Miyakogusa Predicted Gene
- Lj3g3v0509640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0509640.1 tr|G7LBK0|G7LBK0_MEDTR 3-hydroxyisobutyryl-CoA
hydrolase-like protein OS=Medicago truncatula
GN=MTR_,81.77,0,LAMBDA-CRYSTALLIN HOMOLOG
[SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q9Y2S2],NULL; ENOYL-COA
HYDRATASE-RELATE,CUFF.40974.1
(406 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G60510.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 529 e-150
AT3G60510.3 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 516 e-146
AT4G31810.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 509 e-144
AT3G60510.2 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 395 e-110
AT5G65940.1 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 347 1e-95
AT2G30660.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 341 4e-94
AT2G30650.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 336 2e-92
AT5G65940.3 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 318 5e-87
AT1G06550.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 305 4e-83
AT5G65940.2 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrola... 303 1e-82
AT4G13360.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 187 1e-47
AT3G24360.2 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 180 2e-45
AT3G24360.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 173 2e-43
AT5G43280.2 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 62 6e-10
AT5G43280.1 | Symbols: ATDCI1, DCI1 | delta(3,5),delta(2,4)-dien... 62 7e-10
AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp) prote... 59 8e-09
AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA hydratase/iso... 52 9e-07
>AT3G60510.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr3:22357141-22360003 REVERSE LENGTH=401
Length = 401
Score = 529 bits (1362), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/370 (68%), Positives = 312/370 (84%)
Query: 36 QDDHNNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSG 95
+D + VLVEG+GCSR AILNRP ALNA+ T MG RL KLY++WE++P+IGFVM KGSG
Sbjct: 32 SEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG 91
Query: 96 RAFAAGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGI 155
RAF AGGDIV+LYHL +G +A +EFF ++YSF+YL+GTY+KPHVA+LNG+TMGGG G+
Sbjct: 92 RAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGV 151
Query: 156 SIPGTFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTC 215
SIPGTFRVATD+T FATPE IGFHPDAGASF LSHLPG LGEYL LTG KL+G EM+ C
Sbjct: 152 SIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLAC 211
Query: 216 GLATHYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFC 275
GLATHY E +P++EEQL KL+TDDPSV+E+ LE+ ++ H +++ +++R+++L+KCF
Sbjct: 212 GLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271
Query: 276 HDTVEEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSRE 335
HDTVEEI+D+LE+ AS KD WCI+TL RLKE+SPLSLKV+LRSIREGR QTLDQCL RE
Sbjct: 272 HDTVEEIIDSLEIEASRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIRE 331
Query: 336 YRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLPLSEFEPDL 395
YRM+LQG+ +SG+FCEGVRAR++DKD APKWDPP+LEKVSEDMVD YF L+ EPDL
Sbjct: 332 YRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTEPDL 391
Query: 396 ELPTKVREAF 405
+LP K+RE+
Sbjct: 392 DLPVKLRESI 401
>AT3G60510.3 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr3:22357141-22360003 REVERSE LENGTH=426
Length = 426
