Miyakogusa Predicted Gene
- Lj3g3v0477980.4
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0477980.4 tr|D7L781|D7L781_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,25.11,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.40897.4
(357 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 4e-99
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 3e-69
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 244 7e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 218 8e-57
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 216 2e-56
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 212 3e-55
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 1e-54
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 207 8e-54
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 207 1e-53
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 206 2e-53
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 202 2e-52
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 202 3e-52
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 201 5e-52
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 5e-52
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 201 7e-52
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 1e-51
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 2e-51
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 7e-51
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 7e-51
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 197 1e-50
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 1e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 7e-50
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 194 9e-50
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 2e-49
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 3e-49
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 192 4e-49
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 4e-49
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 5e-49
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 2e-48
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 5e-48
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 7e-48
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 9e-48
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 185 3e-47
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 4e-47
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 6e-47
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 7e-47
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 183 2e-46
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 183 2e-46
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 7e-46
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 1e-45
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 3e-45
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 1e-44
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 177 1e-44
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 177 1e-44
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 2e-44
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 6e-44
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 8e-44
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 5e-43
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 169 2e-42
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 169 2e-42
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 2e-42
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 6e-42
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 168 7e-42
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 8e-42
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 1e-41
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 167 2e-41
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 165 5e-41
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 7e-41
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 1e-40
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 2e-40
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 3e-40
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 6e-40
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 2e-39
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 159 2e-39
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 3e-39
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 5e-39
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 7e-39
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 8e-39
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 2e-38
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 2e-38
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 156 2e-38
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 154 7e-38
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 154 8e-38
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 1e-37
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 5e-37
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 5e-37
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 7e-37
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 7e-37
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 9e-37
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 149 2e-36
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 5e-36
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 8e-36
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 8e-36
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 4e-35
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 7e-35
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 9e-35
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 2e-34
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 3e-34
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 140 1e-33
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 5e-33
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 138 5e-33
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 3e-32
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 6e-32
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 132 3e-31
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 4e-31
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 132 4e-31
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 129 3e-30
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 5e-30
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 5e-29
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 6e-28
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 8e-26
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 1e-24
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 100 2e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 4e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 4e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 4e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 6e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 1e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 2e-16
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 83 4e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 1e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 81 1e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 80 1e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 2e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 78 8e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 73 4e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 73 4e-13
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 8e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 9e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 2e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 70 3e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 7e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 8e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 68 9e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 64 1e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 1e-10
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 62 5e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 9e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 58 8e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 58 8e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 1e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 6e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 6e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 53 4e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 50 2e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 48 9e-06
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 358 bits (918), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 170/324 (52%), Positives = 223/324 (68%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H D +LV+L+L+ + F T + LLF T PN FL+N++I G V+N FH+ + L+ S
Sbjct: 42 HHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLS 101
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ + G + FTF VLKAC R LG LHSLVVK GF DV T LL YS G
Sbjct: 102 IRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGR 161
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L DA K+FD+IP+++V +WTAL GY+ SG EA+DLF+ ++EMG++PDS +V VL A
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C +GDL SG WI +YM E + +N FV TTLVN+YAKCG ME+AR VFD M+E+D+V W
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
S MIQGYASN P+E ++LF +M +ENL+PD F++VG LS+CA LGAL LG L+D
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR 341
Query: 334 EEFLSNPVLGTALIDLYAKCGSMG 357
EFL+N + ALID+YAKCG+M
Sbjct: 342 HEFLTNLFMANALIDMYAKCGAMA 365
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 137/268 (51%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + + W + G + + I L+ M + G P+S+ VL AC +
Sbjct: 168 LFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G + + + + FV T L+ Y+KCG + AR VFD + EK++ +W+ +I G
Sbjct: 228 LDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQG 287
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+ + +E ++LF +L+ L+PD ++V L +CA LG L G W + N
Sbjct: 288 YASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+F+ L++MYAKCG+M VF M E+D+V +A I G A NG + + +F + +K
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNR 326
+ PD +G+L C G +Q G R
Sbjct: 408 LGISPDGSTFLGLLCGCVHAGLIQDGLR 435
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD + W+TMI+G N +GI+L+ M Q+ P+ F+ L
Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+CA L LG SL+ + F+ ++F+ L+ Y+KCG + +VF ++ EK++
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRY 229
A I G +++G + + +F ++G+ PD + + +L C G + G R+ +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF-DGMLERDVVCWSAMIQG 279
L R V +V+++ + G +++A R+ D + + + W A++ G
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 5/322 (1%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDG-IQLYH 92
+ N+L+ + G+ ++ LF T PN + +N MIRG+ + H+ + LY
Sbjct: 66 EKPNFLIP----KAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYR 121
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M G P+ FT+ FV ACA+L +G ++HS + K G DV + L+ Y+KCG
Sbjct: 122 RMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCG 181
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ ARK+FD+I E++ SW ++I GYSE+G ++A+DLFR + E G PD LV +LG
Sbjct: 182 QVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLG 241
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
AC+ LGDL +GR ++ + + F+G+ L++MY KCG ++ ARRVF+ M+++D V
Sbjct: 242 ACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVA 301
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+AMI Y+ NG EA +LFFEM+K + PD + VLSAC +GAL+LG + +
Sbjct: 302 WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 333 AEEFLSNPVLGTALIDLYAKCG 354
N + T L+D+Y KCG
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCG 383
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 3/276 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + + LFD+ +T WN+MI G + D + L+ M ++GF P+ T +L
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC+ L G L + + F+ + L+ Y KCG L AR+VF+ + +K+
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV 300
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+WTA+I YS++G EA LF + + G+ PD+ L VL AC +G L G+ I+ +
Sbjct: 301 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHA 360
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
SE L N++V T LV+MY KCG +EEA RVF+ M ++ W+AMI YA G +EAL
Sbjct: 361 SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEAL 420
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
LF M ++ P +GVLSAC G + G R
Sbjct: 421 LLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCR 453
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 14/255 (5%)
Query: 106 FTFVLKACA---RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
F F+LK C +L LHS V K F+ VE G + S +F
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHS-VEKPNFLIPKAVELGDFNYSSF---------LFS 89
Query: 163 DIPEKNVASWTALICGYSES-GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG 221
E N S+ +I G + + E A+ L+R + GL+PD V ACA+L ++G
Sbjct: 90 VTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIG 149
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
GR + + + GL R+V + +L+ MYAKCG + AR++FD + ERD V W++MI GY+
Sbjct: 150 VGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
G ++A+ LF +M++E PD +V +L AC+ LG L+ G + + ++ +
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 342 LGTALIDLYAKCGSM 356
LG+ LI +Y KCG +
Sbjct: 270 LGSKLISMYGKCGDL 284
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 244 bits (623), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 191/321 (59%), Gaps = 2/321 (0%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
+L++ ++ +S FG+ + +FD P F WN +IRG N+ F D + +Y +M
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
P+SFTF +LKAC+ L H +G +H+ V + GF DVFV+ GL+ Y+KC L A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 158 RKVFD--DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
R VF+ +PE+ + SWTA++ Y+++G EA+++F + +M ++PD LV VL A
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
L DL GR I + + GL + +L MYAKCG + A+ +FD M +++ W+A
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI GYA NG REA+ +F EM +++RPD ++ +SACA++G+L+ + +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
+ + + +ALID++AKCGS+
Sbjct: 354 YRDDVFISSALIDMFAKCGSV 374
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 140/254 (55%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
W ++ N + ++++ M + P+ VL A L G ++H+ VV
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
K G + + L Y+KCG + A+ +FD + N+ W A+I GY+++G EA+D
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
+F ++ +RPD+ ++ + ACA++G L R + Y+ S +VF+ + L++M+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KCGS+E AR VFD L+RDVV WSAMI GY +G REA+ L+ M++ + P+ +G
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 311 VLSACARLGALQLG 324
+L AC G ++ G
Sbjct: 430 LLMACNHSGMVREG 443
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 2/235 (0%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H+ ++ G F+ T L+ S G + AR+VFDD+P + W A+I GYS +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
++A+ ++ + + PDS H+L AC+ L L GR++ + G +VFV
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG 159
Query: 245 LVNMYAKCGSMEEARRVFDG--MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
L+ +YAKC + AR VF+G + ER +V W+A++ YA NG P EAL++F +M+K +++
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
PD A+V VL+A L L+ G + P L +L +YAKCG +
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 6/272 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G K+LFD+ +PN LWN MI G N + I ++H M + P++ + T +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
ACA++ +++ V ++ + DVF+ + L+ ++KCG + AR VFD +++V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
W+A+I GY G EA+ L+R + G+ P+ + +L AC G + G W M
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASN---GLP 286
++ ++ ++++ + G +++A V M ++ V W A++ + L
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARL 318
A Q F + N + + L A ARL
Sbjct: 511 EYAAQQLFSIDPSN--TGHYVQLSNLYAAARL 540
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 218 bits (554), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 190/334 (56%), Gaps = 11/334 (3%)
Query: 34 HQDNYLVSLVLRSSFHFGNT----HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQ 89
H++ Y +S +L + H N H+ +FD PN+F+++TMIR + H G++
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 90 LYHSM---HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG-FVGDVFVETGLL 145
+ M ++ P TF F++ AC + C F +G +H VVK G F+ D V+TG+L
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVL 159
Query: 146 GFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
Y + L DARKVFD+IP+ +V W L+ GY GL E +++FR +L GL PD
Sbjct: 160 RIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEF 219
Query: 206 NLVHVLGACARLGDLGSGRWIDRYM-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ L ACA++G L G+WI ++ +S + +VFVGT LV+MYAKCG +E A VF
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK 279
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN-LRPDCFAMVGVLSACARLGALQL 323
+ R+V W+A+I GYA+ G ++A+ +++E+ ++PD ++GVL+ACA G L+
Sbjct: 280 LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEE 339
Query: 324 GNRAKGLMDAE-EFLSNPVLGTALIDLYAKCGSM 356
G M+A E + ++DL + G +
Sbjct: 340 GRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 198/390 (50%), Gaps = 50/390 (12%)
Query: 9 LMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLR---SSFHFGNTHHPKLLFDQTHN 65
L+ K+ +++ H H NY +S ++ S HF + +F
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGL--HNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN +WNTM RG + ++LY M G P S+TF FVLK+CA+ F G +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD----------------------- 162
H V+K G D++V T L+ Y + G L DA KVFD
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 163 --------DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
+IP K+V SW A+I GY+E+G +EA++LF+ +++ +RPD + +V V+ AC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A+ G + GR + ++ + G N+ + L+++Y+KCG +E A +F+ + +DV+ W+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG--------NR 326
+I GY L +EAL LF EM + P+ M+ +L ACA LGA+ +G R
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
KG+ +A L T+LID+YAKCG +
Sbjct: 397 LKGVTNASS------LRTSLIDMYAKCGDI 420
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 159/293 (54%), Gaps = 2/293 (0%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H+D + +++ G + + LFD+ + WN MI G + + + ++L+
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M + P+ T V+ ACA+ LG +H + GF ++ + L+ YSKCG
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L A +F+ +P K+V SW LI GY+ L +EA+ LF+ +L G P+ ++ +L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 214 CARLGDLGSGRWIDRYMSE--SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
CA LG + GRWI Y+ + G+ + T+L++MYAKCG +E A +VF+ +L + +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
W+AMI G+A +G + LF M+K ++PD VG+LSAC+ G L LG
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 175/315 (55%), Gaps = 4/315 (1%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
LVSL R +G+ +F+ + L++TM++G +Q + M
Sbjct: 75 LVSLFCR----YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD 130
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P + FT++LK C +G +H L+VK+GF D+F TGL Y+KC + +AR
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
KVFD +PE+++ SW ++ GYS++G+ A+++ + + E L+P +V VL A + L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQ 278
+ G+ I Y SG V + T LV+MYAKCGS+E AR++FDGMLER+VV W++MI
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
Y N P+EA+ +F +M E ++P +++G L ACA LG L+ G L
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 339 NPVLGTALIDLYAKC 353
N + +LI +Y KC
Sbjct: 371 NVSVVNSLISMYCKC 385
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 169/305 (55%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
+ + +FD+ + WNT++ G N +++ SM ++ P T VL
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
A + L +G +H +++GF V + T L+ Y+KCG L AR++FD + E+NV S
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
W ++I Y ++ +EA+ +F+ +L+ G++P +++ L ACA LGDL GR+I +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQ 291
E GL RNV V +L++MY KC ++ A +F + R +V W+AMI G+A NG P +AL
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 292 LFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYA 351
F +M+ ++PD F V V++A A L G++ N + TAL+D+YA
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 352 KCGSM 356
KCG++
Sbjct: 485 KCGAI 489
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 146/274 (53%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + LFD N WN+MI V N+ + + ++ M +G P + L
Sbjct: 285 GSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
ACA L G +H L V+ G +V V L+ Y KC + A +F + + +
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW A+I G++++G +A++ F + ++PD+ V V+ A A L +WI +
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
S L +NVFV T LV+MYAKCG++ AR +FD M ER V W+AMI GY ++G + AL
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+LF EMQK ++P+ + V+SAC+ G ++ G
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 6/268 (2%)
Query: 92 HSMHQQGFFPESF---TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
H + ++ + P + +L+ C+ L + LV K G + F +T L+ +
Sbjct: 23 HFLSERNYIPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLF 79
Query: 149 SKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV 208
+ G + +A +VF+ I K + ++ G+++ ++A+ F + + P N
Sbjct: 80 CRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFT 139
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
++L C +L G+ I + +SG ++F T L NMYAKC + EAR+VFD M ER
Sbjct: 140 YLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
D+V W+ ++ GY+ NG+ R AL++ M +ENL+P +V VL A + L + +G
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 329 GLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G F S + TAL+D+YAKCGS+
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSL 287
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 161/268 (60%), Gaps = 1/268 (0%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
LLF P+ FL+N++I+ + Y M P ++TFT V+K+CA L
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
+G +H V +GF D +V+ L+ FYSKCG + AR+VFD +PEK++ +W +L+
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G+ ++GL +EA+ +F + E G PDSA V +L ACA+ G + G W+ +Y+ GL
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL 241
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
NV +GT L+N+Y++CG + +AR VFD M E +V W+AMI Y ++G ++A++LF +M+
Sbjct: 242 NVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKME 301
Query: 298 KE-NLRPDCFAMVGVLSACARLGALQLG 324
+ P+ V VLSACA G ++ G
Sbjct: 302 DDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 133/255 (52%), Gaps = 3/255 (1%)
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
S + +++A R+ +H+ ++ TG+ + T L+ + +F
Sbjct: 9 SAAYEAIVRAGPRVKQLQ---QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFL 65
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+P + + ++I S+ L V +R +L + P + V+ +CA L L
Sbjct: 66 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 125
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G+ + + SG + +V LV Y+KCG ME AR+VFD M E+ +V W++++ G+
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
NGL EA+Q+F++M++ PD V +LSACA+ GA+ LG+ + +E N L
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 343 GTALIDLYAKCGSMG 357
GTALI+LY++CG +G
Sbjct: 246 GTALINLYSRCGDVG 260
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ + ++ G+ + +FD+ + WN+++ G N + IQ+++ M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ GF P+S TF +L ACA+ LG +H ++ G +V + T L+ YS+CG +
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGAC 214
AR+VFD + E NVA+WTA+I Y G ++AV+LF + + G P++ V VL AC
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 215 ARLGDLGSGRWIDRYMSES-----GLHRNVFVGTTLVNMYAKCGSMEEARR 260
A G + GR + + M++S G+ +V +V+M + G ++EA +
Sbjct: 321 AHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYK 367
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 174/311 (55%), Gaps = 8/311 (2%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N + + +F+ P+ ++WN+MIRG ++ + Y M ++G+ P+ FTF +VLK
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
AC+ L G +H VVKTGF +++V T LL Y CG + +VF+DIP+ NV +
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
W +LI G+ + +A++ FR + G++ + +V +L AC R D+ +G+W ++
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 232 --------ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
+S + NV + T+L++MYAKCG + AR +FDGM ER +V W+++I GY+ N
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
G EAL +F +M + PD + V+ A G QLG + F+ + +
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 344 TALIDLYAKCG 354
AL+++YAK G
Sbjct: 356 CALVNMYAKTG 366
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 9/298 (3%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
Y+ + +L G ++ +F+ N W ++I G V+N+ F D I+ + M
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF-------VG-DVFVETGLLGFYS 149
G +L AC R G H + GF VG +V + T L+ Y+
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
KCG LR AR +FD +PE+ + SW ++I GYS++G EEA+ +F +L++G+ PD +
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLS 322
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
V+ A G G+ I Y+S++G ++ + LVNMYAK G E A++ F+ + ++D
Sbjct: 323 VIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKD 382
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQ-KENLRPDCFAMVGVLSACARLGALQLGNR 326
+ W+ +I G AS+G EAL +F MQ K N PD +GVL AC+ +G ++ G R
Sbjct: 383 TIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 11/245 (4%)
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCG---HLRDARKVFDDIPEKNVASWTALICGY 179
+ LH L++K+ + +V + L+ F + C +L AR VF+ I +V W ++I GY
Sbjct: 23 NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGY 82
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
S S ++A+ ++ +L G PD +VL AC+ L D+ G + ++ ++G N+
Sbjct: 83 SNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM 142
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
+V T L++MY CG + RVF+ + + +VV W ++I G+ +N +A++ F EMQ
Sbjct: 143 YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSN 202
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS--------NPVLGTALIDLYA 351
++ + MV +L AC R + G G + F N +L T+LID+YA
Sbjct: 203 GVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYA 262
Query: 352 KCGSM 356
KCG +
Sbjct: 263 KCGDL 267
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 186/324 (57%), Gaps = 11/324 (3%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNP-NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
YLVSL + + +F + P N F+WNT+IRG + LY M
Sbjct: 59 YLVSLPSPPPMSYAHK-----VFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRV 113
Query: 97 QGFF-PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P++ T+ F++KA + LG T+HS+V+++GF ++V+ LL Y+ CG +
Sbjct: 114 SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA 173
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A KVFD +PEK++ +W ++I G++E+G EEA+ L+ + G++PD +V +L ACA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
++G L G+ + YM + GL RN+ L+++YA+CG +EEA+ +FD M++++ V W++
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 293
Query: 276 MIQGYASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+I G A NG +EA++LF M+ E L P VG+L AC+ G ++ G M E
Sbjct: 294 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR-E 352
Query: 335 EFLSNPVLG--TALIDLYAKCGSM 356
E+ P + ++DL A+ G +
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQV 376
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 187/336 (55%), Gaps = 12/336 (3%)
Query: 8 LLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNT----HHPKLLFDQT 63
L Q + Q+K H H++ Y +S +L + H N H+ +FD
Sbjct: 16 LASQRCNTVKQIKSTHSLFIIHGL--HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI 73
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM---HQQGFFPESFTFTFVLKACARLCHFH 120
PN+F+++TMIR + H G++ + M ++ P TF F++ AC + C F
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFS 133
Query: 121 LGHTLHSLVVKTG-FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
+G +H VVK G F+ D V+TG+L Y + L DARKVFD+IP+ +V W L+ GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRN 238
GL E +++F+ +L G+ PD ++ L ACA++G L G+WI ++ + + +
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESD 253
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
VFVGT LV+MYAKCG +E A VF+ + R+V W+A+I GYA+ G ++A +++
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 299 EN-LRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
E+ ++PD ++GVL+ACA G L+ G M+A
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFY----SKCGHLRDARKVFDDIPEKNVASWTALICGY 179
+ HSL + G + + + LL + + H A +FD I N + +I
Sbjct: 29 STHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRIC 88
Query: 180 SESGLCEEAVDLFRGLL---EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
S S + F ++ E + P ++ AC + G+ I ++ ++G+
Sbjct: 89 SRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVF 148
Query: 237 -RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ V T ++ +Y + + +AR+VFD + + DVV W ++ GY GL E L++F E
Sbjct: 149 LSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKE 208
