Miyakogusa Predicted Gene

Lj3g3v0525150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0525150.1 tr|B9GP56|B9GP56_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551949 PE=4
SV=1,77.59,2e-18,FKBP_C,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; seg,NULL; FKBP-like,NULL; FKBP_PPIASE,CUFF.40925.1
         (246 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60370.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...   301   3e-82
AT2G43560.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    73   2e-13
AT5G13410.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    64   1e-10
AT4G19830.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    63   2e-10
AT5G45680.1 | Symbols: ATFKBP13, FKBP13 | FK506-binding protein ...    61   9e-10
AT4G39710.1 | Symbols: FKBP16-2 | FK506-binding protein 16-2 | c...    60   2e-09
AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type peptid...    60   2e-09
AT4G25340.1 | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN ...    58   6e-09
AT5G05420.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    57   9e-09
AT3G12340.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    55   3e-08
AT3G25230.2 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 ...    54   7e-08
AT3G25230.1 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 ...    54   7e-08
AT1G73655.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    51   7e-07
AT4G26555.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans is...    50   9e-07
AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 ...    49   3e-06

>AT3G60370.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr3:22315000-22316533
           REVERSE LENGTH=242
          Length = 242

 Score =  301 bits (771), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 143/184 (77%), Positives = 167/184 (90%)

Query: 63  VFPTLSSYGKTKGINPFNEKRLLQQNKQIQKANYAPEDFPNFIREGFEVKVISSENYIKC 122
           + P LSS  KTK  +P++E+RLL+QNK+IQ+ N AP++FPNF+REGFEVKV++S+NYIK 
Sbjct: 59  LLPALSSSAKTKSKSPYDERRLLEQNKRIQRENNAPDEFPNFVREGFEVKVLASDNYIKA 118

Query: 123 DSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGF 182
           DSGLIYRDF VG+GD PKDGQQVTFHY GYNESGRRIDSTY+QGSPA+IRMGT ALVPGF
Sbjct: 119 DSGLIYRDFNVGQGDFPKDGQQVTFHYIGYNESGRRIDSTYIQGSPARIRMGTNALVPGF 178

Query: 183 EEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLGIQNCERRTVLAFYSD 242
           E GI+DM+PGG+RRIIIPPELGPPVGPSTFFS+KQFEVFDVELL IQNCERRT++ FYSD
Sbjct: 179 EMGIRDMKPGGRRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIIGFYSD 238

Query: 243 VVCN 246
           V C+
Sbjct: 239 VTCS 242


>AT2G43560.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr2:18073995-18075385
           REVERSE LENGTH=223
          Length = 223

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 94  ANYAPEDFPNFIREGFEVKVISSENYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYN 153
           A   PED P       E K + +   +  +SGL Y+D +VG+G  P  G QV  +Y    
Sbjct: 77  AGLPPEDKPRLCEAECE-KELENVPMVTTESGLQYKDIKVGRGPSPPVGFQVAANYVAMV 135

Query: 154 ESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFF 213
            SG+  DS+  +G P   R+G+  ++ G +EGI  M+ GGKRR+ IP   GP   P    
Sbjct: 136 PSGQIFDSSLEKGLPYLFRVGSGQVIKGLDEGILSMKAGGKRRLYIP---GPLAFPKGLV 192

Query: 214 SA 215
           SA
Sbjct: 193 SA 194


>AT5G13410.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr5:4299830-4301706 REVERSE
           LENGTH=256
          Length = 256

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 62/143 (43%), Gaps = 32/143 (22%)

Query: 118 NYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYN--------ESGRRIDSTYLQGSPA 169
           +Y +  SGL Y+D  VG G   K G +V   + GY         E+  +      +G   
Sbjct: 111 DYTETQSGLQYKDLRVGTGPIAKKGDKVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDK 170

Query: 170 ---KIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVG--------PSTFFSAKQF 218
              K  +G+  ++P FEE +  M  GG RRII+PPELG P          P TF   +  
Sbjct: 171 EFFKFTLGSNEVIPAFEEAVSGMALGGIRRIIVPPELGYPDNDYNKSGPRPMTFSGQRAL 230

Query: 219 E-------------VFDVELLGI 228
           +             +FDVELL I
Sbjct: 231 DFVLRNQGLIDKTLLFDVELLKI 253


>AT4G19830.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr4:10772579-10773933
           REVERSE LENGTH=229
          Length = 229

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 33/147 (22%)

Query: 120 IKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTG--YNESGRRIDSTYL------QGSPAKI 171
           I    G+   D  +G GD P +G Q+  HY G    + G R DSTY       +  P   
Sbjct: 83  IPNSGGVKALDLRIGDGDVPIEGDQIEIHYYGRLAAKQGWRFDSTYDHKDSNGEAVPFTF 142