Score = 516 bits (1329), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/395 (63%), Positives = 312/395 (78%), Gaps = 25/395 (6%)
Query: 36 QDDHNNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSG 95
+D + VLVEG+GCSR AILNRP ALNA+ T MG RL KLY++WE++P+IGFVM KGSG
Sbjct: 32 SEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG 91
Query: 96 RAFAAGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGI 155
RAF AGGDIV+LYHL +G +A +EFF ++YSF+YL+GTY+KPHVA+LNG+TMGGG G+
Sbjct: 92 RAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGV 151
Query: 156 SIPGTFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTC 215
SIPGTFRVATD+T FATPE IGFHPDAGASF LSHLPG LGEYL LTG KL+G EM+ C
Sbjct: 152 SIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLAC 211
Query: 216 GLATHYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFC 275
GLATHY E +P++EEQL KL+TDDPSV+E+ LE+ ++ H +++ +++R+++L+KCF
Sbjct: 212 GLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271
Query: 276 HDTVEEIVDAL-------------------------EVAASETKDAWCISTLNRLKEASP 310
HDTVEEI+D+L E+ AS KD WCI+TL RLKE+SP
Sbjct: 272 HDTVEEIIDSLVSFFTNDSASMTISVTRSNSVLGHQEIEASRRKDTWCITTLRRLKESSP 331
Query: 311 LSLKVSLRSIREGRFQTLDQCLSREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDP 370
LSLKV+LRSIREGR QTLDQCL REYRM+LQG+ +SG+FCEGVRAR++DKD APKWDP
Sbjct: 332 LSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDP 391
Query: 371 PTLEKVSEDMVDQYFLPLSEFEPDLELPTKVREAF 405
P+LEKVSEDMVD YF L+ EPDL+LP K+RE+
Sbjct: 392 PSLEKVSEDMVDDYFCALTPTEPDLDLPVKLRESI 426
>AT4G31810.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr4:15387365-15390290 REVERSE LENGTH=409
Length = 409
Score = 509 bits (1311), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/409 (59%), Positives = 307/409 (75%), Gaps = 5/409 (1%)
Query: 3 MQSRRALRLAKTAKQXXXXXXXXXXXXVPPQHHQDDHN--NNVLVEGNGCSRIAILNRPS 60
MQ+ +ALR Q P + D + + VLVEG SR AILN PS
Sbjct: 1 MQTVKALRRVSEPLQWVRSVSYGRRFSALPNYSASDADFEDQVLVEGKAKSRAAILNNPS 60
Query: 61 ALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFAAGGDIVALYHLINKGKMEACK 120
+LNA++ M RL +LY SWE+NP I FV+ KGSG+ F +G D+++LYH IN+G E K
Sbjct: 61 SLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESK 120
Query: 121 EFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATDKTRFATPEVHIGFH 180
FF +Y FVYL GTY+KP++A+++G+TMG G GIS+PG FRVATDKT A PEV IGFH
Sbjct: 121 LFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFH 180
Query: 181 PDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLIERLPLIEEQLGKLITD 240
PDAGAS+YLS LPG+LGEYLALTG+KLNGVEM+ CGLATHY L RLPLIEE++GKL+TD
Sbjct: 181 PDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERIGKLLTD 240
Query: 241 DPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTVEEIVDALEVAASETKDAWCIS 300
DP+VIE +L QYGDLV+ D SS+L ++E++DK F DTVEEI++A+E A+ + + WC
Sbjct: 241 DPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANSCNEWCKK 300
Query: 301 TLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMTLQGISKQISGDFCEGVRARVV 360
TL ++KEASPLSLK++L+SIREGRFQTLDQCL+ EYR+++ G+SK +SGDFCEG+RAR+V
Sbjct: 301 TLKQIKEASPLSLKITLQSIREGRFQTLDQCLTHEYRISICGVSKVVSGDFCEGIRARLV 360
Query: 361 DKDLAPKWDPPTLEKVSEDMVDQYFLPLSEF---EPDLELPTKVREAFL 406
DKD APKWDPP LE VS+DMVD YF P SE + +L+LPT RE +
Sbjct: 361 DKDFAPKWDPPRLEDVSKDMVDCYFTPASELDDSDSELKLPTAQREPYF 409
>AT3G60510.2 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr3:22357584-22360003 REVERSE LENGTH=317
Length = 317
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 240/285 (84%)