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV-LGTALIDLYAKCG 354
M + PD F++ L+ACA++GAL G + + ++ + V +GTAL+D+YAKCG
Sbjct: 209 MLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCG 268
Query: 355 SM 356
+
Sbjct: 269 CI 270
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 179/311 (57%), Gaps = 7/311 (2%)
Query: 45 RSSFHFGNTHHPKLLFDQTHNPNT-FLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPES 103
R S F K +F+ + + T F++N++IRG + ++ I L+ M G P+
Sbjct: 80 RESLSFA-----KEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 104 FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
+TF F L ACA+ G +H L+VK G+ D+FV+ L+ FY++CG L ARKVFD+
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ E+NV SWT++ICGY+ ++AVDLF R + + + P+S +V V+ ACA+L DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G + ++ SG+ N + + LV+MY KC +++ A+R+FD ++ +AM Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
GL REAL +F M +RPD +M+ +S+C++L + G G + F S +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 343 GTALIDLYAKC 353
ALID+Y KC
Sbjct: 375 CNALIDMYMKC 385
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 8/252 (3%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG---HLRDARKVFDDIPE 166
LK C + + H + K G DV T L+ + G L A++VF++
Sbjct: 39 LKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 167 KNVA-SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
+ +LI GY+ SGLC EA+ LF ++ G+ PD L ACA+ G+G
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
I + + G +++FV +LV+ YA+CG ++ AR+VFD M ER+VV W++MI GYA
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 286 PREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
++A+ LFF M + E + P+ MV V+SACA+L L+ G + + N ++ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 345 ALIDLYAKCGSM 356
AL+D+Y KC ++
Sbjct: 276 ALVDMYMKCNAI 287
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 37/350 (10%)
Query: 42 LVLRSSFHF----GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQ 96
V S HF G + +FD+ N W +MI G D D + L+ M
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+ P S T V+ ACA+L G +++ + +G + + + L+ Y KC +
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A+++FD+ N+ A+ Y GL EA+ +F +++ G+RPD +++ + +C++
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD------------- 263
L ++ G+ Y+ +G + L++MY KC + A R+FD
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 264 ------------------GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ-KENLRPD 304
M E+++V W+ +I G L EA+++F MQ +E + D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M+ + SAC LGAL L ++ + LGT L+D++++CG
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 32/300 (10%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K LFD+ N L N M V + + +++ M G P+ + + +C++L
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC------------------------- 151
+ G + H V++ GF + L+ Y KC
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 152 ------GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDS 204
G + A + F+ +PEKN+ SW +I G + L EEA+++F + + G+ D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ + AC LG L +WI Y+ ++G+ +V +GTTLV+M+++CG E A +F+
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ RDV W+A I A G A++LF +M ++ L+PD A VG L+AC+ G +Q G
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 9/224 (4%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFFPESFTFTFVLKACARLCH 118
F+ N WNT+I G+V F + I+++ SM Q+G + T + AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
L ++ + K G DV + T L+ +S+CG A +F+ + ++V++WTA I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH-- 236
+ +G E A++LF ++E GL+PD V L AC+ G + G+ I + S LH
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI--FYSMLKLHGV 603
Query: 237 --RNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
+V G +V++ + G +EEA ++ + M +E + V W++++
Sbjct: 604 SPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 179/311 (57%), Gaps = 7/311 (2%)
Query: 45 RSSFHFGNTHHPKLLFDQTHNPNT-FLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPES 103
R S F K +F+ + + T F++N++IRG + ++ I L+ M G P+
Sbjct: 80 RESLSFA-----KEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDK 134
Query: 104 FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
+TF F L ACA+ G +H L+VK G+ D+FV+ L+ FY++CG L ARKVFD+
Sbjct: 135 YTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDE 194
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ E+NV SWT++ICGY+ ++AVDLF R + + + P+S +V V+ ACA+L DL +
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G + ++ SG+ N + + LV+MY KC +++ A+R+FD ++ +AM Y
Sbjct: 255 GEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR 314
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
GL REAL +F M +RPD +M+ +S+C++L + G G + F S +
Sbjct: 315 QGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNI 374
Query: 343 GTALIDLYAKC 353
ALID+Y KC
Sbjct: 375 CNALIDMYMKC 385
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 136/252 (53%), Gaps = 8/252 (3%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG---HLRDARKVFDDIPE 166
LK C + + H + K G DV T L+ + G L A++VF++
Sbjct: 39 LKNCKTIDELKM---FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSES 95
Query: 167 KNVA-SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
+ +LI GY+ SGLC EA+ LF ++ G+ PD L ACA+ G+G
Sbjct: 96 YGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQ 155
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
I + + G +++FV +LV+ YA+CG ++ AR+VFD M ER+VV W++MI GYA
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 286 PREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
++A+ LFF M + E + P+ MV V+SACA+L L+ G + + N ++ +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 345 ALIDLYAKCGSM 356
AL+D+Y KC ++
Sbjct: 276 ALVDMYMKCNAI 287
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 37/350 (10%)
Query: 42 LVLRSSFHF----GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQ 96
V S HF G + +FD+ N W +MI G D D + L+ M
Sbjct: 170 FVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 229
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+ P S T V+ ACA+L G +++ + +G + + + L+ Y KC +
Sbjct: 230 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 289
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A+++FD+ N+ A+ Y GL EA+ +F +++ G+RPD +++ + +C++
Sbjct: 290 AKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD------------- 263
L ++ G+ Y+ +G + L++MY KC + A R+FD
Sbjct: 350 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSI 409
Query: 264 ------------------GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ-KENLRPD 304
M E+++V W+ +I G L EA+++F MQ +E + D
Sbjct: 410 VAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNAD 469
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M+ + SAC LGAL L ++ + LGT L+D++++CG
Sbjct: 470 GVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 32/300 (10%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K LFD+ N L N M V + + +++ M G P+ + + +C++L
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC------------------------- 151
+ G + H V++ GF + L+ Y KC
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 152 ------GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDS 204
G + A + F+ +PEKN+ SW +I G + L EEA+++F + + G+ D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ + AC LG L +WI Y+ ++G+ +V +GTTLV+M+++CG E A +F+
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNS 530
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ RDV W+A I A G A++LF +M ++ L+PD A VG L+AC+ G +Q G
Sbjct: 531 LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQG 590
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 9/224 (4%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFFPESFTFTFVLKACARLCH 118
F+ N WNT+I G+V F + I+++ SM Q+G + T + AC L
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
L ++ + K G DV + T L+ +S+CG A +F+ + ++V++WTA I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH-- 236
+ +G E A++LF ++E GL+PD V L AC+ G + G+ I + S LH
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI--FYSMLKLHGV 603
Query: 237 --RNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
+V G +V++ + G +EEA ++ + M +E + V W++++
Sbjct: 604 SPEDVHYG-CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLL 646
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 181/340 (53%), Gaps = 33/340 (9%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTF 108
F + + + +FD+ PN+F WNT+IR I + M + +P +TF F
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
++KA A + LG +LH + VK+ DVFV L+ Y CG L A KVF I EK+
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V SW ++I G+ + G ++A++LF+ + ++ +V VL ACA++ +L GR +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA------- 281
Y+ E+ ++ N+ + +++MY KCGS+E+A+R+FD M E+D V W+ M+ GYA
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 282 ------------------------SNGLPREALQLFFEMQ-KENLRPDCFAMVGVLSACA 316
NG P EAL +F E+Q ++N++ + +V LSACA
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++GAL+LG + N + +ALI +Y+KCG +
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 32/316 (10%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D ++ + ++ F G+ +F + WN+MI G V ++L+ M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ T VL ACA++ + G + S + + ++ + +L Y+KCG +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 156 DARKVFD-------------------------------DIPEKNVASWTALICGYSESGL 184
DA+++FD +P+K++ +W ALI Y ++G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 185 CEEAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
EA+ +F L L+ ++ + LV L ACA++G L GRWI Y+ + G+ N V +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
L++MY+KCG +E++R VF+ + +RDV WSAMI G A +G EA+ +F++MQ+ N++P
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 304 DCFAMVGVLSACARLG 319
+ V AC+ G
Sbjct: 465 NGVTFTNVFCACSHTG 480
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 3/234 (1%)
Query: 126 HSLVVKTGFVGDVFVETGLLGF--YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
H +++TG D + + L S L ARKVFD+IP+ N +W LI Y+
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 184 LCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
++ F ++ E P+ ++ A A + L G+ + +S + +VFV
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+L++ Y CG ++ A +VF + E+DVV W++MI G+ G P +AL+LF +M+ E+++
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
MVGVLSACA++ L+ G + ++ N L A++D+Y KCGS+
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 177/347 (51%), Gaps = 39/347 (11%)
Query: 15 SFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTM 74
+F+Q+K H D LV ++ S FG T + L+F+Q +P+TF WN M
Sbjct: 32 NFSQLKQIHTKIIKHNLT--NDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLM 89
Query: 75 IRGMVDNDCFHDGIQLYHSM---HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
IR + N + + L+ M HQ F + FTF FV+KAC LG +H L +K
Sbjct: 90 IRSLSVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLASSSIRLGTQVHGLAIK 147
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFD----------------------------- 162
GF DVF + L+ Y KCG RKVFD
Sbjct: 148 AGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIV 207
Query: 163 --DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
+P +NV SWTA+I Y ++ +EA LFR + ++P+ +V++L A +LG L
Sbjct: 208 FNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSL 267
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
GRW+ Y ++G + F+GT L++MY+KCGS+++AR+VFD M + + W++MI
Sbjct: 268 SMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSL 327
Query: 281 ASNGLPREALQLF-FEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+G EAL LF ++ ++ PD VGVLSACA G ++ G R
Sbjct: 328 GVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 374
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 38/288 (13%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
PE+ ++ L+ C+ +F +H+ ++K D + L+ S G + A V
Sbjct: 21 PEA---SYFLRTCS---NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLV 74
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGD 219
F+ + + +W +I S + EA+ LF ++ + D V+ AC
Sbjct: 75 FNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSS 134
Query: 220 LGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML------------- 266
+ G + ++G +VF TL+++Y KCG + R+VFD M
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 267 ------------------ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
R+VV W+AMI Y N P EA QLF MQ ++++P+ F +
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
V +L A +LG+L +G F+ + LGTALID+Y+KCGS+
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSL 302
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 2/211 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+++F+Q N W MI V N + QL+ M P FT +L+A +L
Sbjct: 205 EIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQL 264
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+G +H K GFV D F+ T L+ YSKCG L+DARKVFD + K++A+W ++I
Sbjct: 265 GSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMI 324
Query: 177 CGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESG 234
G EEA+ LF + E + PD+ V VL ACA G++ G R+ R + G
Sbjct: 325 TSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYG 384
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ ++ + + +E+A + + M
Sbjct: 385 ISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 170/295 (57%), Gaps = 5/295 (1%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P FLWN ++R + ++ D IQ+Y M + P+ ++ V+KA ++ F LG L
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
HS+ V+ GFVGD F E+G + Y K G +ARKVFD+ PE+ + SW A+I G + +G
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR--YMSESGLHRNVFVGT 243
EAV++F + GL PD +V V +C LGDL + + +++ ++ +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+L++MY KCG M+ A +F+ M +R+VV WS+MI GYA+NG EAL+ F +M++ +RP
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
+ VGVLSAC G ++ G +M + EF P L ++DL ++ G +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKS-EFELEPGLSHYGCIVDLLSRDGQL 373
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 4/233 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + + +FD+ WN +I G+ ++ ++++ M + G P+ FT V
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 111 KACARLCHFHLGHTLHSLVV--KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+C L L LH V+ KT D+ + L+ Y KCG + A +F+++ ++N
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WID 227
V SW+++I GY+ +G EA++ FR + E G+RP+ V VL AC G + G+ +
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA 345
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
SE L + +V++ ++ G ++EA++V + M ++ +V+ W ++ G
Sbjct: 346 MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 180/331 (54%), Gaps = 21/331 (6%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHD------GIQLY 91
+L +L+ S F + ++ +FD N ++F+WNT+IR C HD LY
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRA-----CAHDVSRKEEAFMLY 138
Query: 92 HSMHQQG-FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
M ++G P+ TF FVLKACA + F G +H +VK GF GDV+V GL+ Y
Sbjct: 139 RKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGS 198
Query: 151 CGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
CG L ARKVFD++PE+++ SW ++I G + A+ LFR ++ PD + V
Sbjct: 199 CGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFRE-MQRSFEPDGYTMQSV 257
Query: 211 LGACARLGDLGSGRWIDRYM---SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
L ACA LG L G W ++ + + +V V +L+ MY KCGS+ A +VF GM +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQK 317
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEM--QKENLRPDCFAMVGVLSACARLGALQLGN 325
RD+ W+AMI G+A++G EA+ F M ++EN+RP+ VG+L AC G + G
Sbjct: 318 RDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGR 377
Query: 326 RAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+ +M ++ P L ++DL A+ G
Sbjct: 378 QYFDMM-VRDYCIEPALEHYGCIVDLIARAG 407
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 11/241 (4%)
Query: 125 LHSLVVKTGFVGD---VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI--CGY 179
LH+ ++T + + +F+ +L S + A +VFD I + W LI C +
Sbjct: 67 LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH 126
Query: 180 SESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
S EEA L+R +LE G PD VL ACA + G+ + + + G +
Sbjct: 127 DVSRK-EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGD 185
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V+V L+++Y CG ++ AR+VFD M ER +V W++MI G ALQLF EMQ+
Sbjct: 186 VYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR 245
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE---EFLSNPVLGTALIDLYAKCGS 355
+ PD + M VLSACA LG+L LG A + + + + ++ +LI++Y KCGS
Sbjct: 246 -SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGS 304
Query: 356 M 356
+
Sbjct: 305 L 305
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 172/328 (52%), Gaps = 34/328 (10%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG---FFPESFTFTFVLKACARLCHFH 120
NPN F WN IRG +++ + LY M + G P+ FT+ + K CA L
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 121 LGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYS 180
LGH + V+K V + ++ CG + +ARKVFD+ P +++ SW LI GY
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+ G E+A+ +++ + G++PD ++ ++ +C+ LGDL G+ Y+ E+GL +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL--------------- 285
+ L++M++KCG + EARR+FD + +R +V W+ MI GYA GL
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 286 ----------------PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
++AL LF EMQ N +PD M+ LSAC++LGAL +G
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSMG 357
++ N LGT+L+D+YAKCG++
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNIS 441
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 38/353 (10%)
Query: 39 LVSLVLRSSFHF----GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
LVS V +S H G+ + + +FD++ + WN +I G I +Y M
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLM 248
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+G P+ T ++ +C+ L + G + V + G + + L+ +SKCG +
Sbjct: 249 ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDI 308
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLC----------------------------- 185
+AR++FD++ ++ + SWT +I GY+ GL
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAK 368
Query: 186 --EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
++A+ LF+ + +PD ++H L AC++LG L G WI RY+ + L NV +GT
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+LV+MYAKCG++ EA VF G+ R+ + ++A+I G A +G A+ F EM + P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
D +G+LSAC G +Q G M + F NP L + ++DL + G
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKS-RFNLNPQLKHYSIMVDLLGRAG 540
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF--YSKCGHLRDARKVFDDIPE 166
+L+ C L H + + ++ G + D F + L+ F S+ +L + K+ I
Sbjct: 59 LLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGL---RPDSANLVHVLGACARLGDLGSG 223
N+ SW I G+SES +E+ L++ +L G RPD + CA L G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
I ++ + L V ++M+A CG ME AR+VFD RD+V W+ +I GY
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
G +A+ ++ M+ E ++PD M+G++S+C+ LG L G + L
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV 295
Query: 344 TALIDLYAKCGSM 356
AL+D+++KCG +
Sbjct: 296 NALMDMFSKCGDI 308
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD + LWN MI G V D + L+ M P+ T L AC++L
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+G +H + K +V + T L+ Y+KCG++ +A VF I +N ++TA+I G
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 464
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSESGLHR 237
+ G A+ F +++ G+ PD + +L AC G + +GR + + S L+
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 524
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ + +V++ + G +EEA R+ + M +E D W A++ G
Sbjct: 525 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFG 567
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 1/306 (0%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFT 107
FGN +F + N F WN ++ G F + + LYH M G P+ +TF
Sbjct: 141 RFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFP 200
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
VL+ C + G +H VV+ G+ D+ V L+ Y KCG ++ AR +FD +P +
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
++ SW A+I GY E+G+C E ++LF + + + PD L V+ AC LGD GR I
Sbjct: 261 DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIH 320
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
Y+ +G ++ V +L MY GS EA ++F M +D+V W+ MI GY N LP
Sbjct: 321 AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPD 380
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
+A+ + M +++++PD + VLSACA LG L G L +S ++ LI
Sbjct: 381 KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLI 440
Query: 348 DLYAKC 353
++Y+KC
Sbjct: 441 NMYSKC 446
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 5/320 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+++ ++ G+ +LLFD+ + WN MI G +N H+G++L+ +M
Sbjct: 235 NALITMYVKC----GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRG 290
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
P+ T T V+ AC L LG +H+ V+ TGF D+ V L Y G R+
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A K+F + K++ SWT +I GY + L ++A+D +R + + ++PD + VL ACA
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
LGDL +G + + ++ L V V L+NMY+KC +++A +F + ++V+ W+++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
I G N EAL +F K L+P+ + L+ACAR+GAL G +
Sbjct: 471 IAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGV 529
Query: 337 LSNPVLGTALIDLYAKCGSM 356
+ L AL+D+Y +CG M
Sbjct: 530 GLDDFLPNALLDMYVRCGRM 549
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 150/311 (48%), Gaps = 12/311 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + LF + + W TMI G N I Y M Q P+ T VL
Sbjct: 346 GSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVL 405
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
ACA L G LH L +K + V V L+ YSKC + A +F +IP KNV
Sbjct: 406 SACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVI 465
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SWT++I G + C EA+ R + +M L+P++ L L ACAR+G L G+ I ++
Sbjct: 466 SWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+G+ + F+ L++MY +CG M A F+ ++DV W+ ++ GY+ G +
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVV 583
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM---DAEEFLSNPVLG--TA 345
+LF M K +RPD + +L C++ ++ +GLM E++ P L
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVR-----QGLMYFSKMEDYGVTPNLKHYAC 638
Query: 346 LIDLYAKCGSM 356
++DL + G +
Sbjct: 639 VVDLLGRAGEL 649
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 1/282 (0%)
Query: 75 IRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF 134
+ G+ N + ++L +SM + + F +++ C G ++S+ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 135 VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRG 194
V + L + + G+L DA VF + E+N+ SW L+ GY++ G +EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 195 LLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCG 253
+L +G ++PD VL C + DL G+ + ++ G ++ V L+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 254 SMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
++ AR +FD M RD++ W+AMI GY NG+ E L+LFF M+ ++ PD + V+S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
AC LG +LG + F + + +L +Y GS
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGS 347
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 59 LFDQTHNPNTFLWNTMIRGM-VDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
+F N W ++I G+ ++N CF I L + P + T T L ACAR+
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ--MKMTLQPNAITLTAALAACARIG 512
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
G +H+ V++TG D F+ LL Y +CG + A F+ +K+V SW L+
Sbjct: 513 ALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLT 571
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
GYSE G V+LF +++ +RPD + +L C++ + G M + G+
Sbjct: 572 GYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP 631
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASNGLPREALQLF 293
N+ +V++ + G ++EA + M + D W A++ + L + Q
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHI 691
Query: 294 FEMQKE---------NLRPDC 305
FE+ K+ NL DC
Sbjct: 692 FELDKKSVGYYILLCNLYADC 712
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC--ARLGDLGSGRWIDRYMSESGL 235
G +G EEA+ L + E+ + D V ++ C R + GS + S S L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
V +G + M+ + G++ +A VF M ER++ W+ ++ GYA G EA+ L+
Sbjct: 128 --GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 296 M-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M ++PD + VL C + L G + + + + ALI +Y KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 355 SM 356
+
Sbjct: 246 DV 247
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 168/304 (55%), Gaps = 2/304 (0%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
FG T +L+FDQ P+ +LW M+R N + ++LY + + GF + F+
Sbjct: 89 FGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKA 148
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
LKAC L G +H +VK +V V TGLL Y+KCG ++ A KVF+DI +NV
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNV 207
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
WT++I GY ++ LCEE + LF + E + + ++ AC +L L G+W
Sbjct: 208 VCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGC 267
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ +SG+ + + T+L++MY KCG + ARRVF+ D+V W+AMI GY NG EA
Sbjct: 268 LVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA 327
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L LF +M+ ++P+C + VLS C + L+LG GL + + + + AL+ +
Sbjct: 328 LSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL-SIKVGIWDTNVANALVHM 386
Query: 350 YAKC 353
YAKC
Sbjct: 387 YAKC 390
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 170/321 (52%), Gaps = 3/321 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
DN +++ +L G +F+ N W +MI G V ND +G+ L++ M
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ +T+ ++ AC +L H G H +VK+G + T LL Y KCG +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+AR+VF++ ++ WTA+I GY+ +G EA+ LF+ + + ++P+ + VL C
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+ +L GR + + G+ + V LV+MYAKC +A+ VF+ E+D+V W++
Sbjct: 355 LIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
+I G++ NG EAL LF M E++ P+ + + SACA LG+L +G+
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 336 FLSNPV--LGTALIDLYAKCG 354
FL++ +GTAL+D YAKCG
Sbjct: 474 FLASSSVHVGTALLDFYAKCG 494
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 4/321 (1%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
LV+ +L G+ + + +F++ + + +W MI G N ++ + L+ M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P T VL C + + LG ++H L +K G + D V L+ Y+KC RDA+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAK 397
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
VF+ EK++ +W ++I G+S++G EA+ LF + + P+ + + ACA LG
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 219 DLGSGRWIDRYMSESGL--HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L G + Y + G +V VGT L++ YAKCG + AR +FD + E++ + WSAM
Sbjct: 458 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE-E 335
I GY G +L+LF EM K+ +P+ +LSAC G + G + M +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F + T ++D+ A+ G +
Sbjct: 578 FTPSTKHYTCMVDMLARAGEL 598
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 123/231 (53%), Gaps = 1/231 (0%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H ++ G +GD+ + T L+ Y G+ +DAR VFD IPE + W ++ Y +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
E V L+ L++ G R D L AC L DL +G+ I + + NV V T L
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGL 182
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
++MYAKCG ++ A +VF+ + R+VVCW++MI GY N L E L LF M++ N+ +
Sbjct: 183 LDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNE 242
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ ++ AC +L AL G G + + L T+L+D+Y KCG +
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 201 bits (511), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 183/356 (51%), Gaps = 35/356 (9%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
Q +++V+ ++ + + LF+Q NPN FL+N++IR N + D I++Y +
Sbjct: 40 QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQL 99
Query: 95 HQQGF-FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
++ F P+ FTF F+ K+CA L +LG +H + K G V E L+ Y K
Sbjct: 100 LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDD 159
Query: 154 LRDARKVFDDIPE-------------------------------KNVASWTALICGYSES 182
L DA KVFD++ E K + SWTA+I GY+
Sbjct: 160 LVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGI 219
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
G EA+D FR + G+ PD +L+ VL +CA+LG L G+WI Y G + V
Sbjct: 220 GCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
L+ MY+KCG + +A ++F M +DV+ WS MI GYA +G A++ F EMQ+ ++
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
P+ +G+LSAC+ +G Q G R +M +++ P + LID+ A+ G +
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMM-RQDYQIEPKIEHYGCLIDVLARAGKL 394
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 192/361 (53%), Gaps = 13/361 (3%)
Query: 2 ALELKNLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFD 61
A E+ + K+ +QVK+ H L S ++ + G H L
Sbjct: 27 APEITPPFIHKCKTISQVKLIHQKLLSFGILTLN---LTSHLISTYISVGCLSHAVSLLR 83