Query: 172 RMGTKALVPGFEEGIKDMRPGGKRRIIIPPELG------PPVGPSTFFSAKQFE------ 219
            +G+  ++PG E  ++ M+ GG RR++IPP  G       P+ P+ F   + F       
Sbjct: 143 VLGSSKVIPGIETAVRSMKVGGIRRVVIPPSQGYQNTSQEPLPPNFFDRQRLFTTIFNPT 202

Query: 220 -------------VFDVELLGIQNCER 233
                        VFD+EL+  +   R
Sbjct: 203 RLANGEGSTLGTLVFDIELVSTRRLHR 229


>AT5G45680.1 | Symbols: ATFKBP13, FKBP13 | FK506-binding protein 13
           | chr5:18530894-18532128 FORWARD LENGTH=208
          Length = 208

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 12/116 (10%)

Query: 124 SGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFE 183
           SGL + D  VG G     GQ +  HY G  E+G+  DS+Y +G P   R+G   ++ G++
Sbjct: 91  SGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWD 150

Query: 184 EGIKD------MRPGGKRRIIIPPEL------GPPVGPSTFFSAKQFEVFDVELLG 227
           +GI        M  GGKR + IPPEL          G S         +FD+E +G
Sbjct: 151 QGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIG 206


>AT4G39710.1 | Symbols: FKBP16-2 | FK506-binding protein 16-2 |
           chr4:18427249-18428325 REVERSE LENGTH=217
          Length = 217

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 6/103 (5%)

Query: 119 YIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKAL 178
           Y    SGL + D +VG GD    G  V  HYT     G   DS+Y +  P  +R+G   +
Sbjct: 89  YSYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKV 148

Query: 179 VPGFE------EGIKDMRPGGKRRIIIPPELGPPVGPSTFFSA 215
           + G +      EG+  MR GGKR++ IPP+L     P+  FS 
Sbjct: 149 IRGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFSG 191


>AT5G48570.1 | Symbols: ROF2, ATFKBP65, FKBP65 | FKBP-type
           peptidyl-prolyl cis-trans isomerase family protein |
           chr5:19690746-19693656 REVERSE LENGTH=578
          Length = 578

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 13/107 (12%)

Query: 132 EVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDMRP 191
           E  K D P++G +V  HYTG    G + DS+  +G+P K  +G   ++ G++ GIK M+ 
Sbjct: 55  ECEKWDTPENGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGHVIKGWDLGIKTMKK 114

Query: 192 GGKRRIIIPPELG-------PPVGPSTFFSAKQFEVFDVELLGIQNC 231
           G      IPPEL        P + P+          FDVEL+  ++ 
Sbjct: 115 GENAIFTIPPELAYGETGSPPTIPPNATLQ------FDVELIAWRSV 155


>AT4G25340.1 | Symbols: FKBP53, ATFKBP53 | FK506 BINDING PROTEIN 53
           | chr4:12959657-12962632 REVERSE LENGTH=477
          Length = 477

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 3/109 (2%)

Query: 124 SGLIYRDFEVGK--GDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPG 181
           +GLI  +  +GK  G     G+ V+  Y G  +   +I  + +  SP K R+G  +++ G
Sbjct: 369 NGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGKSPFKFRLGIGSVIKG 428

Query: 182 FEEGIKDMRPGGKRRIIIPPELGPPV-GPSTFFSAKQFEVFDVELLGIQ 229
           ++ G+  MR G KR++ IPP +G  V G         +  FDVEL+ +Q
Sbjct: 429 WDVGVNGMRVGDKRKLTIPPSMGYGVKGAGGQIPPNSWLTFDVELINVQ 477


>AT5G05420.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr5:1604040-1604823 REVERSE
           LENGTH=143
          Length = 143

 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%)

Query: 114 ISSENYIKCDSGLIYRDFEVGK--GDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKI 171
           IS E       GLI  +  +G   G   + G++V+ HYTG  +   +I  + +  S  K 
Sbjct: 26  ISVEKQTPDLDGLIVEELCMGNPNGKKAEPGKRVSVHYTGKLQGNGKIFDSTVGKSRYKF 85

Query: 172 RMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLGIQ 229
           R+    ++ G + G+  M  GGKR++ IPPE+G     +       + VFDVELL ++
Sbjct: 86  RLDAGKVIKGLDVGLNGMLVGGKRKLTIPPEMGYGAEGAGSIPPDSWLVFDVELLNVK 143


>AT3G12340.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr3:3925720-3929346 REVERSE
           LENGTH=499
          Length = 499