Query: 36 QDDHNNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSG 95
+D + VLVEG+GCSR AILNRP ALNA+ T MG RL KLY++WE++P+IGFVM KGSG
Sbjct: 32 SEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG 91
Query: 96 RAFAAGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGI 155
RAF AGGDIV+LYHL +G +A +EFF ++YSF+YL+GTY+KPHVA+LNG+TMGGG G+
Sbjct: 92 RAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGV 151
Query: 156 SIPGTFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTC 215
SIPGTFRVATD+T FATPE IGFHPDAGASF LSHLPG LGEYL LTG KL+G EM+ C
Sbjct: 152 SIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLAC 211
Query: 216 GLATHYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFC 275
GLATHY E +P++EEQL KL+TDDPSV+E+ LE+ ++ H +++ +++R+++L+KCF
Sbjct: 212 GLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271
Query: 276 HDTVEEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSI 320
HDTVEEI+D+LE+ AS KD WCI+TL RLKE+SPLSLKV+LRS+
Sbjct: 272 HDTVEEIIDSLEIEASRRKDTWCITTLRRLKESSPLSLKVALRSL 316
>AT5G65940.1 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26376830-26379161 REVERSE LENGTH=378
Length = 378
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/361 (47%), Positives = 234/361 (64%), Gaps = 1/361 (0%)
Query: 40 NNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFA 99
+ VLVE RI LNRP LNA++ M +RL +L+ ++E++P + V+ KG GRAF
Sbjct: 8 QSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFC 67
Query: 100 AGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPG 159
AGGD+ A+ IN+G +F + Y Y++ TY K V++LNGI MGGGAG+S+ G
Sbjct: 68 AGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHG 127
Query: 160 TFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLAT 219
FR+AT+ T FA PE +G PD GAS++LS LPG GEY+ LTG +L+G EM+ CGLAT
Sbjct: 128 RFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLAT 187
Query: 220 HYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTV 279
H+ RL +E L ++ ++DP+ T L+ Y + S +RL+++D+CF TV
Sbjct: 188 HFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTV 247
Query: 280 EEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMT 339
EEI+ ALE A++ D W +T+ LK+ SP SLK+SLRSIREGR Q + QCL REYRM
Sbjct: 248 EEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMV 307
Query: 340 LQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLPLSEFEPDLELPT 399
+ +IS DF EG RA +VDKD PKW+P LE + + MV+QYF + E E DL+LP
Sbjct: 308 CHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV-EREDDLKLPP 366
Query: 400 K 400
+
Sbjct: 367 R 367
>AT2G30660.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr2:13058500-13061665 REVERSE LENGTH=378
Length = 378
Score = 341 bits (875), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/346 (46%), Positives = 226/346 (65%)
Query: 40 NNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFA 99
+ VLVE RI LNRP LNA+ +M +RL +L+R++E++P + V+ KG GRAF
Sbjct: 4 QSQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFC 63
Query: 100 AGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPG 159
AGGD+ + + +GK +FFR Y+ Y++ TY KP V++LNGI MG GAG+SI G
Sbjct: 64 AGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHG 123
Query: 160 TFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLAT 219
FR+AT+ T FA PE +G PD GAS++LS LPG GEY+ LTG +L+G E++ CGLAT
Sbjct: 124 RFRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLAT 183
Query: 220 HYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTV 279
H+ RL +E L K+ + DPS + T L+ Y H + S RL+++D+CF T+