Query: 62 Q--THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
+ + + WN++IR DN C + + L+ MH + P+++TF FV KAC +
Sbjct: 84 RFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSV 143
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G + H+L + TGF+ +VFV L+ YS+C L DARKVFD++ +V SW ++I Y
Sbjct: 144 RCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 180 SESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
++ G + A+++F R E G RPD+ LV+VL CA LG G+ + + S + +N
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+FVG LV+MYAKCG M+EA VF M +DVV W+AM+ GY+ G +A++LF +MQ+
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
E ++ D +S A+ G LG A G+ + LS+ + LI + + C S+
Sbjct: 324 EKIKMDVVTWSAAISGYAQRG---LGYEALGV--CRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 357 G 357
G
Sbjct: 379 G 379
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 168/348 (48%), Gaps = 48/348 (13%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ-GFFPESFTFTFVLKACAR 115
+ +FD+ + WN++I ++++ M + G P++ T VL CA
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASW--- 172
L LG LH V + + ++FV L+ Y+KCG + +A VF ++ K+V SW
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 173 --------------------------------TALICGYSESGLCEEAVDLFRGLLEMGL 200
+A I GY++ GL EA+ + R +L G+
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRY-------MSESGLHRNVFVGTTLVNMYAKCG 253
+P+ L+ VL CA +G L G+ I Y + ++G V L++MYAKC
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 254 SMEEARRVFDGM--LERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN--LRPDCFAMV 309
++ AR +FD + ERDVV W+ MI GY+ +G +AL+L EM +E+ RP+ F +
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPV-LGTALIDLYAKCGSM 356
L ACA L AL++G + + + P+ + LID+YAKCGS+
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 144/306 (47%), Gaps = 19/306 (6%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ W+ I G ++ + + M G P T VL CA + G +H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 127 SLVVK-------TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP--EKNVASWTALIC 177
+K G + V L+ Y+KC + AR +FD + E++V +WT +I
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 178 GYSESGLCEEAVDLFRGLLEMG--LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
GYS+ G +A++L + E RP++ + L ACA L L G+ I Y +
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 236 HR-NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
+ +FV L++MYAKCGS+ +AR VFD M+ ++ V W++++ GY +G EAL +F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLG----NRAKGLMDAEEFLSNPVLGTALIDLY 350
EM++ + D ++ VL AC+ G + G NR K + P L+DL
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS---PGPEHYACLVDLL 625
Query: 351 AKCGSM 356
+ G +
Sbjct: 626 GRAGRL 631
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 170/323 (52%), Gaps = 33/323 (10%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
P+ ++N M++ + D F + L+ + QG +P++FT VLK+ RL G
Sbjct: 7 QTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
+H VK G D +V L+G Y+ G + KVFD++P+++V SW LI Y +G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 184 LCEEAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
E+A+ +F+ + E L+ D +V L AC+ L +L G I R++ + +V +G
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIG 185
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG--------LPR------- 287
LV+M+ KCG +++AR VFD M +++V CW++M+ GY S G R
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 288 ----------------EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
EAL+LF MQ +RPD F +V +L+ CA+ GAL+ G G +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 332 DAEEFLSNPVLGTALIDLYAKCG 354
+ + V+GTAL+D+YAKCG
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCG 328
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 158/323 (48%), Gaps = 33/323 (10%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D+Y+ + ++ G +FD+ + WN +I V N F D I ++ M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 96 QQGFFP-ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
Q+ + T L AC+ L + +G ++ VV T F V + L+ + KCG L
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCL 198
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEA-------------------------- 188
AR VFD + +KNV WT+++ GY +G +EA
Sbjct: 199 DKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFN 258
Query: 189 -----VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
++LFR + G+RPD+ LV +L CA+ G L G+WI Y++E+ + + VGT
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGT 318
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
LV+MYAKCG +E A VF + ERD W+++I G A NG+ AL L++EM+ +R
Sbjct: 319 ALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL 378
Query: 304 DCFAMVGVLSACARLGALQLGNR 326
D V VL+AC G + G +
Sbjct: 379 DAITFVAVLTACNHGGFVAEGRK 401
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
LF L GL PD+ L VL + RL + G + Y ++GL + +V +L+ MYA
Sbjct: 33 LFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA 92
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMV 309
G +E +VFD M +RDVV W+ +I Y NG +A+ +F M +E NL+ D +V
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
LSAC+ L L++G R + EF + +G AL+D++ KCG +
Sbjct: 153 STLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCL 198
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 165/289 (57%), Gaps = 2/289 (0%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN +R + F + I LY SM + G P++F+F F+LK+CA L G LH V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS--WTALICGYSESGLCEEA 188
K G + FV T L+ Y KCG + DARKVF++ P+ + S + ALI GY+ + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 189 VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNM 248
+FR + E G+ DS ++ ++ C L GR + + GL V V + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 249 YAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
Y KCGS+E RR+FD M + ++ W+A+I GY+ NGL + L+L+ +M+ + PD F +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
V VLS+CA LGA ++G+ L+++ F+ N + A I +YA+CG++
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 147/287 (51%), Gaps = 1/287 (0%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+N +I G N D ++ M + G +S T ++ C + LG +LH V
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
K G +V V + Y KCG + R++FD++P K + +W A+I GYS++GL + ++
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
L+ + G+ PD LV VL +CA LG G + + + +G NVFV ++MYA
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
+CG++ +AR VFD M + +V W+AMI Y +G+ L LF +M K +RPD V
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVM 363
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLS-NPVLGTALIDLYAKCGSM 356
VLSAC+ G G M E L P + L+DL + G +
Sbjct: 364 VLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 117/229 (51%), Gaps = 2/229 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + LFD+ WN +I G N +D ++LY M G P+ FT VL
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+CA L +GH + LV GFV +VFV + Y++CG+L AR VFD +P K++
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SWTA+I Y G+ E + LF +++ G+RPD A V VL AC+ G G + R M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 231 S-ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
E L + LV++ + G ++EA + M +E D W A++
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALL 433
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 175/336 (52%), Gaps = 42/336 (12%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + WN+M+ G +D + + + MH++GF ++F VL AC+ L
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+ G +HSL+ K+ F+ DV++ + L+ YSKCG++ DA++VFD++ ++NV SW +LI
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID-RYMSESGLHR 237
+ ++G EA+D+F+ +LE + PD L V+ ACA L + G+ + R + L
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDG-------------------------------ML 266
++ + V+MYAKC ++EAR +FD M
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMA 347
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
ER+VV W+A+I GY NG EAL LF +++E++ P ++ +L ACA L L LG +
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Query: 327 AK--------GLMDAEEFLSNPVLGTALIDLYAKCG 354
A EE + +G +LID+Y KCG
Sbjct: 408 AHVHVLKHGFKFQSGEE--DDIFVGNSLIDMYVKCG 441
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 174/359 (48%), Gaps = 41/359 (11%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ S ++ GN + + +FD+ + N WN++I N + + ++ M
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV-GDVFVETGLLGFYSKCGHL 154
+ P+ T V+ ACA L +G +H VVK + D+ + + Y+KC +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 155 RDARKVFDDIP-------------------------------EKNVASWTALICGYSESG 183
++AR +FD +P E+NV SW ALI GY+++G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS------ESGLHR 237
EEA+ LF L + P + ++L ACA L +L G ++ +SG
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
++FVG +L++MY KCG +EE VF M+ERD V W+AMI G+A NG EAL+LF EM
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREML 485
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+ +PD M+GVLSAC G ++ G M +F P+ T ++DL + G
Sbjct: 486 ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM-TRDFGVAPLRDHYTCMVDLLGRAG 543
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 159/291 (54%), Gaps = 35/291 (12%)
Query: 100 FPESFTFTFVLKAC--ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
F +S F +L +C ++L ++ + +H+ V+K+GF ++F++ L+ YSKCG L D
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRY-VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM------------------- 198
R+VFD +P++N+ +W +++ G ++ G +EA LFR + E
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 199 ------------GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
G + + VL AC+ L D+ G + +++S +V++G+ LV
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
+MY+KCG++ +A+RVFD M +R+VV W+++I + NG EAL +F M + + PD
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 307 AMVGVLSACARLGALQLGNRAKGLMDAEEFLSNP-VLGTALIDLYAKCGSM 356
+ V+SACA L A+++G G + + L N +L A +D+YAKC +
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 18/240 (7%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
+T +L+F + N WN +I G N + + L+ + ++ P ++F +L
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 111 KACARLCHFHLGHTLHSLVVKTGFV------GDVFVETGLLGFYSKCGHLRDARKVFDDI 164
KACA L HLG H V+K GF D+FV L+ Y KCG + + VF +
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
E++ SW A+I G++++G EA++LFR +LE G +PD ++ VL AC G + GR
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 225 WIDRYMSESGLHRNVFVG------TTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
Y S + R+ V T +V++ + G +EEA+ + + M ++ D V W +++
Sbjct: 514 ---HYF--SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 169/306 (55%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +F++ + W T+I G +D D + ++ M + G+ P FT + V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KA A GH LH VK GF +V V + LL Y++ G + DA+ VFD + +N
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW ALI G++ E+A++LF+G+L G RP + + GAC+ G L G+W+ YM
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+SG F G TL++MYAK GS+ +AR++FD + +RDVV W++++ YA +G +EA+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLY 350
F EM++ +RP+ + + VL+AC+ G L G LM + + ++DL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Query: 351 AKCGSM 356
+ G +
Sbjct: 409 GRAGDL 414
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 134/253 (52%), Gaps = 4/253 (1%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
+ +LK C G +H+ ++++ F D+ + LL Y+KCG L +ARKVF+ +P
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
+++ +WT LI GYS+ +A+ F +L G P+ L V+ A A G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
+ + + G NV VG+ L+++Y + G M++A+ VFD + R+ V W+A+I G+A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM--DAEEFLSNPVLG 343
+AL+LF M ++ RP F+ + AC+ G L+ G M E+ ++ G
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA--FAG 300
Query: 344 TALIDLYAKCGSM 356
L+D+YAK GS+
Sbjct: 301 NTLLDMYAKSGSI 313
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 124/258 (48%), Gaps = 4/258 (1%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
+G +L+FD + N WN +I G ++L+ M + GF P F++ +
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
AC+ G +H+ ++K+G F LL Y+K G + DARK+FD + +++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW +L+ Y++ G +EAV F + +G+RP+ + + VL AC+ G L G
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYEL 388
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASNGL 285
M + G+ + T+V++ + G + A R + M +E W A++ + + L
Sbjct: 389 MKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 286 PREALQLFFEMQKENLRP 303
A + FE+ ++ P
Sbjct: 449 GAYAAEHVFELDPDDPGP 466
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 176/336 (52%), Gaps = 32/336 (9%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + LF + P+ +WN MI+G DC +G++LY +M ++G P+S TF F+L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 111 KACARLC-HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
R G LH VVK G +++V+ L+ YS CG + AR VFD +++V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW +I GY+ EE+++L + + P S L+ VL AC+++ D + + Y
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG----- 284
+SE ++ + LVN YA CG M+ A R+F M RDV+ W+++++GY G
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 285 ------LP--------------------REALQLFFEMQKENLRPDCFAMVGVLSACARL 318
+P E+L++F EMQ + PD F MV VL+ACA L
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
G+L++G K +D + ++ V+G ALID+Y KCG
Sbjct: 382 GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCG 417
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 151/299 (50%), Gaps = 31/299 (10%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + F WN MI G + + I+L M + P S T VL AC+++
Sbjct: 192 VFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKD 251
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL------------RD---------- 156
L +H V + + +E L+ Y+ CG + RD
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKG 311
Query: 157 ---------ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
AR FD +P ++ SWT +I GY +G E++++FR + G+ PD +
Sbjct: 312 YVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTM 371
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
V VL ACA LG L G WI Y+ ++ + +V VG L++MY KCG E+A++VF M +
Sbjct: 372 VSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQ 431
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
RD W+AM+ G A+NG +EA+++FF+MQ +++PD +GVLSAC G + +
Sbjct: 432 RDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK 490
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 117/237 (49%), Gaps = 2/237 (0%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
+++ GN + FDQ + W MI G + CF++ ++++ M G P+
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
FT VL ACA L +G + + + K DV V L+ Y KCG A+KVF
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
D+ +++ +WTA++ G + +G +EA+ +F + +M ++PD + VL AC G +
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 223 GR-WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
R + + S+ + ++ +V+M + G ++EA + M + + + W A++
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 6/254 (2%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK--CGHLRDARKVFDD 163
F +L C F LHS + G + + L F+ GH+ A K+F
Sbjct: 37 FISILGVCKTTDQFK---QLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD-LGS 222
IPE +V W +I G+S+ E V L+ +L+ G+ PDS +L R G L
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G+ + ++ + GL N++V LV MY+ CG M+ AR VFD + DV W+ MI GY
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
E+++L EM++ + P ++ VLSAC+++ L R + + + L
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 343 GTALIDLYAKCGSM 356
AL++ YA CG M
Sbjct: 274 ENALVNAYAACGEM 287
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 171/300 (57%), Gaps = 6/300 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + + FLWN MI+G + + +Q Y M G ++FT+ FV+K+ A +
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H++V+K GFV DV+V L+ Y K G DA KVF+++PE+++ SW ++I G
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR- 237
Y G ++ LF+ +L+ G +PD + + LGAC+ + G+ I + S +
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+V V T++++MY+K G + A R+F+GM++R++V W+ MI YA NG +A F +M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 298 KEN-LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++N L+PD + +L A A L G G FL + VL TALID+Y +CG +
Sbjct: 326 EQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 150/290 (51%), Gaps = 5/290 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D +++ +L +G + + +F+ N WN MI N D + M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 96 QQ-GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+Q G P+ T +L A A L G T+H ++ GF+ + +ET L+ Y +CG L
Sbjct: 326 EQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
+ A +FD + EKNV SW ++I Y ++G A++LF+ L + L PDS + +L A
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A L GR I Y+ +S N + +LV+MYA CG +E+AR+ F+ +L +DVV W+
Sbjct: 442 AESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWN 501
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
++I YA +G R ++ LF EM + P+ +L+AC+ G + G
Sbjct: 502 SIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 10/322 (3%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+SL ++ G + +F++ + WN+MI G + + L+ M +
Sbjct: 169 NSLISLYMK----LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK 224
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLR 155
GF P+ F+ L AC+ + +G +H V++ GDV V T +L YSK G +
Sbjct: 225 CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGAC 214
A ++F+ + ++N+ +W +I Y+ +G +A F+ + E GL+PD +++L A
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS 344
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A L GR I Y G ++ + T L++MY +CG ++ A +FD M E++V+ W+
Sbjct: 345 AIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
++I Y NG AL+LF E+ +L PD + +L A A +L G +
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
+ SN ++ +L+ +YA CG +
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDL 482
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 2/227 (0%)
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
T V D + L GF + + DA ++FD++ + + W +I G++ GL EAV
Sbjct: 59 TKQVNDPALTRALRGF-ADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF 117
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
+ ++ G++ D+ V+ + A + L G+ I + + G +V+V +L+++Y K
Sbjct: 118 YSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMK 177
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
G +A +VF+ M ERD+V W++MI GY + G +L LF EM K +PD F+ +
Sbjct: 178 LGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSA 237
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVL-GTALIDLYAKCGSMG 357
L AC+ + + ++G + V+ T+++D+Y+K G +
Sbjct: 238 LGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 161/292 (55%), Gaps = 3/292 (1%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
++ W MI+G+ N + I+ + M QG + + F VL AC L + G +H
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
+ +++T F ++V + L+ Y KC L A+ VFD + +KNV SWTA++ GY ++G E
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EAV +F + G+ PD L + ACA + L G SGL V V +LV
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
+Y KCG ++++ R+F+ M RD V W+AM+ YA G E +QLF +M + L+PD
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 307 AMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
+ GV+SAC+R G ++ G R LM +E + P +G + +IDL+++ G +
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIV-PSIGHYSCMIDLFSRSGRL 524
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 35/330 (10%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFT---FTFVLKACARL 116
F++ + + WN +I G + ++ Y++M + F + T +LK +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLMTMLKLSSSN 152
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF---DDIP-------- 165
H LG +H V+K GF + V + LL Y+ G + DA+KVF DD
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLM 212
Query: 166 -------------------EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
EK+ SW A+I G +++GL +EA++ FR + GL+ D
Sbjct: 213 GGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
VL AC LG + G+ I + + +++VG+ L++MY KC + A+ VFD M
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+++VV W+AM+ GY G EA+++F +MQ+ + PD + + +SACA + +L+ G++
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G + + +L+ LY KCG +
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 119/233 (51%), Gaps = 2/233 (0%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H+ K +FD+ N W M+ G + ++++ M + G P+ +T + AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
A + G H + +G + V V L+ Y KCG + D+ ++F+++ ++ SWT
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSE 232
A++ Y++ G E + LF +++ GL+PD L V+ AC+R G + G R+ SE
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
G+ ++ + +++++++ G +EEA R +GM D + W+ ++ + G
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 43/289 (14%)
Query: 100 FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK 159
+PE+F + ++ A A + + + + ++F LL YSK G + +
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQP----NLFSWNNLLLAYSKAGLISEMES 93
Query: 160 VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV-----LGAC 214
F+ +P+++ +W LI GYS SGL AV + + +R SANL V L
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM----MRDFSANLTRVTLMTMLKLS 149
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM--------- 265
+ G + G+ I + + G + VG+ L+ MYA G + +A++VF G+
Sbjct: 150 SSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYN 209
Query: 266 ---------------------LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
+E+D V W+AMI+G A NGL +EA++ F EM+ + L+ D
Sbjct: 210 SLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMD 269
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+ VL AC LGA+ G + + F + +G+ALID+Y KC
Sbjct: 270 QYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
N+F L+ Y+K G + E F+ + +RD V W+ +I+GY+ +GL A++ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 298 KE---NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
++ NL ++ +L + G + LG + G + F S ++G+ L+ +YA G
Sbjct: 131 RDFSANLTR--VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 38/327 (11%)
Query: 35 QDNYLVSLVLRSSFHFGNTH-----HPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQ 89
QD+Y ++ L SF +T + +++FD P+TFLWN MIRG +D +
Sbjct: 44 QDSYAITKFL--SFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLL 101
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
LY M ++TF +LKAC+ L F +H+ + K G+ DV+ L+ Y+
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 150 KCGHLRDARKVFDDIP-------------------------------EKNVASWTALICG 178
G+ + A +FD IP EKN SWT +I G
Sbjct: 162 VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISG 221
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y ++ + +EA+ LF + + PD+ +L + L ACA+LG L G+WI Y++++ + +
Sbjct: 222 YVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMD 281
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+G L++MYAKCG MEEA VF + ++ V W+A+I GYA +G REA+ F EMQK
Sbjct: 282 SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 341
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGN 325
++P+ VL+AC+ G ++ G
Sbjct: 342 MGIKPNVITFTAVLTACSYTGLVEEGK 368
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 2/223 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + N W TMI G V D + +QL+H M P++ + L ACA+L
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +HS + KT D + L+ Y+KCG + +A +VF +I +K+V +WTALI G
Sbjct: 263 LEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISG 322
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS-ESGLHR 237
Y+ G EA+ F + +MG++P+ VL AC+ G + G+ I M + L
Sbjct: 323 YAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKP 382
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ +V++ + G ++EA+R M L+ + V W A+++
Sbjct: 383 TIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGF---YSKCGHLRDARKVFDDIPEKNVASWTALICGYSE 181
+H+ ++KTG + D + T L F + L A+ VFD + W +I G+S
Sbjct: 33 IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSC 92
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
S E ++ L++ +L ++ +L AC+ L I +++ G +V+
Sbjct: 93 SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYA 152
Query: 242 GTTLVNMYA-------------------------------KCGSMEEARRVFDGMLERDV 270
+L+N YA K G M+ A +F M E++
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL 330
+ W+ MI GY + +EALQLF EMQ ++ PD ++ LSACA+LGAL+ G
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 331 MDAEEFLSNPVLGTALIDLYAKCGSM 356
++ + VLG LID+YAKCG M
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEM 298
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 153/295 (51%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
FD + W +I I ++ M F P FT +LKAC+
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKAL 300
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G +HSLVVK DVFV T L+ Y+KCG + D RKVFD + +N +WT++I +
Sbjct: 301 RFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ G EEA+ LFR + L ++ +V +L AC +G L G+ + + ++ + +NV
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
++G+TLV +Y KCG +A V + RDVV W+AMI G +S G EAL EM +E
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ P+ F L ACA +L +G + LSN +G+ALI +YAKCG
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCG 535
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 167/318 (52%), Gaps = 2/318 (0%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
Y + ++ S G+ + + +FD NT W MI G + + L+ +
Sbjct: 118 YFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKH 177
Query: 98 GF-FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
G F F +L C+R F LG +H +VK G VG++ VE+ L+ FY++CG L
Sbjct: 178 GIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTS 236
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A + FD + EK+V SWTA+I S G +A+ +F G+L P+ + +L AC+
Sbjct: 237 ALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L GR + + + + +VFVGT+L++MYAKCG + + R+VFDGM R+ V W+++
Sbjct: 297 EKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSI 356
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
I +A G EA+ LF M++ +L + +V +L AC +GAL LG +
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 337 LSNPVLGTALIDLYAKCG 354
N +G+ L+ LY KCG
Sbjct: 417 EKNVYIGSTLVWLYCKCG 434
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 139/265 (52%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD N NT W ++I + I L+ M ++ + T +L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+AC + LG LH+ ++K +V++ + L+ Y KCG RDA V +P ++V
Sbjct: 393 RACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVV 452
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SWTA+I G S G EA+D + +++ G+ P+ L ACA L GR I
Sbjct: 453 SWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
++ NVFVG+ L++MYAKCG + EA RVFD M E+++V W AMI GYA NG REAL
Sbjct: 513 KKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Query: 291 QLFFEMQKENLRPDCFAMVGVLSAC 315
+L + M+ E D + +LS C
Sbjct: 573 KLMYRMEAEGFEVDDYIFATILSTC 597
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 128/234 (54%), Gaps = 2/234 (0%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H++ +K ++ L+ + G L ARKVFD +PEKN +WTA+I GY + GL
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 185 CEEAVDLFRGLLEMGLR-PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
+EA LF ++ G+R + V +L C+R + GR + M + G+ N+ V +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVES 222
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+LV YA+CG + A R FD M E+DV+ W+A+I + G +A+ +F M P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ F + +L AC+ AL+ G + L+ ++ +GT+L+D+YAKCG +
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 173/301 (57%), Gaps = 12/301 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF-PESFTFTFVLKACARLC 117
+F++ +P T+LWN +I+G + F + + + M + G P+ +TF V+K C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
+G ++H LV++ GF DV V T + FY KC L ARKVF ++PE+N SWTAL+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
Y +SG EEA +F + E L +A ++ + GDL + + + M + R
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNA----LVDGLVKSGDLVNAKKLFDEMPK----R 236
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
++ T++++ YAK G M AR +F+ DV WSA+I GYA NG P EA ++F EM
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE--EFLSNPVLGTALIDLYAKCGS 355
+N++PD F MVG++SAC+++G +L + + +F S+ V+ ALID+ AKCG
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGH 355
Query: 356 M 356
M
Sbjct: 356 M 356
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 41/308 (13%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G K +FD N WN ++ G+V + + +L+ M ++
Sbjct: 190 GELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR------------- 236
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
D+ T ++ Y+K G + AR +F++ +V
Sbjct: 237 --------------------------DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+W+ALI GY+++G EA +F + ++PD +V ++ AC+++G +D Y+
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 231 SES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ + +V L++M AKCG M+ A ++F+ M +RD+V + +M++G A +G EA
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE-EFLSNPVLGTALID 348
++LF +M E + PD A +L C + ++ G R LM + L++P + +++
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVN 450
Query: 349 LYAKCGSM 356
L ++ G +
Sbjct: 451 LLSRTGKL 458
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
