Miyakogusa Predicted Gene

Lj3g3v0509630.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0509630.1 CUFF.40973.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15351.1 | Symbols:  | unknown protein; Has 50 Blast hits to ...   215   1e-56
AT3G15351.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   209   5e-55
AT3G15351.2 | Symbols:  | unknown protein; Has 35333 Blast hits ...   154   4e-38

>AT3G15351.1 | Symbols:  | unknown protein; Has 50 Blast hits to 50
           proteins in 16 species: Archae - 0; Bacteria - 0;
           Metazoa - 7; Fungi - 0; Plants - 43; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:5176726-5177531 FORWARD LENGTH=165
          Length = 165

 Score =  215 bits (547), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 98/139 (70%), Positives = 119/139 (85%)

Query: 26  RHQLVENDKLRNGNREALTVLRKKARTTKSSVPSPFESIMKGVAGTNSRPLVQEVCTTCG 85
           R+Q+VENDK RN NREALT LRK+ARTTK+SV SPF+S+MK + G++++PLVQEVC+TCG
Sbjct: 26  RNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMMKDIHGSSTKPLVQEVCSTCG 85

Query: 86  NHDSSEQTWMMFPGTDLFARIPFHAVHTILETDQAQLDFEAKKLQSTVKEKTYLISETGV 145
           +HDSSE TWMM PG DLFA IPFHAVHT+LE D+ +++FE+KKLQS VKEK   ISE G 
Sbjct: 86  SHDSSEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKMEFESKKLQSLVKEKALFISELGA 145

Query: 146 LADKISPGVLKSLVALTDK 164
           LAD ISPGV++SLVAL DK
Sbjct: 146 LADGISPGVIRSLVALEDK 164


>AT3G15351.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 23 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 43
           Blast hits to 43 proteins in 12 species: Archae - 0;
           Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr3:5177026-5177531 FORWARD LENGTH=137
          Length = 137

 Score =  209 bits (533), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 116/136 (85%)

Query: 29  LVENDKLRNGNREALTVLRKKARTTKSSVPSPFESIMKGVAGTNSRPLVQEVCTTCGNHD 88
           +VENDK RN NREALT LRK+ARTTK+SV SPF+S+MK + G++++PLVQEVC+TCG+HD
Sbjct: 1   MVENDKERNANREALTALRKRARTTKTSVMSPFDSMMKDIHGSSTKPLVQEVCSTCGSHD 60

Query: 89  SSEQTWMMFPGTDLFARIPFHAVHTILETDQAQLDFEAKKLQSTVKEKTYLISETGVLAD 148
           SSE TWMM PG DLFA IPFHAVHT+LE D+ +++FE+KKLQS VKEK   ISE G LAD
Sbjct: 61  SSEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKMEFESKKLQSLVKEKALFISELGALAD 120

Query: 149 KISPGVLKSLVALTDK 164
            ISPGV++SLVAL DK
Sbjct: 121 GISPGVIRSLVALEDK 136


>AT3G15351.2 | Symbols:  | unknown protein; Has 35333 Blast hits to
           34131 proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr3:5176726-5177340 FORWARD LENGTH=132
          Length = 132

 Score =  154 bits (388), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 71/116 (61%), Positives = 86/116 (74%)

Query: 1   MDETMKQFQXXXXXXXXXXXXXXXXRHQLVENDKLRNGNREALTVLRKKARTTKSSVPSP 60
           MD   K+F                 R+Q+VENDK RN NREALT LRK+ARTTK+SV SP
Sbjct: 1   MDLDPKKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSP 60

Query: 61  FESIMKGVAGTNSRPLVQEVCTTCGNHDSSEQTWMMFPGTDLFARIPFHAVHTILE 116
           F+S+MK + G++++PLVQEVC+TCG+HDSSE TWMM PG DLFA IPFHAVHT+LE
Sbjct: 61  FDSMMKDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLE 116