Sbjct: 184 HFVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTM 243
Query: 280 EEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMT 339
EEI+ ALE ++ D W ++T+ LK++SP SLK+SLRSIREGR Q + CL+REYRM
Sbjct: 244 EEIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYRMV 303
Query: 340 LQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYF 385
+ +S D EG RA ++DKD PKW+P LE + + MVDQ+F
Sbjct: 304 CHVMKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFF 349
>AT2G30650.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein |
chr2:13053777-13056315 REVERSE LENGTH=378
Length = 378
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/363 (45%), Positives = 234/363 (64%), Gaps = 2/363 (0%)
Query: 40 NNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFA 99
++ VLVE RI NRP LNA++ M +RL +L+ ++E++P + V+ KG GRAF+
Sbjct: 4 HSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFS 63
Query: 100 AGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPG 159
AGGDI + I +GK+ +F+ Y+ Y++ TY KP V++LNGI MGGGAG+S G
Sbjct: 64 AGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNG 123
Query: 160 TFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLAT 219
FR+AT+ T FA PE +G PD GAS++LS LPG GEY+ LTG +L+G EM+ CGLAT
Sbjct: 124 RFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLAT 183
Query: 220 HYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTV 279
H+ L +E +L K+ + + + I T L+ Y + H ++ S RL+++D+CF TV
Sbjct: 184 HFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTV 243
Query: 280 EEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMT 339
EEI ALE ++ + W ++T+ L++ASP LK+SLRSIREGR Q + QCL REYRM
Sbjct: 244 EEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMV 303
Query: 340 LQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLPLSEFE--PDLEL 397
+ IS DF EG RA ++DKD PKW P LE V++ MVDQYF + + E DL+
Sbjct: 304 CHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKF 363
Query: 398 PTK 400
P +
Sbjct: 364 PPR 366
>AT5G65940.3 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26376927-26379161 REVERSE LENGTH=342
Length = 342
Score = 318 bits (815), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 155/328 (47%), Positives = 212/328 (64%)
Query: 40 NNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFA 99
+ VLVE RI LNRP LNA++ M +RL +L+ ++E++P + V+ KG GRAF
Sbjct: 8 QSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFC 67
Query: 100 AGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPG 159
AGGD+ A+ IN+G +F + Y Y++ TY K V++LNGI MGGGAG+S+ G
Sbjct: 68 AGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHG 127
Query: 160 TFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLAT 219
FR+AT+ T FA PE +G PD GAS++LS LPG GEY+ LTG +L+G EM+ CGLAT
Sbjct: 128 RFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLAT 187
Query: 220 HYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTV 279
H+ RL +E L ++ ++DP+ T L+ Y + S +RL+++D+CF TV
Sbjct: 188 HFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTV 247
Query: 280 EEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMT 339
EEI+ ALE A++ D W +T+ LK+ SP SLK+SLRSIREGR Q + QCL REYRM
Sbjct: 248 EEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMV 307
Query: 340 LQGISKQISGDFCEGVRARVVDKDLAPK 367
+ +IS DF EG RA +VDKD PK
Sbjct: 308 CHVMKGEISKDFVEGCRAILVDKDKNPK 335
>AT1G06550.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr1:2003834-2006564
REVERSE LENGTH=387
Length = 387