+Y+V ++ + G+ LF++ + + +M+ GM + C + I+L+ M
Sbjct: 340 HYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 97 QGFFPESFTFTFVLKACAR-------LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
+G P+ FT +LK C + L +F L +S++ + ++ S
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY------SCIVNLLS 453
Query: 150 KCGHLRDARKVFDDIP-EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN-- 206
+ G L++A ++ +P E + ++W +L+ G S G E A + R L E L P SA
Sbjct: 454 RTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE--LEPQSAGSY 511
Query: 207 --LVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
L ++ A R D+ R D+ M+E+G+ +
Sbjct: 512 VLLSNIYAALDRWTDVAHLR--DK-MNENGITK 541
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 164/299 (54%), Gaps = 1/299 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD + + N+ W+ M+ G N + ++L+ M G P +T VL AC+ +C+
Sbjct: 278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICY 337
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G LHS ++K GF +F T L+ Y+K G L DARK FD + E++VA WT+LI G
Sbjct: 338 LEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISG 397
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y ++ EEA+ L+R + G+ P+ + VL AC+ L L G+ + + + G
Sbjct: 398 YVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V +G+ L MY+KCGS+E+ VF +DVV W+AMI G + NG EAL+LF EM
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSM 356
E + PD V ++SAC+ G ++ G +M + L V A ++DL ++ G +
Sbjct: 518 EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 161/292 (55%), Gaps = 2/292 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSM--HQQGFFPESFTFTFVLKACARLCHFHLGHT 124
NT+ W+TM+ G + I++++ ++ + FT VL + A + LG
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H + +K G +G V + L+ YSKC L +A K+FD ++N +W+A++ GYS++G
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
EAV LF + G++P +V VL AC+ + L G+ + ++ + G R++F T
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
LV+MYAK G + +AR+ FD + ERDV W+++I GY N EAL L+ M+ + P+
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
M VL AC+ L L+LG + G F +G+AL +Y+KCGS+
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 159/304 (52%), Gaps = 5/304 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDG---IQLYHSMHQQGFFPESFTFTFVLKACAR 115
+F+ + WN++I G N +QL+ M Q P ++T + KA +
Sbjct: 71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESS 130
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
L +G H+LVVK GD++V+T L+G Y K G + D KVF +PE+N +W+ +
Sbjct: 131 LQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTM 190
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV--HVLGACARLGDLGSGRWIDRYMSES 233
+ GY+ G EEA+ +F L ++ V VL + A +G GR I ++
Sbjct: 191 VSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN 250
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
GL V + LV MY+KC S+ EA ++FD +R+ + WSAM+ GY+ NG EA++LF
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
M ++P + +VGVL+AC+ + L+ G + + F + TAL+D+YAK
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 354 GSMG 357
G +
Sbjct: 371 GCLA 374
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
++ S Q P + T L ++ + G +H +++TG + L+ FY+
Sbjct: 1 MHPSTFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYA 60
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEA---VDLFRGLLEMGLRPDSAN 206
KCG L A +F+ I K+V SW +LI GYS++G + + LFR + + P++
Sbjct: 61 KCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
L + A + L GR + + +++V T+LV MY K G +E+ +VF M
Sbjct: 121 LAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLF--FEMQKENLRPDCFAMVGVLSACARLGALQLG 324
ER+ WS M+ GYA+ G EA+++F F +KE + VLS+ A + LG
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + L L AL+ +Y+KC S+
Sbjct: 241 RQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ L+F +T N + WN MI G+ N + ++L+ M +G P+ TF ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 111 KACARLCHFHLGHTLHSLVV-KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKN 168
AC+ G +++ + G V ++ S+ G L++A++ + +
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
+ W L+ G CE V L+ +G R +S+ V + G LG + + +
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSR-ESSTYVQLSGIYTALGRMRDVERVWK 650
Query: 229 YMSESGLHRNV 239
+M +G+ + V
Sbjct: 651 HMRANGVSKEV 661
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 170/322 (52%), Gaps = 7/322 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LV+ L++ + +FD+ + WN++I G V N G+ ++ M
Sbjct: 234 NSLVAFYLKNQ----RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV-GDVFVETGLLGFYSKCGHLR 155
G + T V CA LG +HS+ VK F D F T LL YSKCG L
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LLDMYSKCGDLD 348
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A+ VF ++ +++V S+T++I GY+ GL EAV LF + E G+ PD + VL CA
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
R L G+ + ++ E+ L ++FV L++MYAKCGSM+EA VF M +D++ W+
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 276 MIQGYASNGLPREALQLF-FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+I GY+ N EAL LF ++++ PD + VL ACA L A G G +
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
+ S+ + +L+D+YAKCG++
Sbjct: 529 GYFSDRHVANSLVDMYAKCGAL 550
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 163/306 (53%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ +FD+ WN ++ + + F I L+ M G +S+TF+ V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K+ + L H G LH ++K+GF V L+ FY K + ARKVFD++ E++V
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW ++I GY +GL E+ + +F +L G+ D A +V V CA + GR +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
++ R TL++MY+KCG ++ A+ VF M +R VV +++MI GYA GL EA+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLY 350
+LF EM++E + PD + + VL+ CAR L G R + + + + AL+D+Y
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 351 AKCGSM 356
AKCGSM
Sbjct: 443 AKCGSM 448
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 2/308 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ K +F + + + + +MI G + ++L+ M ++G P+ +T T VL
Sbjct: 345 GDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVL 404
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CAR G +H + + D+FV L+ Y+KCG +++A VF ++ K++
Sbjct: 405 NCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDII 464
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW +I GYS++ EA+ LF LLE PD + VL ACA L GR I Y
Sbjct: 465 SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 524
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ +G + V +LV+MYAKCG++ A +FD + +D+V W+ MI GY +G +EA
Sbjct: 525 IMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEA 584
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LID 348
+ LF +M++ + D + V +L AC+ G + G R +M E + V A ++D
Sbjct: 585 IALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVD 644
Query: 349 LYAKCGSM 356
+ A+ G +
Sbjct: 645 MLARTGDL 652
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 2/285 (0%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
NT +R ++ + ++L + P T VL+ CA G + + +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
GFV D + + L Y+ CG L++A +VFD++ + W L+ ++SG ++ L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
F+ ++ G+ DS V + + L + G + ++ +SG VG +LV Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
++ AR+VFD M ERDV+ W+++I GY SNGL + L +F +M + D +V V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ CA + LG + F L+D+Y+KCG +
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL 347
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 6/256 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFV 109
G+ +L+F + + WNT+I G N ++ + L++ + ++ F P+ T V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L ACA L F G +H +++ G+ D V L+ Y+KCG L A +FDDI K++
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDR 228
SWT +I GY G +EA+ LF + + G+ D + V +L AC+ G + G R+ +
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNI 625
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASNG 284
E + V +V+M A+ G + +A R + M + D W A++ G +
Sbjct: 626 MRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK 685
Query: 285 LPREALQLFFEMQKEN 300
L + + FE++ EN
Sbjct: 686 LAEKVAEKVFELEPEN 701
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 162/297 (54%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+ N L++ +L + G+ + + +FD+ H P FLWNT+ +G V N + + LY M
Sbjct: 41 EKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM 100
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
G P+ FT+ FV+KA ++L F G LH+ VVK GF V T L+ Y K G L
Sbjct: 101 RDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGEL 160
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
A +F+ + K++ +W A + ++G A++ F + ++ DS +V +L AC
Sbjct: 161 SSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSAC 220
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+LG L G I + + N+ V ++M+ KCG+ E AR +F+ M +R+VV WS
Sbjct: 221 GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWS 280
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
MI GYA NG REAL LF MQ E LRP+ +GVLSAC+ G + G R LM
Sbjct: 281 TMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 123/231 (53%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H++V++TGF + T LL G + AR+VFD++ + + W L GY + L
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
E++ L++ + ++G+RPD V+ A ++LGD G + ++ + G V T
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
LV MY K G + A +F+ M +D+V W+A + G AL+ F +M + ++ D
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
F +V +LSAC +LG+L++G EE N ++ A +D++ KCG+
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 32/215 (14%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GNT ++LF++ N W+TMI G N + + L+ +M +G P TF VL
Sbjct: 259 GNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVL 318
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC+ + G SL+V++ D E
Sbjct: 319 SACSHAGLVNEGKRYFSLMVQSN----------------------------DKNLEPRKE 350
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ ++ SGL EEA + + +M + PD+ +LGACA D+ G+ + +
Sbjct: 351 HYACMVDLLGRSGLLEEAYEFIK---KMPVEPDTGIWGALLGACAVHRDMILGQKVADVL 407
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
E+ + L N+YA G + +V M
Sbjct: 408 VETAPDIGSY-HVLLSNIYAAAGKWDCVDKVRSKM 441
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 172/318 (54%), Gaps = 4/318 (1%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF 100
S +++ F F + +FD+ +T LWNTMI G N+ + + IQ++ + +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 101 P-ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK 159
++ T +L A A L LG +HSL KTG +V TG + YSKCG ++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 160 VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD 219
+F + + ++ ++ A+I GY+ +G E ++ LF+ L+ G R S+ LV ++ L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 220 LGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQG 279
+ + I Y +S + V T L +Y+K +E AR++FD E+ + W+AMI G
Sbjct: 338 IYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
Y NGL +A+ LF EMQK P+ + +LSACA+LGAL LG L+ + +F S+
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 340 PVLGTALIDLYAKCGSMG 357
+ TALI +YAKCGS+
Sbjct: 455 IYVSTALIGMYAKCGSIA 472
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 145/267 (54%), Gaps = 3/267 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + P+ +N MI G N + L+ + G S T ++ H
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSG---H 334
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
L + +H +K+ F+ V T L YSK + ARK+FD+ PEK++ SW A+I G
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+++GL E+A+ LFR + + P+ + +L ACA+LG L G+W+ + + +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
++V T L+ MYAKCGS+ EARR+FD M +++ V W+ MI GY +G +EAL +F+EM
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGN 325
+ P + VL AC+ G ++ G+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGD 541
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLY-HSMHQQGFFPESFTFTF 108
G ++ + +F P+ FL+N ++RG N+ H + ++ H P S T+ F
Sbjct: 65 LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+ A + G +H V G ++ + + ++ Y K + DARKVFD +PEK+
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD 184
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWID 227
W +I GY ++ + E++ +FR L+ E R D+ L+ +L A A L +L G I
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+++G + + +V T +++Y+KCG ++ +F + D+V ++AMI GY SNG
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
+L LF E+ R +V ++ G L L G FLS+ + TAL
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALT 361
Query: 348 DLYAKCGSM 356
+Y+K +
Sbjct: 362 TVYSKLNEI 370
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 3/239 (1%)
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
HL T H+ ++ GF D+ + T L S G + AR +F + +V + L+ G+
Sbjct: 35 HLAQT-HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 180 SESGLCEEAVDLFRGLLE-MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
S + ++ +F L + L+P+S+ + A + D +GR I G
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ +G+ +V MY K +E+AR+VFD M E+D + W+ MI GY N + E++Q+F ++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 299 EN-LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
E+ R D ++ +L A A L L+LG + L S+ + T I LY+KCG +
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/322 (33%), Positives = 175/322 (54%), Gaps = 3/322 (0%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D Y+ +L++ GN + +L+FD +T W TMI G V + +QL++ +
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+ P+ + + VL AC+ L G +H+ +++ G D + L+ Y KCG +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
A K+F+ +P KN+ SWT L+ GY ++ L +EA++LF + + GL+PD +L +C
Sbjct: 301 IAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A L LG G + Y ++ L + +V +L++MYAKC + +AR+VFD DVV ++
Sbjct: 361 ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFN 420
Query: 275 AMIQGYASNGLP---REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
AMI+GY+ G EAL +F +M+ +RP V +L A A L +L L + GLM
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 332 DAEEFLSNPVLGTALIDLYAKC 353
+ G+ALID+Y+ C
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNC 502
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 166/323 (51%), Gaps = 3/323 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D L+++++ S G LF+ N N W T++ G N + ++L+ SM
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ G P+ + + +L +CA L G +H+ +K D +V L+ Y+KC L
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGL---CEEAVDLFRGLLEMGLRPDSANLVHVLG 212
DARKVFD +V + A+I GYS G EA+++FR + +RP V +L
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
A A L LG + I M + GL+ ++F G+ L+++Y+ C ++++R VFD M +D+V
Sbjct: 463 ASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVI 522
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W++M GY EAL LF E+Q RPD F +++A L ++QLG +
Sbjct: 523 WNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLL 582
Query: 333 AEEFLSNPVLGTALIDLYAKCGS 355
NP + AL+D+YAKCGS
Sbjct: 583 KRGLECNPYITNALLDMYAKCGS 605
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 168/325 (51%), Gaps = 11/325 (3%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM- 94
D YL ++++ G + + +F++ N W+TM+ + + + + ++
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 95 HQQGFFPESFTFTFVLKACA------RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
+ P + + ++AC+ R F L S +VK+GF DV+V T L+ FY
Sbjct: 138 RTRKDSPNEYILSSFIQACSGLDGRGRWMVFQL----QSFLVKSGFDRDVYVGTLLIDFY 193
Query: 149 SKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV 208
K G++ AR VFD +PEK+ +WT +I G + G ++ LF L+E + PD L
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
VL AC+ L L G+ I ++ GL + + L++ Y KCG + A ++F+GM +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
+++ W+ ++ GY N L +EA++LF M K L+PD +A +L++CA L AL G +
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 329 GLMDAEEFLSNPVLGTALIDLYAKC 353
++ + +LID+YAKC
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKC 398
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 3/276 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRG---MVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACAR 115
+FD + L+N MI G + H+ + ++ M + P TF +L+A A
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
L L +H L+ K G D+F + L+ YS C L+D+R VFD++ K++ W ++
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
GY + EEA++LF L RPD +++ A L + G+ + + GL
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL 586
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
N ++ L++MYAKCGS E+A + FD RDVVCW+++I YA++G ++ALQ+ +
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
M E + P+ VGVLSAC+ G ++ G + LM
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 137/258 (53%), Gaps = 13/258 (5%)
Query: 104 FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
F L+A L H+ + +H ++ G D ++ L+ YS+ G + ARKVF+
Sbjct: 47 FARLLQLRASDDLLHYQ--NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN---LVHVLGACARLGDL 220
+PE+N+ SW+ ++ + G+ EE++ +F R DS N L + AC+ L
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRT--RKDSPNEYILSSFIQACSGLD-- 160
Query: 221 GSGRW----IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
G GRW + ++ +SG R+V+VGT L++ Y K G+++ AR VFD + E+ V W+ M
Sbjct: 161 GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTM 220
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
I G G +LQLF+++ ++N+ PD + + VLSAC+ L L+ G + +
Sbjct: 221 ISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGL 280
Query: 337 LSNPVLGTALIDLYAKCG 354
+ L LID Y KCG
Sbjct: 281 EMDASLMNVLIDSYVKCG 298
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+L+FD+ + +WN+M G V + + L+ + P+ FTF ++ A L
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG H ++K G + ++ LL Y+KCG DA K FD ++V W ++I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y+ G ++A+ + ++ G+ P+ V VL AC+ G + G M G+
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD-VVCWSAMIQGYASNG 284
+V++ + G + +AR + + M + + W +++ G A G
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
GL + ++ L+N+Y++ G M AR+VF+ M ER++V WS M+ +G+ E+L +F
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 294 FEMQKENL-RPDCFAMVGVLSACA------RLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
E + P+ + + + AC+ R QL + + F + +GT L
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQL----QSFLVKSGFDRDVYVGTLL 189
Query: 347 IDLYAKCGSM 356
ID Y K G++
Sbjct: 190 IDFYLKDGNI 199
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 89/235 (37%), Gaps = 37/235 (15%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
Y+ + +L G+ FD + + WN++I ++ +Q+ M +
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 650
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
G P TF VL AC+ G L+++ G + ++ + G L A
Sbjct: 651 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 158 RKVFDDIPEKNVA-SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
R++ + +P K A W +L+ G +++G V+L EM + D +
Sbjct: 711 RELIEKMPTKPAAIVWRSLLSGCAKAG----NVELAEHAAEMAILSDPKD---------- 756
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
SG + T L N+YA G EA++V + M VV
Sbjct: 757 -----SGSF-----------------TMLSNIYASKGMWTEAKKVRERMKVEGVV 789
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 163/289 (56%), Gaps = 1/289 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF-FPESFTFTFVLKACARLCHFHLGHTL 125
+ ++WN+++ G N FHD ++++ + P+SFTF V+KA L LG +
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H+LVVK+G+V DV V + L+G Y+K ++ +VFD++PE++VASW +I + +SG
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
E+A++LF + G P+S +L + AC+RL L G+ I R + G + +V + L
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
V+MY KC +E AR VF M + +V W++MI+GY + G + +++ M E RP
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ +L AC+R L G G + ++ + +LIDLY KCG
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 155/297 (52%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + WNT+I + ++L+ M GF P S + T + AC+RL
Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H VK GF D +V + L+ Y KC L AR+VF +P K++ +W ++I G
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G + V++ ++ G RP L +L AC+R +L G++I Y+ S ++ +
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
++V +L+++Y KCG A VF + W+ MI Y S G +A++++ +M
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
++PD VL AC++L AL+ G + + ++ +L +AL+D+Y+KCG+
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 160/300 (53%), Gaps = 3/300 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + + WN+MI+G V +++ + M +G P T T +L AC+R +
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H V+++ D++V L+ Y KCG A VF + SW +I
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G +AV+++ ++ +G++PD VL AC++L L G+ I +SES L +
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ + L++MY+KCG+ +EA R+F+ + ++DVV W+ MI Y S+G PREAL F EMQK
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
L+PD ++ VLSAC G + G + M + ++ P++ + +ID+ + G +
Sbjct: 505 FGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS-KYGIEPIIEHYSCMIDILGRAGRL 563
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Query: 48 FHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFT 107
F G + + +F +T WN MI + + +++Y M G P+ TFT
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
VL AC++L G +H + ++ D + + LL YSKCG+ ++A ++F+ IP+K
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWI 226
+V SWT +I Y G EA+ F + + GL+PD L+ VL AC G + G ++
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+ S+ G+ + + ++++ + G + EA + E
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 203 DSANLVHVLGACAR-LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
+S+ L+ +L C L + + + + GL R+V + +L+N+Y C AR V
Sbjct: 2 ESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV 61
Query: 262 FDGM-LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL-RPDCFAMVGVLSACARLG 319
F+ + DV W++++ GY+ N + + L++F + ++ PD F V+ A LG
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
LG L+ ++ + V+ ++L+ +YAK
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 153/269 (56%), Gaps = 1/269 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD + + W MI G V N + + + M + G T VLKA ++
Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVED 219
Query: 119 FHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
G ++H L ++TG V DVF+ + L+ Y KC DA+KVFD++P +NV +WTALI
Sbjct: 220 VRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIA 279
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
GY +S ++ + +F +L+ + P+ L VL ACA +G L GR + YM ++ +
Sbjct: 280 GYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEI 339
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
N GTTL+++Y KCG +EEA VF+ + E++V W+AMI G+A++G R+A LF+ M
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNR 326
++ P+ + VLSACA G ++ G R
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGGLVEEGRR 428
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 176/363 (48%), Gaps = 16/363 (4%)
Query: 3 LELKNLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQ 62
+ELK LL L + ++ +D +L L+ R + + L Q
Sbjct: 2 IELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQ 61
Query: 63 THNPNTFLWNTMIRGMVDNDCFHDGIQL--------YHSMHQQGFFPESFTFTFVLKACA 114
+ LW+++I F GI L Y M + G P TF +LKA
Sbjct: 62 LQTLSIQLWDSLIGH------FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVF 115
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
+L + H+ +VK G D FV L+ YS G A ++FD +K+V +WTA
Sbjct: 116 KLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTA 174
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
+I G+ +G EA+ F + + G+ + +V VL A ++ D+ GR + E+G
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 235 LHR-NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
+ +VF+G++LV+MY KC ++A++VFD M R+VV W+A+I GY + + + +F
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVF 294
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
EM K ++ P+ + VLSACA +GAL G R M N GT LIDLY KC
Sbjct: 295 EEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC 354
Query: 354 GSM 356
G +
Sbjct: 355 GCL 357
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 46/220 (20%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
L+F++ H N + W MI G + D L+++M P TF VL ACA
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA--- 418
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
H G VE G F S G F+ P+ + + ++
Sbjct: 419 --HGG----------------LVEEGRRLFLSMKGR-------FNMEPKAD--HYACMVD 451
Query: 178 GYSESGLCEEAVDLFRGLLE-MGLRPDSANLVHVLGAC-----ARLGDLGSGRWIDRYMS 231
+ GL EEA + L+E M + P + + G+C LG + R I S
Sbjct: 452 LFGRKGLLEEA----KALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPS 507
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
SG + T L N+Y++ + +E RV M ++ VV
Sbjct: 508 HSGRY------TLLANLYSESQNWDEVARVRKQMKDQQVV 541
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 158/300 (52%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
++LF + N F W +I + + M + FP++F V KAC L
Sbjct: 127 EVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGAL 186
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H VVK+G VFV + L Y KCG L DA KVFD+IP++N +W AL+
Sbjct: 187 KWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALM 246
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY ++G EEA+ LF + + G+ P + L A A +G + G+ +G+
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+ +GT+L+N Y K G +E A VFD M E+DVV W+ +I GY GL +A+ + M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ E L+ DC + ++SA AR L+LG + F S+ VL + ++D+YAKCGS+
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 136/249 (54%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + N WN ++ G V N + I+L+ M +QG P T + L A A +
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 289
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G H++ + G D + T LL FY K G + A VFD + EK+V +W +I G
Sbjct: 290 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 349
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y + GL E+A+ + + + L+ D L ++ A AR +L G+ + Y +
Sbjct: 350 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 409
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ + +T+++MYAKCGS+ +A++VFD +E+D++ W+ ++ YA +GL EAL+LF+ MQ
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 299 ENLRPDCFA 307
E + P+
Sbjct: 470 EGVPPNVIT 478
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 156/296 (52%), Gaps = 2/296 (0%)
Query: 61 DQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFH 120
+Q H+P++ + + + N + + L M + + +L+ C
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 121 LGHTLHSLVVKTG--FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H+ ++K G + + ++ET L+ FY+KC L A +F + +NV SW A+I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
GLCE A+ F +LE + PD+ + +V AC L GR + Y+ +SGL
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
VFV ++L +MY KCG +++A +VFD + +R+ V W+A++ GY NG EA++LF +M+K
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ + P + LSA A +G ++ G ++ + + +LGT+L++ Y K G
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 32/322 (9%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
DN L + +L G + +++FD+ + WN +I G V D I + M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ + T ++ A AR + LG + ++ F D+ + + ++ Y+KCG +
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA+KVFD EK++ W L+ Y+ESGL EA+ LF G+ G+ P+ ++ +
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
R G + + + M SG+ N+ TT++N
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN---------------------------- 519
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
G NG EA+ +MQ+ LRP+ F++ LSACA L +L +G G +
Sbjct: 520 ---GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 336 FLSNPV-LGTALIDLYAKCGSM 356
S+ V + T+L+D+YAKCG +
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDI 598
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 6/231 (2%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
+L++ S G K +F Q + PN W TM+ GMV N C + I M +
Sbjct: 480 NLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKT-GFVGDVFVETGLLGFYSKCGHLR 155
G P +F+ T L ACA L H+G T+H +++ V +ET L+ Y+KCG +
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDIN 599
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A KVF + A+I Y+ G +EA+ L+R L +GL+PD+ + +VL AC
Sbjct: 600 KAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACN 659
Query: 216 RLGDLGSGRWI-DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
GD+ I +S+ + + +V++ A G E+A R+ + M
Sbjct: 660 HAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 32/289 (11%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D L S V+ G+ K +FD T + LWNT++ ++ + ++L++
Sbjct: 407 ESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M +G P T+ ++ + R D+F++ G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAK-------------DMFLQMQSSGI------ 507
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
IP N+ SWT ++ G ++G EEA+ R + E GLRP++ ++ L A
Sbjct: 508 ----------IP--NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
Query: 214 CARLGDLGSGRWIDRYMSESGLHRN-VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
CA L L GR I Y+ + H + V + T+LV+MYAKCG + +A +VF L ++
Sbjct: 556 CAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL 615
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL 321
+AMI YA G +EA+ L+ ++ L+PD + VLSAC G +
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 160/301 (53%), Gaps = 2/301 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFVLKACARLC 117