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)

Query: 124 SGLIYRDFEVGK--GDCPKDGQQVTFHYTG-YNESGRRIDSTYLQGSPAKIRMGTKALVP 180
           +G+I  D E GK  G     G++V+  YTG   ++G   DS  L   P + R+G + ++ 
Sbjct: 391 NGVIIEDIEKGKLDGKSAVKGKKVSILYTGKLKDTGNLFDSN-LGEDPLRFRLGGENVIE 449

Query: 181 GFEEGIKDMRPGGKRRIIIPPELG-PPVGPSTFFSAKQFEVFDVELLGIQ 229
           G   G++ MR G KRR+IIPP LG    G         + V++VE + I+
Sbjct: 450 GLSIGVEGMRVGDKRRLIIPPALGYSKRGLKEKVPKSAWLVYEVEAVKIR 499


>AT3G25230.2 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 |
           chr3:9188257-9191175 FORWARD LENGTH=562
          Length = 562

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 125 GLIYRDFEVGKG-DCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFE 183
           GL  +  + G+G + P++G +V  HYTG    G + DS+  + +P K  +G   ++ G++
Sbjct: 39  GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWD 98

Query: 184 EGIKDMRPGGKRRIIIPPEL--GPPVGPSTFFSAKQFEVFDVELL 226
            GIK M+ G      IP EL  G    P T  +    + FDVELL
Sbjct: 99  IGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQ-FDVELL 142


>AT3G25230.1 | Symbols: ROF1, ATFKBP62, FKBP62 | rotamase FKBP 1 |
           chr3:9188257-9191137 FORWARD LENGTH=551
          Length = 551

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 4/105 (3%)

Query: 125 GLIYRDFEVGKG-DCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFE 183
           GL  +  + G+G + P++G +V  HYTG    G + DS+  + +P K  +G   ++ G++
Sbjct: 39  GLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWD 98

Query: 184 EGIKDMRPGGKRRIIIPPEL--GPPVGPSTFFSAKQFEVFDVELL 226
            GIK M+ G      IP EL  G    P T  +    + FDVELL
Sbjct: 99  IGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQ-FDVELL 142


>AT1G73655.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr1:27690468-27691781
           REVERSE LENGTH=234
          Length = 234

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 114 ISSENYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRM 173
           +  +  I   +G+ Y D +VG G  P  G  V F   G      ++      G    + M
Sbjct: 102 LEKQEEIILPNGIRYYDLQVGSGATPSSGYLVVFDVKGQVHGTEQVFVDTFGGKGKSLAM 161

Query: 174 G------TKALVPGFEEGIKDMRPGGKRRIIIPPELG 204
                  +K L  G E  ++ M+ GGKRR+IIPP LG
Sbjct: 162 VMDSRPYSKGLCQGIEHVLRSMKAGGKRRVIIPPSLG 198


>AT4G26555.1 | Symbols:  | FKBP-like peptidyl-prolyl cis-trans
           isomerase family protein | chr4:13404622-13406178
           REVERSE LENGTH=207
          Length = 207

 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 16/145 (11%)

Query: 100 DFPNFIREGFEVKVISSENYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRI 159
           DFP+      ++K       +K  SG+ Y++   G+G    +G  V  +Y     +G  +
Sbjct: 62  DFPSLAAPVPQMKEPEVIRTLKLPSGVRYQEIIEGEGREAHEGDLVELNYVCRRANGYFV 121

Query: 160 DSTYLQ----GSPAKIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELG------PPV-- 207
            ST  Q     SP K+ +    ++ G +E +  M+ GGKRR +IPP +G       P+  
Sbjct: 122 HSTVDQFSGESSPVKLILDENDVIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPE 181

Query: 208 --GP--STFFSAKQFEVFDVELLGI 228
             GP  S    A +  VF+++LL +
Sbjct: 182 EFGPRRSLLSHANEPLVFEIQLLKV 206


>AT3G25220.1 | Symbols: FKBP15-1 | FK506-binding protein 15 kD-1 |
           chr3:9182691-9184463 FORWARD LENGTH=153
          Length = 153

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 21/107 (19%)

Query: 130 DFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDM 189
           D +  KGD      ++  HY G    G   DS++ +G P +  +GT  ++PG+++G+   
Sbjct: 46  DLQAHKGD------KIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGA 99

Query: 190 RPGGKRRIIIPPELG------PPV--GPSTFFSAKQFEVFDVELLGI 228
             G KR++ IP +LG      PP   G +T        +FD EL+ +
Sbjct: 100 CVGEKRKLKIPSKLGYGDNGSPPKIPGGATL-------IFDTELVAV 139