Miyakogusa Predicted Gene
- Lj3g3v0489450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0489450.1 Non Chatacterized Hit- tr|I1LVE2|I1LVE2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57203
PE,85.08,0,zf-RING_2,Zinc finger, RING-type; no description,Zinc
finger, RING/FYVE/PHD-type; RING/U-box,NULL; Z,CUFF.40899.1
(246 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 292 1e-79
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 292 1e-79
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 115 3e-26
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 99 3e-21
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 89 3e-18
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 82 4e-16
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 82 4e-16
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 82 4e-16
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 81 6e-16
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 81 6e-16
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 81 6e-16
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 80 1e-15
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 4e-15
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 78 5e-15
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 78 5e-15
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 75 4e-14
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 75 4e-14
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 75 4e-14
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 75 4e-14
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 75 4e-14
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 75 6e-14
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 73 1e-13
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 73 1e-13
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 72 2e-13
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 6e-13
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 8e-13
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 70 1e-12
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 65 5e-11
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 65 5e-11
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 65 5e-11
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 6e-11
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 7e-11
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 64 8e-11
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 63 1e-10
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 62 2e-10
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 62 2e-10
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 62 3e-10
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 62 5e-10
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 61 6e-10
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 60 2e-09
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 59 2e-09
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 2e-09
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 59 3e-09
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 3e-09
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 5e-09
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 5e-09
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 5e-09
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 58 6e-09
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 7e-09
AT5G52150.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 9e-09
AT1G36950.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 9e-09
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 1e-08
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 1e-08
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 1e-08
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 57 1e-08
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 1e-08
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 2e-08
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 2e-08
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 56 2e-08
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 56 3e-08
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 55 3e-08
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 55 4e-08
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 4e-08
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 55 4e-08
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 7e-08
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 8e-08
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 54 1e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 1e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 2e-07
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 53 2e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 2e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 2e-07
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 3e-07
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 52 3e-07
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 52 3e-07
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 3e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 52 3e-07
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 52 4e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 4e-07
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 5e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 5e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 5e-07
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 5e-07
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 5e-07
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 52 5e-07
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 5e-07
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 7e-07
AT4G00070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 7e-07
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 7e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 8e-07
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 50 1e-06
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 2e-06
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 2e-06
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 3e-06
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 3e-06
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 3e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 49 4e-06
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 4e-06
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 48 5e-06
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 5e-06
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 5e-06
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 48 6e-06
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 48 6e-06
