P+
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR--KGCKPD 493
Query: 180 EFTLSSLVKCCGLIPSYGDGRQVHGCCW------KHGFCDNVFVGSSLVDMYARCGFLGE 233
+T +SL+ GL + ++ W G N ++L++ + R G + E
Sbjct: 494 VYTFNSLIS--GLC----EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 234 AQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
A+ + +E+ G +E+++N+LI LF KM R+G+ + + + L
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS--LFEKMLRDGHAPSNISCNIL 605
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----V 346
+ G +E+ M+ G N+L++ ++G I D +F +L +
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 347 KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGER 406
D V+ N+++ + GF +A +L + + DG PN T+ LL + LD
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Query: 407 Y 407
Y
Sbjct: 726 Y 726
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 141/365 (38%), Gaps = 54/365 (14%)
Query: 208 KHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE---LGRWKNEVSWNALIXXXXXXXXXX 264
KHG N + +L+ ++C + EA + +E +G + ++N +I
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI--LGLCKFDR 302
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNT 324
+ +M G+ + TY L+ +G ++ K L + K ++V + NT
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP--EIV--IFNT 358
Query: 325 LLHMYAKSGSISDARKVFDRLVKV-----DVVSCNSMLIGYAQHG--------------- 364
L+H + G + DA+ V +V DV + NS++ GY + G
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 365 ------------------FGK--EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
GK EA + +M DG++PN + F L++A + E
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAA---IWGALLGA 461
F+ M + G +P V + ++ L + A+ + M+ E A + L+ A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 462 SWMHKKI-EMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANI-RKMMKDSGLKK 519
+I E + VF+ P + L AG +A ++ KM++D
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 520 EPACS 524
+C+
Sbjct: 599 NISCN 603
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 106/259 (40%), Gaps = 17/259 (6%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
+F M T FT+ ++ + +V ++ L M K G + TL+H +
Sbjct: 204 VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLS 263
Query: 331 KSGSISDARKVFDRLVKV----DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K +++A ++ + + + D + N +++G + EA + +ML G P+DI
Sbjct: 264 KCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDI 323
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
T+ L+ G +D + F + + P++ + ++ G LD A + + M
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 447 L----IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE--LDP-FYSGAHVLLANIYASA 499
+ I P + +L+ W + + + P YS + +L + +
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS--YTILVDGFCKL 437
Query: 500 GRWKEAANIRKMMKDSGLK 518
G+ EA N+ M GLK
Sbjct: 438 GKIDEAYNVLNEMSADGLK 456
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 209/494 (42%), Gaps = 43/494 (8%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDAL 163
+R D+ I V+ DL A+++ M + + V + +I G + ++ +A+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
+ D+ G +P+ T +LV + + G ++ F + SSLV+
Sbjct: 283 GIKKDL--AGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVE 340
Query: 224 MYARCGFLGEAQAVFD---ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
+ G + EA + + G N +NALI LF +M + G
Sbjct: 341 GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL--LFDRMGKIGL 398
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR- 339
+ TYS L+ G L+ G M+ +G KL Y N+L++ + K G IS A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 340 ---KVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
++ ++ ++ VV+ S++ GY G +A+ L+ +M GI P+ TF +LL+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 397 HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAA 453
AGL+ + + F M ++ V+P Y +++ G + +A F++ M I P
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 454 IWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG-------AHVLLANIYASAGRWKEAA 506
+ L+ H G + KVF +D + G + L + + G+ +EA
Sbjct: 579 SYRPLI-----HGLCLTGQASEAKVF-VDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 507 NIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVP 566
++ + M G+ + C V I+ S+ KD+ K++ L +E+ + G P
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLK----------HKDR--KLFFGLLKEMHDRGLKP 680
Query: 567 DTRHVLLFVDQHEK 580
D +D K
Sbjct: 681 DDVIYTSMIDAKSK 694
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 207/528 (39%), Gaps = 82/528 (15%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQ--NSVL 119
+ D + + + P+ Y L+ + GKL FL + D L + NS++
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL----SFLGEMVDTGLKLSVYPYNSLI 444
Query: 120 FMYARCGDLEHARQVFDEMPNKD----TVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+ + GD+ A EM NK VT+TS++ GY + AL L+ +M G G
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT--GKG 502
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQ 235
P+ +T ++L+ GL R G + +A
Sbjct: 503 IAPSIYTFTTLLS--GLF---------------------------------RAGLIRDAV 527
Query: 236 AVFDELGRWK---NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
+F+E+ W N V++N +I +M +G ++Y L+
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE--FLKEMTEKGIVPDTYSYRPLIH 585
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVFDRLVKV 348
G + K + K +L LLH + + G + +A +++ R V +
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
D+V ++ G +H K L K+M G++P+D+ + S++ A S G E +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA---MSFIEGMLIEPTAAIWGALL-----G 460
LM G P Y +++ L +AG ++ A S ++ + P +G L G
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 461 ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE 520
M K +E+ + + Y+ +L + GR +EA+ + M G+
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYN----MLIRGFCRQGRIEEASELITRMIGDGV--S 819
Query: 521 PAC-SWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYVPD 567
P C ++ + N + ND+ K I++W + ++ G PD
Sbjct: 820 PDCITYTTMIN--ELCRRNDVK-----KAIELWNSMTEK----GIRPD 856
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 165/383 (43%), Gaps = 17/383 (4%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L +L +++G +E D +Y ++ + + + + + N +R ++V NS+
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE--MDNKGIRPNVVTYNSL 296
Query: 119 LFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ G A ++ +M N + VT++++I + + + V+A L+ +M++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--R 354
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
P+ FT SSL+ + + + + NV ++L+ + + + E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 235 QAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+F E+ G N V++N LI +F KM +G TYS LL
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK--IFKKMVSDGVPPDIITYSILL 472
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VK 347
G LE+ + ++ KS + Y N ++ K+G + D +F L VK
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
+V+ +M+ G+ + G +EA LF++M DG PN T+ +L+ A G
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 408 FQLMRQFGVEPKVSHYAKIVDLL 430
+ MR G S + ++++L
Sbjct: 593 IKEMRSCGFVGDASTISMVINML 615
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 166/367 (45%), Gaps = 22/367 (5%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLF 166
DL +V+ + GD++ A + +M D V +T++I + DAL LF
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
+M G RPN T +SL++C + D ++ + NV S+L+D +
Sbjct: 279 TEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 227 RCGFLGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+ G L EA+ ++DE+ + + ++++LI +F M +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH--MFELMISKDCFPN 394
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKV 341
TY+ L+ +E+G L M S R LVG NTL+ ++G A+K+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 342 FDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F ++V D+++ + +L G ++G ++A+V+F+ + + +EP+ T+ ++
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAI 454
AG +++G F + GV+P V Y ++ R GL + A + M + P +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 455 WGALLGA 461
+ L+ A
Sbjct: 573 YNTLIRA 579
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 174/380 (45%), Gaps = 28/380 (7%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALV 164
D+V +S+L Y + A + D+M PN TVT+ ++I G + +A +A+
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN--TVTFNTLIHGLFLHNKASEAVA 206
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD---GRQVHGCCWKHGFCDNVFVGSSL 221
L M+ G +P+ FT ++V GL GD + K +V + +++
Sbjct: 207 LIDRMV--ARGCQPDLFTYGTVVN--GLCKR-GDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 222 VDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
+D + +A +F E+ G N V++N+LI L + M
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR--LLSDMIER 319
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
T+SAL+ + G L + + L+ M+K + ++L++ + + +A
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 339 RKVFDRLVKVD----VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
+ +F+ ++ D VV+ N+++ G+ + +E + LF++M + G+ N +T+ +L+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM---SFIEGMLIEPT 451
AG D ++ F+ M GV P + Y+ ++D L + G L++A+ +++ +EP
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 452 AAIWGALLGASWMHKKIEMG 471
+ ++ K+E G
Sbjct: 500 IYTYNIMIEGMCKAGKVEDG 519
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 164/369 (44%), Gaps = 31/369 (8%)
Query: 114 IQNSVLFMYARCGDLEHARQVFDEM----PNKDTVTWTSMITGYAQNERAVDALVLFPDM 169
+ ++++ R G + A+++F+ ++++I+ Y ++ +A+ +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 170 LRGGSGSRPNEFTLSSLVKCCG-------LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLV 222
G RPN T ++++ CG + + D Q ++G + +SL+
Sbjct: 295 KE--YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ------RNGVQPDRITFNSLL 346
Query: 223 DMYARCGFLGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREG 279
+ +R G A+ +FDE+ + E S+N L+ + A+M +
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE--ILAQMPVKR 404
Query: 280 YGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDAR 339
+YS ++ + G ++ L G M G L NTLL +Y K G +A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 340 KVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTAC 395
+ + +K DVV+ N++L GY + G E +F +M R+ + PN +T+ +L+
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 396 SHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTA 452
S GL E F+ + G+ V Y+ ++D L + GL+ A+S I+ M I P
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 453 AIWGALLGA 461
+ +++ A
Sbjct: 585 VTYNSIIDA 593
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 14/354 (3%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
++++ Y R G E A VF+ M + VT+ ++I + + F D ++
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
+G +P+ T +SL+ C + R + +VF ++L+D + G +
Sbjct: 332 R-NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 232 GEAQAVFDELGRWK---NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
A + ++ + N VS++ +I LF +M+ G + +Y+
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN--LFGEMRYLGIALDRVSYN 448
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL--- 345
LL + VG E+ + M G K N LL Y K G + +KVF +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 346 -VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
V ++++ ++++ GY++ G KEA+ +F++ G+ + + + +L+ A GL+
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
M + G+ P V Y I+D GR+ +DR+ + G + +++ AL
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 39/344 (11%)
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD---E 240
S+++ G +++ + G+ + V+ S+L+ Y R G EA +VF+ E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
G N V++NA+I F +MQR G T+++LL S G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAK-FFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSM 356
E + L M + + NTLL K G + A ++ ++ + +VVS +++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+ G+A+ G EA+ LF +M GI + +++ +LL+ + G +E + M G+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQ 476
+ V Y ++ G+ G D M E H + Y+
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE---------------HVLPNLLTYST- 519
Query: 477 KVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE 520
L + Y+ G +KEA I + K +GL+ +
Sbjct: 520 ---------------LIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 162/397 (40%), Gaps = 64/397 (16%)
Query: 63 LDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMY 122
D + R V+PDR + LL C++ G R + + N + D+ N++L
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE--MTNRRIEQDVFSYNTLLDAI 384
Query: 123 ARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFP----------- 167
+ G ++ A ++ +MP K + V+++++I G+A+ R +AL LF
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 168 --------------------DMLR--GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC 205
D+LR G + + T ++L+ G Y + ++V
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 206 CWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXX 262
+ N+ S+L+D Y++ G EA +F E G + V ++ALI
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 263 XXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ-GKWLHGHMLKSGRK----L 317
L +M +EG TY++++ + ++++ + +G L L
Sbjct: 565 VGSAVS--LIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Query: 318 VGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQML 377
GN ++ ++ + + S+ R D + +SC + +F++M
Sbjct: 623 TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC---------------ILEVFRKMH 667
Query: 378 RDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQF 414
+ I+PN +TF ++L ACS ++ + +R F
Sbjct: 668 QLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLF 704
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 46/374 (12%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
+++++ R ++P+ +Y ++ ++ KL E S + Q + D V+ +++
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG--ILPDTVVYTTLIDG 360
Query: 122 YARCGDLEHARQVFDEMPNKD----TVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+ + GD+ A + F EM ++D +T+T++I+G+ Q V+A LF +M G
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--CKGLE 418
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
P+ T + L+ D +VH + G NV ++L+D + G L A +
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
E+ WK + N FTY++++
Sbjct: 479 LHEM--WKIGLQPNI--------------------------------FTYNSIVNGLCKS 504
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV----KVDVVSC 353
G++E+ L G +G TL+ Y KSG + A+++ ++ + +V+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
N ++ G+ HG ++ L ML GI PN TF SL+ L ++ M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 414 FGVEPKVSHYAKIV 427
GV P Y +V
Sbjct: 625 RGVGPDGKTYENLV 638
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 14/259 (5%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L M+R+G + Y +++ + L + + M++ G V TL+ +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 331 KSGSISDARKVF----DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K G I A K F R + DV++ +++ G+ Q G EA LF +M G+EP+ +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
TF L+ AG + + R M Q G P V Y ++D L + G LD A + M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 447 L---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGA----HVLLANIYASA 499