+FD+ P+ W++M+ G N + ++ + M P+ T ++ AC +L
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLS 177
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
+ LG +H V++ GF D+ + LL Y+K ++A +F I EK+V SW+ +I
Sbjct: 178 NSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
Y ++G EA+ +F +++ G P+ A ++ VL ACA DL GR GL
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
V V T LV+MY KC S EEA VF + +DVV W A+I G+ NG+ +++ F M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML 357
Query: 298 KE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
E N RPD MV VL +C+ LG L+ + F SNP +G +L++LY++CGS+
Sbjct: 358 LENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSL 417
Query: 357 G 357
G
Sbjct: 418 G 418
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 157/302 (51%), Gaps = 5/302 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + W+T+I V N + + +++ M G P T VL+ACA
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G H L ++ G +V V T L+ Y KC +A VF IP K+V SW ALI G
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 179 YSESGLCEEAVDLFR-GLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
++ +G+ +++ F LLE RPD+ +V VLG+C+ LG L + Y+ + G
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
N F+G +LV +Y++CGS+ A +VF+G+ +D V W+++I GY +G +AL+ F M
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 298 KEN-LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
K + ++P+ + +LSAC+ G + G R LM ++ P L L+DL + G
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM-VNDYRLAPNLEHYAVLVDLLGRVG 518
Query: 355 SM 356
+
Sbjct: 519 DL 520
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 164/308 (53%), Gaps = 2/308 (0%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
F ++ + +F + + + WNT+++ + + + + + M + P++FT
Sbjct: 7 FSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA 66
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
LKAC L + G +H V K +G D++V + L+ Y KCG + +A ++FD++ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 169 VASWTALICGYSESGLCEEAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+ +W++++ G+ ++G +AV+ FR + + + PD L+ ++ AC +L + GR +
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
++ G ++ + +L+N YAK + +EA +F + E+DV+ WS +I Y NG
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
EAL +F +M + P+ ++ VL ACA L+ G + L + + + TAL+
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 348 DLYAKCGS 355
D+Y KC S
Sbjct: 307 DMYMKCFS 314
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 113/210 (53%), Gaps = 2/210 (0%)
Query: 145 LGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
+GF K DAR++F ++ ++++ W L+ S EE + F + +PD+
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
L L AC L ++ G I ++ + L +++VG++L+ MY KCG M EA R+FD
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQ 322
+ + D+V WS+M+ G+ NG P +A++ F M ++ PD ++ ++SAC +L +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
LG G + F ++ L +L++ YAK
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAK 210
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
K S +AR++F M +R + W+ +++ + E L F M ++ +PD F +
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFL-SNPVLGTALIDLYAKCGSM 356
L AC L + G G + + L S+ +G++LI +Y KCG M
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRM 112
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 166/302 (54%), Gaps = 11/302 (3%)
Query: 59 LFDQ--THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+FD+ + + F WN++I G + + D + LY M + G P+ FTF VLKAC +
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+G +H +VK GF DV+V L+ Y+KCG + AR VFD IP K+ SW +++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY GL EA+D+FR +++ G+ PD + VL AR+ GR + ++ G+
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+ V L+ +Y+K G + +A +FD MLERD V W+A+I ++ N L+ F +M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQM 382
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+ N +PD V VLS CA G ++ G R LM ++E+ +P + +++LY + G
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM-SKEYGIDPKMEHYACMVNLYGRAG 441
Query: 355 SM 356
M
Sbjct: 442 MM 443
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 139/265 (52%), Gaps = 6/265 (2%)
Query: 96 QQGF-FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
Q+G E F +L+ C L G +H L+ ++ + + L+ Y+ CG+
Sbjct: 84 QKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYA 143
Query: 155 RDARKVFDDIPEKNVA--SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
A +VFD + +++ + +W +LI GY+E G E+A+ L+ + E G++PD VL
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
AC +G + G I R + + G +V+V LV MYAKCG + +AR VFD + +D V
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W++M+ GY +GL EAL +F M + + PD A+ VL AR+ + + G + G +
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVI 320
Query: 333 AEEFLSNPVLGTALIDLYAKCGSMG 357
+ ALI LY+K G +G
Sbjct: 321 RRGMEWELSVANALIVLYSKRGQLG 345
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 12/271 (4%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+++ ++ G+ + +FD + + WN+M+ G + + H+ + ++ M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
Q G P+ + VL AR+ F G LH V++ G ++ V L+ YSK G L
Sbjct: 289 QNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLG 345
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A +FD + E++ SW A+I +S++ + F + +PD V VL CA
Sbjct: 346 QACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCA 402
Query: 216 RLGDLGSGRWIDRYMS-ESGLHRNVFVGTTLVNMYAKCGSMEEARR--VFDGMLERDVVC 272
G + G + MS E G+ + +VN+Y + G MEEA V + LE
Sbjct: 403 NTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTV 462
Query: 273 WSAMIQG---YASNGLPREALQLFFEMQKEN 300
W A++ + + + A Q FE++ +N
Sbjct: 463 WGALLYACYLHGNTDIGEVAAQRLFELEPDN 493
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 163/338 (48%), Gaps = 63/338 (18%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ +PN F N++IR ++ + ++ M FP+ ++FTFVLKACA C
Sbjct: 96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCG 155
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP------------- 165
F G +H L +K+G V DVFVE L+ Y + G+ ARKV D +P
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 166 ------------------EKNVASWTALICGYSESGLCEEAVDLF--------------- 192
E+NV SW +I GY+ +GL +EA ++F
Sbjct: 216 YLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMV 275
Query: 193 -----------------RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ L + +PD LV VL ACA LG L G W+ Y+ + G+
Sbjct: 276 TAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGI 335
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
F+ T LV+MY+KCG +++A VF +RDV W+++I + +GL ++AL++F E
Sbjct: 336 EIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSE 395
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
M E +P+ +GVLSAC +G L + +M +
Sbjct: 396 MVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSS 433
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 111/232 (47%), Gaps = 11/232 (4%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRD---ARKVFDDIPEKNVASWTALICGYSES 182
H+ ++KTG D F + L+ F + + A + + I N + ++I Y+ S
Sbjct: 59 HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANS 118
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
E A+ +FR +L + PD + VL ACA GR I +SGL +VFV
Sbjct: 119 STPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVE 178
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
TLVN+Y + G E AR+V D M RD V W++++ Y GL EA LF EM++ N+
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
F + G +A L AK + D+ + + V A++ YA G
Sbjct: 239 SWNFMISGYAAA-------GLVKEAKEVFDSMP-VRDVVSWNAMVTAYAHVG 282
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF-FPESFTFTFV 109
G K +FD + WN M+ C+++ +++++ M P+ FT V
Sbjct: 251 GLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSV 310
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L ACA L G +H + K G + F+ T L+ YSKCG + A +VF +++V
Sbjct: 311 LSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDV 370
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
++W ++I S GL ++A+++F ++ G +P+ + VL AC +G L R +
Sbjct: 371 STWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEM 430
Query: 230 MSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
MS + + +V++ + G +EEA + N +P +
Sbjct: 431 MSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV--------------------NEIPAD 470
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+ E +L AC R G L+ R
Sbjct: 471 EASILLE--------------SLLGACKRFGQLEQAER 494
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 166/331 (50%), Gaps = 44/331 (13%)
Query: 67 NTFLWNTMIRGMVDNDCF---HDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+FLWN +IR +V N H I +Y M P+ TF F+L + H LG
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD-------------------- 163
H+ ++ G D FV T LL YS CG LR A++VFDD
Sbjct: 83 RTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAG 142
Query: 164 -----------IPEKNVASWTALICGYSESGLCEEAVDLFRGLL-----EMGLRPDSANL 207
+PE+NV SW+ LI GY G +EA+DLFR + E +RP+ +
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-L 266
VL AC RLG L G+W+ Y+ + + ++ +GT L++MYAKCGS+E A+RVF+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGN 325
++DV +SAMI A GL E QLF EM +N+ P+ VG+L AC G + G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 326 RAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+M EEF P + ++DLY + G
Sbjct: 323 SYFKMM-IEEFGITPSIQHYGCMVDLYGRSG 352
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS 254
+L GL D +L + GDL S + R +SG +++ ++VN YAK G
Sbjct: 88 ILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ---RVFDDSG-SKDLPAWNSVVNAYAKAGL 143
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ--KEN---LRPDCFAMV 309
+++AR++FD M ER+V+ WS +I GY G +EAL LF EMQ K N +RP+ F M
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
VLSAC RLGAL+ G +D + VLGTALID+YAKCGS+
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 9/232 (3%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH----QQGFF-PESFTFTFVLK 111
+ LFD+ N W+ +I G V + + + L+ M + F P FT + VL
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI-PEKNVA 170
AC RL G +H+ + K D+ + T L+ Y+KCG L A++VF+ + +K+V
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVK 267
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSGR-WIDR 228
+++A+IC + GL +E LF + + P+S V +LGAC G + G+ +
Sbjct: 268 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 327
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ E G+ ++ +V++Y + G ++EA M +E DV+ W +++ G
Sbjct: 328 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 175/321 (54%), Gaps = 2/321 (0%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D++ VS +L S + + +F+ N N F++NTMIRG +D +++ +
Sbjct: 58 KDDFAVSKLLAFSSVL-DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL 116
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+G + F+F LK+C+R +G LH + +++GF+ + L+ FY CG +
Sbjct: 117 RAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKI 176
Query: 155 RDARKVFDDIPEK-NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
DARKVFD++P+ + +++ L+ GY + A+DLFR + + + + + L+ L A
Sbjct: 177 SDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSA 236
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
+ LGDL + GL ++ + T L+ MY K G + ARR+FD + +DVV W
Sbjct: 237 ISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTW 296
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+ MI YA GL E + L +M+ E ++P+ VG+LS+CA A +G L++
Sbjct: 297 NCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 334 EEFLSNPVLGTALIDLYAKCG 354
E + +LGTAL+D+YAK G
Sbjct: 357 ERIALDAILGTALVDMYAKVG 377
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 4/310 (1%)
Query: 51 GNTHHPKLLFDQ-THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
G + +FD+ + + ++T++ G + + L+ M + T
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L A + L + H L +K G D+ + T L+G Y K G + AR++FD K+V
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+W +I Y+++GL EE V L R + ++P+S+ V +L +CA GR +
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL 353
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ E + + +GT LV+MYAK G +E+A +F+ M ++DV W+AMI GY ++GL REA
Sbjct: 354 LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREA 413
Query: 290 LQLFFEMQKEN--LRPDCFAMVGVLSACARLGALQLGNRA-KGLMDAEEFLSNPVLGTAL 346
+ LF +M++EN +RP+ + VL+AC+ G + G R K +++A F +
Sbjct: 414 VTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV 473
Query: 347 IDLYAKCGSM 356
+DL + G +
Sbjct: 474 VDLLGRAGQL 483
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%)
Query: 196 LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSM 255
LE L P L++ L +C D I YM ++GL ++ F + L+ ++ +
Sbjct: 20 LESLLSPQCQKLINDLRSCR---DTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDI 75
Query: 256 EEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
A +F+ + ++ ++ MI+GY+ + P A +F +++ + L D F+ + L +C
Sbjct: 76 RYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSC 135
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+R + +G G+ F+ L ALI Y CG +
Sbjct: 136 SRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKIS 177
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 167/325 (51%), Gaps = 34/325 (10%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM--HQQGFFPESFTFTF 108
+ ++ L+F + ++ N F+WNT+IRG + I ++ M P+ T+
Sbjct: 72 SDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVET--------------------GLLGF- 147
V KA RL G LH +V+K G D F+ G++GF
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 148 ----------YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE 197
++KCG + A+ +FD++P++N SW ++I G+ +G ++A+D+FR + E
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 198 MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEE 257
++PD +V +L ACA LG GRWI Y+ + N V T L++MY KCG +EE
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 258 ARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
VF+ ++ + CW++MI G A+NG A+ LF E+++ L PD + +GVL+ACA
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVL 342
G + + LM E+++ P +
Sbjct: 372 SGEVHRADEFFRLMK-EKYMIEPSI 395
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 129/266 (48%), Gaps = 38/266 (14%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD---ARKVFDDIPEKNVASWTALICGYSE 181
+H+ ++KTG + D + +L F C D A VF I KN W +I G+S
Sbjct: 44 IHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 182 SGLCEEAVDLFRGLL--EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
S E A+ +F +L ++P V A RLG GR + + + GL +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS----------------- 282
F+ T+++MY CG + EA R+F GM+ DVV W++MI G+A
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 283 --------------NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
NG ++AL +F EMQ+++++PD F MV +L+ACA LGA + G
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 329 GLMDAEEFLSNPVLGTALIDLYAKCG 354
+ F N ++ TALID+Y KCG
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCG 307
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 1/307 (0%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
G + + +FD+ ++N+MI + ++LY M + P+S TFT
Sbjct: 63 IGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMT 122
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
+KAC G + V G+ DVFV + +L Y KCG + +A +F + +++V
Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV 182
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
WT ++ G++++G +AV+ +R + G D ++ +L A LGD GR + Y
Sbjct: 183 ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGY 242
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ +GL NV V T+LV+MYAK G +E A RVF M+ + V W ++I G+A NGL +A
Sbjct: 243 LYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKA 302
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ EMQ +PD +VGVL AC+++G+L+ G + L + V TAL+D+
Sbjct: 303 FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL-DRVTATALMDM 361
Query: 350 YAKCGSM 356
Y+KCG++
Sbjct: 362 YSKCGAL 368
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 8/323 (2%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D ++ S VL G ++LF + + W TM+ G ++ Y M
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+GF + +L+A L +G ++H + +TG +V VET L+ Y+K G +
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A +VF + K SW +LI G++++GL +A + + +G +PD LV VL AC+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVF---VGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
++G L +GR + Y+ L R+V T L++MY+KCG++ +R +F+ + +D+VC
Sbjct: 330 QVGSLKTGRLVHCYI----LKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVC 385
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM- 331
W+ MI Y +G +E + LF +M + N+ PD +LSA + G ++ G +M
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 332 DAEEFLSNPVLGTALIDLYAKCG 354
+ + + LIDL A+ G
Sbjct: 446 NKYKIQPSEKHYVCLIDLLARAG 468
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 139/262 (53%), Gaps = 6/262 (2%)
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG-FVGDVFVETGLLGFYSKCG 152
+H+ P+ F L++ ++L H+ +H+ V+ TG + + L+ + G
Sbjct: 10 LHRTLLCPKRIKF---LQSISKLKR-HITQ-IHAFVISTGNLLNGSSISRDLIASCGRIG 64
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ ARKVFD++P++ V+ + ++I YS +E + L+ ++ ++PDS+ +
Sbjct: 65 EISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIK 124
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
AC L G + + G +VFV ++++N+Y KCG M+EA +F M +RDV+C
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVIC 184
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+ M+ G+A G +A++ + EMQ E D M+G+L A LG ++G G +
Sbjct: 185 WTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLY 244
Query: 333 AEEFLSNPVLGTALIDLYAKCG 354
N V+ T+L+D+YAK G
Sbjct: 245 RTGLPMNVVVETSLVDMYAKVG 266
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 36/329 (10%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGM--VDNDCFHD-GIQL 90
++DN V+ + + + G+ + +F PNT+L NTMIR + +D H I +
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 91 YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
Y + P++FTF FVLK R+ G +H VV GF V V TGL+ Y
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 151 CGHLRDARKVFDDIPEKNV---------------------------------ASWTALIC 177
CG L DARK+FD++ K+V SWT +I
Sbjct: 164 CGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVIS 223
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
GY++SG EA+++F+ +L + PD L+ VL ACA LG L G I Y+ G++R
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR 283
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
V + +++MYAK G++ +A VF+ + ER+VV W+ +I G A++G EAL +F M
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNR 326
K +RP+ + +LSAC+ +G + LG R
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 118/267 (44%), Gaps = 36/267 (13%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYS---ES 182
H ++ TG D + S GHLR A VF P N +I S E
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEP 94
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
A+ ++R L + +PD+ VL R+ D+ GR I + G +V V
Sbjct: 95 NAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVV 154
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDV-------------------------------- 270
T L+ MY CG + +AR++FD ML +DV
Sbjct: 155 TGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 271 -VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
V W+ +I GYA +G EA+++F M EN+ PD ++ VLSACA LG+L+LG R
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSM 356
+D L A+ID+YAK G++
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNI 301
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 159/305 (52%), Gaps = 2/305 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF--FPESFTFTF 108
G+ + + LF++ + +N +IR V +HD I ++ M +G P+ +T+ F
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
V KA L LG +H ++++ F D +V+ LL Y G + AR VFD + ++
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 182
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V SW +I GY +G +A+ +F ++ + D A +V +L C L DL GR + +
Sbjct: 183 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 242
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ E L + V LVNMY KCG M+EAR VFD M RDV+ W+ MI GY +G
Sbjct: 243 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 302
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
AL+L MQ E +RP+ + ++S C + G G ++ S+ ++ T+LI
Sbjct: 303 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 362
Query: 349 LYAKC 353
+YAKC
Sbjct: 363 MYAKC 367
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 162/322 (50%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D Y+ + +L +FG + +FD N + WNTMI G N +D + ++ M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+ + T +L C L +G +H LV + + V+ L+ Y KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
+AR VFD + ++V +WT +I GY+E G E A++L R + G+RP++ + ++ C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+ G+ + + ++ ++ + T+L++MYAKC ++ RVF G + WS
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
A+I G N L +AL LF M++E++ P+ + +L A A L L+ +
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
F+S+ T L+ +Y+KCG++
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTL 471
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 161/325 (49%), Gaps = 9/325 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LV++ L+ G + +FD+ + W MI G ++ + ++L M
Sbjct: 257 NALVNMYLKC----GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+G P + T ++ C + G LH V+ D+ +ET L+ Y+KC +
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
+VF + + W+A+I G ++ L +A+ LF+ + + P+ A L +L A A
Sbjct: 373 CFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE----RDVVC 272
L DL I Y++++G ++ T LV++Y+KCG++E A ++F+G+ E +DVV
Sbjct: 433 LADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL 492
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG-NRAKGLM 331
W A+I GY +G ALQ+F EM + + P+ L+AC+ G ++ G + ++
Sbjct: 493 WGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML 552
Query: 332 DAEEFLSNPVLGTALIDLYAKCGSM 356
+ + L+ T ++DL + G +
Sbjct: 553 EHYKTLARSNHYTCIVDLLGRAGRL 577
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
LH V+ G V + T L Y+ CGH+ ARK+F+++P+ ++ S+ +I Y GL
Sbjct: 37 LHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 185 CEEAVDLFRGLLEMGLR--PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
+A+ +F ++ G++ PD V A L + G + + S R+ +V
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
L+ MY G +E AR VFD M RDV+ W+ MI GY NG +AL +F M E++
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
D +V +L C L L++G L++ + + AL+++Y KCG M
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 172/344 (50%), Gaps = 52/344 (15%)
Query: 35 QDNYLVSLVLR----SSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMV--DNDCFHDGI 88
+D + +LR S H + + +F+Q N F WNT+IRG D D I
Sbjct: 53 RDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAI 112
Query: 89 QLYHSMHQQGFF-PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
L++ M F P FTF VLKACA+ G +H L +K GF GD FV + L+
Sbjct: 113 TLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRM 172
Query: 148 YSKCGHLRDAR---------------------------------------------KVFD 162
Y CG ++DAR +FD
Sbjct: 173 YVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFD 232
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ +++V SW +I GYS +G ++AV++FR + + +RP+ LV VL A +RLG L
Sbjct: 233 KMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLEL 292
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G W+ Y +SG+ + +G+ L++MY+KCG +E+A VF+ + +V+ WSAMI G+A
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+G +A+ F +M++ +RP A + +L+AC+ G ++ G R
Sbjct: 353 HGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRR 396
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 52/282 (18%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCG-HLRD---ARKVFDDIPEKNVASWTALICGYS 180
+H++ +K+G + D +L F + H RD A K+F+ +P++N SW +I G+S
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 181 ESGLCEE--AVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
ES + A+ LF ++ + + P+ VL ACA+ G + G+ I + G
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGG 161
Query: 238 NVFVGTTLVNMYAKCGSMEEAR-------------------------------------- 259
+ FV + LV MY CG M++AR
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 260 -------RVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
+FD M +R VV W+ MI GY+ NG ++A+++F EM+K ++RP+ +V VL
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 313 SACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
A +RLG+L+LG + + VLG+ALID+Y+KCG
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 121/241 (50%), Gaps = 2/241 (0%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
L ++++ G+ ++LFD+ + WNTMI G N F D ++++ M +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P T VL A +RL LG LH +G D + + L+ YSKCG + A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
VF+ +P +NV +W+A+I G++ G +A+D F + + G+RP +++L AC+ G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 219 DLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAM 276
+ G R+ + +S GL + +V++ + G ++EA M ++ D V W A+
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 277 I 277
+
Sbjct: 450 L 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 232 ESGLHRNVFVGTTLVNMYAKCG----SMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+SG R+ ++ A ++ A ++F+ M +R+ W+ +I+G++ + +
Sbjct: 48 KSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDK 107
Query: 288 E--ALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
A+ LF+EM E + P+ F VL ACA+ G +Q G + GL F + + +
Sbjct: 108 ALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMS 167
Query: 345 ALIDLYAKCGSM 356
L+ +Y CG M
Sbjct: 168 NLVRMYVMCGFM 179
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 184/353 (52%), Gaps = 7/353 (1%)
Query: 9 LMQGLKSFNQVKVAHXXXXXXXXXXHQD--NYLVSLVLRSSFHFGNTHHPKLLFDQ-THN 65
++QG S +++ H H N+L+ S G+ H +LLFD +
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVT--GSLSHAQLLFDHFDSD 68
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF-PESFTFTFVLKACARLCHFHLGHT 124
P+T WN +IRG ++ + I Y+ M P+ FTF F LK+C R+
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H V+++GF+ D V T L+ YS G + A KVFD++P +++ SW +IC +S GL
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
+A+ +++ + G+ DS LV +L +CA + L G + R + VFV
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
L++MYAKCGS+E A VF+GM +RDV+ W++MI GY +G EA+ F +M +RP+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSM 356
+G+L C+ G ++ G +M ++ L+ V ++DLY + G +
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 164/299 (54%), Gaps = 5/299 (1%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD + W +M+ G V ++++ M G FT + +KAC+ L
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG H +V+ GF + F+ + L Y DAR+VFD++PE +V WTA++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 177 CGYSESGLCEEAVDLFRGLLE-MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+S++ L EEA+ LF + GL PD + VL AC L L G+ I + +G+
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
NV V ++L++MY KCGS+ EAR+VF+GM +++ V WSA++ GY NG +A+++F E
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M++++L CF VL ACA L A++LG G N ++ +ALIDLY K G
Sbjct: 357 MEEKDLY--CFGT--VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 172/326 (52%), Gaps = 17/326 (5%)
Query: 37 NYLVSLVLRSSFHFGNTHHP---KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
N+ +S L ++ +G P + +FD+ P+ W ++ ND + + + L+++
Sbjct: 197 NHFISSTL--AYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYA 254
Query: 94 MHQ-QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
MH+ +G P+ TF VL AC L G +H ++ G +V VE+ LL Y KCG
Sbjct: 255 MHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCG 314
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+R+AR+VF+ + +KN SW+AL+ GY ++G E+A+++FR + E D VL
Sbjct: 315 SVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLK 370
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
ACA L + G+ I G NV V + L+++Y K G ++ A RV+ M R+++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+AM+ A NG EA+ F +M K+ ++PD + + +L+AC G + G LM
Sbjct: 431 WNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM- 489
Query: 333 AEEFLSNPVLGTA----LIDLYAKCG 354
A+ + P GT +IDL + G
Sbjct: 490 AKSYGIKP--GTEHYSCMIDLLGRAG 513
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 141/273 (51%), Gaps = 2/273 (0%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
+ I++ +S H + +L+ C ++ F G H+ VVK+G D V LL
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 146 GFYSKCGH-LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
Y K G +R+ R+VFD K+ SWT+++ GY +A+++F ++ GL +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
L + AC+ LG++ GR + G N F+ +TL +Y +ARRVFD
Sbjct: 164 FTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDE 223
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQL 323
M E DV+CW+A++ ++ N L EAL LF+ M + + L PD VL+AC L L+
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G G + SN V+ ++L+D+Y KCGS+
Sbjct: 284 GKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 14/240 (5%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +F+ N+ W+ ++ G N I+++ M ++ + F VL
Sbjct: 314 GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVL 369
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KACA L LG +H V+ G G+V VE+ L+ Y K G + A +V+ + +N+
Sbjct: 370 KACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI 429
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+W A++ +++G EEAV F +++ G++PD + + +L AC G + GR M