AT1G77830.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 6e-06
AT2G20650.2 | Symbols: | RING/U-box superfamily protein | chr2:... 48 7e-06
AT2G20650.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 7e-06
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 8e-06
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 47 1e-05
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 292 bits (747), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 174/245 (71%), Gaps = 1/245 (0%)
Query: 3 DGRPMGVHYMDGGGFPYAVNENFVDFYQGHNQMPVNYAFSGSMPEQESAYWSMNMNPYKF 62
D RP+ + GFPYA +++DFY G Q P+NY + +M Q++ YW+MN N YKF
Sbjct: 4 DNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKF 63
Query: 63 GLSGPGNTSYYSSYEVNDHLPRMEINRTDWEY-PSVMITEEPATTDSPTRRDGTTSMQTI 121
G SG N S+Y SY++NDHL RM I RT+W+Y P V + ++P T + + + G T +
Sbjct: 64 GFSGSDNASFYGSYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDEHSE 123
Query: 122 PEECSPNHHESSSSQVIWQDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYK 181
EEC N H+ S QV WQDDIDPD MTYEEL++LGEAVGT+SRGLSQELI+ LPT KYK
Sbjct: 124 AEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYK 183
Query: 182 FSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFG 241
F S+F RK + +RCVICQ+ Y+ G++QM LPC H+YH ECI+KWLSINK CPVCN EVFG
Sbjct: 184 FGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFG 243
Query: 242 EDSTQ 246
E S
Sbjct: 244 EPSIH 248
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 292 bits (747), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/245 (55%), Positives = 174/245 (71%), Gaps = 1/245 (0%)
Query: 3 DGRPMGVHYMDGGGFPYAVNENFVDFYQGHNQMPVNYAFSGSMPEQESAYWSMNMNPYKF 62
D RP+ + GFPYA +++DFY G Q P+NY + +M Q++ YW+MN N YKF
Sbjct: 4 DNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPLNYDHAATMHPQDNLYWTMNTNAYKF 63
Query: 63 GLSGPGNTSYYSSYEVNDHLPRMEINRTDWEY-PSVMITEEPATTDSPTRRDGTTSMQTI 121
G SG N S+Y SY++NDHL RM I RT+W+Y P V + ++P T + + + G T +
Sbjct: 64 GFSGSDNASFYGSYDMNDHLSRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDTDEHSE 123
Query: 122 PEECSPNHHESSSSQVIWQDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYK 181
EEC N H+ S QV WQDDIDPD MTYEEL++LGEAVGT+SRGLSQELI+ LPT KYK
Sbjct: 124 AEECIANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETLPTKKYK 183
Query: 182 FSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFG 241
F S+F RK + +RCVICQ+ Y+ G++QM LPC H+YH ECI+KWLSINK CPVCN EVFG
Sbjct: 184 FGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEVFG 243
Query: 242 EDSTQ 246
E S
Sbjct: 244 EPSIH 248
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query: 131 ESSSSQVIWQDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKN 190
ES +SQ W D++DPD ++YEELL LG+ VGT+SRGLS + I LP+ +YK +
Sbjct: 227 ESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQNG 283
Query: 191 SEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDSTQ 246
+ + CVIC++ Y + + LPC H YH ECI WL INK CPVC+ EV S Q
Sbjct: 284 TNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQ 339
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 144 DPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKY--KFSSLF----KRK--NSEKRC 195
DP+NMTYEEL +LG++VG +GLSQE I L T KY K S + K+K + +C
Sbjct: 175 DPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKSWYCLHMKKKFVADDSQC 234
Query: 196 VICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
IC M Y +GD+ LPC H+YH +CI++WL NK C +C EV+
Sbjct: 235 SICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVY 279
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 145 PDNMTYEELLDLGEAVGTQSRGLSQ-ELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYR 203
PD ++YEEL+ LG+ +G ++RGL+ E+ L S Y FS KN RCV+CQM +
Sbjct: 114 PDQLSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFS---HNKNEIDRCVVCQMEFE 170
Query: 204 RGDQQMKL-PCNHLYHGECITKWLSINKKCPVC 235
+ + L PC+H YH ECITKWL K CP+C
Sbjct: 171 ERESLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKF-----SSLFKRKNSEKRCVI 197
+D DNM+YEELL LGE +G S GLS+E+I + ++K SS+ +N E C I
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEP-CCI 658
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
CQ Y GD L C H +H +CI +W+ I CP+C E
Sbjct: 659 CQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKF-----SSLFKRKNSEKRCVI 197
+D DNM+YEELL LGE +G S GLS+E+I + ++K SS+ +N E C I
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEP-CCI 658
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
CQ Y GD L C H +H +CI +W+ I CP+C E
Sbjct: 659 CQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKF-----SSLFKRKNSEKRCVI 197
+D DNM+YEELL LGE +G S GLS+E+I + ++K SS+ +N E C I
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEP-CCI 658
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
CQ Y GD L C H +H +CI +W+ I CP+C E
Sbjct: 659 CQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTEAL 701
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 146 DNMTYEELLDLGEAVGTQSRGLSQELIDM-LPTSKYKFSSLFKRKNSE-KRCVICQMTYR 203
D TYEELL + + G + GLS+E+ID L KY+ KR + E KRCVICQ +
Sbjct: 181 DIFTYEELLSITDETGDERTGLSEEVIDENLIRRKYE-----KRSDDETKRCVICQQKLK 235
Query: 204 RGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++ KL C H +H CI WL + KCP+CN EV
Sbjct: 236 DNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLCNREV 271
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDM-LPTSKYKFS----SLFKRKNSEKRCVI 197
+D DNM+YEELL LG+ +GT S LS+E + L S Y+ + S+ K+ + +C I
Sbjct: 418 LDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSI 477
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDS 244
CQ Y GD+ +PC H+YH C+ +WL + CP+C E S
Sbjct: 478 CQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 524
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDM-LPTSKYKFS----SLFKRKNSEKRCVI 197
+D DNM+YEELL LG+ +GT S LS+E + L S Y+ + S+ K+ + +C I
Sbjct: 418 LDIDNMSYEELLALGDKMGTVSTALSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSI 477
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDS 244
CQ Y GD+ +PC H+YH C+ +WL + CP+C E S
Sbjct: 478 CQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAEEEKS 524
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
+D DNM+YEELL LGE +G S GLS+E+I + SS + C +CQ Y
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626
Query: 203 RRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
GD L C H +H C+ +WL + CP+C
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNLCPIC 659
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDM-LPTSKYK-----FSSLFKRKNSEK--- 193
+D DNM+YEELL L E +GT S L++E I L TS Y+ + S+ K + K
Sbjct: 387 LDIDNMSYEELLALEERIGTVSTALTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDA 446
Query: 194 RCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
+C ICQ Y GD+ +L C H YH +C+ +WL I CP+C
Sbjct: 447 KCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPIC 488