++P + +++ IE A + V E + A + L + Y +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEE---AVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 500 GRWKEAANIRKMMKDSGLK 518
G +A I K M GL+
Sbjct: 540 GEMDKAQEILKEMLGKGLQ 558
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 151/358 (42%), Gaps = 18/358 (5%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLR 171
N V+ + G ++ A + M K D +++++++ GY + L M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G +PN + S++ I + + + G + V ++L+D + + G +
Sbjct: 310 --KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 232 GEAQAVFDELGR---WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
A F E+ + +++ A+I LF +M +G T++
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK--LFHEMFCKGLEPDSVTFT 425
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
L+ G ++ +H HM+++G TL+ K G + A ++ + K+
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 349 ----DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
++ + NS++ G + G +EAV L + G+ + +T+ +L+ A +G +D+
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL 459
+ + M G++P + + +++ G+L+ + ML I P A + +L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 156/374 (41%), Gaps = 46/374 (12%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
+++++ R ++P+ +Y ++ ++ KL E S + Q + D V+ +++
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG--ILPDTVVYTTLIDG 360
Query: 122 YARCGDLEHARQVFDEMPNKD----TVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+ + GD+ A + F EM ++D +T+T++I+G+ Q V+A LF +M G
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF--CKGLE 418
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
P+ T + L+ D +VH + G NV ++L+D + G L A +
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
E+ WK + N FTY++++
Sbjct: 479 LHEM--WKIGLQPNI--------------------------------FTYNSIVNGLCKS 504
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLV----KVDVVSC 353
G++E+ L G +G TL+ Y KSG + A+++ ++ + +V+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQ 413
N ++ G+ HG ++ L ML GI PN TF SL+ L ++ M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 414 FGVEPKVSHYAKIV 427
GV P Y +V
Sbjct: 625 RGVGPDGKTYENLV 638
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 14/259 (5%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L M+R+G + Y +++ + L + + M++ G V TL+ +
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 331 KSGSISDARKVF----DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K G I A K F R + DV++ +++ G+ Q G EA LF +M G+EP+ +
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
TF L+ AG + + R M Q G P V Y ++D L + G LD A + M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 447 L---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGA----HVLLANIYASA 499
++P + +++ IE A + V E + A + L + Y +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEE---AVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 500 GRWKEAANIRKMMKDSGLK 518
G +A I K M GL+
Sbjct: 540 GEMDKAQEILKEMLGKGLQ 558
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 151/358 (42%), Gaps = 18/358 (5%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLR 171
N V+ + G ++ A + M K D +++++++ GY + L M R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G +PN + S++ I + + + G + V ++L+D + + G +
Sbjct: 310 --KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 232 GEAQAVFDELGR---WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
A F E+ + +++ A+I LF +M +G T++
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK--LFHEMFCKGLEPDSVTFT 425
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV 348
L+ G ++ +H HM+++G TL+ K G + A ++ + K+
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 349 ----DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
++ + NS++ G + G +EAV L + G+ + +T+ +L+ A +G +D+
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL 459
+ + M G++P + + +++ G+L+ + ML I P A + +L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 168/385 (43%), Gaps = 52/385 (13%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREG-RLVHSHFLLQNPDVRDDLVIQNS 117
L + D ++ P+ Y L+ KL K+ +G +L+ S L + +L+ N
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL---KGLEPNLISYNV 280
Query: 118 VLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
V+ R G ++ V EM + D VT+ ++I GY + ALV+ +MLR
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR-- 338
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
G P+ T +SL+ + + G C N ++LVD +++ G++ E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 234 AQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
A V E M G+ + TY+AL+
Sbjct: 399 AYRVLRE----------------------------------MNDNGFSPSVVTYNALING 424
Query: 294 ASSVGSLEQGKWLHGHMLKSGRK--LVGYVGNTLLHMYAKSGSISDA----RKVFDRLVK 347
G +E + M + G +V Y +T+L + +S + +A R++ ++ +K
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSY--STVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
D ++ +S++ G+ + KEA L+++MLR G+ P++ T+ +L+ A G L++ +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGR 432
M + GV P V Y+ +++ L +
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNK 567
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 20/327 (6%)
Query: 209 HGFCDNVFVGSSLVDMYARCG-FLGEAQAVFDELGRWKNEVSWNAL---IXXXXXXXXXX 264
HGF V ++++D R + A+ VF E+ +++VS N I
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM--LESQVSPNVFTYNILIRGFCFAGN 220
Query: 265 XXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQG-KWLHGHMLKSGR-KLVGYVG 322
LF KM+ +G TY+ L+ + ++ G K L LK L+ Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY-- 278
Query: 323 NTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLR 378
N +++ + G + + V + + +D V+ N+++ GY + G +A+V+ +MLR
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 379 DGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDR 438
G+ P+ IT+ SL+ + AG ++ + MR G+ P Y +VD + G ++
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 439 AMSFIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE--LDPFYSGAHVLLA 493
A + M P+ + AL+ + K+E + + E L P +L+
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 494 NIYASAGRWKEAANIRKMMKDSGLKKE 520
+ + EA +++ M + G+K +
Sbjct: 459 G-FCRSYDVDEALRVKREMVEKGIKPD 484
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 169/417 (40%), Gaps = 63/417 (15%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R K VL ++R D Y L+K K G + ++H+ L + ++
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG--LTPSVIT 347
Query: 115 QNSVLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPD 168
S++ + G++ A + D+M PN+ T +T+++ G++Q +A + +
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT--YTTLVDGFSQKGYMNEAYRVLRE 405
Query: 169 MLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARC 228
M +G P+ T ++L+ + D V + G +V S+++ + R
Sbjct: 406 M--NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 229 GFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
+ EA V E+ G + +++++LI L+ +M R G EF
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD--LYEEMLRVGLPPDEF 521
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
TY+AL+ + G LE+ LH M++ G
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKG------------------------------- 550
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH-------- 397
V DVV+ + ++ G + +EA L ++ + P+D+T+ +L+ CS+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 398 -------AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML 447
G++ E ++ F+ M +P + Y ++ RAG + +A + + M+
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 178/402 (44%), Gaps = 22/402 (5%)
Query: 52 LLRRSKTGL--HVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR 109
L +R T L ++L+ +++G +EP +Y ++ K + + + ++ +R
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE--METKGIR 288
Query: 110 DDLVIQNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVL 165
++V +S++ G A ++ +M N D T++++I + + + V+A L
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQV-HGCCWKHGFCDNVFVGSSLVDM 224
+ +M++ P+ T SSL+ + + +Q+ KH F D V ++L+
Sbjct: 349 YDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD-VVTYNTLIKG 405
Query: 225 YARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
+ + + E VF E+ G N V++N LI +F +M +G
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE--IFKEMVSDGVP 463
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
TY+ LL G LE+ + ++ +S + Y N ++ K+G + D +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 342 FDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F L VK DVV+ N+M+ G+ + G +EA LFK+M DG PN + +L+ A
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLR 583
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G + + MR G S + ++L G LD++
Sbjct: 584 DGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 193/434 (44%), Gaps = 31/434 (7%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALV 164
++V +S+L Y + A + D+M PN TVT+ ++I G + +A +A+
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN--TVTFNTLIHGLFLHNKASEAMA 207
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK--HGFCD-NVFVGSSL 221
L M+ G +P+ T +V GL GD K G + V + +++
Sbjct: 208 LIDRMV--AKGCQPDLVTYGVVVN--GLCKR-GDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 222 VDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
+D + + +A +F E+ G N V++++LI L + M
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR--LLSDMIER 320
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
FT+SAL+ + G L + + L+ M+K ++L++ + + +A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 339 RKVFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA 394
+++F+ +V DVV+ N+++ G+ ++ +E + +F++M + G+ N +T+ L+
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 395 CSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM---SFIEGMLIEPT 451
AG D + F+ M GV P + Y ++D L + G L++AM +++ +EPT
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 452 AAIWGALLGASWMHKKIEMG--AYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIR 509
+ ++ K+E G + + + P + +++ + G +EA +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKEEADALF 559
Query: 510 KMMKDSGLKKEPAC 523
K MK+ G C
Sbjct: 560 KEMKEDGTLPNSGC 573
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 211/502 (42%), Gaps = 39/502 (7%)
Query: 40 LDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHS 99
D + ++ D +L + + + R V P LL KLGK + +
Sbjct: 195 FDALFSVLIDLGMLEEA---IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 100 HFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQ 155
+ R + N ++ + GD+E AR +F+EM + DTVT+ SMI G+ +
Sbjct: 252 DMI--GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 156 NERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNV 215
R D + F +M P+ T ++L+ C G + + +G NV
Sbjct: 310 VGRLDDTVCFFEEM--KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 216 FVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLF 272
S+LVD + + G + +A + ++ G NE ++ +LI L
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI--DANCKIGNLSDAFRLG 425
Query: 273 AKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYA 330
+M + G TY+AL+ +++ + L G M +G L Y N L+H +
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY--NALIHGFV 483
Query: 331 KSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K+ ++ A ++ + L +K D++ + + G + A V+ +M GI+ N +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+ +L+ A +G EG M++ +E V + ++D L + L+ +A+ + +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 447 L----IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE------LDPFYSGAHVLLANIY 496
++ AAI+ A++ ++E AA +FE L P + A+ L +
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVE----AATTLFEQMVQKGLVPDRT-AYTSLMDGN 658
Query: 497 ASAGRWKEAANIRKMMKDSGLK 518
G EA +R M + G+K
Sbjct: 659 FKQGNVLEALALRDKMAEIGMK 680
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/506 (21%), Positives = 195/506 (38%), Gaps = 79/506 (15%)
Query: 126 GDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEF 181
G LE A Q F +M T + ++ +A+ + D F DM+ G+G+RP F
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI--GAGARPTVF 263
Query: 182 TLSSLVKCCGLIPSYGDGRQVHGCCWK---HGFCDNVFVGSSLVDMYARCGFLGEAQAVF 238
T + ++ C + GD G + G + +S++D + + G L + F
Sbjct: 264 TYNIMIDC---MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 239 DELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSAS 295
+E+ E +++NALI + +M+ G +YS L+ +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLE--FYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 296 SVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNS 355
G ++Q + M + G Y +L+ K G++SDA +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR--------------- 423
Query: 356 MLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFG 415
L +ML+ G+E N +T+ +L+ A + E E F M G
Sbjct: 424 ----------------LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 416 VEPKVSHYAKIVDLLGRAGLLDRAMSF---IEGMLIEPTAAIWGALLGASWMHKKIEMGA 472
V P ++ Y ++ +A +DRA+ ++G I+P ++G + +KIE
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 473 YAAQKVFELD-PFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKK---------EPA 522
++ E S + L + Y +G E ++ MK+ ++ +
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 523 CSWVEIENSVHVF--VSNDIAHPQ-------------KDKIIKMWEKLNQEIKEIGYVPD 567
C + +V F +SND KD ++ L +++ + G VPD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 568 TRHVLLFVDQHEKELNLQYHSEKLAL 593
+D + K+ N+ E LAL
Sbjct: 648 RTAYTSLMDGNFKQGNVL---EALAL 670
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 19/399 (4%)
Query: 33 DNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
DN P+L ++ R+ L +L+ V PD + ++ +KLG+
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM------PNKDTVTW 146
+ + + + + R D+V S++ +Y+ G++E+ R VF+ M PN V++
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN--IVSY 226
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCC 206
+++ YA + + AL + D+ + +G P+ + + L+ G G ++V
Sbjct: 227 NALMGAYAVHGMSGTALSVLGDIKQ--NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 207 WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXX 263
K NV ++L+D Y GFL EA +F ++ G N VS L+
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL--AACSRSK 342
Query: 264 XXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN 323
+ + Q G + Y++ + S + LE+ L+ M K K
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 324 TLL----HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
L+ M +IS +++ D + + +S+L Y++ G EA +F QM
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP 418
G EP+ I + S+L A + + + F M G+EP
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 187/473 (39%), Gaps = 89/473 (18%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
++++D + R A+ P R+ Y L+ C G RE V + + V DLV N V
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK--MTDNGVGPDLVTHNIV 122
Query: 119 LFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
L Y A F+ M DT T+ +I ++ ++ AL LF M +
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 182
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
RP+ T +S++ +Y+ G +
Sbjct: 183 ECRPDVVTFTSIM-----------------------------------HLYSVKGEIENC 207
Query: 235 QAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+AVF+ + G N VS+NAL+ Y V + +AL
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMG-----------------------AYAVHGMSGTAL- 243
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF----DRLVK 347