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 231 SES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-----DVVCWSAMIQGYASNG 284
++S G+ + ++++ + G EEA + +LER D W ++ A+N
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEA----ENLLERAECRNDASLWGVLLGPCAANA 545
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 10/302 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F +P TF +NTMIRG V+ F + + Y+ M Q+G P++FT+ +LKAC RL
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS 147
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H V K G DVFV+ L+ Y +CG + + VF+ + K ASW++++
Sbjct: 148 IREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA 207
Query: 179 YSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
+ G+ E + LFRG+ E L+ + + +V L ACA G L G I ++ +
Sbjct: 208 RAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL 267
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
N+ V T+LV+MY KCG +++A +F M +R+ + +SAMI G A +G AL++F +M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-----LIDLYAK 352
KE L PD V VL+AC+ G ++ G R + AE V TA L+DL +
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRR----VFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 353 CG 354
G
Sbjct: 384 AG 385
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 149 SKCGH------LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRP 202
+KC H + A +F I + + +I GY EEA+ + +++ G P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 203 DSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
D+ +L AC RL + G+ I + + GL +VFV +L+NMY +CG ME + VF
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 263 DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGAL 321
+ + + WS+M+ A G+ E L LF M E NL+ + MV L ACA GAL
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 322 QLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
LG G + N ++ T+L+D+Y KCG +
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 166/300 (55%), Gaps = 3/300 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF+ P+ ++N+M RG + L+ + + G P+++TF +LKACA
Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 144
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G LH L +K G +V+V L+ Y++C + AR VFD I E V + A+I G
Sbjct: 145 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITG 204
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+ EA+ LFR + L+P+ L+ VL +CA LG L G+WI +Y + +
Sbjct: 205 YARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V V T L++M+AKCGS+++A +F+ M +D WSAMI YA++G +++ +F M+
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT--ALIDLYAKCGSM 356
EN++PD +G+L+AC+ G ++ G + M +F P + +++DL ++ G++
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM-VSKFGIVPSIKHYGSMVDLLSRAGNL 383
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 114/200 (57%)
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
AR +F+ + E ++ + ++ GYS E LF +LE G+ PD+ +L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L GR + + GL NV+V TL+NMY +C ++ AR VFD ++E VVC++AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
I GYA P EAL LF EMQ + L+P+ ++ VLS+CA LG+L LG F
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 337 LSNPVLGTALIDLYAKCGSM 356
+ TALID++AKCGS+
Sbjct: 262 CKYVKVNTALIDMFAKCGSL 281
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 5/245 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD+ P +N MI G + ++ + L+ M + P T VL +CA L
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG +H K F V V T L+ ++KCG L DA +F+ + K+ +W+A+I
Sbjct: 244 GSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMI 303
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSESGL 235
Y+ G E+++ +F + ++PD + +L AC+ G + GR + + +S+ G+
Sbjct: 304 VAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI 363
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG---LPREALQ 291
++ ++V++ ++ G++E+A D + + + W ++ +S+ L + +
Sbjct: 364 VPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSE 423
Query: 292 LFFEM 296
FE+
Sbjct: 424 RIFEL 428
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 203 DSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC---GSMEEAR 259
++ N + ++ C L +L I Y +S + FV L+N + SM AR
Sbjct: 28 NTQNPILLISKCNSLRELMQ---IQAYAIKSHIEDVSFVAK-LINFCTESPTESSMSYAR 83
Query: 260 RVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+F+ M E D+V +++M +GY+ P E LF E+ ++ + PD + +L ACA
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
AL+ G + L N + LI++Y +C
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 166/308 (53%), Gaps = 9/308 (2%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS-MHQQGFFPESFTFT 107
+ GN + FD N + + WN MI G + I+ + M G P+ TF
Sbjct: 98 YLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFP 157
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
VLKAC + G+ +H L +K GF+ DV+V L+ YS+ + +AR +FD++P +
Sbjct: 158 SVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 214
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
++ SW A+I GY +SG +EA+ L GL M DS +V +L AC GD G I
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
Y + GL +FV L+++YA+ G + + ++VFD M RD++ W+++I+ Y N P
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL-MDAEEFLSNPVLGTAL 346
A+ LF EM+ ++PDC ++ + S ++LG ++ +G + FL + +G A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 347 IDLYAKCG 354
+ +YAK G
Sbjct: 391 VVMYAKLG 398
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 166/323 (51%), Gaps = 6/323 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ + ++ + + ++LFD+ + WN MI G + + + L + +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+S T +L AC F+ G T+HS +K G ++FV L+ Y++ G LR
Sbjct: 244 AM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
D +KVFD + +++ SW ++I Y + A+ LF+ + ++PD L+ + +
Sbjct: 300 DCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 216 RLGDLGSGRWIDRYMSESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+LGD+ + R + + G ++ +G +V MYAK G ++ AR VF+ + DV+ W+
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWN 419
Query: 275 AMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+I GYA NG EA++++ M++E + + V VL AC++ GAL+ G + G +
Sbjct: 420 TIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 334 EEFLSNPVLGTALIDLYAKCGSM 356
+ + T+L D+Y KCG +
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRL 502
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTF 108
FG + +FD+ + + WN++I+ N+ I L+ M P+ T
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 109 VLKACARLCHFHLGHTLHSLVVKTG-FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
+ ++L ++ ++ G F+ D+ + ++ Y+K G + AR VF+ +P
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWI 226
+V SW +I GY+++G EA++++ + E G + + V VL AC++ G L G +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
+ ++GL+ +VFV T+L +MY KCG +E+A +F + + V W+ +I + +G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--T 344
+A+ LF EM E ++PD V +LSAC+ G + G +M + ++ P L
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT-PSLKHYG 592
Query: 345 ALIDLYAKCGSM 356
++D+Y + G +
Sbjct: 593 CMVDMYGRAGQL 604
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG-FFPESFTFTF 108
G + +F+ N + WNT+I G N + I++Y+ M ++G T+
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
VL AC++ G LH ++K G DVFV T L Y KCG L DA +F IP N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
W LI + G E+AV LF+ +L+ G++PD V +L AC+ G + G+W
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 229 YM-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG-- 284
M ++ G+ ++ +V+MY + G +E A + M L+ D W A++ +G
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 285 -LPREALQLFFEMQKENL 301
L + A + FE++ E++
Sbjct: 637 DLGKIASEHLFEVEPEHV 654
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 118/239 (49%), Gaps = 20/239 (8%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
LH+ +V + + +V + L+ Y G++ AR FD I ++V +W +I GY +G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 185 CEEAVDLFR-GLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
E + F +L GL PD VL AC + D G I + G +V+V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+L+++Y++ ++ AR +FD M RD+ W+AMI GY +G +EAL L LR
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRA 244
Query: 304 -DCFAMVGVLSACARLGALQLG-----NRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
D +V +LSAC G G K +++E F+SN LIDLYA+ G +
Sbjct: 245 MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK-----LIDLYAEFGRL 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF-FE 295
+NV + LVN+Y G++ AR FD + RDV W+ MI GY G E ++ F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M L PD VL AC + GN+ L F+ + + +LI LY++ +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 356 MG 357
+G
Sbjct: 201 VG 202
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 4/307 (1%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTF 108
H G+ K LFDQ + WNTMI G + ++L + M G P+ TF
Sbjct: 194 HVGDA---KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
L +C +G LH +VKTGF D+ ++T L+ Y KCG + +V + IP K+
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V WT +I G G E+A+ +F +L+ G S + V+ +CA+LG G +
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
Y+ G + +L+ MYAKCG ++++ +F+ M ERD+V W+A+I GYA N +
Sbjct: 371 YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCK 430
Query: 289 ALQLFFEMQKENLRP-DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
AL LF EM+ + ++ D F +V +L AC+ GAL +G ++ ++ TAL+
Sbjct: 431 ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALV 490
Query: 348 DLYAKCG 354
D+Y+KCG
Sbjct: 491 DMYSKCG 497
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 3/267 (1%)
Query: 88 IQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
+ + SM P++FTF +LKACA L G ++H V+ GF D ++ + L+
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 148 YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
Y+K G L ARKVF+++ E++V WTA+I YS +G+ EA L + G++P L
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+ +L + L + + + G ++ V +++N+Y KC + +A+ +FD M +
Sbjct: 151 LEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA 327
RD+V W+ MI GYAS G E L+L + M+ + LRPD LS + L++G
Sbjct: 208 RDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
Query: 328 KGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ F + L TALI +Y KCG
Sbjct: 268 HCQIVKTGFDVDMHLKTALITMYLKCG 294
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ S ++ FG H + +F++ + W MI + L + M
Sbjct: 80 DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
QG P T +L + LH V GF D+ V +L Y KC H+
Sbjct: 140 FQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA+ +FD + ++++ SW +I GY+ G E + L + GLRPD L
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+ DL GR + + ++G ++ + T L+ MY KCG E + RV + + +DVVCW+
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTV 316
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI G G +AL +F EM + A+ V+++CA+LG+ LG G +
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 336 F-LSNPVLGTALIDLYAKCG 354
+ L P L + LI +YAKCG
Sbjct: 377 YTLDTPALNS-LITMYAKCG 395
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 148/298 (49%), Gaps = 17/298 (5%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H L+++ L+ G + + N + W MI G++ + ++
Sbjct: 281 HLKTALITMYLKC----GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE 336
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M Q G S V+ +CA+L F LG ++H V++ G+ D L+ Y+KCGH
Sbjct: 337 MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGH 396
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL---EMGLRP----DSAN 206
L + +F+ + E+++ SW A+I GY+++ VDL + LL EM + DS
Sbjct: 397 LDKSLVIFERMNERDLVSWNAIISGYAQN------VDLCKALLLFEEMKFKTVQQVDSFT 450
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
+V +L AC+ G L G+ I + S + V T LV+MY+KCG +E A+R FD +
Sbjct: 451 VVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS 510
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+DVV W +I GY +G AL+++ E + P+ + VLS+C+ G +Q G
Sbjct: 511 WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQG 568
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 158/289 (54%), Gaps = 4/289 (1%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
++F +NT++ D I Y + GF P+ FTF V KAC + G +H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
+V K GF D++V+ L+ FY CG R+A KVF ++P ++V SWT +I G++ +GL +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EA+D F +M + P+ A V VL + R+G L G+ I + + ++ G L+
Sbjct: 190 EALDTFS---KMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN-LRPDC 305
+MY KC + +A RVF + ++D V W++MI G +EA+ LF MQ + ++PD
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ VLSACA LGA+ G + + +GTA++D+YAKCG
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCG 355
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 10/319 (3%)
Query: 43 VLRSSFHF----GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
V S HF G + + +F + + W +I G + + + + M +
Sbjct: 143 VQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE- 201
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P T+ VL + R+ LG +H L++K + + L+ Y KC L DA
Sbjct: 202 --PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGL-LEMGLRPDSANLVHVLGACARL 217
+VF ++ +K+ SW ++I G +EA+DLF + G++PD L VL ACA L
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASL 319
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
G + GRW+ Y+ +G+ + +GT +V+MYAKCG +E A +F+G+ ++V W+A++
Sbjct: 320 GAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALL 379
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
G A +G E+L+ F EM K +P+ + L+AC G + G R M + E+
Sbjct: 380 GGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYN 439
Query: 338 SNPVLG--TALIDLYAKCG 354
P L +IDL + G
Sbjct: 440 LFPKLEHYGCMIDLLCRAG 458
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 159/289 (55%), Gaps = 6/289 (2%)
Query: 74 MIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG 133
M +G + N L+ ++ FF T F++ + + + LH+L +K G
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTNLLHTLTLKLG 59
Query: 134 FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFR 193
F D F L+ Y K + ARK+FD++ E NV SWT++I GY++ G + A+ +F+
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 194 GLLE-MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC 252
+ E + P+ V AC+ L + G+ I + SGL RN+ V ++LV+MY KC
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 253 GSMEEARRVFDGML--ERDVVCWSAMIQGYASNGLPREALQLF--FEMQKENLRPDCFAM 308
+E ARRVFD M+ R+VV W++MI YA N EA++LF F + R + F +
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
V+SAC+ LG LQ G A GL+ + SN V+ T+L+D+YAKCGS+
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 161/312 (51%), Gaps = 8/312 (2%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
D + V+ ++ S + + LFD+ PN W ++I G D + + ++ M
Sbjct: 62 SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM 121
Query: 95 HQ-QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
H+ + P +TF V KAC+ L +G +H+ + +G ++ V + L+ Y KC
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCND 181
Query: 154 LRDARKVFDDIPE--KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN---LV 208
+ AR+VFD + +NV SWT++I Y+++ EA++LFR L D AN L
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF-NAALTSDRANQFMLA 240
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
V+ AC+ LG L G+ ++ G N V T+L++MYAKCGS+ A ++F +
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
V+ +++MI A +GL A++LF EM + P+ ++GVL AC+ G + G
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 329 GLMDAEEFLSNP 340
LM AE++ P
Sbjct: 361 SLM-AEKYGVVP 371
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 175/353 (49%), Gaps = 38/353 (10%)
Query: 8 LLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVL-RSSFHFGNTHHPKLLFDQTHNP 66
+L+ +S ++V H H +++L L R+ G H LF QT +P
Sbjct: 34 VLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDP 93
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ FL+ I N LY + P FTF+ +LK+C+ G +H
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIH 149
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK------------------- 167
+ V+K G D +V TGL+ Y+K G + A+KVFD +PE+
Sbjct: 150 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 209
Query: 168 ------------NVASWTALICGYSESGLCEEAVDLFRGLLEMGL-RPDSANLVHVLGAC 214
++ SW +I GY++ G +A+ LF+ LL G +PD +V L AC
Sbjct: 210 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+++G L +GRWI ++ S + NV V T L++MY+KCGS+EEA VF+ +D+V W+
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 275 AMIQGYASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQLGNR 326
AMI GYA +G ++AL+LF EMQ L+P +G L ACA G + G R
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 36/241 (14%)
Query: 148 YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
Y+ G +R + +F + ++ +TA I S +GL ++A L+ LL + P+
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 208 VHVLGAC-------------------------------ARLGDLGSGRWIDRYMSESGLH 236
+L +C A+ GD+ S + + M E
Sbjct: 134 SSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE---- 189
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
R++ T ++ YAK G++E AR +FD M ERD+V W+ MI GYA +G P +AL LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 297 QKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
E +PD +V LSAC+++GAL+ G + + N + T LID+Y+KCGS
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309
Query: 356 M 356
+
Sbjct: 310 L 310
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 180/380 (47%), Gaps = 39/380 (10%)
Query: 13 LKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWN 72
+KS +Q K H H S+V+ + H LLF +P W
Sbjct: 18 IKSKSQAKQLHAQFIRTQSLSHTS---ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWK 74
Query: 73 TMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKT 132
++IR D F + + M G P+ F VLK+C + G ++H +V+
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 133 GFVGDVFVETGLLGFYSK---------CGHLRD--------------------------- 156
G D++ L+ Y+K G++ D
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
R+VF+ +P K+V S+ +I GY++SG+ E+A+ + R + L+PDS L VL +
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
D+ G+ I Y+ G+ +V++G++LV+MYAK +E++ RVF + RD + W+++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
+ GY NG EAL+LF +M ++P A V+ ACA L L LG + G + F
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 337 LSNPVLGTALIDLYAKCGSM 356
SN + +AL+D+Y+KCG++
Sbjct: 375 GSNIFIASALVDMYSKCGNI 394
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 148/263 (56%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +F+ + +NT+I G + + D +++ M P+SFT + VL +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H V++ G DV++ + L+ Y+K + D+ +VF + ++ SW +L+
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY ++G EA+ LFR ++ ++P + V+ ACA L L G+ + Y+ G
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N+F+ + LV+MY+KCG+++ AR++FD M D V W+A+I G+A +G EA+ LF EM
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 297 QKENLRPDCFAMVGVLSACARLG 319
+++ ++P+ A V VL+AC+ +G
Sbjct: 436 KRQGVKPNQVAFVAVLTACSHVG 458
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + + + WN+++ G V N +++ ++L+ M P + F+ V+ ACA L
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
HLG LH V++ GF ++F+ + L+ YSKCG+++ ARK+FD + + SWTA+I G
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG--DLGSGRWIDRYMSESGLH 236
++ G EAV LF + G++P+ V VL AC+ +G D G + + GL+
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG-YFNSMTKVYGLN 477
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---------------- 279
+ + + ++ + G +EEA M +E WS ++
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 280 ------------------YASNGLPREALQLFFEMQKENLR--PDC 305
YASNG +E +L M+K+ LR P C
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPAC 583
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 157/303 (51%), Gaps = 8/303 (2%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
+LF++ ++ +NT+I G + + + I L+ M Q G P FTF+ VLKA L
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
F LG LH+L V TGF D V +L FYSK + + R +FD++PE + S+ +I
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID----RYMSES 233
YS++ E ++ FR + MG + +L A L L GR + ++S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
LH VG +LV+MYAKC EEA +F + +R V W+A+I GY GL L+LF
Sbjct: 385 ILH----VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLF 440
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+M+ NLR D VL A A +L LG + + L N G+ L+D+YAKC
Sbjct: 441 TKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC 500
Query: 354 GSM 356
GS+
Sbjct: 501 GSI 503
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 138/269 (51%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
++LFD+ + +N +I D + + + M GF +F F +L A L
Sbjct: 305 RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+G LH + + V L+ Y+KC +A +F +P++ SWTALI
Sbjct: 365 SSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY + GL + LF + LR D + VL A A L G+ + ++ SG
Sbjct: 425 SGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL 484
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
NVF G+ LV+MYAKCGS+++A +VF+ M +R+ V W+A+I +A NG A+ F +M
Sbjct: 485 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGN 325
+ L+PD +++GVL+AC+ G ++ G
Sbjct: 545 IESGLQPDSVSILGVLTACSHCGFVEQGT 573
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 33/298 (11%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+L+F T W +I G V G++L+ M + TF VLKA A
Sbjct: 406 ELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASF 465
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG LH+ ++++G + +VF +GL+ Y+KCG ++DA +VF+++P++N SW ALI
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
++++G E A+ F ++E GL+PDS +++ VL AC+ G + G + MS
Sbjct: 526 SAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP---- 581
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
G T + C M+ NG EA +L EM
Sbjct: 582 ---IYGITPKKKHYAC-----------------------MLDLLGRNGRFAEAEKLMDEM 615
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
E PD VL+AC L RA + + E L + ++ ++YA G
Sbjct: 616 PFE---PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H++ + ++ G+ + LFD + W ++ N F + +L+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 94 MHQQG--FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVF--VETGLLGFYS 149
M + P+ TFT +L C + +H+ VK GF + F V LL Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
+ L A +F++IPEK+ ++ LI GY + GL E++ LF + + G +P
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
VL A L D G+ + +G R+ VG +++ Y+K + E R +FD M E D
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR--- 326
V ++ +I Y+ +L F EMQ F +LS A L +LQ+G +
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKC 353
L A+ L +G +L+D+YAKC
Sbjct: 376 QALLATADSILH---VGNSLVDMYAKC 399
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 159/322 (49%), Gaps = 31/322 (9%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P + ++N +R + + I Y + G + F+F +LKA +++ G L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H + K + D FVETG + Y+ CG + AR VFD++ ++V +W +I Y GL
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH--------- 236
+EA LF + + + PD L +++ AC R G++ R I ++ E+ +
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 237 ----------------------RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
RN+FV T +V+ Y+KCG +++A+ +FD ++D+VCW+
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
MI Y + P+EAL++F EM ++PD +M V+SACA LG L +
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
S + ALI++YAKCG +
Sbjct: 374 GLESELSINNALINMYAKCGGL 395
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 163/340 (47%), Gaps = 44/340 (12%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIR-----GMVDNDCFHDGIQLYHSMHQQGFFPESFT 105
G ++ + +FD+ + + WNTMI G+VD + +L+ M P+
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD-----EAFKLFEEMKDSNVMPDEMI 214
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGF------------------------------- 134
++ AC R + ++ +++
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 135 VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRG 194
V ++FV T ++ YSKCG L DA+ +FD +K++ WT +I Y ES +EA+ +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS 254
+ G++PD ++ V+ ACA LG L +W+ + +GL + + L+NMYAKCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
++ R VF+ M R+VV WS+MI + +G +AL LF M++EN+ P+ VGVL
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAK 352
C+ G ++ G + M +E+ P L ++DL+ +
Sbjct: 455 CSHSGLVEEGKKIFASM-TDEYNITPKLEHYGCMVDLFGR 493
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 3/246 (1%)
Query: 37 NYLVSLVLRSSF-HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
N VS + S + G +++FDQT + W TMI V++D + ++++ M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P+ + V+ ACA L +HS + G ++ + L+ Y+KCG L
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
R VF+ +P +NV SW+++I S G +A+ LF + + + P+ V VL C+
Sbjct: 397 ATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 216 RLGDLGSGRWIDRYMS-ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
G + G+ I M+ E + + +V+++ + + EA V + M + +VV W
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 274 SAMIQG 279
+++
Sbjct: 517 GSLMSA 522
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 157 ARKVFDDIPEKNVA-SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A VF IP + + + S S + ++ + +G R D + + +L A +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
++ L G + + + FV T ++MYA CG + AR VFD M RDVV W+
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI+ Y GL EA +LF EM+ N+ PD + ++SAC R G ++ + +
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
+ L TAL+ +YA G M
Sbjct: 243 VRMDTHLLTALVTMYAGAGCM 263
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 174/331 (52%), Gaps = 14/331 (4%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D+Y+ ++ G + +FD+ N+ LW +++G + + +L+ M
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDV-FVETGLLGFYSKCGH 153
G ++ T ++KAC + +G +H + ++ F+ +++ ++ Y KC
Sbjct: 202 RDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRL 261
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L +ARK+F+ ++NV WT LI G+++ EA DLFR +L + P+ L +L +
Sbjct: 262 LDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVS 321
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C+ LG L G+ + YM +G+ + T+ ++MYA+CG+++ AR VFD M ER+V+ W
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG-------NR 326
S+MI + NGL EAL F +M+ +N+ P+ V +LSAC+ G ++ G R
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
G++ EE + ++DL + G +G
Sbjct: 442 DYGVVPEEEHYA------CMVDLLGRAGEIG 466
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 156/297 (52%), Gaps = 11/297 (3%)
Query: 67 NTFLWNTMIRGMVDND--CFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
N WNT++ G + C+ D + LY+ M + +SF F +KAC L G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H L +K G D +V L+ Y++ G + A+KVFD+IP +N W L+ GY +
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGAC-----ARLGDLGSGRWIDRYMSESGLHRNV 239
E LF + + GL D+ L+ ++ AC ++G G I R S + ++
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR----SFIDQSD 246
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
++ ++++MY KC ++ AR++F+ ++R+VV W+ +I G+A EA LF +M +E
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE 306
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++ P+ + +L +C+ LG+L+ G G M + V T+ ID+YA+CG++
Sbjct: 307 SILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI 363
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 7/240 (2%)
Query: 121 LGHT--LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP--EKNVASWTALI 176
L HT +H+ V+ GF +V + + L Y + L A F+ IP ++N SW ++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 177 CGYSESGLC--EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
GYS+S C + + L+ + DS NLV + AC LG L +G I ++G
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNG 139
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
L ++ +V +LV MYA+ G+ME A++VFD + R+ V W +++GY E +LF
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL-SNPVLGTALIDLYAKC 353
M+ L D ++ ++ AC + A ++G G+ F+ + L ++ID+Y KC
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H D Y+ + +L G + +F + +WN M+ +ND + + L+
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M Q+ P+SFT + V+ C+ L ++ G ++H+ + K +E+ LL YSKCG
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM--GLRPDSANLVHVL 211
DA VF + EK++ +W +LI G ++G +EA+ +F + + L+PDS + V
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
ACA L L G + M ++GL NVFVG++L+++Y+KCG E A +VF M ++V
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W++MI Y+ N LP ++ LF M + + PD ++ VL A + +L G G
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 332 DAEEFLSNPVLGTALIDLYAKCG 354
S+ L ALID+Y KCG
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCG 626
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 3/322 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHN-PNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
D++L + ++ F FG + +F + + N LWN MI G + + LY
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
S +FT L AC++ + G +H VVK G D +V T LL YSKCG +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
+A VF + +K + W A++ Y+E+ A+DLF + + + PDS L +V+ C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+ LG G+ + + + + + + L+ +Y+KCG +A VF M E+D+V W
Sbjct: 384 SVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWG 443
Query: 275 AMIQGYASNGLPREALQLFFEMQKEN--LRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