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQE-LIDMLPTSKYK----FSSLFKRKNSEKRCVI 197
+D DNM+YEELL L E +GT S LS+E L+ L +S Y+ + K+ + +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
CQ Y GD+ LPC H YH C +WL + CP+C
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQE-LIDMLPTSKYK----FSSLFKRKNSEKRCVI 197
+D DNM+YEELL L E +GT S LS+E L+ L +S Y+ + K+ + +C I
Sbjct: 411 LDIDNMSYEELLALEEKMGTVSTALSEEALLKSLKSSIYRPNDESDDICLNKDDDVKCSI 470
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
CQ Y GD+ LPC H YH C +WL + CP+C
Sbjct: 471 CQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKF-----SSLFKRKNSEKRCVI 197
+D DNM+YEELL LGE +G S GLS+E+I + ++K SS+ +N E C I
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEP-CCI 658
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPV 234
CQ Y GD L C H +H +CI +W+ I CP+
Sbjct: 659 CQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPI 695
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEK--------- 193
+D ++M+YEELL L + +GT GLS E + L KR+ S +
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVK----------ELLKRRTSTRINLEEGPST 421
Query: 194 -----RCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C ICQ Y+ D+ L C H YH EC+ KWL I CP+C E
Sbjct: 422 DLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEAL 473
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEK--------- 193
+D ++M+YEELL L + +GT GLS E + L KR+ S +
Sbjct: 372 LDIEDMSYEELLALSDQIGTVKTGLSSEDVK----------ELLKRRTSTRINLEEGPST 421
Query: 194 -----RCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C ICQ Y+ D+ L C H YH EC+ KWL I CP+C E
Sbjct: 422 DLETDSCTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSEAL 473
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
+D DNM+YEELLDLGE +G+ + GLS I + + S + +++C IC Y
Sbjct: 442 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSY--QTEEQRKCAICLEEY 499
Query: 203 RRGDQQMKLP-CNHLYHGECITKWLSINKKCPVC 235
+ ++ ++ C H YHG CI KWLS+ CP+C
Sbjct: 500 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
+D DNM+YEELLDLGE +G+ + GLS I + + S + +++C IC Y
Sbjct: 442 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSY--QTEEQRKCAICLEEY 499
Query: 203 RRGDQQMKLP-CNHLYHGECITKWLSINKKCPVC 235
+ ++ ++ C H YHG CI KWLS+ CP+C
Sbjct: 500 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 533
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
+D DNM+YEELLDLGE +G+ + GLS I + + S + +++C IC Y
Sbjct: 495 LDIDNMSYEELLDLGERIGSVNTGLSDSAISSCLLATMYYPSY--QTEEQRKCAICLEEY 552
Query: 203 RRGDQQMKLP-CNHLYHGECITKWLSINKKCPVC 235
+ ++ ++ C H YHG CI KWLS+ CP+C
Sbjct: 553 KEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPIC 586
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKR-------- 194
+D + M+YEELL L E +GT + GL +E + ++ F++++S R
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C ICQ +++ ++ L C H YH EC+ KWL + CP+C E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEAL 487
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKR-------- 194
+D + M+YEELL L E +GT + GL +E + ++ F++++S R
Sbjct: 382 LDIEEMSYEELLALSERIGTVNTGLPEEDVKNHLKTRTCSGINFEKESSSPRTKDLETEP 441
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C ICQ +++ ++ L C H YH EC+ KWL + CP+C E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSEAL 487
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELI-DMLPTSKYKFSSLFKRKNSEKRCVICQMT 201
+D DNM+YEELL L E +G G+++E I + L KYK ++ K + C +CQ
Sbjct: 586 LDVDNMSYEELLALEERIGDVCTGVNEETISNRLKQRKYKSNT--KSPQDAEPCCVCQEE 643
Query: 202 YRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
Y G+ L C H +H +CI +WL CP+C
Sbjct: 644 YTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQ-ELIDMLPTSKYKFSSLFKRKNSEKRCVICQMT 201
+D D+M+YE+LL+LG+ +G + GL + E+ L K S +++C ICQ
Sbjct: 271 LDVDSMSYEQLLELGDRIGYVNTGLKESEIHRCLGKIKPSVSHTL----VDRKCSICQDE 326
Query: 202 YRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGE 242
Y R D+ +L C H +H C+ +WLS CPVC +G+
Sbjct: 327 YEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKKAAYGK 367
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 16/107 (14%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKN-------SEKRC 195
++ DNMTYE+LL+LGE +G + GL+++ I S L K K ++++C
Sbjct: 269 LNVDNMTYEQLLELGERIGHVNTGLTEKQIK---------SCLRKVKPCRQDTTVADRKC 319
Query: 196 VICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGE 242
+ICQ Y D+ +L C H +H +C+ +WL CPVC + +
Sbjct: 320 IICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCKTMAYNK 366
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELI-DMLPTSKYKFSSLFKRKNSEKRCVICQMT 201
+D DNMTYEELL L E +G GL++E I + L KYK S+ + + C +CQ
Sbjct: 541 LDVDNMTYEELLSLEERIGDVCTGLNEETISNRLKQQKYKSST--RSSQEVEPCCVCQEE 598
Query: 202 YRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
Y+ ++ +L C H +H +CI +WL CP+C
Sbjct: 599 YKEEEEIGRLECGHDFHSQCIKEWLKQKNLCPIC 632
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL + A GT RG + ID LPT K L ++S+ C +C+ + G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PCNH+YH +CI WL + CPVC E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL + A GT RG + ID LPT K L ++S+ C +C+ + G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PCNH+YH +CI WL + CPVC E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL + A GT RG + ID LPT K L ++S+ C +C+ + G +
Sbjct: 147 EELFEQLSA-GTTRRGPPPAPRSAIDALPTIKIAQRHL---RSSDSNCPVCKDEFELGSE 202
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PCNH+YH +CI WL + CPVC E+
Sbjct: 203 AKQMPCNHIYHSDCIVPWLVQHNSCPVCRQEL 234
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKW 225
GL++ I LPT K FK +K C+IC Y RGD+ LPC H YH +CI+ W
Sbjct: 165 GLTEGQISQLPTIK------FKPSLEDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHW 218
Query: 226 LSINKKCPVCNIEVF 240
L +K C VC EV
Sbjct: 219 LQNSKLCCVCQREVI 233
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 22/105 (20%)
Query: 162 TQSRGLSQELIDMLPTSKYKFSSL------------FKRKNSEKR---------CVICQM 200
+Q+RG + E I+ LP ++K S F S+K+ C IC
Sbjct: 301 SQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLT 360
Query: 201 TYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDST 245
Y +Q +LPC+H++H +C+ KWL IN CP+C EV GE S+
Sbjct: 361 RYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV-GESSS 404
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 23/136 (16%)
Query: 128 NHHESSSSQVIWQDDIDPDNMTYEELLD---------------LGEAVGTQS--RG---L 167
N+ E + ++ DDIDPD Y LD LG+ ++ RG
Sbjct: 251 NYIEQAEGIMLNPDDIDPDYYLYLSGLDEFDENHSGHYDADAILGQMFDDETGIRGNPPA 310
Query: 168 SQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
++ +I LP + L K N C +C+ ++ +LPC+H YHGECI WL
Sbjct: 311 AKSVIQDLPVVELAVEELDKGNNV---CAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLG 367
Query: 228 INKKCPVCNIEVFGED 243
I CPVC E+ +D
Sbjct: 368 IRNTCPVCRYELPTDD 383
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 28/109 (25%)