S +G ++Q + +V Y LL+ Y +S A++VF K
Sbjct: 244 ---SVLGDIKQNGIIP--------DVVSYT--CLLNSYGRSRQPGKAKEVFLMMRKERRK 290
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
+VV+ N+++ Y +GF EAV +F+QM +DGI+PN ++ +LL ACS + +
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL-GASW 463
+ G+ + Y + A L++A++ + M ++ + + L+ G+
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 464 MHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
M K E +Y + P + + Y+ G+ EA +I MK +G
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 168/399 (42%), Gaps = 19/399 (4%)
Query: 33 DNDNVPELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLR 92
DN P+L ++ R+ L +L+ V PD + ++ +KLG+
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 93 EGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEM------PNKDTVTW 146
+ + + + + R D+V S++ +Y+ G++E+ R VF+ M PN V++
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN--IVSY 358
Query: 147 TSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCC 206
+++ YA + + AL + D+ + +G P+ + + L+ G G ++V
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQ--NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 207 WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXX 263
K NV ++L+D Y GFL EA +F ++ G N VS L+
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL--AACSRSK 474
Query: 264 XXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGN 323
+ + Q G + Y++ + S + LE+ L+ M K K
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 324 TLL----HMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
L+ M +IS +++ D + + +S+L Y++ G EA +F QM
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP 418
G EP+ I + S+L A + + + F M G+EP
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 187/473 (39%), Gaps = 89/473 (18%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
++++D + R A+ P R+ Y L+ C G RE V + + V DLV N V
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK--MTDNGVGPDLVTHNIV 254
Query: 119 LFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
L Y A F+ M DT T+ +I ++ ++ AL LF M +
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRA 314
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
RP+ T +S++ +Y+ G +
Sbjct: 315 ECRPDVVTFTSIM-----------------------------------HLYSVKGEIENC 339
Query: 235 QAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+AVF+ + G N VS+NAL+ Y V + +AL
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMG-----------------------AYAVHGMSGTAL- 375
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF----DRLVK 347
S +G ++Q + +V Y LL+ Y +S A++VF K
Sbjct: 376 ---SVLGDIKQNGIIP--------DVVSYT--CLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
+VV+ N+++ Y +GF EAV +F+QM +DGI+PN ++ +LL ACS + +
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL-GASW 463
+ G+ + Y + A L++A++ + M ++ + + L+ G+
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 464 MHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSG 516
M K E +Y + P + + Y+ G+ EA +I MK +G
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 180/405 (44%), Gaps = 34/405 (8%)
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGD----LEHA 131
A+Y ++ T + ++G +V L+ +V ++ +Y + G LE +
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKR--LKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 132 RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKC-C 190
R + +E + T++ MI G+ + + +A +F DM++ G +P+ ++++ C
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK--EGMKPDVILYNNIISAFC 565
Query: 191 GL------IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW 244
G+ I + + +++ +H F+ ++ YA+ G + + VFD + R
Sbjct: 566 GMGNMDRAIQTVKEMQKL-----RHRPTTRTFM--PIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 245 ---KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
++N LI + +M G E TY+ ++ +SVG
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVE--ILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVFDRLVKVDVVSCNSML 357
+ + G + + LL KSG + A +++ R + + N ++
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVE 417
G+A+ G EA L +QM ++G++P+ T+ S ++ACS AG ++ + + M GV+
Sbjct: 737 DGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Query: 418 PKVSHYAKIVDLLGRAGLLDRAMSFIE---GMLIEPTAAIWGALL 459
P + Y ++ RA L ++A+S E M I+P A++ LL
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 173/397 (43%), Gaps = 20/397 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L++L+ +++G +E D +Y ++ + K + + + + + N +R D+ +S+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE--MDNKGIRPDVFTYSSL 281
Query: 119 LFMYARCGDLEHARQVFDEM----PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ G A ++ +M N + VT+ S+I +A+ + ++A LF +M++
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ--R 339
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
PN T +SL+ + + +Q+ +V ++L++ + + + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 235 QAVFDELGR---WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+F ++ R N V++ LI +F +M +G TY+ LL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM--VFKQMVSDGVHPNIMTYNTLL 457
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VK 347
G LE+ + ++ KS + Y N + K+G + D +F L VK
Sbjct: 458 DGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
DV++ N+M+ G+ + G +EA LF +M DG P+ T+ +L+ A G
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
+ MR S Y + D+L G LD+ F+E
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDML-HDGRLDKG--FLE 611
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 165/376 (43%), Gaps = 22/376 (5%)
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFP 167
+V NS+L + + A + D+M DTVT+T+++ G Q+ +A +A+ L
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 168 DMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYAR 227
M+ G +P+ T +++ + K +V + S+++D +
Sbjct: 195 RMVV--KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 228 CGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTE 284
+ +A +F E+ G + ++++LI L + M
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR--LLSDMLERKINPNV 310
Query: 285 FTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKVF 342
T+++L+ + + G L + + L M++ +V Y N+L++ + + +A+++F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY--NSLINGFCMHDRLDEAQQIF 368
Query: 343 DRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
+V DVV+ N+++ G+ + + + LF+ M R G+ N +T+ +L+ A
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM---SFIEGMLIEPTAAIW 455
D + F+ M GV P + Y ++D L + G L++AM +++ +EP +
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 456 GALLGASWMHKKIEMG 471
+ K+E G
Sbjct: 489 NIMSEGMCKAGKVEDG 504
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 46/253 (18%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
+ KM + GYG + T ++LL + + L M++ G + TL+H
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 331 KSGSISDARKVFDRLV----KVDVVSCNSMLIGYAQHG-------------FGK------ 367
+ S+A + +R+V + D+V+ +++ G + G GK
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 368 ----------------EAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLM 411
+A+ LF +M GI P+ T+ SL++ + G + R M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 412 RQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMHKKI 468
+ + P V + ++D + G L A + M+ I+P + +L+ MH ++
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 469 EMGAYAAQKVFEL 481
+ AQ++F L
Sbjct: 362 D----EAQQIFTL 370
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 200/488 (40%), Gaps = 47/488 (9%)
Query: 58 TGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNS 117
+ L L +++ V D LY L++ +L + + S L+ + DLV NS
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR--LKRSGITPDLVAYNS 265
Query: 118 VLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
++ +Y + AR + EM PN TV+++++++ Y +N + ++AL +F +M
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPN--TVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGD---GRQVHGCCW---KHGFCDNVFVGSSLVDMY 225
L C +I YG ++ W K NV ++++ +Y
Sbjct: 324 VNCAL--------DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 226 ARCGFLGEAQAVFDELGR---WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
GEA +F + R +N V++N +I L +MQ G
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN--LVQEMQSRGIEP 433
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
TYS ++ G L++ L + SG ++ + T++ Y + G + A+++
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
L D + + + A+ G +EA +F+Q G E DI+ + L
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESG-EVKDISVFGCMI-----NLYS 547
Query: 403 EGERY------FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA---A 453
+RY F+ MR G P + A +++ G+ ++A + M E
Sbjct: 548 RNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDE 607
Query: 454 IWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGA--HVLLANIYASAGRWKEAANIRKM 511
+ +L K EM Q++ E DP + H+++A +Y A + +A+ +
Sbjct: 608 VHFQMLSLYSSKKDFEMVESLFQRL-ESDPNVNSKELHLVVAALYERADKLNDASRVMNR 666
Query: 512 MKDSGLKK 519
M++ G+ K
Sbjct: 667 MRERGILK 674
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 194/480 (40%), Gaps = 68/480 (14%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLR 171
N VL R + A +FDEM + D T++++IT + + AL M +
Sbjct: 159 NVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQ 218
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
+ S+L++ + Y + + G ++ +S++++Y +
Sbjct: 219 DRVSG--DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 232 GEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
EA+ + E M G +YS LL
Sbjct: 277 REARLLIKE----------------------------------MNEAGVLPNTVSYSTLL 302
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD-- 349
+ + M + L N ++ +Y + + +A ++F L K+D
Sbjct: 303 SVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIE 362
Query: 350 --VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
VVS N++L Y + EA+ LF+ M R IE N +T+ +++ ++
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWM 464
Q M+ G+EP Y+ I+ + G+AG LDRA + + + +E ++ ++ A
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA--- 479
Query: 465 HKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPACS 524
++++ + +A + + EL + I A AGR +EA + + +SG K+
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD---- 535
Query: 525 WVEIENSVHVF--VSNDIAHPQK-DKIIKMWEKLNQEIKEIGYVPDTRHVLLFVDQHEKE 581
+ VF + N + Q+ +I+++EK+ + GY PD+ + + ++ + K+
Sbjct: 536 -------ISVFGCMINLYSRNQRYVNVIEVFEKM----RTAGYFPDSNVIAMVLNAYGKQ 584
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 183/450 (40%), Gaps = 64/450 (14%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR---DDLVIQNSVLFM 121
+++RG +EP Y L+K G R R+ ++F+L+ + ++++ N+++
Sbjct: 321 MVERG-MEPTLITYSILVK-----GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 122 YARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+ G L A ++ D M +K + T+ ++I GY +N +A +A L +ML G
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 178 PNEFTLSSLVKCC-----------------------GLIPSYGDGRQVHGCCWKH----- 209
FT + C GL+ + G HG KH
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG---KHSKALE 491
Query: 210 --------GFCDNVFVGSSLVDMYARCGFLGEAQAVFDE-LGRW--KNEVSWNALIXXXX 258
GF + ++L+ G L EA + E LGR + VS+N LI
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
+M + G +TYS L+C ++ +E+ ++G
Sbjct: 552 GKKKLDEAFM--FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
Y + ++ K+ + ++ FD + V+ + V N ++ Y + G A+ L +
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
M GI PN T+ SL+ S ++E + F+ MR G+EP V HY ++D G+ G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 435 LLDRAMSFIEGM---LIEPTAAIWGALLGA 461
+ + + M + P + ++G
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 204/495 (41%), Gaps = 45/495 (9%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDAL 163
V D+ + + + + + G +E A ++F +M + VT+ ++I G R +A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
+ M+ G P T S LVK GD V K GF NV V ++L+D
Sbjct: 316 MFKEKMVE--RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 224 MYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
+ G L +A + D + G ++N LI L +M G+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI--KGYCKNGQADNAERLLKEMLSIGF 431
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
V + ++++++C S + G ML G + TL+ K G S A +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 341 VFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
++ + + VD + N++L G + G EA + K++L G + +++ +L++ C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 397 HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE-----GMLIEPT 451
LDE + M + G++P Y+ ++ L ++ A+ F + GML P
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--PD 609
Query: 452 AAIWGALLGASWMHKKIEMGAYAAQKVFE------LDPFYSGAHVLLANIYASAGRWKEA 505
+ ++ ++ E G Q+ F+ + P + + L Y +GR A
Sbjct: 610 VYTYSVMIDGCCKAERTEEG----QEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMA 664
Query: 506 ANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYV 565
+R+ MK G+ A ++ + + + I+ ++ K+ L +E++ G
Sbjct: 665 LELREDMKHKGISPNSA-TYTSLIKGMSI-----ISRVEEAKL------LFEEMRMEGLE 712
Query: 566 PDTRHVLLFVDQHEK 580
P+ H +D + K
Sbjct: 713 PNVFHYTALIDGYGK 727
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 21/331 (6%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+ P L L+ K GK + + FL N D N++L G L+
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFL--NKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 131 ARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
A ++ E+ + D V++ ++I+G ++ +A + +M++ G +P+ +T S L
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK--RGLKPDNYTYSIL 581
Query: 187 VKCCGL--IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL--- 241
+ CGL + + Q C ++G +V+ S ++D + E Q FDE+
Sbjct: 582 I--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
N V +N LI L M+ +G TY++L+ S + +E
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALE--LREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVFDRLVKVDVVSCNSML 357
+ K L M G + + L+ Y K G + R++ + V + ++ M+
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
GYA+ G EA L +M GI P+ IT+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 13/205 (6%)
Query: 323 NTLLHMYAKSGSISDARKVFDRLVK---VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
N LL ++ + FD + K DV + + + + G +EAV LF +M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G+ PN +TF +++ G DE + + M + G+EP + Y+ +V L RA + A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 440 MSFIEGML---IEPTAAIWGALLG----ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
++ M P ++ L+ A ++K IE+ K L S + L
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT---SSTYNTL 406
Query: 493 ANIYASAGRWKEAANIRKMMKDSGL 517
Y G+ A + K M G
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGF 431
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 183/450 (40%), Gaps = 64/450 (14%)
Query: 65 LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVR---DDLVIQNSVLFM 121
+++RG +EP Y L+K G R R+ ++F+L+ + ++++ N+++
Sbjct: 321 MVERG-MEPTLITYSILVK-----GLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 122 YARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+ G L A ++ D M +K + T+ ++I GY +N +A +A L +ML G
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 178 PNEFTLSSLVKCC-----------------------GLIPSYGDGRQVHGCCWKH----- 209
FT + C GL+ + G HG KH
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG---KHSKALE 491