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/366 (40%), Positives = 227/366 (62%), Gaps = 2/366 (0%)
Query: 33 QHHQDDHNNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAK 92
Q Q+ V+ E G R+ LNRP LN I+ + +L + WE + ++ K
Sbjct: 3 QEGQNIDEPVVIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIK 62
Query: 93 GSGRAFAAGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGG 152
G+GRAF+AGGD+ YH + ++C E +Y Y I TY K V+L+NGI+MGGG
Sbjct: 63 GTGRAFSAGGDLKVFYH--GQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGG 120
Query: 153 AGISIPGTFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEM 212
A + +P F V T+KT FATPE GFH D G S+ S LPGHLGE+LALTG +LNG E+
Sbjct: 121 AALMVPMKFSVVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKEL 180
Query: 213 VTCGLATHYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDK 272
V G+ATH+ +L +E +L L + D V+++T+E++ + V+ D+ SIL + ++++
Sbjct: 181 VAIGMATHFVPSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINE 240
Query: 273 CFCHDTVEEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCL 332
CF ++V++I+ A E AS+ + W + LK +SP LK+ L+SIREGR QTL CL
Sbjct: 241 CFSKESVKQIIQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCL 300
Query: 333 SREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLPLSEFE 392
+E+R+TL + K IS D EG+RA +DKD +PKW+P TL++V ++ ++ F + +
Sbjct: 301 KKEFRLTLNILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFKLFEDDD 360
Query: 393 PDLELP 398
+L++P
Sbjct: 361 IELQIP 366
>AT5G65940.2 | Symbols: CHY1 | beta-hydroxyisobutyryl-CoA hydrolase
1 | chr5:26377132-26379161 REVERSE LENGTH=328
Length = 328
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/318 (46%), Positives = 205/318 (64%)
Query: 40 NNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFA 99
+ VLVE RI LNRP LNA++ M +RL +L+ ++E++P + V+ KG GRAF
Sbjct: 8 QSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFC 67
Query: 100 AGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPG 159
AGGD+ A+ IN+G +F + Y Y++ TY K V++LNGI MGGGAG+S+ G
Sbjct: 68 AGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHG 127
Query: 160 TFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLAT 219
FR+AT+ T FA PE +G PD GAS++LS LPG GEY+ LTG +L+G EM+ CGLAT
Sbjct: 128 RFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLAT 187
Query: 220 HYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTV 279
H+ RL +E L ++ ++DP+ T L+ Y + S +RL+++D+CF TV
Sbjct: 188 HFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTV 247
Query: 280 EEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMT 339
EEI+ ALE A++ D W +T+ LK+ SP SLK+SLRSIREGR Q + QCL REYRM
Sbjct: 248 EEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCLIREYRMV 307
Query: 340 LQGISKQISGDFCEGVRA 357
+ +IS DF E ++A
Sbjct: 308 CHVMKGEISKDFVEVLQA 325
>AT4G13360.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr4:7775133-7777701
FORWARD LENGTH=421
Length = 421
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 199/369 (53%), Gaps = 28/369 (7%)
Query: 48 NGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGS-GRAFAAGGDIVA 106
NG + I L+R ALNA+N M + WE +P + V+ +GS RAF AG DI
Sbjct: 57 NGVALIT-LDRTKALNAMNLDMDIKYKSFLDEWESDPRVKCVIVEGSTSRAFCAGMDIKG 115
Query: 107 LYHLINKGK-MEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVAT 165
+ I K K ++ F Y+ + I Y KP+++L++GITMG G G+S G +RV T
Sbjct: 116 VAAEIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVIT 175
Query: 166 DKTRFATPEVHIGFHPDAGASFYLSHLP--GHLGEYLALTGEKLNG-VEMVTCGLATHYS 222