Query: 162 TQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKR--------------------------C 195
TQ RG + E I+ LPT K+K R N + C
Sbjct: 306 TQPRGATPESINALPTHKFKLKK--SRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVC 363
Query: 196 VICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDS 244
IC Y ++ +LPC+H +H EC+ KWL IN CP+C EV ++S
Sbjct: 364 CICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGEKNS 412
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 160 VGTQSRGLSQELIDMLPTSKYKF---SSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHL 216
VG+ +G S + I LP+ KYK +S + N++ C IC Y+ ++ KLPC+H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 217 YHGECITKWLSINKKCPVC 235
+H +C+ +WL I CP+C
Sbjct: 311 FHLKCVDQWLRIISCCPLC 329
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 160 VGTQSRGLSQELIDMLPTSKYKF---SSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHL 216
VG+ +G S + I LP+ KYK +S + N++ C IC Y+ ++ KLPC+H
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHR 310
Query: 217 YHGECITKWLSINKKCPVC 235
+H +C+ +WL I CP+C
Sbjct: 311 FHLKCVDQWLRIISCCPLC 329
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 176 PTSKYKFSSLFK------RKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSIN 229
P SK SL + +E C +C + G + ++PC H++HG+CI WLSI
Sbjct: 190 PASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIR 249
Query: 230 KKCPVCNIEV 239
CPVC E+
Sbjct: 250 NSCPVCRFEL 259
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 168 SQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
S+ I+ LP + + L +S+ C +C+ + ++PCNH+YH +CI WL+
Sbjct: 176 SKSAIEALPLIEIDPTHLLS--DSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLA 233
Query: 228 INKKCPVCNIEVFGEDST 245
I CPVC E+ ED T
Sbjct: 234 IRNSCPVCRHELPAEDLT 251
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 146 DNMTY---EELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
D++ Y EE D+ +V SQ I+ + T L K EK C IC+ +
Sbjct: 90 DDLVYNTDEEFADVMPSVQIGPPPASQSAIEAVRTVIITDEDLVK----EKVCAICKEEF 145
Query: 203 RRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
G++ +L C HLYH CI WL+I+ CP+C EV
Sbjct: 146 EVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 168 SQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
S+ ID LPT K L K+ +C +C + G ++PC H++H +C+ WL
Sbjct: 192 SKSAIDALPTVKVTKDML---KSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLE 248
Query: 228 INKKCPVCNIEVFGED 243
++ CPVC E+ +D
Sbjct: 249 LHNSCPVCRFELPTDD 264
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL++ + GT RG + ID LPT K L K+S+ C +C+ + +
Sbjct: 143 EELIEQ-LSSGTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PC+H+YH +CI WL + CPVC E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL++ + GT RG + ID LPT K L K+S+ C +C+ + +
Sbjct: 143 EELIEQ-LSSGTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PC+H+YH +CI WL + CPVC E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 151 EELLDLGEAVGTQSRG---LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
EEL++ + GT RG + ID LPT K L K+S+ C +C+ + +
Sbjct: 143 EELIEQ-LSSGTHHRGPPPAPKSSIDALPTIKITQKHL---KSSDSHCPVCKDEFELKSE 198
Query: 208 QMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
++PC+H+YH +CI WL + CPVC E+
Sbjct: 199 AKQMPCHHIYHSDCIVPWLVQHNSCPVCRKEL 230
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 171 LIDMLPTSKYKFSSL----FKRKNSEK---RCVICQMTYRRGDQQMKLPCNHLYHGECIT 223
+I + PTSK ++L + +N + C +C+ G++ ++LPCNH YH ECI
Sbjct: 278 VIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLPCNHKYHSECIV 337
Query: 224 KWLSINKKCPVCNIEVFGEDS 244
WL + CPVC E+ +D+
Sbjct: 338 PWLKVRNTCPVCRYELPTDDA 358
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 138 IWQDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVI 197
+ Q+ I+ +M ++LD G ++ S+E+++ LP + L K+ +E C I
Sbjct: 176 LMQELINGLDMIIPDILDDGGP--PRAPPASKEVVEKLPVIIFT-EELLKKFGAEAECCI 232
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGED 243
C+ GD+ +LPC H +H C+ WL + CP+C E+ +D
Sbjct: 233 CKENLVIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDD 278
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 155 DLGEAVGTQSRGLSQELIDMLPTSKYKFS----SLFKRKNSEKRCVICQMTYRRGDQQMK 210
D + V + GL++E+I P Y+ + SL K ++ C IC Y++ D
Sbjct: 85 DESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRV 144
Query: 211 LP-CNHLYHGECITKWLSINKKCPVCN 236
LP CNHL+H C+ WL ++ CPVC
Sbjct: 145 LPDCNHLFHDNCVDPWLRLHPTCPVCR 171
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
C IC+ + G+ +LPCNHLYH +CI WL+ + CP+C +E+
Sbjct: 96 CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCRVEL 140
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 130 HESSSSQVIWQD-DIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKR 188
H +SS ++ D D D+ YE LL L E + G S I+ LP S +
Sbjct: 532 HSITSSNLLHMDRDFTEDD--YELLLALDEN-NHRHGGASANRINNLPESTVQTD----- 583
Query: 189 KNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
N ++ CVIC T + GD LPC H +H +CI WL +K CPVC V
Sbjct: 584 -NFQETCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 172 IDMLPTSKYKFSSLFKRKNSEK----RCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
ID +PT + S L +S+ C +C+ + G+ +LPC+H+YH +CI WLS
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLS 201
Query: 228 INKKCPVCNIEV 239
+ CP+C E+
Sbjct: 202 DHNSCPLCRFEL 213
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 150 YEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRK------NSEKRCVICQMTYR 203
+E LL+ + + G+ + P SK SL + + SE C +C +
Sbjct: 150 FERLLEQLSQIEASATGIGRS--GNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFE 207
Query: 204 RGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
+ ++PC HL+H +CI WLSI CPVC E+
Sbjct: 208 TETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 243
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 157 GEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNH 215
G ++ T GLS+EL +MLP +K S F +S+ C +C Y+ D+ ++P C H
Sbjct: 66 GNSLSTIELGLSKELREMLPIVVFKES--FTVMDSQ--CSVCLGDYQPNDKLQQIPVCKH 121
Query: 216 LYHGECITKWLSINKKCPVCNIEVFGEDSTQ 246
+H +CI WL+ + CP+C + + S Q
Sbjct: 122 TFHMDCIDLWLTSHTTCPLCRLALIPSRSRQ 152
>AT5G52150.1 | Symbols: | RING/U-box superfamily protein |
chr5:21189988-21191303 REVERSE LENGTH=200
Length = 200
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNS----EKRCVICQMTYRRGDQQMKLPCNHLYHGEC 221
GL + +I LPT KY + + K + K C IC Y +GD+ LPC H +H +C
Sbjct: 131 GLPENIISGLPTQKYSRKTWWWSKKTFVPDRKECSICIADYEKGDKITILPCKHAFHKDC 190
Query: 222 ITKWLSINK 230
I WL NK
Sbjct: 191 IANWLKENK 199
>AT1G36950.1 | Symbols: | RING/U-box superfamily protein |
chr1:14009673-14010822 REVERSE LENGTH=226
Length = 226
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELID--MLPTSKYKFSSLFKRKNSEKRCVICQM 200
+D D+MTYE+LL L ++G ++ + ID T +F SL ++K C ICQ
Sbjct: 31 MDTDHMTYEQLLQLCNSMGYENSSVKASNIDRCFRNTKPSEFQSL-----ADKICCICQD 85