Query: 210 --------GFCDNVFVGSSLVDMYARCGFLGEAQAVFDE-LGRW--KNEVSWNALIXXXX 258
GF + ++L+ G L EA + E LGR + VS+N LI
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
+M + G +TYS L+C ++ +E+ ++G
Sbjct: 552 GKKKLDEAFM--FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 319 GYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
Y + ++ K+ + ++ FD + V+ + V N ++ Y + G A+ L +
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
M GI PN T+ SL+ S ++E + F+ MR G+EP V HY ++D G+ G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 435 LLDRAMSFIEGM---LIEPTAAIWGALLGA 461
+ + + M + P + ++G
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 204/495 (41%), Gaps = 45/495 (9%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDAL 163
V D+ + + + + + G +E A ++F +M + VT+ ++I G R +A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
+ M+ G P T S LVK GD V K GF NV V ++L+D
Sbjct: 316 MFKEKMVE--RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 224 MYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
+ G L +A + D + G ++N LI L +M G+
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI--KGYCKNGQADNAERLLKEMLSIGF 431
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
V + ++++++C S + G ML G + TL+ K G S A +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 341 VFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
++ + + VD + N++L G + G EA + K++L G + +++ +L++ C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 397 HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE-----GMLIEPT 451
LDE + M + G++P Y+ ++ L ++ A+ F + GML P
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML--PD 609
Query: 452 AAIWGALLGASWMHKKIEMGAYAAQKVFE------LDPFYSGAHVLLANIYASAGRWKEA 505
+ ++ ++ E G Q+ F+ + P + + L Y +GR A
Sbjct: 610 VYTYSVMIDGCCKAERTEEG----QEFFDEMMSKNVQP-NTVVYNHLIRAYCRSGRLSMA 664
Query: 506 ANIRKMMKDSGLKKEPACSWVEIENSVHVFVSNDIAHPQKDKIIKMWEKLNQEIKEIGYV 565
+R+ MK G+ A ++ + + + I+ ++ K+ L +E++ G
Sbjct: 665 LELREDMKHKGISPNSA-TYTSLIKGMSI-----ISRVEEAKL------LFEEMRMEGLE 712
Query: 566 PDTRHVLLFVDQHEK 580
P+ H +D + K
Sbjct: 713 PNVFHYTALIDGYGK 727
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 21/331 (6%)
Query: 71 VEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEH 130
+ P L L+ K GK + + FL N D N++L G L+
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFL--NKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 131 ARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSL 186
A ++ E+ + D V++ ++I+G ++ +A + +M++ G +P+ +T S L
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK--RGLKPDNYTYSIL 581
Query: 187 VKCCGL--IPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL--- 241
+ CGL + + Q C ++G +V+ S ++D + E Q FDE+
Sbjct: 582 I--CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 242 GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLE 301
N V +N LI L M+ +G TY++L+ S + +E
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALE--LREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 302 QGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVFDRLVKVDVVSCNSML 357
+ K L M G + + L+ Y K G + R++ + V + ++ M+
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 358 IGYAQHGFGKEAVVLFKQMLRDGIEPNDITF 388
GYA+ G EA L +M GI P+ IT+
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 13/205 (6%)
Query: 323 NTLLHMYAKSGSISDARKVFDRLVK---VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRD 379
N LL ++ + FD + K DV + + + + G +EAV LF +M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 380 GIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
G+ PN +TF +++ G DE + + M + G+EP + Y+ +V L RA + A
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 440 MSFIEGML---IEPTAAIWGALLG----ASWMHKKIEMGAYAAQKVFELDPFYSGAHVLL 492
++ M P ++ L+ A ++K IE+ K L S + L
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT---SSTYNTL 406
Query: 493 ANIYASAGRWKEAANIRKMMKDSGL 517
Y G+ A + K M G
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGF 431
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 183/431 (42%), Gaps = 61/431 (14%)
Query: 118 VLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
++ + R G L+ +VFDEMP+ + ++T++I Y +N R +L L D ++
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL-DRMKNE 205
Query: 174 SGSRPNEFTLSSLVKCC--------GLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
S P+ T ++++ C GL+ + + R G ++ ++L+
Sbjct: 206 KIS-PSILTYNTVINACARGGLDWEGLLGLFAEMRH-------EGIQPDIVTYNTLLSAC 257
Query: 226 ARCGFLGEAQAVF---DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
A G EA+ VF ++ G + +++ L+ L +M G
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD--LLGEMASGGSLP 315
Query: 283 TEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVF 342
+Y+ LL + + GS+++ + M +G + LL+++ +SG D R++F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 343 DRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
+ D + N ++ + + G+ KE V LF M+ + IEP+ T+ ++ AC
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTAAIWGAL 458
GL ++ + Q M + P Y +++ G+A L + AL
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE------------------AL 477
Query: 459 LGASWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
+ + MH E+G+ + + F H LL + +A G KE+ I + DSG+
Sbjct: 478 VAFNTMH---EVGSNPSIETF---------HSLLYS-FARGGLVKESEAILSRLVDSGIP 524
Query: 519 KEPACSWVEIE 529
+ +IE
Sbjct: 525 RNRDTFNAQIE 535
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 12/270 (4%)
Query: 271 LFAKMQREGY-GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
LF MQR+ + E Y+ ++ G L++ + M G + L++ Y
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 330 AKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVV-LFKQMLRDGIEPN 384
++G + ++ DR+ + +++ N+++ A+ G E ++ LF +M +GI+P+
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 385 DITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIE 444
+T+ +LL+AC+ GL DE E F+ M G+ P ++ Y+ +V+ G+ L++ +
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 445 GMLIE---PTAAIWGALLGASWMHKKIE--MGAYAAQKVFELDPFYSGAHVLLANIYASA 499
M P + LL A I+ MG + + P + VLL N++ +
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL-NLFGQS 365
Query: 500 GRWKEAANIRKMMKDSGLKKEPACSWVEIE 529
GR+ + + MK S + A + IE
Sbjct: 366 GRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 171/439 (38%), Gaps = 51/439 (11%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R +T L +LD + + P Y ++ C + G EG L+ +++ ++ D+V
Sbjct: 191 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEG-LLGLFAEMRHEGIQPDIVT 249
Query: 115 QNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDML 170
N++L A G + A VF M + D T++ ++ + + R L +M
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 171 RGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGF 230
G GS P+ + + L++ S + V G N S L++++ + G
Sbjct: 310 SG--GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 231 LGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
+ + +F E+ + ++N LI LF M E TY
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILI--EVFGEGGYFKEVVTLFHDMVEENIEPDMETY 425
Query: 288 SALLCSASSVGSLEQGKWLHGHM-----LKSGRKLVGYVG-------------------- 322
++ + G E + + +M + S + G +
Sbjct: 426 EGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Query: 323 ----------NTLLHMYAKSGSISDARKVFDRLVKVDVV----SCNSMLIGYAQHGFGKE 368
++LL+ +A+ G + ++ + RLV + + N+ + Y Q G +E
Sbjct: 486 VGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE 545
Query: 369 AVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD 428
AV + M + +P++ T ++L+ S A L+DE F+ M+ + P + Y ++
Sbjct: 546 AVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLA 605
Query: 429 LLGRAGLLDRAMSFIEGML 447
+ G+ D +E ML
Sbjct: 606 VYGKTERWDDVNELLEEML 624
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 147/370 (39%), Gaps = 31/370 (8%)
Query: 92 REGRLVHSHFLL---QNPDVRDDLVIQNSVLFMYARCG-DLEHARQVFDEMPNK----DT 143
R GR S LL +N + ++ N+V+ AR G D E +F EM ++ D
Sbjct: 188 RNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDI 247
Query: 144 VTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVH 203
VT+ ++++ A +A ++F M GG + L L+ ++G R++
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGG--------IVPDLTTYSHLVETFGKLRRLE 299
Query: 204 GCC------WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALI 254
C G ++ + L++ YA+ G + EA VF ++ G N +++ L+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
LF +M+ TY+ L+ G ++ L M++
Sbjct: 360 NLFGQSGRYDDVRQ--LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIG----YAQHGFGKEAV 370
+ ++ K G DARK+ + D+V + G + Q +EA+
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 371 VLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLL 430
V F M G P+ TF SLL + + GL+ E E + G+ + ++
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAY 537
Query: 431 GRAGLLDRAM 440
+ G + A+
Sbjct: 538 KQGGKFEEAV 547
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 202/514 (39%), Gaps = 60/514 (11%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
+ ++++ +EPD Y L+ K G L G + S L + V+ D+V+ +S
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL--HKGVKLDVVVFSST 362
Query: 119 LFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
+ +Y + GDL A V+ M PN VT+T +I G Q+ R +A ++ +L+
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPN--VVTYTILIKGLCQDGRIYEAFGMYGQILK- 419
Query: 173 GSGSRPNEFTLSSLV----KCCGL------------------IPSYG---DGRQVHGCCW 207
G P+ T SSL+ KC L + YG DG G
Sbjct: 420 -RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 208 K----------HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRW--KNEVSWNALIX 255
NV V +SL+D + R EA VF +G + K +V+ +
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 256 XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR 315
LF +M + G Y L+ + G L M ++
Sbjct: 539 RVSIMEGRLEEALF-LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKI 597
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVV 371
V N ++H+ K I DA K F+ L++ D+V+ N+M+ GY EA
Sbjct: 598 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAER 657
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLG 431
+F+ + PN +T L+ +D R F +M + G +P Y ++D
Sbjct: 658 IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 432 RAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE--LDPFYS 486
++ ++ + E M I P+ + ++ +++ + + L P
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLKKE 520
A+ +L Y GR EAA + + M +G+K +
Sbjct: 778 -AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 11/302 (3%)
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
V D P + VT+ ++I G+ + A LF M + G P+ S+L+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ--RGIEPDLIAYSTLIDGYFKA 334
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSW 250
G G ++ G +V V SS +D+Y + G L A V+ + G N V++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
LI ++ ++ + G + TYS+L+ G+L G L+ M
Sbjct: 395 TILIKGLCQDGRIYEAFG--MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDAR----KVFDRLVKVDVVSCNSMLIGYAQHGFG 366
+K G + L+ +K G + A K+ + ++++VV NS++ G+ +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 367 KEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKI 426
EA+ +F+ M GI+P+ TF +++ G L+E F M + G+EP Y +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 427 VD 428
+D
Sbjct: 573 ID 574
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K G + SG G+V + L + ++ R V +R +V +VSCN +L G +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
+ A L +L G PN +TF +L+ G +D F++M Q G+EP + Y
Sbjct: 266 QI-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 424 AKIVDLLGRAGLL 436
+ ++D +AG+L
Sbjct: 325 STLIDGYFKAGML 337
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 175/423 (41%), Gaps = 51/423 (12%)
Query: 70 AVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLE 129
++PD + + L+K + +LR L+ + + + D +V+ Y GDL+
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLED--MPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 130 HARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
A ++ ++M V+ ++ G+ + R DAL +M G P+++T ++
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM-SNQDGFFPDQYTFNT 300
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR-- 243
LV ++ + G+ +V+ +S++ + G + EA V D++
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 244 -WKNEVSWNALIXXXXXXXXXXXXX---------------------------------XX 269
N V++N LI
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 270 XLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLH 327
LF +M+ +G EFTY+ L+ S S G L++ + M SG R ++ Y NTL+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY--NTLID 478
Query: 328 MYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
+ K+ +A ++FD + V + V+ N+++ G + ++A L QM+ +G +P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
+ T+ SLLT G + + Q M G EP + Y ++ L +AG ++ A +
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 444 EGM 446
+
Sbjct: 599 RSI 601
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 25/381 (6%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
K + ++D++ + +PD Y ++ KLG+++E V + + D + V N
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR--DCSPNTVTYN 369
Query: 117 SVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
+++ + +E A ++ + +K D T+ S+I G A+ LF +M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM--R 427
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
G P+EFT + L+ + + G +V ++L+D + +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 233 EAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSA 289
EA+ +FDE+ G +N V++N LI L +M EG ++TY++
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLI--DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545
Query: 290 LLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL---- 345
LL G +++ + M +G + TL+ K+G + A K+ +
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 346 VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND-----ITFLSLLTACSHAGL 400
+ + + N ++ G + EA+ LF++ML P D I F L C+ G
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL---CNGGGP 662
Query: 401 LDEGERYFQLMRQFGVEPKVS 421
+ E + + + G P+ S
Sbjct: 663 IREAVDFLVELLEKGFVPEFS 683
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/482 (19%), Positives = 184/482 (38%), Gaps = 66/482 (13%)
Query: 60 LHVLD-LIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L V+D +ID ++PD Y R+L L+ + H+ + ++ D+ N +
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG--IKPDVSTFNVL 195
Query: 119 LFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ R L A + ++MP+ D T+T+++ GY + AL + M+
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV---- 251
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK--------HGFCDNVFVGSSLVDMYA 226
EF GC W HGFC V +L
Sbjct: 252 -----EF----------------------GCSWSNVSVNVIVHGFCKEGRVEDAL----- 279
Query: 227 RCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
F+ Q + ++ G + ++ ++N L+ + M +EGY +T
Sbjct: 280 --NFI---QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE--IMDVMLQEGYDPDVYT 332
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVF 342
Y++++ +G +++ + M+ NTL+ K + +A R +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
+ + DV + NS++ G + A+ LF++M G EP++ T+ L+ + G LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 403 EGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALL 459
E + M G V Y ++D +A A + M + + + L+