++T A PE IG PD G S+ +H P G +G YL LTG++++ + + GL THY
Sbjct: 176 ERTVLAMPENGIGLFPDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYV 235
Query: 223 LIERLPLIEEQ-LGKLITDDPSV-IETTLEQYGDLVHKDRSSILQRLEILDKCFCHD-TV 279
E+L ++E L +++DP+ I+ TL +Y + + + L ++ F + ++
Sbjct: 236 PSEKLASLKEAILSANLSEDPNQDIQATLSKYSSNPESE-AHLKSLLPHIESAFSSNKSI 294
Query: 280 EEIVDALEVAASETKDA---WCISTLNRLKEASPLSLKVS---------LRSIREGRFQT 327
+E ++ L+ T+ + W L L++ +P SL ++ +S E T
Sbjct: 295 KETIEELKKYQQSTESSVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELAT 354
Query: 328 LDQCLSREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLP 387
L+ + EYR+ L+ + GDF EGVRA ++DKD PKW+P ++E+V E+ V+ F P
Sbjct: 355 LNGVMKTEYRIALRS---ALRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKP 411
Query: 388 LSEFEPDLE 396
LS P++E
Sbjct: 412 LS---PEVE 417
>AT3G24360.2 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr3:8839832-8842799
REVERSE LENGTH=414
Length = 414
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 191/366 (52%), Gaps = 30/366 (8%)
Query: 48 NGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGS-GRAFAAGGDIVA 106
NG + I L+RP ALNA+N M + L WE +P + V+ +GS RAF AGGD+
Sbjct: 54 NGVALIT-LDRPKALNAMNLEMDLKYKSLLDEWEYDPGVKCVVVEGSTSRAFCAGGDV-- 110
Query: 107 LYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATD 166
+ +K ++ E F YS + I Y KP+++L++GITMG G G+S G +RV T+
Sbjct: 111 -KQITSKNQLSDMIEVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVITE 169
Query: 167 KTRFATPEVHIGFHPDAGASFYLSHLPGH--LGEYLALTGEKLNG-VEMVTCGLATHYSL 223
+T A PE IG PD G S+ +H PG +G YL +TG +++ + + GL THY
Sbjct: 170 RTVLAMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYVP 229
Query: 224 IERL-PLIEEQLGKLITDDPSV-IETTLEQYGDLVHKDRSSILQRL--EILDKCFCHDTV 279
+L L E L ++ DP I+ TL Y + S LQ L +I +V
Sbjct: 230 SGKLGSLREAILSADLSKDPQQHIQATLSNYSS--DPETESHLQMLLPQIESAFSVSKSV 287
Query: 280 EEIVDALE--VAASETKDA-WCISTLNRLKEASPLSLKVSLRSIRE---------GRFQT 327
+E ++ L+ +SE A W + +++ +P SL ++ + + T
Sbjct: 288 KETIEELKKFQQSSEASVAEWANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMAT 347
Query: 328 LDQCLSREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLP 387
L+ + EYR+ L+ + DF EGVRA + DKD PKW P +L++V E VD F+P
Sbjct: 348 LNGVMITEYRIALR---SALRSDFTEGVRAVLTDKDQNPKWKPASLDEVDETEVDALFMP 404
Query: 388 LS-EFE 392
LS EFE
Sbjct: 405 LSPEFE 410
>AT3G24360.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr3:8839832-8842799
REVERSE LENGTH=418
Length = 418
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 190/367 (51%), Gaps = 28/367 (7%)
Query: 48 NGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGS-GRAFAAGGDIVA 106
NG + I L+RP ALNA+N M + L WE +P + V+ +GS RAF AG DI
Sbjct: 54 NGVALIT-LDRPKALNAMNLEMDLKYKSLLDEWEYDPGVKCVVVEGSTSRAFCAGMDIKG 112
Query: 107 LYHLINKGKMEA-CKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVAT 165
+ I K + ++ F YS + I Y KP+++L++GITMG G G+S G +RV T
Sbjct: 113 VVAEILMDKNTSLVQKVFTAEYSLICKIAGYRKPYISLMDGITMGFGLGLSGHGRYRVIT 172
Query: 166 DKTRFATPEVHIGFHPDAGASFYLSHLPGH--LGEYLALTGEKLNG-VEMVTCGLATHYS 222
++T A PE IG PD G S+ +H PG +G YL +TG +++ + + GL THY
Sbjct: 173 ERTVLAMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLGMTGRRISTPSDALFVGLGTHYV 232
Query: 223 LIERL-PLIEEQLGKLITDDPSV-IETTLEQYGDLVHKDRSSILQRL--EILDKCFCHDT 278
+L L E L ++ DP I+ TL Y + S LQ L +I +
Sbjct: 233 PSGKLGSLREAILSADLSKDPQQHIQATLSNYSS--DPETESHLQMLLPQIESAFSVSKS 290
Query: 279 VEEIVDALE--VAASETKDA-WCISTLNRLKEASPLSLKVSLRSIRE---------GRFQ 326