Query: 201 TYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
++R KL C H +H + W+ K+CPVC
Sbjct: 86 RFQRRAGVGKLNCGHNFHINSVKPWILTKKQCPVC 120
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 151 EELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEK-RCVICQMTYRRGDQQM 209
+E + L V + +R ++ L + P + + L + EK CVIC + + D +
Sbjct: 437 DEQISLRATVSS-TRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMET 495
Query: 210 KLPCNHLYHGECITKWLSINKKCPVC 235
+LPC H YH EC+ KWL I+ CP C
Sbjct: 496 ELPCKHKYHLECVEKWLKIHTSCPQC 521
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 168 SQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
S+ ++D LP + L + C IC+ ++ +LPC H YHGECI WL
Sbjct: 267 SKSVVDGLPDVELTIEEL---SSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIPWLG 323
Query: 228 INKKCPVCNIEVFGED 243
I CPVC E+ +D
Sbjct: 324 IRNTCPVCRHELPTDD 339
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C IC +Y G + + LPCNH +H CI KWL +N CP+C +
Sbjct: 292 CCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 169 QELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSI 228
+E++D LPT K S +C IC + +G + ++PC H +H CI WL +
Sbjct: 224 KEVVDNLPTVKISES---------LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL 274
Query: 229 NKKCPVCNIEVFGEDSTQ 246
+ CPVC E+ +D T+
Sbjct: 275 HSSCPVCRYELPPDDETK 292
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 169 QELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSI 228
+E++D LPT K S +C IC + +G + ++PC H +H CI WL +
Sbjct: 224 KEVVDNLPTVKISES---------LQCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLEL 274
Query: 229 NKKCPVCNIEVFGEDSTQ 246
+ CPVC E+ +D T+
Sbjct: 275 HSSCPVCRYELPPDDETK 292
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 150 YEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQM 209
YE L + + G S+ I L S + + + C +C+ G +
Sbjct: 327 YEMLFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVA 386
Query: 210 KLPCNHLYHGECITKWLSINKKCPVCNIEV 239
+LPC H YH ECI WL I CPVC E+
Sbjct: 387 ELPCRHKYHSECIVPWLGIRNTCPVCRFEL 416
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 168 SQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
S+ I+ LP+ K L N +C +C + G +LPC H+YH +CI WL
Sbjct: 200 SEPTINSLPSVKITPQHL---TNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLR 256
Query: 228 INKKCPVC 235
+N CP+C
Sbjct: 257 LNNSCPIC 264
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 160 VGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYH 218
+ T GLS+++ +MLP YK S + K + +C +C Y+ ++ ++P C H +H
Sbjct: 80 LSTAELGLSKDIREMLPVVIYKESFIVK----DSQCSVCLGDYQAEEKLQQMPSCGHTFH 135
Query: 219 GECITKWLSINKKCPVCNIEVF 240
ECI WL+ + CP+C + +
Sbjct: 136 MECIDLWLTSHTTCPLCRLSLI 157
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+ C IC Y G + +LPCNH +H CI KWL IN +CP+C +
Sbjct: 335 DAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 171 LIDMLPTSKYKFSSLFKRKNS--EKRCVICQMTYRRGDQQMKLP-CNHLYHGECITKWLS 227
++D LP +KFSS+ +R +S C +C + DQ LP C H +H +CI WL
Sbjct: 93 VLDSLPI--FKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 150
Query: 228 INKKCPVCNIEVFGEDS 244
N+ CP+C +F +S
Sbjct: 151 SNQTCPLCRSPLFASES 167
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 172 IDMLPTSKYKFSSLFKR-----KNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWL 226
I + P +K +SL ++ +S +RC IC + G + M LPC H + EC+ W
Sbjct: 147 ISLRPANKLVVNSLARKIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWF 206
Query: 227 SINKKCPVCNIEVFGED 243
N CP+C ++ ED
Sbjct: 207 ETNHDCPLCRFKLPCED 223
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 176 PTSKYKFSSL--FKRKNSEKR----CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSIN 229
P +K +L F+ +SE C +C+ G+ KLPC H YHG+CI WL
Sbjct: 232 PAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTR 291
Query: 230 KKCPVCNIEVFGEDS 244
CPVC ++ +D+
Sbjct: 292 NSCPVCRFQLETDDA 306
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGED 243
C IC+ + ++ +LPC HLYH CI WLS CP+C E+ +D
Sbjct: 350 CAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELPTDD 398
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 25/103 (24%)
Query: 158 EAVGTQSRGLSQE--------------------LIDMLPTSKYKFSSLFKRKNSEKRCVI 197
EA G + RG+SQ+ LI LP K++ ++ + C+I
Sbjct: 183 EAAGQEMRGISQDAATYHPGLYLTPAQTEAVEALIQELP--KFRLKAV---PDDCGECLI 237
Query: 198 CQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
C + G + LPC H +H ECI +WL +N KCP C VF
Sbjct: 238 CLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 176 PTSKYKFSS--LFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCP 233
P SK + + + E CVIC ++ + ++PC H +HG CI KWL + CP
Sbjct: 92 PASKASIDAMPIVEIDGCEGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCP 151
Query: 234 VCNIEV 239
VC E+
Sbjct: 152 VCRYEM 157
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 175 LPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQM-KLPCNHLYHGECITKWLSINKKCP 233
L Y ++ L E C IC Y G + KLPC+H +HG+CI KWL +N CP
Sbjct: 163 LLIDSYCYNYLNVATTEENGCAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCP 222
Query: 234 VC 235
+C
Sbjct: 223 LC 224
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 146 DNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKR------CVICQ 199
+ +++EEL + A+ Q+ P S +SL K K +K C +CQ
Sbjct: 74 EQLSFEELFNRLPAL--------QDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQ 125
Query: 200 MTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
+ G K+PC H+YH ECI WL CPVC E+
Sbjct: 126 DQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKEL 165
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKW 225
G+S+ L+ +P+ FSS + + C IC Y GD+ LPC H +H C+ W
Sbjct: 205 GMSRRLVKAMPS--LIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSW 262
Query: 226 L-SINKKCPVCN 236
L S CPVC
Sbjct: 263 LTSWRTFCPVCK 274
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 175 LPTSKYKFSSLFKRKNSEKR-CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCP 233
L S+ + FKR+ E++ C IC +++G+ + LPC H +H C+ WL N CP
Sbjct: 129 LKKSRGRLMEWFKRRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCP 188
Query: 234 VCNIEVF 240
C +++
Sbjct: 189 YCRTDIW 195
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+ C IC Y G + +LPC H +H C+ KWL IN CP+C +
Sbjct: 320 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNIL 368
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKL--PCNHLYHGECI 222
RGL E I P+ Y + + E CV+C ++ D+ ++L PC H++H +C+
Sbjct: 55 RGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFK-DDETLRLVPPCVHVFHADCV 113
Query: 223 TKWLSINKKCPVCNIEV 239
WLS + CP+C +V
Sbjct: 114 DIWLSHSSTCPICRAKV 130
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 170 ELIDMLPTSKYKFSSLFKRKNSE--KRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
+++D+LP L+ + SE +C IC + Y D LPC+H +H C+ KWL
Sbjct: 469 DVVDLLPIK------LYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLK 522