++I G NG +EAL++F +M+ ++ L+PD M V +ACA L AL+ G + G M
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503
Query: 333 AEEFLSNPVLGTALIDLYAKCG 354
+ N +G++LIDLY+KCG
Sbjct: 504 KTGLVLNVFVGSSLIDLYSKCG 525
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 154/288 (53%), Gaps = 3/288 (1%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL--GHTLHS 127
+WN+MI G F +G+ + M G P++F+ + V+ + +F G +H
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHG 194
Query: 128 LVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NVASWTALICGYSESGLCE 186
+++ D F++T L+ Y K G DA +VF +I +K NV W +I G+ SG+CE
Sbjct: 195 FMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICE 254
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
++DL+ ++ S + LGAC++ + G GR I + + GLH + +V T+L+
Sbjct: 255 SSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLL 314
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
+MY+KCG + EA VF ++++ + W+AM+ YA N AL LF M+++++ PD F
Sbjct: 315 SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSF 374
Query: 307 AMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ V+S C+ LG G + S + +AL+ LY+KCG
Sbjct: 375 TLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 138/270 (51%), Gaps = 2/270 (0%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ--GFFPESFTFTFVLKACAR 115
L+F + W ++I G+ N F + ++++ M P+S T V ACA
Sbjct: 429 LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
L G +H ++KTG V +VFV + L+ YSKCG A KVF + +N+ +W ++
Sbjct: 489 LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSM 548
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
I YS + L E ++DLF +L G+ PDS ++ VL A + L G+ + Y G+
Sbjct: 549 ISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 608
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ + L++MY KCG + A +F M + ++ W+ MI GY S+G AL LF E
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE 668
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGN 325
M+K PD + ++SAC G ++ G
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 152/298 (51%), Gaps = 13/298 (4%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMH--QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLV 129
N+ IR ++ + + LY S H F+ FTF +LKAC+ L + G T+H V
Sbjct: 28 NSGIRALIQKGEYLQALHLY-SKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSV 86
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD-------DIPEKNVASWTALICGYSES 182
V G+ D F+ T L+ Y KCG L A +VFD + ++V W ++I GY +
Sbjct: 87 VVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKF 146
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL--GSGRWIDRYMSESGLHRNVF 240
+E V FR +L G+RPD+ +L V+ + G+ G+ I +M + L + F
Sbjct: 147 RRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSF 206
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
+ T L++MY K G +A RVF + ++ +VV W+ MI G+ +G+ +L L+ +
Sbjct: 207 LKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN 266
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+++ + G L AC++ G + + ++P + T+L+ +Y+KCG +G
Sbjct: 267 SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG 324
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F N WN+MI N+ I L++ M QG FP+S + T VL A +
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +LH ++ G D ++ L+ Y KCG + A +F + K++ +W +I G
Sbjct: 593 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHR 237
Y G C A+ LF + + G PD + ++ AC G + G+ I +M + G+
Sbjct: 653 YGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP 712
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
N+ +V++ + G +EEA M +E D W
Sbjct: 713 NMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 166/314 (52%), Gaps = 8/314 (2%)
Query: 48 FHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFT 107
FG LF Q N W TMI G+ N+ + + L+ +M + S FT
Sbjct: 170 LQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT 229
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
V+ ACA FH+G +H L++K GF+ + +V L+ FY+ C + D+RKVFD+ +
Sbjct: 230 CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHE 289
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
VA WTAL+ GYS + E+A+ +F G+L + P+ + L +C+ LG L G+ +
Sbjct: 290 QVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+ GL + FVG +LV MY+ G++ +A VF + ++ +V W+++I G A +G +
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR-----AKGLMDAEEFLSNPVL 342
A +F +M + N PD G+LSAC+ G L+ G + + G+ + + +
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY-- 467
Query: 343 GTALIDLYAKCGSM 356
T ++D+ +CG +
Sbjct: 468 -TCMVDILGRCGKL 480
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 10/299 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + WN+MI G V+ + ++L+ M ++ ++T ++ C R
Sbjct: 88 LFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGK 143
Query: 119 FHLGHTL-HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
L + + VK D ++ Y + G + DA K+F +P KNV SWT +IC
Sbjct: 144 VDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMIC 198
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G ++ EA+DLF+ +L ++ S V+ ACA G + + + G
Sbjct: 199 GLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLY 258
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+V +L+ YA C + ++R+VFD + V W+A++ GY+ N +AL +F M
Sbjct: 259 EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ ++ P+ L++C+ LG L G G+ ++ +G +L+ +Y+ G++
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNV 377
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 138 VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE 197
V + T ++ Y++ L DA +FD++P ++V SW ++I G E G AV LF + E
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 198 MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEE 257
+ +A ++ C R G + + M ++ ++V+ Y + G +++
Sbjct: 126 RSVVSWTA----MVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDD 177
Query: 258 ARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
A ++F M ++V+ W+ MI G N EAL LF M + ++ V++ACA
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
A +G + GL+ FL + +LI YA C +G
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 162/307 (52%), Gaps = 13/307 (4%)
Query: 59 LFDQTHNP--NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+FD+ +P N W+ MIR ND + LY+ M G P +T+ FVLKACA L
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +HS V + F D++V T L+ FY+KCG L A KVFD++P++++ +W A+I
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 177 CGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
G+S + + LF + + GL P+ + +V + A R G L G+ + Y + G
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
++ V T ++++YAK + ARRVFD +++ V WSAMI GY N + +EA ++FF+
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 296 MQKENLRPDCFAMVG------VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
M L D AMV +L CAR G L G F+ + + +I
Sbjct: 297 M----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISF 352
Query: 350 YAKCGSM 356
YAK GS+
Sbjct: 353 YAKYGSL 359
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 4/304 (1%)
Query: 55 HPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM--HQQGFFPESFTFTFVLKA 112
+ + +FD N W+ MI G V+N+ + +++ M + +L
Sbjct: 258 YARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMG 317
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASW 172
CAR G +H VK GF+ D+ V+ ++ FY+K G L DA + F +I K+V S+
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE 232
+LI G + EE+ LF + G+RPD L+ VL AC+ L LG G Y
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV 437
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
G N + L++MY KCG ++ A+RVFD M +RD+V W+ M+ G+ +GL +EAL L
Sbjct: 438 HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 293 FFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLY 350
F MQ+ + PD ++ +LSAC+ G + G + M +F P + + DL
Sbjct: 498 FNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 351 AKCG 354
A+ G
Sbjct: 558 ARAG 561
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 159/303 (52%), Gaps = 7/303 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACARLC 117
+FD+ + WN MI G + C D I L+ M + G P T + A R
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
G +H + GF D+ V+TG+L Y+K + AR+VFD +KN +W+A+I
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 178 GYSESGLCEEAVDLFRGLLEMG----LRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
GY E+ + +EA ++F +L + P + L+ L CAR GDL GR + Y ++
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKA 337
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
G ++ V T+++ YAK GS+ +A R F + +DV+ ++++I G N P E+ +LF
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
EM+ +RPD ++GVL+AC+ L AL G+ G + N + AL+D+Y KC
Sbjct: 398 HEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKC 457
Query: 354 GSM 356
G +
Sbjct: 458 GKL 460
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 136/251 (54%), Gaps = 4/251 (1%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
F +L+ C R + LG +H ++K + V L Y+ C + AR VFD+I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 165 PEK--NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
P N +W +I Y+ + E+A+DL+ +L G+RP VL ACA L +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G+ I +++ S +++V T LV+ YAKCG +E A +VFD M +RD+V W+AMI G++
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 283 NGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
+ + + LF +M++ + L P+ +VG+ A R GAL+ G G F ++ V
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 342 LGTALIDLYAK 352
+ T ++D+YAK
Sbjct: 242 VKTGILDVYAK 252
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 167/322 (51%), Gaps = 37/322 (11%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
QD ++V ++R + + +F NPN +L+ MI G V + DG+ LYH M
Sbjct: 59 QDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRM 118
Query: 95 HQQGFFPESFTFTFVLKACA-RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
P+++ T VLKAC ++C +H+ V+K GF V ++ Y K G
Sbjct: 119 IHNSVLPDNYVITSVLKACDLKVCR-----EIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFR---------------GLL-- 196
L +A+K+FD++P+++ + T +I YSE G +EA++LF+ GL+
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 197 -----------EMGLRPDSAN---LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
EM + SAN V VL AC+ LG L GRW+ ++ + + FVG
Sbjct: 234 KEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG 293
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
L+NMY++CG + EARRVF M ++DV+ ++ MI G A +G EA+ F +M R
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 303 PDCFAMVGVLSACARLGALQLG 324
P+ +V +L+AC+ G L +G
Sbjct: 354 PNQVTLVALLNACSHGGLLDIG 375
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 30/280 (10%)
Query: 105 TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
T VL++C + H ++H+ +++T D FV L+ S + A VF +
Sbjct: 31 TLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC---------A 215
NV +TA+I G+ SG + V L+ ++ + PD+ + VL AC A
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 216 RLGDLG-----------------SGRWID-RYMSESGLHRNVFVGTTLVNMYAKCGSMEE 257
++ LG SG ++ + M + R+ T ++N Y++CG ++E
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 258 ARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
A +F + +D VCW+AMI G N +AL+LF EMQ EN+ + F V VLSAC+
Sbjct: 208 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 267
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
LGAL+LG ++ + + +G ALI++Y++CG +
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDIN 307
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 132/300 (44%), Gaps = 42/300 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF +T W MI G+V N + ++L+ M + FT VL AC+ L
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA 270
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG +HS V FV L+ YS+CG + +AR+VF + +K+V S+ +I G
Sbjct: 271 LELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISG 330
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHR 237
+ G EA++ FR ++ G RP+ LV +L AC+ G L G + M +
Sbjct: 331 LAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEP 390
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ +V++ + G +EEA R + +P E
Sbjct: 391 QIEHYGCIVDLLGRVGRLEEAYRFIE--------------------NIPIE--------- 421
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNR-AKGLMDAEEFLSNPVLGTALI--DLYAKCG 354
PD + +LSAC G ++LG + AK L ++E NP GT ++ +LYA G
Sbjct: 422 -----PDHIMLGTLLSACKIHGNMELGEKIAKRLFESE----NPDSGTYVLLSNLYASSG 472
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 161/298 (54%), Gaps = 6/298 (2%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
QD +L + ++ G+ + + +FD+T ++WN + R + + + LY M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 95 HQQGFFPESFTFTFVLKAC-ARLC---HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
++ G + FT+T+VLKAC A C H G +H+ + + G+ V++ T L+ Y++
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 151 CGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE--MGLRPDSANLV 208
G + A VF +P +NV SW+A+I Y+++G EA+ FR ++ P+S +V
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMV 289
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
VL ACA L L G+ I Y+ GL + V + LV MY +CG +E +RVFD M +R
Sbjct: 290 SVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR 349
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
DVV W+++I Y +G ++A+Q+F EM P V VL AC+ G ++ G R
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
N +I+ + I++ Q P T+ ++ C +H ++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVL----SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
G D F+ T L+G YS G + ARKVFD ++ + W AL + +G EE + L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 192 FRGLLEMGLRPDSANLVHVLGACA----RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVN 247
+ + +G+ D +VL AC + L G+ I +++ G +V++ TTLV+
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 248 MYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE--NLRPDC 305
MYA+ G ++ A VF GM R+VV WSAMI YA NG EAL+ F EM +E + P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
MV VL ACA L AL+ G G + S + +AL+ +Y +CG +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 36/333 (10%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG--FFPESFTFTFVLKACARL 116
+ D++ P F N+MIR + Y + G P+++T F+++AC L
Sbjct: 62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGL 121
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS--------------------------- 149
G +H + ++ GF D V+TGL+ Y+
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 150 ----KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
+CG + ARK+F+ +PE++ +W A+I GY++ G EA+++F + G++ +
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
++ VL AC +LG L GRW Y+ + + V + TTLV++YAKCG ME+A VF GM
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 266 LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
E++V WS+ + G A NG + L+LF M+++ + P+ V VL C+ +G + G
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 326 RAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
R M EF P L L+DLYA+ G +
Sbjct: 362 RHFDSM-RNEFGIEPQLEHYGCLVDLYARAGRL 393
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + LF+ + WN MI G + + ++H M +G VL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC +L G HS + + V + T L+ Y+KCG + A +VF + EKNV
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRY 229
+W++ + G + +G E+ ++LF + + G+ P++ V VL C+ +G + G R D
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+E G+ + LV++YA+ G +E+A + M ++ WS+++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 169/322 (52%), Gaps = 10/322 (3%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L++L L+ GN ++LFD+T + WN+MI G N + + +++SM
Sbjct: 233 NSLINLYLKC----GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+F V+K CA L LH VVK GF+ D + T L+ YSKC + D
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 157 ARKVFDDIP-EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A ++F +I NV SWTA+I G+ ++ EEAVDLF + G+RP+ +L A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+ S + + ++ R+ VGT L++ Y K G +EEA +VF G+ ++D+V WSA
Sbjct: 409 VI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA-LQLGNRAKGLMDAE 334
M+ GYA G A+++F E+ K ++P+ F +L+ CA A + G + G
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
S+ + +AL+ +YAK G++
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNI 546
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 3/311 (0%)
Query: 46 SSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFT 105
SS N H+ LFD++ + + +++ G + + +L+ ++H+ G +
Sbjct: 39 SSSRLYNAHN---LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
F+ VLK A LC G LH +K GF+ DV V T L+ Y K + +D RKVFD++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
E+NV +WT LI GY+ + + +E + LF + G +P+S LG A G G G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
+ + ++GL + + V +L+N+Y KCG++ +AR +FD + VV W++MI GYA+NGL
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
EAL +F+ M+ +R + V+ CA L L+ + + FL + + TA
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 346 LIDLYAKCGSM 356
L+ Y+KC +M
Sbjct: 336 LMVAYSKCTAM 346
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 156/292 (53%), Gaps = 6/292 (2%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N W MI G + ND + + L+ M ++G P FT++ +L A + +H
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVH 416
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
+ VVKT + V T LL Y K G + +A KVF I +K++ +W+A++ GY+++G E
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARL-GDLGSGRWIDRYMSESGLHRNVFVGTTL 245
A+ +F L + G++P+ +L CA +G G+ + +S L ++ V + L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
+ MYAK G++E A VF E+D+V W++MI GYA +G +AL +F EM+K ++ D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAE-EFLSNPVLGTALIDLYAKCGSM 356
+GV +AC G ++ G + +M + + + ++DLY++ G +
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 157/301 (52%), Gaps = 15/301 (4%)
Query: 34 HQDNYLVSLVLRSS-------FHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHD 86
D++++S ++R S F T LL P+T WN + RG +D +
Sbjct: 42 QNDSFIISELVRVSSLSLAKDLAFARTL---LLHSSDSTPST--WNMLSRGYSSSDSPVE 96
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG 146
I +Y M ++G P TF F+LKACA G + V+K GF DV+V L+
Sbjct: 97 SIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIH 156
Query: 147 FYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
Y C DARKVFD++ E+NV SW +++ E+G + F ++ PD
Sbjct: 157 LYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETT 216
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
+V +L AC G+L G+ + + L N +GT LV+MYAK G +E AR VF+ M+
Sbjct: 217 MVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGN 325
+++V WSAMI G A G EALQLF +M KE ++RP+ +GVL AC+ G + G
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 326 R 326
+
Sbjct: 335 K 335
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 7/249 (2%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL--GFYSKCGHLRDARKVFDDIPEK 167
LK C+ + H +H + + D F+ + L+ S L AR + +
Sbjct: 20 LKLCSSIKHLL---QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
++W L GYS S E++ ++ + G++P+ +L ACA L +GR I
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+ + G +V+VG L+++Y C +AR+VFD M ER+VV W++++ NG
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
+ F EM + PD MV +LSAC G L LG + E N LGTAL+
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 348 DLYAKCGSM 356
D+YAK G +
Sbjct: 255 DMYAKSGGL 263
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 2/311 (0%)
Query: 48 FHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTF 106
F G + +FD+ + +W MI G+ N + + L+ +M ++ +P S
Sbjct: 260 FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVIL 319
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKT-GFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
T +L + LG +H+ V+K+ +V FV +GL+ Y KCG + R+VF
Sbjct: 320 TTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSK 379
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
++N SWTAL+ GY+ +G ++A+ + + G RPD + VL CA L + G+
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKE 439
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
I Y ++ NV + T+L+ MY+KCG E R+FD + +R+V W+AMI Y N
Sbjct: 440 IHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCD 499
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
R +++F M RPD M VL+ C+ L AL+LG G + +EF S P +
Sbjct: 500 LRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR 559
Query: 346 LIDLYAKCGSM 356
+I +Y KCG +
Sbjct: 560 IIKMYGKCGDL 570
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 163/308 (52%), Gaps = 4/308 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMV--DNDCFHDGIQLYHSMHQQGFFPESFTFTF 108
G+ + +FD++ + N + WN ++RG V + D + + M + G ++ +
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
V K+ A G H+L +K G VF++T L+ Y KCG + AR+VFD+I E++
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+ W A+I G + + EA+ LFR ++ E + P+S L +L + L G+ +
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 228 RYMSESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
++ +S + FV + L+++Y KCG M RRVF G +R+ + W+A++ GYA+NG
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
+AL+ MQ+E RPD + VL CA L A++ G FL N L T+L
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 347 IDLYAKCG 354
+ +Y+KCG
Sbjct: 460 MVMYSKCG 467
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 4/298 (1%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
H+ N ++ + I+ + + + + Q+G + TF+ +L+AC R G
Sbjct: 72 HSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGK 131
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
+H + G + F+ T L+ Y+ CG ++DA+KVFD+ NV SW AL+ G SG
Sbjct: 132 QVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISG 191
Query: 184 --LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
++ + F + E+G+ + +L +V + A L G ++GL +VF+
Sbjct: 192 KKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFL 251
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM-QKEN 300
T+LV+MY KCG + ARRVFD ++ERD+V W AMI G A N EAL LF M +E
Sbjct: 252 KTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEK 311
Query: 301 LRPDCFAMVGVLSACARLGALQLGNRAKG-LMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ P+ + +L + AL+LG ++ ++ ++ P + + LIDLY KCG M
Sbjct: 312 IYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMA 369
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 147/313 (46%), Gaps = 13/313 (4%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +F + N W ++ G N F ++ M Q+GF P+ T VL
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CA L G +H +K F+ +V + T L+ YSKCG ++FD + ++NV
Sbjct: 426 PVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+WTA+I Y E+ +++FR +L RPDS + VL C+ L L G+ + ++
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+ FV ++ MY KCG + A FD + + + W+A+I+ Y N L R+A+
Sbjct: 546 LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLG----ALQLGN---RAKGLMDAEEFLSNPVLG 343
F +M P+ F VLS C++ G A + N R L +EE S
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYS----- 660
Query: 344 TALIDLYAKCGSM 356
+I+L +CG +
Sbjct: 661 -LVIELLNRCGRV 672
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G +P LFD+ N W MI V+N GI+++ M P+S T VL
Sbjct: 467 GVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
C+ L LG LH ++K F FV ++ Y KCG LR A FD + K
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRY 229
+WTA+I Y + L +A++ F ++ G P++ VL C++ G + R+ +
Sbjct: 587 TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
+ L + + ++ + +CG +EEA+R+
Sbjct: 647 LRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 170/314 (54%), Gaps = 22/314 (7%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQ--LYHSMHQQGFF-------PESFTFTFV 109
+ Q NP+ FL+NT+I +V N H+ Q L S++ Q P FT+ +
Sbjct: 62 ILRQIPNPSVFLYNTLISSIVSN---HNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 110 LKACARLCHFHL-GHTLHSLVVK--TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
KA +H G LH+ V+K D FV+ L+GFY+ CG LR+AR +F+ I E
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
++A+W L+ Y+ S + ++ + M +RP+ +LV ++ +CA LG+ G W
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWA 238
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
Y+ ++ L N FVGT+L+++Y+KCG + AR+VFD M +RDV C++AMI+G A +G
Sbjct: 239 HVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFG 298
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLG----ALQLGNRAKGLMDAEEFLSNPVL 342
+E ++L+ + + L PD V +SAC+ G LQ+ N K + E + +
Sbjct: 299 QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEH--- 355
Query: 343 GTALIDLYAKCGSM 356
L+DL + G +
Sbjct: 356 YGCLVDLLGRSGRL 369
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LF++ P+ WNT++ +++ ++ + P + ++
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K+CA L F G H V+K + FV T L+ YSKCG L ARKVFD++ +++V+
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ A+I G + G +E ++L++ L+ GL PDSA V + AC+ G + G I M
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
Query: 231 SES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
G+ V LV++ + G +EEA M ++ + W + + ++G
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 8/171 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + +N MIRG+ + +GI+LY S+ QG P+S TF + AC+
Sbjct: 273 VFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
Query: 119 FHLG-HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NVASWTALI 176
G +S+ G V L+ + G L +A + +P K N W + +
Sbjct: 333 VDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
G E + LL + +S N V + A G RW D
Sbjct: 393 GSSQTHGDFERGEIALKHLLGLEFE-NSGNYVLLSNIYA-----GVNRWTD 437
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 169/326 (51%), Gaps = 2/326 (0%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+D V+ ++ S G+ +L+F+ P++F++ +I+ V I LYH
Sbjct: 31 RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR 90
Query: 94 MHQQGFFPESFTFTFVLKACA-RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
+ + F F VL+ACA H +G +H ++K G D +ET LL Y + G
Sbjct: 91 LVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+L DA KVFD +P +++ +W+ L+ E+G +A+ +F+ +++ G+ PD+ ++ V+
Sbjct: 151 NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVE 210
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
CA LG L R + ++ + + +L+ MY+KCG + + R+F+ + +++ V
Sbjct: 211 GCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+AMI Y +AL+ F EM K + P+ + VLS+C +G ++ G G
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 333 AEEFLSN-PVLGTALIDLYAKCGSMG 357
E N L AL++LYA+CG +
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLS 356
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 159/307 (51%), Gaps = 2/307 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN + +FD + W+T++ ++N ++++ M G P++ T V+
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ CA L + ++H + + F D + LL YSKCG L + ++F+ I +KN
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SWTA+I Y+ E+A+ F +++ G+ P+ L VL +C +G + G+ + +
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 231 SESGLHRNV-FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
L N + LV +YA+CG + + V + +R++V W+++I YA G+ +A
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L LF +M + ++PD F + +SAC G + LG + G + + +S+ + +LID+
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDM 448
Query: 350 YAKCGSM 356
Y+K GS+
Sbjct: 449 YSKSGSV 455
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 149/295 (50%), Gaps = 12/295 (4%)
Query: 67 NTFLWNTMI-----RGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL 121
N WN++I RGMV + L+ M Q P++FT + AC L
Sbjct: 369 NIVAWNSLISLYAHRGMVIQ-----ALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSE 181
G +H V++T V D FV+ L+ YSK G + A VF+ I ++V +W +++CG+S+
Sbjct: 424 GKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+G EA+ LF + L + + V+ AC+ +G L G+W+ + SGL +++F
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFT 541
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
T L++MYAKCG + A VF M R +V WS+MI Y +G A+ F +M +
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+P+ + VLSAC G+++ G LM + N IDL ++ G +
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDL 656
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+ + +S G+ +F+Q + + WN+M+ G N + I L+ M+
Sbjct: 443 NSLIDMYSKS----GSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
TF V++AC+ + G +H ++ +G + D+F +T L+ Y+KCG L
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNA 557
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A VF + +++ SW+++I Y G A+ F ++E G +P+ ++VL AC
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSA 275
G + G++ M G+ N +++ ++ G ++EA R M D W +
Sbjct: 618 SGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 276 MIQG 279
++ G
Sbjct: 678 LVNG 681
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 162/321 (50%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+ ++ S ++++ +G P LFD+ + +WN M+ G I+ + M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
P + TF VL CA LG LH LVV +G + ++ LL YSKCG
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA K+F + + +W +I GY +SGL EE++ F ++ G+ PD+ +L + +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+ +L + I Y+ + ++F+ + L++ Y KC + A+ +F DVV ++A
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI GY NGL ++L++F + K + P+ +V +L L AL+LG G + +
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F + +G A+ID+YAKCG M
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRM 492
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 153/298 (51%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF +T WN MI G V + + + ++ M G P++ TF+ +L + ++ +