V+E ++ L+ +SE A W + +++ +P SL ++ + +
Sbjct: 291 VKETIEELKKFQQSSEASVAEWANEAVQGIEKGAPFSLYLTHKYFSKVACAKGKTNNAMA 350
Query: 327 TLDQCLSREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFL 386
TL+ + EYR+ L+ + DF EGVRA + DKD PKW P +L++V E VD F+
Sbjct: 351 TLNGVMITEYRIALR---SALRSDFTEGVRAVLTDKDQNPKWKPASLDEVDETEVDALFM 407
Query: 387 PLS-EFE 392
PLS EFE
Sbjct: 408 PLSPEFE 414
>AT5G43280.2 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17368750 FORWARD LENGTH=220
Length = 220
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 15/177 (8%)
Query: 55 ILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFAAGGDIVALYHLI--- 111
I+NRPS LNA++ K S + NPD+ ++ G+G+ F +G D+ +L +
Sbjct: 24 IINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQS 83
Query: 112 ----NKGK-MEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATD 166
++G+ E + +++ + + I KP +A ++G +GGG + R ++
Sbjct: 84 SSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSE 143
Query: 167 KTRFATPEVHIGFHPDAGASFYLSHLPGHLGEY----LALTGEKLNGVEMVTCGLAT 219
F+ EV + D G L LP +G LALT + +G E GL +
Sbjct: 144 DAFFSIKEVDLAIVADLGT---LQRLPSIVGYANAMELALTARRFSGSEAKDLGLVS 197
>AT5G43280.1 | Symbols: ATDCI1, DCI1 |
delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 |
chr5:17367947-17369113 FORWARD LENGTH=278
Length = 278
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 55 ILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFAAGGDIVALYHLI--- 111
I+NRPS LNA++ K S + NPD+ ++ G+G+ F +G D+ +L +
Sbjct: 24 IINRPSHLNALSLDFFIEFPKALSSLDQNPDVSVIILSGAGKHFCSGIDLNSLSSISTQS 83
Query: 112 ----NKGK-MEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATD 166
++G+ E + +++ + + I KP +A ++G +GGG + R ++
Sbjct: 84 SSGNDRGRSSEQLRRKIKSMQAAITAIEQCRKPVIAAIHGACIGGGVDLITACDIRYCSE 143
Query: 167 KTRFATPEVHIGFHPDAGASFYLSHLPGHLGEY-LALTGEKLNGVEMVTCGLAT 219
F+ EV + D G L + G+ LALT + +G E GL +
Sbjct: 144 DAFFSIKEVDLAIVADLGTLQRLPSIVGYANAMELALTARRFSGSEAKDLGLVS 197
>AT4G16800.1 | Symbols: | ATP-dependent caseinolytic (Clp)
protease/crotonase family protein | chr4:9454931-9457000
REVERSE LENGTH=301
Length = 301
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
Query: 56 LNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKG-SGRAFAAGGDIVALYHLINKG 114
L+RP NAIN M L + S + VM + F AG D+ ++
Sbjct: 60 LDRPVTKNAINKEMLKSLQNAFESIHQDNSARVVMIRSLVPGVFCAGADLKE-RRTMSPS 118
Query: 115 KMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATDKTRFATPE 174
++ R ++SF+ + P +A + G +GGG +++ R+ + F PE
Sbjct: 119 EVHTYVNSLRYMFSFIEALSI---PTIAAIEGAALGGGLEMALACDLRICGENAVFGLPE 175
Query: 175 VHIGFHPDAGASFYLSHLPGH-LGEYLALTGEKLNGVEMVTCGL 217
+ P AG + LS L G + + L TG K++ +E GL
Sbjct: 176 TGLAIIPGAGGTQRLSRLVGRSVSKELIFTGRKIDAIEAANKGL 219
>AT4G16210.1 | Symbols: ECHIA, E-COAH-2 | enoyl-CoA
hydratase/isomerase A | chr4:9176864-9177978 REVERSE
LENGTH=265
Length = 265
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 8/149 (5%)
Query: 46 EGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFAAGGDIV 105
E G + I I NRP +LN++ +M L K ++ + + + V+ GSGR+F +G D+
Sbjct: 15 ESGGIAVITI-NRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGRSFCSGVDLT 73
Query: 106 ALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVAT 165
A + KG ++ + V + KP + +NG + G +++ VA+
Sbjct: 74 AAESVF-KGDVKDPE------TDPVVQMERLRKPIIGAINGFAITAGFELALACDILVAS 126
Query: 166 DKTRFATPEVHIGFHPDAGASFYLSHLPG 194
+F G P G S LS + G
Sbjct: 127 RGAKFMDTHARFGIFPSWGLSQKLSRIIG 155