Query: 228 -INKKCPVCNIEVFGED 243
I++ CP+C ++ D
Sbjct: 523 EIHRVCPLCRGDICRHD 539
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTY 202
ID D + L + + +GL+Q+ I+ L + FSS + K+ + C IC ++
Sbjct: 154 IDGDPIFQLAGLQVTYECNKKPQGLTQDAINCL--HRQTFSSA-EVKSEMRDCSICLESF 210
Query: 203 RRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGE 242
+GD + LPC H +H C+ WL CP C + E
Sbjct: 211 TKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAIAKE 250
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 140 QDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQ 199
Q + + T+EEL + + G S+GL+ +L+D +P K + ++ C +C
Sbjct: 138 QSQMGAVDSTFEELSSIFDTGG--SKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCL 195
Query: 200 MTYRRGDQQMKLP-CNHLYHGECITKWLSINKKCPVCN 236
++ G+ LP C+H++H CI WL + CP+C
Sbjct: 196 QDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECIT 223
RGL+ +I LPT + + S C +C + D+ +LP C H++H +C+
Sbjct: 80 RGLNPTVIASLPT--FTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137
Query: 224 KWLSINKKCPVCNIEV 239
WL+ CPVC EV
Sbjct: 138 TWLTTCSTCPVCRTEV 153
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGEDSTQ 246
C IC +Y G + LPCNH +H CI KWL + CP+C + + Q
Sbjct: 307 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTTDQ 358
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 164 SRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKL--PCNHLYHGEC 221
+RGL E I+ PT Y + C +C + D+ ++L PC H++H +C
Sbjct: 104 ARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFE-DDETLRLMPPCCHVFHADC 162
Query: 222 ITKWLSINKKCPVCNIEV 239
+ WLS + CP+C ++
Sbjct: 163 VDVWLSEHSTCPLCRADL 180
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 146 DNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRG 205
D+ TY+ L + GL Q LID LP YK K C +C +
Sbjct: 100 DSDTYQR--QLQQLFHLHDSGLDQALIDALPVFLYK---EIKGTKEPFDCAVCLCEFSED 154
Query: 206 DQQMKLP-CNHLYHGECITKWLSINKKCPVCNIEVFG 241
D+ LP C+H +H +CI WL N CP+C +F
Sbjct: 155 DKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 153 LLDLGEAVGTQSRGLSQELIDMLPTSKYK--------FSSLFKRKNSEKRCVICQMTYRR 204
LL +G+ R S + I LP+ K+K S + C IC Y+
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 205 GDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
++ KLPC+H +H +C+ +WL I CP+C
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLC 337
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 153 LLDLGEAVGTQSRGLSQELIDMLPTSKYK--------FSSLFKRKNSEKRCVICQMTYRR 204
LL +G+ R S + I LP+ K+K S + C IC Y+
Sbjct: 247 LLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCICLAKYKD 306
Query: 205 GDQQMKLPCNHLYHGECITKWLSINKKCPVC 235
++ KLPC+H +H +C+ +WL I CP+C
Sbjct: 307 KEEVRKLPCSHKFHSKCVDQWLRIISCCPLC 337
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 164 SRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECI 222
S GLS + LP K+ S + R S+ CV+C +R+G LP C H++H +C+
Sbjct: 81 SDGLSSRFVKKLPQFKFSEPSTYTRYESD--CVVCFDGFRQGQWCRNLPGCGHVFHRKCV 138
Query: 223 TKWLSINKKCPVCNIEV 239
WL CP+C V
Sbjct: 139 DTWLLKASTCPICRARV 155
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 167 LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITKW 225
+ Q ID LP YK ++ ++ C +C + D+ LP C+H +H ECI W
Sbjct: 96 IDQSFIDALPLLHYK--TMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTW 153
Query: 226 LSINKKCPVC 235
L N CP+C
Sbjct: 154 LLTNSTCPLC 163
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITK 224
G+ Q ID LP YK S+ KN C +C + D+ LP C+H +H +CI
Sbjct: 107 GVDQSFIDTLPVFHYK--SIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 225 WLSINKKCPVC 235
WL + CP+C
Sbjct: 165 WLLSHSTCPLC 175
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 160 VGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYH 218
V +RGL +++ PT Y K E C IC + + LP C+H++H
Sbjct: 93 VNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFH 152
Query: 219 GECITKWLSINKKCPVCN 236
CI WL + CPVC
Sbjct: 153 PHCIDAWLEAHVTCPVCR 170
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+KRC +C + + M PC H++H ECI WL +CPVC +
Sbjct: 169 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVIL 217
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 148 MTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
M E + L G+ ++G+ ++ + M P Y S ++ CVIC + G+Q
Sbjct: 90 MISEPVPSLSSTRGSSNKGIKKKALRMFPVVSY--SPEMNLPGLDEECVICLSDFVSGEQ 147
Query: 208 QMKLP-CNHLYHGECITKWLSINKKCPVC 235
LP CNH +H CI KWL + CP C
Sbjct: 148 LRLLPKCNHGFHVRCIDKWLQQHLTCPKC 176
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 169 QELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSI 228
+E ++ LPT K +C +C + +G + ++PC H +H CI WL +
Sbjct: 242 KEAVEALPTVKIM---------EPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLEL 292
Query: 229 NKKCPVCNIEV 239
+ CPVC E+
Sbjct: 293 HSSCPVCRFEL 303
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITK 224
G+ Q LID LP YK S+ K S C +C + D+ LP C+H +H ECI
Sbjct: 99 GVDQSLIDTLPVFHYK--SIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 225 WLSINKKCPVC 235
WL + CP+C
Sbjct: 157 WLLSHSTCPLC 167
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+ C IC Y G + +LPC H +H C+ KWL IN CP+C +
Sbjct: 350 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 398
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 139 WQDDIDPDNMTYEELLDL-GEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVI 197
WQ I +++YEE D+ GE ++RGLS + + LP Y SS R+ C I
Sbjct: 127 WQLRIS--DVSYEEREDVYGE---LEARGLSGDSLRKLPC--YIMSSEMVRRQV-THCTI 178
Query: 198 CQMTYRRGDQQMKLP-CNHLYHGECITKWLSINKKCPVCNIEV 239
C + G+ LP C+H +H C+ KWL + CP+C V
Sbjct: 179 CLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAV 221
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 157 GEAVGTQ--SRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKL--P 212
GE T+ SRGL +++I+ P+ Y K C IC + ++ ++L P
Sbjct: 88 GEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFE-DEETLRLMPP 146
Query: 213 CNHLYHGECITKWLSINKKCPVCNIEV 239
C+H +H CI WLS CPVC +
Sbjct: 147 CSHAFHASCIDVWLSSRSTCPVCRASL 173
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGE 242
C IC G +MKLPC+H++H +CI WL N CP+C + G+
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTKAHGK 221
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+ C IC Y G + +LPC H +H C+ KWL IN CP+C +
Sbjct: 279 DAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNIL 327
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECIT 223
RG+ +++I+ P Y FK N C IC + + +P C+H +H CI
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 224 KWLSINKKCPVC 235
+WLS CPVC
Sbjct: 150 EWLSSRSTCPVC 161
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 160 VGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYH 218
+ T GLS+++ +MLP YK S ++ +C +C Y+ ++ ++P C H +H
Sbjct: 66 LSTAELGLSKDIREMLPIVIYKESFTV----NDTQCSVCLGDYQAEEKLQQMPSCGHTFH 121
Query: 219 GECITKWLSINKKCPVCNIEVF 240
ECI WL+ + CP+C + +
