Miyakogusa Predicted Gene

Lj3g3v0537470.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537470.1 Non Chatacterized Hit- tr|Q23TE6|Q23TE6_TETTS
Putative uncharacterized protein OS=Tetrahymena
thermo,27.82,5e-18,IMMUNOGLOBULIN-BINDING PROTEIN 1,NULL;
IMMUNOGLOBULIN-BINDING PROTEIN 1,TAP42-like protein;
TAP42,TA,CUFF.40953.1
         (405 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G53000.1 | Symbols: TAP46 | 2A phosphatase associated protein...   492   e-139

>AT5G53000.1 | Symbols: TAP46 | 2A phosphatase associated protein of
           46 kD | chr5:21485654-21487869 REVERSE LENGTH=405
          Length = 405

 Score =  492 bits (1267), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/400 (60%), Positives = 287/400 (71%), Gaps = 1/400 (0%)

Query: 7   VEELPLPALFEQAREIHATATESGADQELVKKGYETLQKCEDMVNKLGLFSANETKEDIS 66
           +EE+PL  LFEQAR+IH  A+ESG DQ++VKKG E  QKCEDM+ KL LFS+NETKEDIS
Sbjct: 6   MEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNETKEDIS 65

Query: 67  TGNLKYILVPFYLAELTEQIAQDDRIQIVKASQAKLKEFISFCEAMELVPKEELESYTQG 126
           T NLKY+LVP+YLAELTE+I Q+DRIQIVKAS AKLKEF SFCEAMELVP EELE+ ++G
Sbjct: 66  TNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELEASSRG 125

Query: 127 APKSVADQXXXXXXXXXXXXXXESKLLEIKERKERRGRSTKAAALSTPVXXXXXXXXXXX 186
              + AD+              E+KLLEIKERKERRGRSTKA+ALSTPV           
Sbjct: 126 GSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDDIPDDD 185

Query: 187 XXXXXXXWNTTISLAICKALDXXXXXXXXXXXXXAVKDRQSKEGDKEFSKEVLDERAMKA 246
                  W ++I+LAICKA+D             A+K+RQ K+G+  FS++ LD+R  KA
Sbjct: 186 SEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDDRTKKA 245

Query: 247 EAWHRDSAVRAQYTKPSQPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLINGRFV 306
           E WHRD+A R QY+KP+QPITCATFAQDVLEGRA  SQ H+HK+QPLIFGPAS++ G   
Sbjct: 246 ETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIVGGPLS 305

Query: 307 TERERVAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQENNVRLMEEANSSWYKEKK-SKP 365
           TERER+ AQVFQPSHRMPTM IE+AGL EM IMN WQE   + +EEA +SWY +K   + 
Sbjct: 306 TERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDKPLRRK 365

Query: 366 GXXXXXXXXXXXAQERARALDDWKDENPRGAGNSKLTPCG 405
                       A  +ARA DDWKD+NPRGAGN KLTPCG
Sbjct: 366 EEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405