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 460 GASWMHKKIEMGA-YAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
+++E A Q + E + L + G K+AA+I + M +G +
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 519 KE 520
+
Sbjct: 573 PD 574
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 52 LLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDD 111
L R + + + + + EPD Y L+ + GKL E + L
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--CARS 469
Query: 112 LVIQNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFP 167
++ N+++ + + A ++FDEM ++++VT+ ++I G ++ R DA L
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 168 DMLRGGSGSRPNEFTLSSLV 187
M+ G +P+++T +SL+
Sbjct: 530 QMIM--EGQKPDKYTYNSLL 547
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 149/364 (40%), Gaps = 46/364 (12%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y L++ K GK +G L+ + + ++ +++ N +L ++ + G L+ A +++ E
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMV--SREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 138 MPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
M + + +T+ +++ GY R +A + M+R P+ T +SL+K ++
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS--PDIVTFTSLIKGYCMV 381
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
DG +V K G N S LV + + G + A+ +F E
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE------------- 428
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
M G TY LL G LE+ + + KS
Sbjct: 429 ---------------------MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEA 369
L + T++ K G + DA +F L VK +V++ M+ G + G EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDL 429
+L ++M DG PND T+ +L+ A G L + + M+ G S ++D+
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Query: 430 LGRA 433
L A
Sbjct: 588 LLSA 591
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 196/499 (39%), Gaps = 48/499 (9%)
Query: 95 RLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNKDTVTWTSMITGYA 154
RL+ H LL+ +R DL+ S F + F + N + + +G
Sbjct: 15 RLIQPH-LLKTGSLRTDLLCTISSFF--------SSCERDFSSISNGNVCFRERLRSGIV 65
Query: 155 QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ---VHGCCWK--- 208
++ DA+ LF +M+R SRP L SLV + +Q V C +
Sbjct: 66 DIKKD-DAIALFQEMIR----SRP----LPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL 116
Query: 209 HGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE---LGRWKNEVSWNALIXXXXXXXXXXX 265
+G N++ + +++ + RC A +V + LG + ++N LI
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 266 XXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTL 325
L +M G TY++++ G L M + K + +T+
Sbjct: 177 AVV--LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 326 LHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
+ + G I A +F + +K VV+ NS++ G + G + +L K M+ I
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI 294
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
PN ITF LL G L E ++ M G+ P + Y ++D L A +
Sbjct: 295 VPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
Query: 442 FIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSG-AHVLLANIYA 497
++ M+ P + +L+ M K+++ G + + + + + +L +
Sbjct: 355 MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 498 SAGRWKEAANIRKMMKDSGLKKEPA---------CSWVEIENSVHVFVSNDIAHPQKDKI 548
+G+ K A + + M G+ + C ++E ++ +F D+ + D
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF--EDLQKSKMDLG 472
Query: 549 IKMWEKLNQEIKEIGYVPD 567
I M+ + + + + G V D
Sbjct: 473 IVMYTTIIEGMCKGGKVED 491
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 164/386 (42%), Gaps = 17/386 (4%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
EPD + L+K GK+ E +V +++N + D+V NS++ R GD A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEA-VVLVDRMVEN-GCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 132 RQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
+ +M + D T++++I ++ A+ LF +M G + + T +SLV
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM--ETKGIKSSVVTYNSLV 270
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRW 244
+ + DG + NV + L+D++ + G L EA ++ E+ G
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
N +++N L+ + M R T+++L+ V ++ G
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANN--MLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLIGY 360
+ ++ K G + L+ + +SG I A ++F +V DV++ +L G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
+G ++A+ +F+ + + ++ + + +++ G +++ F + GV+P V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGM 446
Y ++ L + G L A + M
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKM 534
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 196/486 (40%), Gaps = 38/486 (7%)
Query: 55 RSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVI 114
R K + +LD + V+ D Y L+ R R+ + LL+ D+R ++
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLC-----RSNRIAKGYLLLR--DMRKRMIH 335
Query: 115 QNSVLFM-----YARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDAL 163
N V + ++ G + A Q+ +EM PN VT+ ++I G+ +AL
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH--VTFNALIDGHISEGNFKEAL 393
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVD 223
+F M G P+E + L+ + R + ++G C + ++D
Sbjct: 394 KMFYMM--EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 224 MYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
+ GFL EA + +E+ G + V+++ALI + ++ R G
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE--IVCRIYRVGL 509
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
YS L+ + +G L++ ++ M+ G + N L+ K+G +++A +
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 341 VFDRLVKVD-----VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTAC 395
F R + D VS + ++ GY G G +A +F +M + G P T+ SLL
Sbjct: 570 -FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 396 SHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTA 452
G L E E++ + + Y ++ + ++G L +A+S M+ I P +
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 453 AIWGALLGASWMHKKIEMGAYAAQKVFELDPFYSGA--HVLLANIYASAGRWKEAANIRK 510
+ +L+ K + A++ + + AG+WK R+
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748
Query: 511 MMKDSG 516
M + G
Sbjct: 749 QMDNLG 754
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 170/406 (41%), Gaps = 30/406 (7%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPD---VRDDLVIQNSVLFMYARCGDLE 129
PD A + L+ EG S +L+Q + +V N+VL Y + G +
Sbjct: 231 PDVATFNILINVLCA-----EGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 130 HARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSS 185
A ++ D M +K D T+ +I ++ R +L DM + PNE T ++
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK--RMIHPNEVTYNT 343
Query: 186 LVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF---DELG 242
L+ Q+ G N ++L+D + G EA +F + G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 243 RWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQ 302
+EVS+ L+ + +M+R G V TY+ ++ G L++
Sbjct: 404 LTPSEVSYGVLL--DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 303 GKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV----VSCNSM 356
L M K G +V Y + L++ + K G A+++ R+ +V + + +++
Sbjct: 462 AVVLLNEMSKDGIDPDIVTY--SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+ + G KEA+ +++ M+ +G + TF L+T+ AG + E E + + M G+
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI---EPTAAIWGALL 459
P + +++ G +G +A S + M PT +G+LL
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 168/419 (40%), Gaps = 33/419 (7%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFL--LQNPDVRDDLVIQNSVL 119
V D + + P Y LLK K G LRE FL L D V+ N++L
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE----KFLKSLHAVPAAVDTVMYNTLL 660
Query: 120 FMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+ G+L A +F EM + D+ T+TS+I+G + + V A +LF
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA-ILFAKEAEARGN 719
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKH-----GFCDNVFVGSSLVDMYARCGF 230
PN+ + V G+ + G+ G ++ G ++ ++++D Y+R G
Sbjct: 720 VLPNKVMYTCFVD--GMFKA---GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGK 774
Query: 231 LGEAQAVFDELGRWK---NEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTY 287
+ + + E+G N ++N L+ L+ + G + T
Sbjct: 775 IEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL--LYRSIILNGILPDKLTC 832
Query: 288 SALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSIS---DARKVFDR 344
+L+ LE G + + G ++ Y N L+ +G I+ D KV
Sbjct: 833 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 892
Query: 345 L-VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDE 403
L + +D +C++M+ ++ +E+ ++ +M + GI P ++ L+ G +
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 404 GERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA---MSFIEGMLIEPTAAIWGALL 459
+ M + P + +V L + G D A + F+ M + PT A + L+
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 153/349 (43%), Gaps = 19/349 (5%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALV 164
DLV S+L Y +E A +FD++ PN VT+T++I +N A+
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN--VVTYTTLIRCLCKNRHLNHAVE 209
Query: 165 LFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDM 224
LF M G +GSRPN T ++LV I +GD + K NV ++L+D
Sbjct: 210 LFNQM--GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 225 YARCGFLGEAQAVFD---ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYG 281
+ + G L EA+ +++ ++ + + ++ +LI +F M+R G
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ--MFYLMERNGCY 325
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKV 341
E Y+ L+ +E G + M + G L+ Y G A++V
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 342 FD----RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F+ R D+ + N +L G +G ++A+++F+ M + ++ N +T+ ++
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
G +++ F + G++P V Y ++ R GL+ A S + M
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 159/365 (43%), Gaps = 21/365 (5%)
Query: 72 EPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHA 131
EPD + LL ++ + + L + ++V +++ + L HA
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQIL--GMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 132 RQVFDEM----PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLV 187
++F++M + VT+ +++TG + R DA L DM++ PN T ++L+
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK--RRIEPNVITFTALI 265
Query: 188 KCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVF---DELGRW 244
+ + ++++ + +VF SL++ G L EA+ +F + G +
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 245 KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
NEV + LI +F +M ++G TY+ L+ VG + +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMK--IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 305 WLHGHMLKSGRKLVGYVG--NTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLI 358
+ M S R+ + N LL +G + A +F+ + K +++V+ ++
Sbjct: 384 EVFNQM--SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Query: 359 GYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEP 418
G + G ++A LF + G++PN IT+ ++++ GL+ E + F+ M++ G P
Sbjct: 442 GMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Query: 419 KVSHY 423
S Y
Sbjct: 502 NESVY 506
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 144/352 (40%), Gaps = 18/352 (5%)
Query: 139 PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGD 198
P + +T +++ A+ R + LF M G P T + ++ C L
Sbjct: 79 PLPSIIDFTRLLSVIAKMNRYDVVISLFEQM--QILGIPPLLCTCNIVMHCVCLSSQPCR 136
Query: 199 GRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDE---LGRWKNEVSWNALIX 255
G K GF ++ +SL++ Y + +A A+FD+ +G N V++ LI
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIR 196
Query: 256 XXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGR 315
LF +M G TY+AL+ +G WL M+K
Sbjct: 197 CLCKNRHLNHAVE--LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 316 KLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV----DVVSCNSMLIGYAQHGFGKEAVV 371
+ L+ + K G + +A+++++ ++++ DV + S++ G +G EA
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 372 LFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVD--- 428
+F M R+G PN++ + +L+ + +++G + F M Q GV Y ++
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 429 LLGRAGLLDRAMSFIEGMLIEPTAAIWGALLGASWMHKKIEMGAYAAQKVFE 480
L+GR + + + P + LL + K+E A +FE
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE----KALMIFE 422
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 219 SSLVDMYARCGFLGEAQAVFD---ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
++++ Y+R G +A +F+ E+G V++N ++ L +M
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEM 272
Query: 276 QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSI 335
+ +G EFT S +L + + G L + K + G + N LL ++ K+G
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVY 332
Query: 336 SDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
++A V + D V+ N ++ Y + GF KEA + + M + G+ PN IT+ ++
Sbjct: 333 TEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV 392
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---I 448
+ A AG DE + F M++ G P Y ++ LLG+ + + + M
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC 452
Query: 449 EPTAAIWGALLG 460
P A W +L
Sbjct: 453 SPNRATWNTMLA 464
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 140/339 (41%), Gaps = 22/339 (6%)
Query: 121 MYARCGDL---EHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDMLR 171
M A CG+ + +VF EM P++DT + ++I+ Y + VDA ++ +M R
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDT--FNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G + T ++L+ + G V GF S ++ YA+ G
Sbjct: 520 AGFNACVT--TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 232 GEAQAVFDELGRWKNEVSWNAL-IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
+ + + + + SW L F ++ GY ++++
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 291 LCSASSVGSLEQGKWLHGHMLKSG--RKLVGYVGNTLLHMYAKSGSISDARKVFDRL--- 345
L + +Q + + + + G LV Y N+L+ MY + G A ++ L
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTY--NSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 346 -VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
+K D+VS N+++ G+ + G +EAV + +M GI P T+ + ++ + G+ E
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFI 443
E + M + P + +VD RAG AM F+
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 171/410 (41%), Gaps = 39/410 (9%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L VL ++ + D Y L+ + G +E V ++ V + + +V
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE--MMTKKGVMPNAITYTTV 392
Query: 119 LFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ Y + G + A ++F M +T T+ ++++ + R+ + + + DM +
Sbjct: 393 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM--KSN 450
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDG---------RQVHGCCWKHGFCDNVFVGSSLVDMY 225
G PN T ++++ CG G R++ C GF + ++L+ Y
Sbjct: 451 GCSPNRATWNTMLALCG-----NKGMDKFVNRVFREMKSC----GFEPDRDTFNTLISAY 501
Query: 226 ARCGFLGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGV 282
RCG +A ++ E+ R ++NAL+ + + M+ +G+
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN--VISDMKSKGFKP 559
Query: 283 TEFTYSALL-CSASSVGSLEQGKWLHGHMLKSGRKLVGY-VGNTLLHMYAKSGSISDARK 340
TE +YS +L C A L G + +K G+ + + TLL K +++ + +
Sbjct: 560 TETSYSLMLQCYAKGGNYL--GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 341 VFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACS 396