Sbjct: 122 MECIDLWLTSHTTCPLCRLSLI 143
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 161 GTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHG 219
T +RGL E I+ PT Y K C IC + + LP C+H++H
Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHP 149
Query: 220 ECITKWLSINKKCPVCN 236
CI WL + CPVC
Sbjct: 150 HCIGAWLQGHVTCPVCR 166
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+KRC +C + + M PC H++H ECI WL +CPVC +
Sbjct: 141 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCRFVIL 189
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 155 DLGEAVGTQ--SRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP 212
DL +V +Q RGL +I LPT F K + C +C D LP
Sbjct: 62 DLSFSVVSQPPKRGLDSLVIASLPT----FVVGIKNDVAGTECAVCLSLLEEKDNARMLP 117
Query: 213 -CNHLYHGECITKWLSINKKCPVCNIEV 239
C H++H C+ WL+ CPVC E
Sbjct: 118 NCKHVFHVSCVDTWLTTQSTCPVCRTEA 145
>AT4G00070.1 | Symbols: | RING/U-box superfamily protein |
chr4:29672-31426 REVERSE LENGTH=179
Length = 179
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 143 IDPDNMTYEELLDLGEAVGTQSRGLSQELID--MLPTSKYKFSSLFKRKNSEKRCVICQM 200
+D D+MTYE+LL L +G ++ G+ ID + T +F SL ++K C ICQ
Sbjct: 95 MDTDHMTYEQLLQLCNNMGYENSGVKASNIDRCLRNTKPSEFQSL-----ADKICCICQD 149
Query: 201 TYRRGDQQMKLPCNHLYHGECITKWLSINK 230
+++ KL C H +H C+ W+ K
Sbjct: 150 GFQKRAGVGKLNCGHNFHVNCVKPWILTKK 179
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Query: 129 HHESSSSQVIWQDDIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKR 188
HH++SSS+ + N E + + T GL++ +I + KYK F
Sbjct: 85 HHQTSSSETLNL------NHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD 138
Query: 189 KNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITKWLSINKKCPVCNIEVFG 241
+ C +C + + LP CNH +H CI WL + CP+C V G
Sbjct: 139 GSD---CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG 189
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECIT 223
RGL + + LP Y+++ K++N + CVIC + G+ +P C H++H +C+
Sbjct: 114 RGLDSQAVRSLPV--YRYTKAAKQRNED--CVICLSDFEEGETVKVIPHCGHVFHVDCVD 169
Query: 224 KWLSINKKCPVCN 236
WLS CP+C
Sbjct: 170 TWLSSYVTCPLCR 182
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 177 TSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ-QMKLPCNHLYHGECITKWLSINKKCPVC 235
T +SS + +E C IC + +G+ Q+ C H +H +CI KWLS CP C
Sbjct: 89 TPTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC 148
Query: 236 NIEVFGEDS 244
+F + S
Sbjct: 149 RTSIFSQHS 157
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 148 MTYEELLDLGEAVGT---QSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRR 204
M Y D G + T Q+RGL +I+ PT +Y + C +C +
Sbjct: 94 MDYGNPNDAGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFED 153
Query: 205 GDQQMKLP-CNHLYHGECITKWLSINKKCPVCNIEVF 240
+ +P C H++H CI WL + CP+C ++
Sbjct: 154 DETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLI 190
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKR-------CVICQMTYRRGDQQMKLP-CNHLY 217
GL +I LP Y ++ + K C +C + + GD LP C H +
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 218 HGECITKWLSINKKCPVCNIEVFG 241
H ECI +WL + CP+C + G
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILG 203
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKR-------CVICQMTYRRGDQQMKLP-CNHLY 217
GL +I LP Y ++ + K C +C + + GD LP C H +
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 218 HGECITKWLSINKKCPVCNIEVFG 241
H ECI +WL + CP+C + G
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILG 203
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 178 SKYKFSSL---FKRKNSEK---RCVICQMTYRRGDQQMKLP-CNHLYHGECITKWLSINK 230
+ ++ SSL F R++S K C IC +GD+ LP CNH +H ECI W +
Sbjct: 104 TSFELSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHS 163
Query: 231 KCPVCNIEVFG 241
CP+C V G
Sbjct: 164 TCPICRNTVLG 174
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 148 MTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQ 207
M E + L G+ ++G++++ + M P Y S + CVIC + G+Q
Sbjct: 91 MISEPIAGLSTPCGSSNKGINKKALRMFPVVSY--SPEMNLPGLGEECVICLSDFVSGEQ 148
Query: 208 QMKLP-CNHLYHGECITKWLSINKKCPVC 235
LP C+H +H CI KWL + CP C
Sbjct: 149 IRMLPKCHHGFHVRCIDKWLQQHLTCPKC 177
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 195 CVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEV 239
C IC + +GD ++PC H +H +C+ +WL + CP+C E+
Sbjct: 109 CAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMCRYEM 153
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 170 ELIDMLPTSKYKFSSLFKRKNSE--KRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLS 227
+++D+LP L+ + SE +C IC + Y D LPC+H +H C+ KWL
Sbjct: 469 DVVDLLPIK------LYTKSQSEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLK 522
Query: 228 --INKKCPVCNIEVFGED 243
++ CP+C ++ D
Sbjct: 523 EIHSRVCPLCRGDICRHD 540
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 176 PTSKYKFSSL--FKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCP 233
P +K +L K ++S +C +C + G + ++PC H +H +C+ WL ++ CP
Sbjct: 204 PATKEAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCP 263
Query: 234 VC 235
VC
Sbjct: 264 VC 265
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 176 PTSKYKFSSL--FKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCP 233
P +K +L K ++S +C +C + G + ++PC H +H +C+ WL ++ CP
Sbjct: 204 PATKEAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCP 263
Query: 234 VC 235
VC
Sbjct: 264 VC 265
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 176 PTSKYKFSSL--FKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCP 233
P +K +L K ++S +C +C + G + ++PC H +H +C+ WL ++ CP
Sbjct: 204 PATKEAVEALAMVKIEDSLLQCSVCLDDFEIGMEAKEMPCKHKFHSDCLLPWLELHSSCP 263
Query: 234 VC 235
VC
Sbjct: 264 VC 265
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 175 LPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPV 234
LP ++ + +R C IC+ ++ +LPC H YH ECI+ WLS CP+
Sbjct: 79 LPVVEFTAEEMMER--GLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPL 136
Query: 235 C--NIEV 239
C N+E+
Sbjct: 137 CRHNVEL 143
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 169 QELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSI 228
++L+ +PT Y + + + ++ C IC YR G+ LPC H YH CI WL
Sbjct: 92 KDLLQSMPTEVY--TGVLEEGSTSVTCAICIDDYRVGEILRILPCKHKYHAVCIDSWLGR 149
Query: 229 NKK-CPVCN 236
+ CPVC
Sbjct: 150 CRSFCPVCK 158
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 167 LSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWL 226
+ + +I +PT+ F+ + + C IC Y +GD+ LPC+H +H C+ WL
Sbjct: 208 MPKSMIIRMPTTI--FNGICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWL 265
Query: 227 SINKK-CPVCN 236
K CPVC
Sbjct: 266 GQRKSFCPVCK 276
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITK 224
GL ++ I P Y S K + C IC Y+ +LP CNHL+H +CI
Sbjct: 121 GLDEDTIQSYPKILY---SEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 177
Query: 225 WLSINKKCPVC 235
WL +N CPVC
Sbjct: 178 WLRLNPTCPVC 188
