Miyakogusa Predicted Gene

Lj3g3v0537380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0537380.1 tr|A9TR90|A9TR90_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_96103
,34.39,6e-17,seg,NULL,CUFF.40938.1
         (190 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G19220.1 | Symbols: CYO1, SCO2 | protein disulfide isomerases...   168   2e-42

>AT3G19220.1 | Symbols: CYO1, SCO2 | protein disulfide isomerases |
           chr3:6659207-6660488 FORWARD LENGTH=187
          Length = 187

 Score =  168 bits (425), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 95/118 (80%)

Query: 69  NDGVRVKAKEKKWSRNRESYLVDDAEPLPLPMTHPDSSPVSREEIDKRLRCDPKTEDCKE 128
            +G + + +   WS++ ESYLVDD + LPLPMT+PD+SPVS + ID+RL+CDP  EDC+E
Sbjct: 67  GEGAKWRKRRLLWSKSGESYLVDDGDALPLPMTYPDTSPVSPDVIDRRLQCDPVVEDCRE 126

Query: 129 VVYEWTGECRSCQGSRYMSYYNKRGKELTSKCIPCMGIGYVQKITARKGIDQMEDLDN 186
           VVYEWTG+CRSCQGS  +SYY KRGKE+  KCIPC GIGYVQKIT+R  I+ MEDLDN
Sbjct: 127 VVYEWTGKCRSCQGSGTVSYYKKRGKEVICKCIPCQGIGYVQKITSRTDIEVMEDLDN 184