F K D+V NSML + ++ +A + + + DG+ P+ +T+ SL+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 397 HAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
G + E + + + ++P + Y ++ R GL+ A+ + M
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 153/351 (43%), Gaps = 16/351 (4%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDAL 163
V D++ N+++ Y R ++ A V M D T+ S+I+G A+N L
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 164 VLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQV-HGCCWKHGFCDNVFVGSSLV 222
LF +ML SG P+ ++ ++L+ C + +G+ ++ H G + + L+
Sbjct: 104 QLFDEMLH--SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILL 161
Query: 223 DMYARCGFLGEAQAVFDEL-GRWKNEV-SWNALIXXXXXXXXXXXXXXXXLFAKMQREGY 280
D + G A +F L R K E+ ++N LI + ++++ GY
Sbjct: 162 DALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDW--MMRELKKSGY 219
Query: 281 GVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARK 340
TY+ +L +E+G L M K G G+ ++ K+G +A +
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 341 VFDRLVKV-----DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTAC 395
LV+ D+VS N++L Y + G L +++ G++P+D T ++
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 396 SHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
+ G E++ + + G++P V ++D L +AG +DRAM M
Sbjct: 340 LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 205/493 (41%), Gaps = 47/493 (9%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
+ ++++ +EPD Y L+ K G L G + S L + V+ D+V+ +S
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL--HKGVKLDVVVFSST 362
Query: 119 LFMYARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
+ +Y + GDL A V+ M PN VT+T +I G Q+ R +A ++ +L+
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPN--VVTYTILIKGLCQDGRIYEAFGMYGQILK- 419
Query: 173 GSGSRPNEFTLSSLVK--C-CGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCG 229
G P+ T SSL+ C CG + S G ++ K G+ +V + LVD ++ G
Sbjct: 420 -RGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 230 FLGEAQAV-FDELGRW--KNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFT 286
+ A LG+ N V +N+LI +F M G T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK--VFRLMGIYGIKPDVAT 533
Query: 287 YSALLCSASSVGSLEQ----------GKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSIS 336
++ ++ V +E G L M ++ V N ++H+ K I
Sbjct: 534 FTTVM----RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 337 DARKVFDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
DA K F+ L++ D+V+ N+M+ GY EA +F+ + PN +T L+
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IE 449
+D R F +M + G +P Y ++D ++ ++ + E M I
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFE--LDPFYSGAHVLLANIYASAGRWKEAAN 507
P+ + ++ +++ + + L P A+ +L Y GR EAA
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV-AYAILIRGYCKVGRLVEAAL 768
Query: 508 IRKMMKDSGLKKE 520
+ + M +G+K +
Sbjct: 769 LYEHMLRNGVKPD 781
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 119/298 (39%), Gaps = 40/298 (13%)
Query: 134 VFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
V D P + VT+ ++I G+ + A LF M + G P+ S+L+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ--RGIEPDLIAYSTLIDGYFKA 334
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNAL 253
G G ++ G +V V SS +D+Y + G L A V+
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY--------------- 379
Query: 254 IXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKS 313
+M +G TY+ L+ G + + ++G +LK
Sbjct: 380 -------------------KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 314 GRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKV----DVVSCNSMLIGYAQHGFGKEA 369
G + ++L+ + K G++ +++ ++K+ DVV ++ G ++ G A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 370 VVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIV 427
+ +ML I N + F SL+ DE + F+LM +G++P V+ + ++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 304 KWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDVVSCNSMLIGYAQH 363
K G + SG G+V + L + ++ R V +R +V +VSCN +L G +
Sbjct: 206 KLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 364 GFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHY 423
+ A L +L G PN +TF +L+ G +D F++M Q G+EP + Y
Sbjct: 266 QI-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 424 AKIVDLLGRAGLL 436
+ ++D +AG+L
Sbjct: 325 STLIDGYFKAGML 337
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 22/367 (5%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLF 166
DLV V+ + GD++ A + +M V + ++I + DAL LF
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
+M G RPN T +SL++C + D ++ + NV S+L+D +
Sbjct: 280 TEM--DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 227 RCGFLGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+ G L EA+ ++DE+ + + ++++LI +F M +
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH--MFELMISKDCFPN 395
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKV 341
TY+ L+ +++G L M S R LVG TL+H + ++ +A+ V
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 342 FDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F ++V D+++ + +L G +G + A+V+F+ + R +EP+ T+ ++
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAI 454
AG +++G F + GV+P V Y ++ R GL + A + M E P +
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 455 WGALLGA 461
+ L+ A
Sbjct: 574 YNTLIRA 580
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/498 (19%), Positives = 202/498 (40%), Gaps = 64/498 (12%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P + +LL K+ K ++ +QN + +L + ++ + R L A
Sbjct: 79 PSIVEFSKLLSAIAKMNKF--DLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 133 QVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
V +M D VT S++ G+ R DA+ L M+ G +P+ FT ++L+
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE--MGYQPDSFTFNTLIH 194
Query: 189 ----------------------CCGLIPSYGDGRQVHGCCWKHGFCD------------- 213
C + +YG V+G C K G D
Sbjct: 195 GLFRHNRASEAVALVDRMVVKGCQPDLVTYG--IVVNGLC-KRGDIDLALSLLKKMEQGK 251
Query: 214 ---NVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXX 267
V + ++++D + +A +F E+ G N V++N+LI
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 268 XXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLH 327
L + M T+SAL+ + G L + + L+ M+K + ++L++
Sbjct: 312 R--LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 328 MYAKSGSISDARKVFDRLVKVD----VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEP 383
+ + +A+ +F+ ++ D VV+ N+++ G+ + E + LF++M + G+
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 384 NDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM--- 440
N +T+ +L+ A D + F+ M GV P + Y+ ++D L G ++ A+
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 441 SFIEGMLIEPTAAIWGALLGASWMHKKIEMG--AYAAQKVFELDPFYSGAHVLLANIYAS 498
+++ +EP + ++ K+E G + + + + P +++ +
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG-FCR 548
Query: 499 AGRWKEAANIRKMMKDSG 516
G +EA + + MK+ G
Sbjct: 549 KGLKEEADALFREMKEEG 566
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 146/358 (40%), Gaps = 18/358 (5%)
Query: 128 LEHARQVFDEM----PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTL 183
L+ A +F +M P V ++ +++ A+ + D ++ + ++ G N +T
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNK-FDLVISLGEQMQN-LGISHNLYTY 119
Query: 184 SSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFD---E 240
S L+ C V K G+ ++ +SL++ + + +A ++ E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 241 LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSL 300
+G + ++N LI L +M +G TY ++ G +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVA--LVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 301 EQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSM 356
+ L M + + + NT++ +++DA +F + ++ +VV+ NS+
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 357 LIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+ +G +A L M+ I PN +TF +L+ A G L E E+ + M + +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 417 EPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAIWGALLGASWMHKKIEMG 471
+P + Y+ +++ LD A E M+ + P + L+ K+++ G
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 159/349 (45%), Gaps = 19/349 (5%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLF 166
+LV V+ + GD++ A + ++M + V ++++I + DAL LF
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
+M G RPN T SSL+ C + D ++ + NV ++L+D +
Sbjct: 284 TEM--ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 227 RCGFLGEAQAVFDELGRWKNE---VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+ G L EA+ ++DE+ + + ++++LI +F M +
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH--MFELMISKDCFPN 399
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG--YVGNTLLHMYAKSGSISDARKV 341
TY+ L+ +++G L M S R LVG TL+H + ++ +A+ V
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 342 FDRLVK----VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSH 397
F ++V ++++ N++L G ++G ++A+V+F+ + R +EP T+ ++
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 398 AGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
AG +++G F + GV+P V Y ++ R GL + A + M
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 199/485 (41%), Gaps = 73/485 (15%)
Query: 48 DDRNLLRRSKTGLHVLDLIDR----GAVEPDRAL-----YQRLLKTCTKLGKLREGRLVH 98
D R +LR GLH + L D G + R L + +LL K+ K ++
Sbjct: 52 DYREILR---NGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKF--DLVIS 106
Query: 99 SHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYA 154
+Q + +L N ++ + R + A + +M VT +S++ GY
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 155 QNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK----------------------CCGL 192
+R DA+ L M+ G RP+ T ++L+ C
Sbjct: 167 HGKRISDAVALVDQMVE--MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 193 IPSYGDGRQVHGCCWKHGFCD----------------NVFVGSSLVDMYARCGFLGEAQA 236
+ +YG V+G C K G D NV + S+++D + +A
Sbjct: 225 LVTYG--VVVNGLC-KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 237 VFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCS 293
+F E+ G N +++++LI L + M T++AL+ +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASR--LLSDMIERKINPNVVTFNALIDA 339
Query: 294 ASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVD---- 349
G L + + L+ M+K + ++L++ + + +A+ +F+ ++ D
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 399
Query: 350 VVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQ 409
VV+ N+++ G+ + E V LF++M + G+ N +T+ +L+ A D + F+
Sbjct: 400 VVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 410 LMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM---SFIEGMLIEPTAAIWGALLGASWMHK 466
M GV P + Y ++D L + G L++AM +++ +EPT + ++
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Query: 467 KIEMG 471
K+E G
Sbjct: 520 KVEDG 524
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 148/340 (43%), Gaps = 17/340 (5%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
++L+ ++ +E + +Y ++ + K E ++ ++N VR +++ +S+
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYR--HEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 119 ---LFMYARCGDLEHA-RQVFDEMPNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
L Y R D + + N + VT+ ++I + + + V+A L+ +M++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK--R 359
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
P+ FT SSL+ + + + + NV ++L++ + + + E
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 235 QAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+F E+ G N V++ LI +F +M +G TY+ LL
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM--VFKQMVSDGVHPNIMTYNTLL 477
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VK 347
G LE+ + ++ +S + Y N ++ K+G + D +F L VK
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDIT 387
DV+ N+M+ G+ + G +EA LF++M DG P+ T
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 15/327 (4%)
Query: 103 LQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNER 158
++ + ++VI ++V+ + + A +F EM NK + +T++S+I+ ER
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 159 AVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG 218
DA L DM+ PN T ++L+ + +++ K ++F
Sbjct: 311 WSDASRLLSDMIE--RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 219 SSLVDMYARCGFLGEAQAVFDELGR---WKNEVSWNALIXXXXXXXXXXXXXXXXLFAKM 275
SSL++ + L EA+ +F+ + + N V++N LI LF +M
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE--LFREM 426
Query: 276 QREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSI 335
+ G TY+ L+ + + + M+ G NTLL K+G +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 336 SDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
A VF+ L ++ + + N M+ G + G ++ LF + G++P+ I + ++
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEP 418
++ GL +E + F+ MR+ G P
Sbjct: 547 ISGFCRKGLKEEADALFRKMREDGPLP 573
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 139/344 (40%), Gaps = 15/344 (4%)
Query: 116 NSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLR 171
N++L Y + G L+ A + EM + D T++ +I Y R A ++ +M
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 172 GGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G +PN F S L+ + QV G + + ++D + + L
Sbjct: 403 GDV--QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL 460
Query: 232 GEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
A FD + G + V+WN LI +F M+R G TY+
Sbjct: 461 DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE--MFEAMERRGCLPCATTYN 518
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL--- 345
++ S + K L G M G TL+ +Y KSG +DA + + +
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSV 578
Query: 346 -VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG 404
+K N+++ YAQ G ++AV F+ M DG++P+ + SL+ A E
Sbjct: 579 GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEA 638
Query: 405 ERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLI 448
Q M++ GV+P V Y ++ L R + E M++
Sbjct: 639 FAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 111/265 (41%), Gaps = 28/265 (10%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
L Q G T +++ + + G + + L + +SG K N LL Y
Sbjct: 291 LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYV 350
Query: 331 KSGSISDARKVFDRLVKVDVVS---CNSMLI-GYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K+G + DA + + K V S+LI Y G + A ++ K+M ++PN
Sbjct: 351 KTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSF 410
Query: 387 TFLSLLTACSHAGLLDEGE--RYFQL---MRQFGVEPKVSHYAKIVDLLGRAGLLDRAMS 441
F LL AG D GE + FQ+ M+ GV+P Y ++D G+ LD AM+
Sbjct: 411 VFSRLL-----AGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 442 FIEGML---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELD------PFYSGAHVLL 492
+ ML IEP W L+ H + A+++FE P + ++++
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGR----HIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 493 ANIYASAGRWKEAANIRKMMKDSGL 517
N Y RW + + MK G+
Sbjct: 522 -NSYGDQERWDDMKRLLGKMKSQGI 545
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/473 (19%), Positives = 182/473 (38%), Gaps = 81/473 (17%)
Query: 57 KTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQN 116
+ L+++ + + + D Y ++++ T+ K+ L+ + ++ + D+ + N
Sbjct: 214 EKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVN 273
Query: 117 SVLFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRG 172
++ +A+ GD A Q+ + T T S+I+ A + R ++A LF ++ +
Sbjct: 274 DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ- 332