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECIT 223
+G+ ++ + MLP Y S + CVIC + G+Q LP CNH +H CI
Sbjct: 102 KGIKKKALKMLPVVNY--SPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCID 159
Query: 224 KWLSINKKCPVC 235
KWL+ + CP C
Sbjct: 160 KWLTQHMTCPKC 171
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 176 PTSKYKFSSLFKRKNSE-----KRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINK 230
P SK SL ++ + +RC IC + G + LPC H + EC KW N
Sbjct: 251 PASKLVVKSLTRKIYDKINYTGERCTICLEEFNAGGILVALPCGHDFDDECAVKWFETNH 310
Query: 231 KCPVCNIEV 239
CP+C E+
Sbjct: 311 FCPLCRYEL 319
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 149 TYEELLDLGEAVGTQSRGLSQ----ELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRR 204
+ LD+ G+ S G + + DMLP +K F + R N + C ICQ +
Sbjct: 23 SVRSFLDIRRLFGSASSGSTIIDKIPMDDMLPATK--FEDISSRVNPPESCRICQDEFDG 80
Query: 205 GDQQMKLP-CNHLYHGECITKWLSINK-KCPVCNIEV 239
GD+ L C H+YH CI +W+ +K CP+C +
Sbjct: 81 GDEVRCLRNCVHVYHKTCIDRWIQDDKMTCPLCRTPI 117
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKL---PCNHLYHGEC 221
RGL +E+I+ PT Y K C IC + DQ+ PC+H +H C
Sbjct: 93 RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFE--DQETLRWMPPCSHTFHANC 150
Query: 222 ITKWLSINKKCPVCN 236
I WLS CPVC
Sbjct: 151 IDVWLSSWSTCPVCR 165
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 164 SRGLSQELIDMLPTSKYKFSSLF-----KRKNSEKRCVICQMTYRRGDQQMKLP-CNHLY 217
+RGL + I +P K+K + + KNS++ C +C ++ ++ +P C H++
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQE-CSVCLNEFQEDEKLRIIPNCCHVF 157
Query: 218 HGECITKWLSINKKCPVCNIEVFGEDS 244
H +CI WL N CP+C V E S
Sbjct: 158 HIDCIDIWLQGNANCPLCRTSVSCEAS 184
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 162 TQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGEC 221
T++ L +L+ LP + F+ K E C IC YR G+ LPC H +H C
Sbjct: 202 TRTIRLDAKLVHTLPC--FTFTDSAHHKAGET-CAICLEDYRFGESLRLLPCQHAFHLNC 258
Query: 222 ITKWLS-INKKCPVCNIEVFGE 242
I WL+ CPVC ++ E
Sbjct: 259 IDSWLTKWGTSCPVCKHDIRTE 280
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 165 RGLS---QELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGEC 221
+GLS ++L+ +PT Y S + + ++ C IC Y G++ LPC H YH C
Sbjct: 202 QGLSCMPRDLLQSMPTEVY--SGVLEESSTSVTCAICIDDYCVGEKLRILPCKHKYHAVC 259
Query: 222 ITKWLSINKK-CPVCN 236
I WL + CPVC
Sbjct: 260 IDSWLGRCRSFCPVCK 275
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKL--PCNHLYHGECIT 223
GL +I+ PT Y + + C IC + + GD ++L C H++H ECI
Sbjct: 81 GLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFD-GDHVLRLLTTCYHVFHQECID 139
Query: 224 KWLSINKKCPVCN 236
W ++ CPVC
Sbjct: 140 LWFESHRTCPVCR 152
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 176 PTSKYKFSSLFKRKNSEK-RCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPV 234
P K +L K E +C +C + G + +PC H +H +C+ WL ++ CPV
Sbjct: 203 PAKKEAVEALATVKIEETLQCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPV 262
Query: 235 CNIEVFGEDS 244
C ++ +++
Sbjct: 263 CRYQLPADEA 272
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 146 DNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRG 205
D T + +LDL GL + +I+ P S R N+ C IC Y
Sbjct: 46 DEATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAR 104
Query: 206 DQQMKLP-CNHLYHGECITKWLSINKKCPVCN 236
+ +P CNH +H +C+ +WL + CP+C
Sbjct: 105 EPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 176 PTSKYKFSSLFKR------KNSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSIN 229
P SK SL ++ ++ + C+IC + G + + LPC H + EC+ KW N
Sbjct: 34 PASKLVVKSLARKIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKWFETN 93
Query: 230 KKCPVCNIEV 239
CP+C ++
Sbjct: 94 HSCPLCRFKL 103
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 162 TQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLPCNHLYHGEC 221
T++ L +L+ LP + F+ K E C IC YR G+ LPC H +H C
Sbjct: 202 TRTIRLDAKLVHTLPC--FTFTDSAHHKAGET-CAICLEDYRFGESLRLLPCQHAFHLNC 258
Query: 222 ITKWLS-INKKCPVCNIEVFGE 242
I WL+ CPVC ++ E
Sbjct: 259 IDSWLTKWGTSCPVCKHDIRTE 280
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 190 NSEKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVF 240
+ + C IC Y + +LPC H +H C+ KWL IN CP+C +
Sbjct: 320 HEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNIL 370
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 192 EKRCVICQMTYRRGDQQMKLPCNHLYHGECITKWLSINKKCPVCNIEVFGED 243
E CVIC+ G ++PC H +H +CI WLS CP C ++ +D
Sbjct: 211 EVECVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLPTDD 262
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 166 GLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECITK 224
G+ + +I+ LP ++F +L K+ + C +C + + LP C H +H EC+
Sbjct: 66 GIDRSVIESLPV--FRFGALSGHKDGLE-CAVCLARFEPTEVLRLLPKCKHAFHVECVDT 122
Query: 225 WLSINKKCPVCNIEVFGED 243
WL + CP+C V ED
Sbjct: 123 WLDAHSTCPLCRYRVDPED 141
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 165 RGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGECIT 223
+GL +I +P + + + ++ E+ CVIC + GD KL C H +H ECI
Sbjct: 110 KGLDSSVISSIPL--FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECID 167
Query: 224 KWLSINKKCPVCNIEVFG 241
WLS + CP+C V
Sbjct: 168 MWLSSHSTCPLCRSPVLA 185
>AT1G77830.1 | Symbols: | RING/U-box superfamily protein |
chr1:29267160-29267752 REVERSE LENGTH=185
Length = 185
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 191 SEKRCVICQMTYRRGDQQM-KLPCNHLYHGECITKWLSINKKCPVCNIEV 239
S + C +CQ Y + D+ + K CNH+++G CI+++L +CPVC++E+
Sbjct: 125 SSESCCLCQKGYPKEDEIVHKTKCNHIFYGTCISRYLLHTPRCPVCSVEL 174
>AT2G20650.2 | Symbols: | RING/U-box superfamily protein |
chr2:8903954-8907017 REVERSE LENGTH=559
Length = 559
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 174 MLPTSKYKFSSLFKRKNSEKRCVICQMTY---RRGDQQMKLPCNHLYHGECITKWLSINK 230
+LP + L N + CVIC T R + M PC H++H C+ +W+ I
Sbjct: 488 LLPEKYSYYRRLDHNVNRSRDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDIKM 547
Query: 231 KCPVC 235
+CP C
Sbjct: 548 ECPTC 552
>AT2G20650.1 | Symbols: | RING/U-box superfamily protein |
chr2:8903954-8907017 REVERSE LENGTH=559
Length = 559
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 174 MLPTSKYKFSSLFKRKNSEKRCVICQMTY---RRGDQQMKLPCNHLYHGECITKWLSINK 230
+LP + L N + CVIC T R + M PC H++H C+ +W+ I
Sbjct: 488 LLPEKYSYYRRLDHNVNRSRDCVICMTTIDLRHRINDCMVTPCEHIFHSGCLQRWMDIKM 547
Query: 231 KCPVC 235
+CP C
Sbjct: 548 ECPTC 552
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 162 TQSRGLSQELIDMLPTSKYKFSSLFKRKNSEKRCVICQMTYRRGDQQMKLP-CNHLYHGE 220
T RGL + +I+ PT Y + C +C + + +P C H++H +
Sbjct: 63 TAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHAD 122
Query: 221 CITKWLSINKKCPVCNIEV 239
C++ WLS + CP+C +++
Sbjct: 123 CVSVWLSDHSTCPLCRVDL 141
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 213 CNHLYHGECITKWLSINKKCPVCNIEVFGED 243
C H++HG+CI KWLS + CP+C +E+ +D
Sbjct: 130 CAHVFHGDCIDKWLSTSNNCPLCGVEIMDDD 160