Query: 173 GSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLG 232
SG +P ++L+K D + K G + S L+D Y G
Sbjct: 333 -SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG--- 388
Query: 233 EAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLC 292
RW++ + +M+ F +S LL
Sbjct: 389 ----------RWES---------------------ARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 293 SASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKV 348
G ++ + M G K N ++ + K + A FDR+ ++
Sbjct: 418 GFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYF 408
D V+ N+++ + +HG A +F+ M R G P T+ ++ + D+ +R
Sbjct: 478 DRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 409 QLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWMH 465
M+ G+ P V + +VD+ G++G + A+ +E M ++P++ ++ AL+
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI------ 591
Query: 466 KKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
N YA G ++A N ++M GLK
Sbjct: 592 ----------------------------NAYAQRGLSEQAVNAFRVMTSDGLK 616
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 137/331 (41%), Gaps = 46/331 (13%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
VL ++ G V+P+ ++ RLL G+ ++ V +++ V+ D N V+
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE--MKSIGVKPDRQFYNVVIDT 453
Query: 122 YARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSR 177
+ + L+HA FD M ++ D VTW ++I + ++ R + A +F M R G
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER--RGCL 511
Query: 178 PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAV 237
P T + ++ G + D +++ G G NV ++LVD+Y + G +A
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 238 FDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSV 297
+E M+ G + Y+AL+ + +
Sbjct: 572 LEE----------------------------------MKSVGLKPSSTMYNALINAYAQR 597
Query: 298 GSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSC 353
G EQ M G K N+L++ + + ++A V + VK DVV+
Sbjct: 598 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 354 NSMLIGYAQHGFGKEAVVLFKQMLRDGIEPN 384
+++ + ++ V++++M+ G +P+
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 111/255 (43%), Gaps = 22/255 (8%)
Query: 282 VTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK--LVGYVGNTLLHMYAKSGSISDA- 338
+T TY+AL+ + + +E+ L M + G + V Y + ++ +S I
Sbjct: 195 LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNY--SLVIQSLTRSNKIDSVM 252
Query: 339 -----RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
+++ +++DV N +++G+A+ G +A+ L G+ T +S+++
Sbjct: 253 LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEP 450
A + +G E E F+ +RQ G++P+ Y ++ + G L A S + M + P
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 451 TAAIWGALLGA-----SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEA 505
+ L+ A W +I + A V +S LLA + G W++
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSR---LLAG-FRDRGEWQKT 428
Query: 506 ANIRKMMKDSGLKKE 520
+ K MK G+K +
Sbjct: 429 FQVLKEMKSIGVKPD 443
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 167/392 (42%), Gaps = 18/392 (4%)
Query: 59 GLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSV 118
L +L +++G +E D +Y ++ K + + + + + N +R D+ +S+
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE--MDNKGIRPDVFTYSSL 299
Query: 119 LFMYARCGDLEHARQVFDEMP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGS 174
+ G A ++ +M N + VT++++I + + + V+A L+ +M++
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--R 357
Query: 175 GSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEA 234
P+ FT SSL+ + + + + NV S+L+ + + + E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 235 QAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALL 291
+F E+ G N V++ LI +F +M G TY+ LL
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM--VFKQMVSVGVHPNILTYNILL 475
Query: 292 CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VK 347
G L + + ++ +S + Y N ++ K+G + D ++F L V
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 348 VDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERY 407
+V++ N+M+ G+ + G +EA L K+M DG PN T+ +L+ A G +
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAEL 595
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ MR G S + ++L G LD++
Sbjct: 596 IKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/495 (20%), Positives = 198/495 (40%), Gaps = 58/495 (11%)
Query: 73 PDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHAR 132
P + +LL K+ K ++ +Q + DL + + + R L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 133 QVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVK 188
V +M D VT +S++ GY ++R DA+ L M+ G +P+ FT ++L+
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE--MGYKPDTFTFTTLIH 196
Query: 189 CCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGRWKNE- 247
L + + + G ++ ++V+ + G + A ++ ++ + K E
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 248 --VSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKW 305
V +N +I LF +M +G FTYS+L+ + G
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALN--LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 306 LHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLIGYA 361
L M++ + L+ + K G + +A K++D ++K D+ + +S++ G+
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 362 QH------------------------------GFGK-----EAVVLFKQMLRDGIEPNDI 386
H GF K E + LF++M + G+ N +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM---SFI 443
T+ +L+ A D + F+ M GV P + Y ++D L + G L +AM ++
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 444 EGMLIEPTAAIWGALLGASWMHKKIEMG--AYAAQKVFELDPFYSGAHVLLANIYASAGR 501
+ +EP + ++ K+E G + + + P + +++ + G
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG-FCRKGS 553
Query: 502 WKEAANIRKMMKDSG 516
+EA ++ K MK+ G
Sbjct: 554 KEEADSLLKKMKEDG 568
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 157/374 (41%), Gaps = 27/374 (7%)
Query: 161 DALVLFPDMLRGGSGSRPNEFT--LSSLVKCCG--LIPSYGDGRQVHGCCWKHGFCDNVF 216
DA+ LF DM++ EF LS++ K L+ S G+ Q G +++
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG------ISHDLY 119
Query: 217 VGSSLVDMYARCGFLGEAQAVFDE---LGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFA 273
S ++ + R L A AV + LG + V+ ++L+ L
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA--LVD 177
Query: 274 KMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRK--LVGYVGNTLLHMYAK 331
+M GY FT++ L+ + L M++ G + LV Y T+++ K
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY--GTVVNGLCK 235
Query: 332 SGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDIT 387
G I A + ++ ++ DVV N+++ G ++ +A+ LF +M GI P+ T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 388 FLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML 447
+ SL++ + G + R M + + P V ++ ++D + G L A + M+
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 448 ---IEPTAAIWGALLGASWMHKKIEMGAYAAQKVFELDPFYS-GAHVLLANIYASAGRWK 503
I+P + +L+ MH +++ + + + D F + + L + A R +
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 504 EAANIRKMMKDSGL 517
E + + M GL
Sbjct: 416 EGMELFREMSQRGL 429
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 170/422 (40%), Gaps = 44/422 (10%)
Query: 52 LLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLRE-----GRLVHSHFLLQNP 106
LL +S+ +++ R +E R Q LGK R+ G L L P
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 107 DVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDA 162
+V + + + R G + A ++ M ++ D VT+T +I + A
Sbjct: 257 NVYTFTI----CIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 163 LVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGC--CW----KHGFCDNVF 216
+F M G +P+ T +L + + D R + W K G +V
Sbjct: 313 KEVFEKMKTGRH--KPDRVTYITL------LDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 217 VGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFA 273
+ LVD + G GEA D + G N ++N LI LF
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE--LFG 422
Query: 274 KMQREGYGVTEFTYSALL----CSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMY 329
M+ G T +TY + S SV +LE + M G N L+
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE----KMKTKGIAPNIVACNASLYSL 478
Query: 330 AKSGSISDARKVFDRLVKV----DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPND 385
AK+G +A+++F L + D V+ N M+ Y++ G EA+ L +M+ +G EP+
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 386 ITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEG 445
I SL+ A +DE + F M++ ++P V Y ++ LG+ G + A+ EG
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 446 ML 447
M+
Sbjct: 599 MV 600
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 179/418 (42%), Gaps = 31/418 (7%)
Query: 61 HVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLF 120
+L +D PD Y L+ KL + V ++ + D V ++L
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK--MKTGRHKPDRVTYITLLD 336
Query: 121 MYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNE---RAVDALVLFPDMLRGG 173
++ DL+ +Q + EM D VT+T ++ + A D L D++R
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL----DVMRD- 391
Query: 174 SGSRPNEFTLSSLVKCCGLIPSY--GDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFL 231
G PN T ++L+ CGL+ + D ++ G G + +D Y + G
Sbjct: 392 QGILPNLHTYNTLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 232 GEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYS 288
A F+++ G N V+ NA + +F ++ G TY+
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ--IFYGLKDIGLVPDSVTYN 507
Query: 289 ALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL--- 345
++ S VG +++ L M+++G + V N+L++ K+ + +A K+F R+
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 346 -VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTA-CSHAGLLDE 403
+K VV+ N++L G ++G +EA+ LF+ M++ G PN ITF +L C + +
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 404 GERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM--LIEPTAAIWGALL 459
+ F++M G P V Y I+ L + G + AM F M L+ P LL
Sbjct: 628 LKMLFKMM-DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 135/328 (41%), Gaps = 50/328 (15%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDALVLF 166
D+ N +L Y + G ++ +++ EM +T+T +I+G + DAL L+
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 167 PDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYA 226
D++ +F+ ++ +YG L+D +
Sbjct: 879 YDLMSD------RDFSPTAC--------TYG----------------------PLIDGLS 902
Query: 227 RCGFLGEAQAVFD---ELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVT 283
+ G L EA+ +F+ + G N +N LI LF +M +EG
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA--LFKRMVKEGVRPD 960
Query: 284 EFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD 343
TYS L+ VG +++G + +SG N +++ KS + +A +F+
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 344 RL-----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHA 398
+ + D+ + NS+++ G +EA ++ ++ R G+EPN TF +L+ S +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 399 GLLDEGERYFQLMRQFGVEPKVSHYAKI 426
G + +Q M G P Y ++
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 325 LLHMYAKSGSISDARKVFDRLV----KVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDG 380
L+ +KSG + +A+++F+ ++ + + N ++ G+ + G A LFK+M+++G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 381 IEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAM 440
+ P+ T+ L+ G +DEG YF+ +++ G+ P V Y I++ LG++ L+ A+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 441 SFIEGM 446
M
Sbjct: 1017 VLFNEM 1022
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 349 DVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEG-ERY 407
DV + N +L Y + G E L+K+M E N IT +++ AG +D+ + Y
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 408 FQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGASWM 464
+ LM P Y ++D L ++G L A EGML P AI+ L+
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 465 HKKIEMGAYAAQKVFE--LDPFYSGAHVLLANIYASAGRWKEAANIRKMMKDSGLKKEPA 522
+ + +++ + + P + +L + GR E + K +K+SGL +
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLK-TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 523 C 523
C
Sbjct: 998 C 998
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 157/375 (41%), Gaps = 56/375 (14%)
Query: 108 VRDDLVIQNSVLF-----MYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQNER 158
++ D V+ N V + + + G + A ++FDEM + D +TS+I+ +
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 159 AVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVG 218
A +LF ++ G P+ +T +L+ + G + G V
Sbjct: 345 MKRAFLLFDELTE--KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 219 SSLVDMYARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
++L+D Y R G + EA ++D M+++
Sbjct: 403 NTLIDGYCRKGMVDEASMIYD----------------------------------VMEQK 428
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGK-WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISD 337
G+ FT + + + + ++ K WL M++ G KL L+ +Y K G++ +
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLF-RMMEGGVKLSTVSYTNLIDVYCKEGNVEE 487
Query: 338 ARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLT 393
A+++F + V+ + ++ N M+ Y + G KEA L M +G++P+ T+ SL+
Sbjct: 488 AKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH 547
Query: 394 ACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIEPTA- 452
A +DE R F M G++ Y ++ L +AG D A + M +
Sbjct: 548 GECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 453 --AIWGALLGASWMH 465
++ AL+G+ MH
Sbjct: 608 DNKVYTALIGS--MH 620
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 55/264 (20%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
+F +M G +T ++ + ++ G +E+ K L G K Y NT+++ Y
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 331 KSGSISDARKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLS 390
K S G E V+ K M +DG+ N +T+
Sbjct: 271 KQRDFS-----------------------------GVEGVL--KVMKKDGVVYNKVTYTL 299
Query: 391 LLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML--- 447
L+ G + + E+ F MR+ G+E V Y ++ R G + RA + +
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 448 IEPTAAIWGAL---------LGAS--WMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIY 496
+ P++ +GAL +GA+ M++ G Q VF L + Y
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN----------TLIDGY 409
Query: 497 ASAGRWKEAANIRKMMKDSGLKKE 520
G EA+ I +M+ G + +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQAD 433
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 162/396 (40%), Gaps = 37/396 (9%)
Query: 62 VLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFM 121
+ ++I +G + PD + Y ++L K+ L+ ++ + D+ ++
Sbjct: 471 IREMIGQGFI-PDTSTYSKVLNYLCNASKMELAFLLFEE--MKRGGLVADVYTYTIMVDS 527
Query: 122 YARCGDLEHARQVFDEM------PNKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSG 175
+ + G +E AR+ F+EM PN VT+T++I Y + ++ A LF ML G
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPN--VVTYTALIHAYLKAKKVSYANELFETML--SEG 583
Query: 176 SRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWK-HGFCDNVFVGSSLVDMYARCGFLGEA 234
PN T S+L I + QV C C + V VDMY +
Sbjct: 584 CLPNIVTYSAL------IDGHCKAGQVEKACQIFERMCGSKDVPD--VDMYFK------- 628
Query: 235 QAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSA 294
+D+ N V++ AL+ L M EG + Y AL+
Sbjct: 629 --QYDDNSERPNVVTYGALLDGFCKSHRVEEARK--LLDAMSMEGCEPNQIVYDALIDGL 684
Query: 295 SSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK----VDV 350
VG L++ + + M + G Y ++L+ Y K A KV ++++ +V
Sbjct: 685 CKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNV 744
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQL 410
V M+ G + G EA L + M G +PN +T+ +++ G ++ +
Sbjct: 745 VIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 411 MRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
M GV P Y ++D + G LD A + +E M
Sbjct: 805 MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 141/397 (35%), Gaps = 103/397 (25%)
Query: 122 YARC----GDLEHARQVFDEMPNK----DTVTWTSMITGYAQNERAVDALVLFPDMLRGG 173
+ RC G E A V EM + DT T++ ++ + A +LF +M RGG
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 174 SGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGE 233
+V+ + +VD + + G + +
Sbjct: 514 -------------------------------------LVADVYTYTIMVDSFCKAGLIEQ 536
Query: 234 AQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSAL 290
A+ F+E+ G N V++ ALI LF M EG TYSAL
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE--LFETMLSEGCLPNIVTYSAL 594
Query: 291 LCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVKVDV 350
+ G +E+ + M G K V V MY K + R +V
Sbjct: 595 IDGHCKAGQVEKACQIFERM--CGSKDVPDVD-----MYFKQYDDNSERP--------NV 639
Query: 351 VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGE----- 405
V+ ++L G+ + +EA L M +G EPN I + +L+ G LDE +
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 406 ------------------RYFQLMRQ------------FGVEPKVSHYAKIVDLLGRAGL 435
RYF++ RQ P V Y +++D L + G
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 436 LDRA---MSFIEGMLIEPTAAIWGALLGASWMHKKIE 469
D A M +E +P + A++ M KIE
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 174/446 (39%), Gaps = 36/446 (8%)
Query: 30 ISDDNDNVPELDKSYYIIDDR-------NLLRRS--KTGLHVLDLIDRGAVE-----PDR 75
+ DD++ VPE DD+ N+L R + G + L + G ++ P R
Sbjct: 176 VRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSR 235
Query: 76 ALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVF 135
+ Y L++ K +L L+H L N +R D + + G A +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLAN--LRMDGFTLRCFAYSLCKVGKWREALTLV 293
Query: 136 D-EMPNKDTVTWTSMITGYAQN---ERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCG 191
+ E DTV +T +I+G + E A+D F + +R S PN T S+L+ C
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMD----FLNRMRATS-CLPNVVTYSTLLCGCL 348
Query: 192 LIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEV 248
G ++V G + + +SLV Y G A + ++ G V
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 249 SWNALIXXXXXXXXXXXXXXXXL----FAKMQREGYGVTEFTYSALLCSASSVGSLEQGK 304
+N LI L +++M G + + S+ S G E+
Sbjct: 409 VYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAF 468
Query: 305 WLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRLVK----VDVVSCNSMLIGY 360
+ M+ G + +L+ + + A +F+ + + DV + M+ +
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
+ G ++A F +M G PN +T+ +L+ A A + F+ M G P +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGM 446
Y+ ++D +AG +++A E M
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERM 614
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 173/395 (43%), Gaps = 24/395 (6%)
Query: 38 PELDKSYYIIDDRNLLRRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLV 97
P++ +I+ L R + + +++ + ++PD +Y ++ + K G + +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 98 HSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGY 153
++N +R D+V+ S++ G A + M + D +T+ ++I +
Sbjct: 200 FDQ--MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 154 AQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCD 213
+ + +DA L+ +M+R PN FT +SL+ + + RQ+ G
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIA--PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 214 NVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXXXXXXXXXXXXXX 270
+V +SL++ + +C + +A +F E+ G N +++ LI
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE-- 373
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVG-----YVGNTL 325
+F+ M G TY+ LL G +++ + M K R++ G + N L
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK--REMDGVAPNIWTYNVL 431
Query: 326 LHMYAKSGSISDARKVFDRLVKVDV----VSCNSMLIGYAQHGFGKEAVVLFKQMLRDGI 381
LH +G + A VF+ + K ++ ++ ++ G + G K AV LF + G+
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 382 EPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGV 416
+PN +T+ ++++ GL E F+ M++ GV
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 22/348 (6%)
Query: 108 VRDDLVIQNSVLFMYARCGDLEHARQVFDEMPN----KDTVTWTSMITGYAQNERAVDAL 163
++ D+V+ +++ + G + +A +FD+M N D V +TS++ G + R DA
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA- 231
Query: 164 VLFPDMLRGGSGSR--PNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSL 221
+LRG + + P+ T ++L+ + D +++ + N+F +SL
Sbjct: 232 ---DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 222 VDMYARCGFLGEAQAVF---DELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQRE 278
++ + G + EA+ +F + G + + V++ +LI +F +M ++
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK--IFYEMSQK 346
Query: 279 GYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA 338
G TY+ L+ VG + + HM+ G N LLH +G + A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 339 RKVFDRL-------VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSL 391
+F+ + V ++ + N +L G +G ++A+++F+ M + ++ IT+ +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 392 LTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRA 439
+ AG + F + GV+P V Y ++ L R GL A
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 287 YSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDA----RKVF 342
Y+ ++ S G + L M G + + +L++ SG DA R +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 343 DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLD 402
R +K DV++ N+++ + + G +A L+ +M+R I PN T+ SL+ G +D
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 403 EGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
E + F LM G P V Y +++ + +D AM M
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
Query: 271 LFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYA 330
KM + G+ T+++L+ +E+ + M++ G K + T++
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 331 KSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDI 386
K+G ++ A +FD++ ++ DVV S++ G G ++A L + M + I+P+ I
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 387 TFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGM 446
TF +L+ A G + E + M + + P + Y +++ G +D A M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 447 LIE---PTAAIWGALLGASWMHKKIEMGAYAAQKVF 479
+ P + +L+ KK++ A K+F
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVD----DAMKIF 340
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/392 (18%), Positives = 159/392 (40%), Gaps = 20/392 (5%)
Query: 142 DTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQ 201
D T ++ + Q+ + A M++ G P+ T +SL+ L +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMK--LGFEPDIVTFTSLINGFCLGNRMEEAMS 163
Query: 202 VHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALIXXXX 258
+ + G +V + ++++D + G + A ++FD++ G + V + +L+
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 259 XXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSGRKLV 318
L M + T++AL+ + G + L+ M++
Sbjct: 224 NSGRWRDADS--LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 319 GYVGNTLLHMYAKSGSISDARKVF----DRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFK 374
+ +L++ + G + +AR++F + DVV+ S++ G+ + +A+ +F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 375 QMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAG 434
+M + G+ N IT+ +L+ G + + F M GV P + Y ++ L G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 435 LLDRAMSFIEGML------IEPTAAIWGALLGASWMHKKIE--MGAYAAQKVFELDPFYS 486
+ +A+ E M + P + LL + K+E + + + E+D
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 487 GAHVLLANIYASAGRWKEAANIRKMMKDSGLK 518
+++ + AG+ K A N+ + G+K
Sbjct: 462 TYTIIIQGM-CKAGKVKNAVNLFCSLPSKGVK 492
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 306 LHGHMLKSGRKLVGYVGNT-LLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGY 360
L HM++S R L + T LL++ AK + D L V D+ +CN ++ +
Sbjct: 59 LFTHMVES-RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF 117
Query: 361 AQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLLDEGERYFQLMRQFGVEPKV 420
Q A +M++ G EP+ +TF SL+ ++E M + G++P V
Sbjct: 118 CQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 421 SHYAKIVDLLGRAGLLDRAMSFIEGML---IEPTAAIWGALLGA 461
Y I+D L + G ++ A+S + M I P ++ +L+
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 45/312 (14%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN-----KDTVTWTSMITGYAQNERAVDALVL 165
D+V N+++ + + +L A ++F ++ + D VT+TSMI+GY + + +A L
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
DMLR G P T + LV ++ G G +V +SL+D Y
Sbjct: 300 LDDMLR--LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
R G + + +++E M G F
Sbjct: 358 CRVGQVSQGFRLWEE----------------------------------MNARGMFPNAF 383
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
TYS L+ + + L + + L G + ++ N ++ + K+G +++A + + +
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 346 ----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
K D ++ ++IG+ G EAV +F +M+ G P+ IT SLL+ AG+
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 402 DEGERYFQLMRQ 413
E Q+ R+
Sbjct: 504 KEAYHLNQIARK 515
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 15/247 (6%)
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD-- 343
T++ L+ VG E+ L G M G + NTL+ + KS ++ A ++F
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 344 ---RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+ DVV+ SM+ GY + G +EA L MLR GI P ++TF L+ + AG
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAIWGA 457
+ E M FG P V + ++D R G + + E M P A +
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 458 LLGA----SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMK 513
L+ A + + K E+ A K PF + + + AG+ EA I + M+
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI---DGFCKAGKVNEANVIVEEME 444
Query: 514 DSGLKKE 520
K +
Sbjct: 445 KKKCKPD 451
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 45/312 (14%)
Query: 111 DLVIQNSVLFMYARCGDLEHARQVFDEMPN-----KDTVTWTSMITGYAQNERAVDALVL 165
D+V N+++ + + +L A ++F ++ + D VT+TSMI+GY + + +A L
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 166 FPDMLRGGSGSRPNEFTLSSLVKCCGLIPSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMY 225
DMLR G P T + LV ++ G G +V +SL+D Y
Sbjct: 300 LDDMLR--LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 226 ARCGFLGEAQAVFDELGRWKNEVSWNALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEF 285
R G + + +++E M G F
Sbjct: 358 CRVGQVSQGFRLWEE----------------------------------MNARGMFPNAF 383
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFDRL 345
TYS L+ + + L + + L G + ++ N ++ + K+G +++A + + +
Sbjct: 384 TYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Query: 346 ----VKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGLL 401
K D ++ ++IG+ G EAV +F +M+ G P+ IT SLL+ AG+
Sbjct: 444 EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA 503
Query: 402 DEGERYFQLMRQ 413
E Q+ R+
Sbjct: 504 KEAYHLNQIARK 515
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 15/247 (6%)
Query: 286 TYSALLCSASSVGSLEQGKWLHGHMLKSGRKLVGYVGNTLLHMYAKSGSISDARKVFD-- 343
T++ L+ VG E+ L G M G + NTL+ + KS ++ A ++F
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 344 ---RLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLLTACSHAGL 400
+ DVV+ SM+ GY + G +EA L MLR GI P ++TF L+ + AG
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 401 LDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE---PTAAIWGA 457
+ E M FG P V + ++D R G + + E M P A +
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 458 LLGA----SWMHKKIEMGAYAAQKVFELDPFYSGAHVLLANIYASAGRWKEAANIRKMMK 513
L+ A + + K E+ A K PF + + + AG+ EA I + M+
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI---DGFCKAGKVNEANVIVEEME 444
Query: 514 DSGLKKE 520
K +
Sbjct: 445 KKKCKPD 451
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 185/493 (37%), Gaps = 92/493 (18%)
Query: 78 YQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLVIQNSVLFMYARCGDLEHARQVFDE 137
Y LL + + G + E + V+ L V ++ N ++ Y + G++E A Q +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEML--EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 138 MP----NKDTVTWTSMITGYAQNERAVDALVLFPDMLRGGSGSRPNEFTLSSLVKCCGLI 193
+ + D T+TS+I GY Q + A +F +M G R NE + L+
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM--PLKGCRRNEVAYTHLI------ 295
Query: 194 PSYGDGRQVHGCCWKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDELGR---WKNEVSW 250
HG C AR + EA +F ++ + ++
Sbjct: 296 ---------------HGLC------------VAR--RIDEAMDLFVKMKDDECFPTVRTY 326
Query: 251 NALIXXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHM 310
LI L +M+ G TY+ L+ S S E+ + L G M
Sbjct: 327 TVLIKSLCGSERKSEALN--LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 311 LKSGRKLVGYVGNTLLHMYAKSGSISDA-------------------------------- 338
L+ G N L++ Y K G I DA
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 339 ------RKVFDRLVKVDVVSCNSMLIGYAQHGFGKEAVVLFKQMLRDGIEPNDITFLSLL 392
K+ +R V DVV+ NS++ G + G A L M G+ P+ T+ S++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 393 TACSHAGLLDEGERYFQLMRQFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGMLIE--- 449
+ + ++E F + Q GV P V Y ++D +AG +D A +E ML +
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 450 PTAAIWGALLGASWMHKKIEMGAYAAQKVFE--LDPFYSGAHVLLANIYASAGRWKEAAN 507
P + + AL+ K++ +K+ + L P S +L+ + G + A +
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD-GDFDHAYS 623
Query: 508 IRKMMKDSGLKKE 520
+ M SG K +
Sbjct: 624 RFQQMLSSGTKPD 636
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/527 (21%), Positives = 204/527 (38%), Gaps = 71/527 (13%)
Query: 54 RRSKTGLHVLDLIDRGAVEPDRALYQRLLKTCTKLGKLREGRLVHSHFLLQNPDVRDDLV 113
R L+++ ++ ++P+ Y L+ + K + R + L + + +++
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG--LMPNVI 394
Query: 114 IQNSVLFMYARCGDLEHARQVFDEMPNK----DTVTWTSMITGYAQN------------- 156
N+++ Y + G +E A V + M ++ +T T+ +I GY ++
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Query: 157 ERAVDALVLFPDMLRGG---SGSRPNEFTLSSLVKCCGLIP----------SYGDGRQVH 203
ER V V+ + L G SG+ + + L SL+ GL+P S ++V
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 204 GCC------WKHGFCDNVFVGSSLVDMYARCGFLGEAQAVFDEL---GRWKNEVSWNALI 254
C + G NV + ++L+D Y + G + EA + +++ N +++NALI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 255 XXXXXXXXXXXXXXXXLFAKMQREGYGVTEFTYSALLCSASSVGSLEQGKWLHGHMLKSG 314
L KM + G T T + L+ G + ML SG
Sbjct: 575 HGLCADGKLKEATL--LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 315 RKLVGYVGNTLLHMYAKSGSISDARKVFDRL----VKVDVVSCNSMLIGYAQHGFGKEAV 370
K + T + Y + G + DA + ++ V D+ + +S++ GY G A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 371 VLFKQMLRDGIEPNDITFLSL------------------LTACSHAGLLDEGERYFQLMR 412
+ K+M G EP+ TFLSL L A S+ D + M
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 413 QFGVEPKVSHYAKIVDLLGRAGLLDRAMSFIEGML----IEPTAAIWGALLGASWMHKKI 468
+ V P Y K++ + G L A + M I P+ ++ ALL KK
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 469 EMGAYAAQKVFELD--PFYSGAHVLLANIYASAGRWKEAANIRKMMK 513
A + + P VL+ +Y + + + + +++
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859