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN 355
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+H +++ D+F+ + L+ Y KC + A+ +F +V +TA+I G
Sbjct: 356 LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISG 415
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y +GL +++++FR L+++ + P+ LV +L L L GR + ++ + G
Sbjct: 416 YLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNR 475
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+G +++MYAKCG M A +F+ + +RD+V W++MI A + P A+ +F +M
Sbjct: 476 CNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGV 535
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ DC ++ LSACA L + G G M S+ + LID+YAKCG++
Sbjct: 536 SGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 154/292 (52%), Gaps = 1/292 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D +L S ++ + F + +F Q ++ + ++ MI G + N + D ++++ +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ P T +L L LG LH ++K GF + ++ Y+KCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A ++F+ + ++++ SW ++I ++S A+D+FR + G+ D ++ L ACA
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
L G+ I +M + L +V+ +TL++MYAKCG+++ A VF M E+++V W++
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 276 MIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNR 326
+I ++G +++L LF EM +K +RPD + ++S+C +G + G R
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN++I V N + + Y M G P+ TF ++KAC L +F L V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
G + FV + L+ Y + G + K+FD + +K+ W ++ GY++ G + +
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
F + + P++ VL CA + G + + SG+ + +L++MY+
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KCG ++A ++F M D V W+ MI GY +GL E+L F+EM + PD
Sbjct: 286 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 345
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+L + ++ L+ + + + L +ALID Y KC
Sbjct: 346 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD--D 163
+ +L+AC+ G +H+ ++ GD + + +LG Y+ CG D K+F D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
+ ++ W ++I + +GL +A+ + +L G+ PD + ++ AC L +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
++ +S G+ N FV ++L+ Y + G ++ ++FD +L++D V W+ M+ GYA
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
G ++ F M+ + + P+ VLS CA + LG + GL+ +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 344 TALIDLYAKCG 354
+L+ +Y+KCG
Sbjct: 278 NSLLSMYSKCG 288
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 146/251 (58%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
+ +L AC G +H+ ++KT ++ ++ T LL FY KC L DARKV D++P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
EKNV SWTA+I YS++G EA+ +F ++ +P+ VL +C R LG G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
I + + ++FVG++L++MYAK G ++EAR +F+ + ERDVV +A+I GYA GL
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
EAL++F + E + P+ +L+A + L L G +A + E VL +
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 346 LIDLYAKCGSM 356
LID+Y+KCG++
Sbjct: 295 LIDMYSKCGNL 305
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 145/261 (55%), Gaps = 1/261 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ + D+ N W MI + + ++ M + P FTF VL +C R
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG +H L+VK + +FV + LL Y+K G +++AR++F+ +PE++V S TA+I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY++ GL EEA+++F L G+ P+ +L A + L L G+ ++ L
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+ +L++MY+KCG++ ARR+FD M ER + W+AM+ GY+ +GL RE L+LF M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 297 QKEN-LRPDCFAMVGVLSACA 316
+ E ++PD ++ VLS C+
Sbjct: 347 RDEKRVKPDAVTLLAVLSGCS 367
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD N W+ ++ G V N + L+ M +QG +P FTF+ LKAC L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H +K GF V V L+ YSKCG + +A KVF I ++++ SW A+I G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 179 YSESGLCEEAVDLFRGLLEMGL--RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
+ +G +A+D F + E + RPD L +L AC+ G + +G+ I ++ SG H
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 237 --RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
+ + +LV++Y KCG + AR+ FD + E+ ++ WS++I GYA G EA+ LF
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL-MDAEEFLSNPVLGTALIDLYAKC 353
+Q+ N + D FA+ ++ A L+ G + + L + L VL +++D+Y KC
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKC 361
Query: 354 G 354
G
Sbjct: 362 G 362
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 150/282 (53%), Gaps = 8/282 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF--FPESFTFTF 108
G + + +F + + + WN MI G V + + M + P+ FT T
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGF--VGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
+LKAC+ + G +H +V++GF + L+ Y KCG+L ARK FD I E
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
K + SW++LI GY++ G EA+ LF+ L E+ + DS L ++G A L G+ +
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 227 DRYMSE--SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
+ SGL +V ++V+MY KCG ++EA + F M +DV+ W+ +I GY +G
Sbjct: 336 QALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 393
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
L ++++++F+EM + N+ PD + VLSAC+ G ++ G
Sbjct: 394 LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 132/250 (52%), Gaps = 4/250 (1%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+L+ C R G +H ++K+G ++ L+ Y KC A KVFD +PE+N
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V SW+AL+ G+ +G + ++ LF + G+ P+ L AC L L G I
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ + G V VG +LV+MY+KCG + EA +VF +++R ++ W+AMI G+ G +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 289 ALQLFFEMQKENL--RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF--LSNPVLGT 344
AL F MQ+ N+ RPD F + +L AC+ G + G + G + F S+ +
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 345 ALIDLYAKCG 354
+L+DLY KCG
Sbjct: 252 SLVDLYVKCG 261
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 81/151 (53%)
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
NLV +L C R G G + Y+ +SG N+ L++MY KC A +VFD M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 266 LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
ER+VV WSA++ G+ NG + +L LF EM ++ + P+ F L AC L AL+ G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 326 RAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ G F +G +L+D+Y+KCG +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 158
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 137/302 (45%), Gaps = 17/302 (5%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
LV L ++ + F + FDQ W+++I G F + + L+ + +
Sbjct: 253 LVDLYVKCGYLFS----ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
+SF + ++ A G + +L VK + V ++ Y KCG + +A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
K F ++ K+V SWT +I GY + GL +++V +F +L + PD + VL AC+ G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 219 DLGSGRWI-DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAM 276
+ G + + + G+ V +V++ + G ++EA+ + D M ++ +V W +
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 277 IQGYASNG---LPREALQLFFEMQKENLRPDCFAMVGVLSACA-----RLGALQLGNRAK 328
+ +G L +E ++ + +N P + M+ L A + A +LGN K
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKN--PANYVMMSNLYGQAGYWNEQGNARELGN-IK 545
Query: 329 GL 330
GL
Sbjct: 546 GL 547
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 170/320 (53%), Gaps = 1/320 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D L+++++ + G + +FD + WNTMI N + + ++ M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+GF FT + VL AC C LH L VKT +++V T LL Y+KCG ++
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA +VF+ + +K+ +W++++ GY ++ EEA+ L+R M L + L V+ AC+
Sbjct: 215 DAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACS 274
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
L L G+ + + +SG NVFV ++ V+MYAKCGS+ E+ +F + E+++ W+
Sbjct: 275 NLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNT 334
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
+I G+A + P+E + LF +MQ++ + P+ +LS C G ++ G R LM
Sbjct: 335 IISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTY 394
Query: 336 FLS-NPVLGTALIDLYAKCG 354
LS N V + ++D+ + G
Sbjct: 395 GLSPNVVHYSCMVDILGRAG 414
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 152/301 (50%), Gaps = 13/301 (4%)
Query: 69 FLWNTMIRGMV-----DNDCFHDGIQLYHSMHQQGFFPESFTFTF--------VLKACAR 115
F N +IR V + I + S Q+ P ++ F +L+ CAR
Sbjct: 14 FTVNFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCAR 73
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
H +++ GDV + L+ YSKCG + AR+VFD + E+++ SW +
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
I Y+ + + EA+D+F + G + + VL AC D + + ++ +
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
N++VGT L+++YAKCG +++A +VF+ M ++ V WS+M+ GY N EAL L+
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
Q+ +L + F + V+ AC+ L AL G + ++ F SN + ++ +D+YAKCGS
Sbjct: 254 AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGS 313
Query: 356 M 356
+
Sbjct: 314 L 314
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 166/305 (54%), Gaps = 10/305 (3%)
Query: 55 HPKLLFDQ-THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG-FFPESFTFTFVLKA 112
+ + LFDQ ++FL N+MI+ ++ + D LY + ++ F P++FTFT + K+
Sbjct: 28 YARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS 87
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASW 172
C+ + G LHS + + GF D++V TG++ Y+K G + AR FD++P ++ SW
Sbjct: 88 CSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSW 147
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE 232
TALI GY G + A LF +M D ++ + GD+ S R + M+
Sbjct: 148 TALISGYIRCGELDLASKLFD---QMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMT- 203
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
H+ V TT+++ Y ++ AR++FD M ER++V W+ MI GY N P+E ++L
Sbjct: 204 ---HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRL 260
Query: 293 FFEMQ-KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYA 351
F EMQ +L PD ++ VL A + GAL LG + ++ + TA++D+Y+
Sbjct: 261 FQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYS 320
Query: 352 KCGSM 356
KCG +
Sbjct: 321 KCGEI 325
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 118/220 (53%), Gaps = 2/220 (0%)
Query: 138 VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGL-L 196
V T ++ Y + ARK+FD +PE+N+ SW +I GY ++ +E + LF+ +
Sbjct: 207 VITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA 266
Query: 197 EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
L PD ++ VL A + G L G W ++ L + V V T +++MY+KCG +E
Sbjct: 267 TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIE 326
Query: 257 EARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACA 316
+A+R+FD M E+ V W+AMI GYA NG R AL LF M E +PD M+ V++AC
Sbjct: 327 KAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACN 385
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G ++ G + +M + ++DL + GS+
Sbjct: 386 HGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSL 425
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 2/210 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFFPESFTFTFVLKACAR 115
+ LFD N WNTMI G N +GI+L+ M P+ T VL A +
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISD 286
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
LG H V + V V T +L YSKCG + A+++FD++PEK VASW A+
Sbjct: 287 TGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAM 346
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
I GY+ +G A+DLF ++ + +PD ++ V+ AC G + GR M E GL
Sbjct: 347 IHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGL 405
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ + +V++ + GS++EA + M
Sbjct: 406 NAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 154/293 (52%), Gaps = 2/293 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F+ N WN MIRG N H ++L+ M G+ + FTFT +L CA
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+G HS+++K ++FV L+ Y+KCG L DAR++F+ + +++ +W +I
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y + EA DLF+ + G+ D A L L AC + L G+ + + GL R+
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRD 563
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ G++L++MY+KCG +++AR+VF + E VV +A+I GY+ N L EA+ LF EM
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLT 622
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN-PVLGTALIDLY 350
+ P ++ AC + +L LG + G + F S LG +L+ +Y
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 157/322 (48%), Gaps = 1/322 (0%)
Query: 34 HQDNYLVSL-VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYH 92
H+ ++L + V+ + G +LLF + +P+ WN MI G C I+ +
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
+M + T VL A + + LG +H+ +K G +++V + L+ YSKC
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ A KVF+ + EKN W A+I GY+ +G + ++LF + G D +L
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
CA DL G + + L +N+FVG LV+MYAKCG++E+AR++F+ M +RD V
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+ +I Y + EA LF M + D + L AC + L G + L
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 333 AEEFLSNPVLGTALIDLYAKCG 354
+ G++LID+Y+KCG
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCG 578
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 13/313 (4%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +F++ + + WNT+I V ++ + L+ M+ G + L
Sbjct: 477 GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KAC + + G +H L VK G D+ + L+ YSKCG ++DARKVF +PE +V
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVV 596
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
S ALI GYS++ L EEAV LF+ +L G+ P ++ AC + L G +
Sbjct: 597 SMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 231 SESGL-HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE-RDVVCWSAMIQGYASNGLPRE 288
++ G ++G +L+ MY M EA +F + + +V W+ M+ G++ NG E
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEE 715
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM-----DAEEFLSNPVLG 343
AL+ + EM+ + + PD V VL C+ L +L+ G L+ D +E SN
Sbjct: 716 ALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN---- 771
Query: 344 TALIDLYAKCGSM 356
LID+YAKCG M
Sbjct: 772 -TLIDMYAKCGDM 783
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 5/287 (1%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
N +I G N+ + + L+ M +G P TF +++AC + LG H + K
Sbjct: 599 NALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 132 TGFVGD-VFVETGLLGFYSKCGHLRDARKVFDDIPE-KNVASWTALICGYSESGLCEEAV 189
GF + ++ LLG Y + +A +F ++ K++ WT ++ G+S++G EEA+
Sbjct: 658 RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEAL 717
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
++ + G+ PD A V VL C+ L L GR I + + TL++MY
Sbjct: 718 KFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMY 777
Query: 250 AKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
AKCG M+ + +VFD M R +VV W+++I GYA NG +AL++F M++ ++ PD
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITF 837
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCG 354
+GVL+AC+ G + G + +M + + V A ++DL + G
Sbjct: 838 LGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 145/300 (48%), Gaps = 35/300 (11%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +F+ +PNT W + G V + + ++ M +G P+ F V+ RL
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL 274
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G L+DAR +F ++ +V +W +I
Sbjct: 275 -----------------------------------GKLKDARLLFGEMSSPDVVAWNVMI 299
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
G+ + G A++ F + + ++ + L VL A + +L G + + GL
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N++VG++LV+MY+KC ME A +VF+ + E++ V W+AMI+GYA NG + ++LF +M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ D F +LS CA L++G++ ++ ++ N +G AL+D+YAKCG++
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 35/286 (12%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN+M+ ++ + S+ + FP FTF+ VL CAR + G +H ++
Sbjct: 128 WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
K G + + L+ Y+KC + DAR+VF+ I + N WT L GY ++GL EEAV
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
+F + + G RPD V T++N Y
Sbjct: 248 VFERMRDEGHRPDHLAFV-----------------------------------TVINTYI 272
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
+ G +++AR +F M DVV W+ MI G+ G A++ FF M+K +++ +
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGS 332
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
VLSA + L LG SN +G++L+ +Y+KC M
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 1/224 (0%)
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+G +HS + G + + ++ Y+KC + A K FD + EK+V +W +++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
YS G + + F L E + P+ VL CAR ++ GR I M + GL RN
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ G LV+MYAKC + +ARRVF+ +++ + VCW+ + GY GLP EA+ +F M+
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
E RPD A V V++ RLG L+ G M + + ++ V+
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 4/223 (1%)
Query: 59 LFDQTHNPNTF-LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
LF + +P + LW M+ G N + + ++ Y M G P+ TF VL+ C+ L
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NVASWTALI 176
G +HSL+ D L+ Y+KCG ++ + +VFD++ + NV SW +LI
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI-DRYMSESGL 235
GY+++G E+A+ +F + + + PD + VL AC+ G + GR I + + + G+
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
V +V++ + G ++EA + L+ D WS+++
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
+G +V++YAKC + A + FD LE+DV W++M+ Y+S G P + L+ F + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 301 LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+ P+ F VLS CAR ++ G + M N G AL+D+YAKC
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC 208
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 150/244 (61%), Gaps = 4/244 (1%)
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
+ LG T+HS+V+++GF ++V+ LL Y+ CG + A KVFD +PEK++ +W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
I G++E+G EEA+ L+ + G++PD +V +L ACA++G L G+ + YM + GL
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
RN+ L+++YA+CG +EEA+ +FD M++++ V W+++I G A NG +EA++LF
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 296 MQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAK 352
M+ E L P VG+L AC+ G ++ G M EE+ P + ++DL A+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCMVDLLAR 239
Query: 353 CGSM 356
G +
Sbjct: 240 AGQV 243
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 126/249 (50%), Gaps = 5/249 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + WN++I G +N + + LY M+ +G P+ FT +L ACA++
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG +H ++K G ++ LL Y++CG + +A+ +FD++ +KN SWT+LI G
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 179 YSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESGLH 236
+ +G +EA++LF+ + GL P V +L AC+ G + G + R E +
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE 224
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ +V++ A+ G +++A M ++ +VV W ++ +G L F
Sbjct: 225 PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFAR 282
Query: 296 MQKENLRPD 304
+Q L P+
Sbjct: 283 IQILQLEPN 291
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+ L R+ F + +FD + W MI G+ N+C + I+L+ M+
Sbjct: 226 NPLIDLYSRNGF----VDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV 281
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
G P + F+ VL AC ++ +G LH LV+K GF D +V L+ Y G+L
Sbjct: 282 LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLIS 341
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A +F ++ +++ ++ LI G S+ G E+A++LF+ + GL PDS L ++ AC+
Sbjct: 342 AEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
G L G+ + Y ++ G N + L+N+YAKC +E A F +VV W+ M
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
+ Y R + ++F +MQ E + P+ + +L C RLG L+LG + + F
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 337 LSNPVLGTALIDLYAKCGSM 356
N + + LID+YAK G +
Sbjct: 522 QLNAYVCSVLIDMYAKLGKL 541
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 149/298 (50%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
F +T N LWN M+ D + +++ M + P +T+ +LK C RL
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
LG +HS ++KT F + +V + L+ Y+K G L A + K+V SWT +I GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
++ ++A+ FR +L+ G+R D L + + ACA L L G+ I SG ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
LV +Y++CG +EE+ F+ D + W+A++ G+ +G EAL++F M +E
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ + F + A + ++ G + ++ + S + ALI +YAKCGS+
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 6/324 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ + ++ FH GN + +F + +NT+I G+ ++L+ MH
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P+S T ++ AC+ G LH+ K GF + +E LL Y+KC +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR---PDSANLVHVLG 212
A F + +NV W ++ Y GL ++ + FR +M + P+ +L
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
C RLGDL G I + ++ N +V + L++MYAK G ++ A + +DVV
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 558
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+ MI GY +AL F +M +R D + +SACA L AL+ G +
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 333 AEEFLSNPVLGTALIDLYAKCGSM 356
F S+ AL+ LY++CG +
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKI 642
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 144/299 (48%), Gaps = 1/299 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC-ARLC 117
+FD+ F WN MI+ + + + L+ M + P TF+ VL+AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
F + +H+ ++ G V L+ YS+ G + AR+VFD + K+ +SW A+I
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G S++ EA+ LF + +G+ P VL AC ++ L G + + + G
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ +V LV++Y G++ A +F M +RD V ++ +I G + G +A++LF M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ L PD + ++ AC+ G L G + F SN + AL++LYAKC +
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
W TMI G + + + M +G + T + ACA L G +H+
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+GF D+ + L+ YS+CG + ++ F+ + +W AL+ G+ +SG EEA+
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
+F + G+ ++ + A + ++ G+ + ++++G V L++MYA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KCGS+ +A + F + ++ V W+A+I Y+ +G EAL F +M N+RP+ +VG
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLS-NPVLGTALIDLYAKCG 354
VLSAC+ +G + G M++E LS P ++D+ + G
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAG 843
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 93 SMHQQGFFPESFTFTFVLKACARLC-HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC 151
S+ +G P T ++L+ C + G LHS ++K G + + L FY
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 152 GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
G L A KVFD++PE+ + +W +I + L E LF ++ + P+ VL
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 212 GACARLGDLGSG--RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
AC R G + I + GL + V L+++Y++ G ++ ARRVFDG+ +D
Sbjct: 194 EAC-RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
W AMI G + N EA++LF +M + P +A VLSAC ++ +L++G + G
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSM 356
L+ F S+ + AL+ LY G++
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNL 339
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 6/245 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LV+L R G L F+QT + WN ++ G + + ++++ M++
Sbjct: 630 NALVTLYSRC----GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+G +FTF +KA + + G +H+++ KTG+ + V L+ Y+KCG + D
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A K F ++ KN SW A+I YS+ G EA+D F ++ +RP+ LV VL AC+
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 217 LGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWS 274
+G + G + + SE GL +V+M + G + A+ M ++ D + W
Sbjct: 806 IGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWR 865
Query: 275 AMIQG 279
++
Sbjct: 866 TLLSA 870
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 157 ARKVFDDIPEKNVASWTALICGYSE-SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
R VF + AS+ A+ SE E+ +D + G+RP+ L +L C
Sbjct: 39 TRTVFPTLCGTRRASFAAISVYISEDESFQEKRID---SVENRGIRPNHQTLKWLLEGCL 95
Query: 216 RL-GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+ G L GR + + + GL N + L + Y G + A +VFD M ER + W+
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL------QLGNRA- 327
MI+ AS L E LF M EN+ P+ GVL AC R G++ Q+ R
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARIL 214
Query: 328 -KGLMDAEEFLSNPVLGTALIDLYAKCG 354
+GL D+ V+ LIDLY++ G
Sbjct: 215 YQGLRDS------TVVCNPLIDLYSRNG 236
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 9/324 (2%)
Query: 40 VSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF 99
VS +L + H + L + F WN++I + + + + + SM +
Sbjct: 13 VSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSL 72
Query: 100 FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK 159
+P +F +KAC+ L G H G+ D+FV + L+ YS CG L DARK
Sbjct: 73 YPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARK 132
Query: 160 VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL------EMGLRPDSANLVHVLGA 213
VFD+IP++N+ SWT++I GY +G +AV LF+ LL + + DS LV V+ A
Sbjct: 133 VFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISA 192
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS--MEEARRVFDGMLERDVV 271
C+R+ G I ++ + G R V VG TL++ YAK G + AR++FD ++++D V
Sbjct: 193 CSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV 252
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRP-DCFAMVGVLSACARLGALQLGNRAKGL 330
+++++ YA +G+ EA ++F + K + + + VL A + GAL++G
Sbjct: 253 SYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQ 312
Query: 331 MDAEEFLSNPVLGTALIDLYAKCG 354
+ + ++GT++ID+Y KCG
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCG 336
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 147/278 (52%), Gaps = 9/278 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM------HQQGFFPESF 104
G + +FD+ N W +MIRG N D + L+ + F +S
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 105 TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH--LRDARKVFD 162
V+ AC+R+ L ++HS V+K GF V V LL Y+K G + ARK+FD
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRP-DSANLVHVLGACARLGDLG 221
I +K+ S+ +++ Y++SG+ EA ++FR L++ + ++ L VL A + G L
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
G+ I + GL +V VGT++++MY KCG +E AR+ FD M ++V W+AMI GY
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+G +AL+LF M +RP+ V VL+AC+ G
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
+ + +V SW ++I + SG EA+ F + ++ L P ++ + AC+ L D+ SG
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
+ + G ++FV + L+ MY+ CG +E+AR+VFD + +R++V W++MI+GY N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 284 GLPREALQLFFEM------QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
G +A+ LF ++ + + D +V V+SAC+R+ A L + F
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 338 SNPVLGTALIDLYAKCGSMG 357
+G L+D YAK G G
Sbjct: 216 RGVSVGNTLLDAYAKGGEGG 235
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP-ESFTFTFV 109
G + +FDQ + + +N+++ + ++ +++ + + + T + V
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L A + +G +H V++ G DV V T ++ Y KCG + ARK FD + KNV
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDR 228
SWTA+I GY G +A++LF +++ G+RP+ V VL AC+ G G RW +
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASNG 284
G+ + +V++ + G +++A + M ++ D + WS+++ + +
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVE 473
Query: 285 LPREALQLFFEMQKEN 300
L ++ FE+ N
Sbjct: 474 LAEISVARLFELDSSN 489
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 163/319 (51%), Gaps = 5/319 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+SL L++ + + LFD+ + F W MI + F + L+ M
Sbjct: 62 NNLLSLYLKTD----GIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
G P FTF+ V+++CA L G +H V+KTGF G+ V + L YSKCG ++
Sbjct: 118 SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE 177
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
A ++F + + SWT +I + EA+ + +++ G+ P+ V +LGA +
Sbjct: 178 ACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSF 237
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
LG L G+ I + G+ NV + T+LV+ Y++ ME+A RV + E+DV W+++
Sbjct: 238 LG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSV 296
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
+ G+ N +EA+ F EM+ L+P+ F +LS C+ + +L G + F
Sbjct: 297 VSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF 356
Query: 337 LSNPVLGTALIDLYAKCGS 355
+ +G AL+D+Y KC +
Sbjct: 357 EDSTDVGNALVDMYMKCSA 375
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF N +T W MI +V + + +Q Y M + G P FTF +L A + L
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-G 239
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G T+HS ++ G +V ++T L+ FYS+ + DA +V + E++V WT+++ G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ + +EAV F + +GL+P++ +L C+ + L G+ I + G +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 239 VFVGTTLVNMYAKCGSME-EARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
VG LV+MY KC + E EA RVF M+ +VV W+ +I G +G ++ L EM
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYA 351
K + P+ + GVL AC++L ++ + V+G +L+D YA
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 136/258 (52%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F +PN W T+I G+VD+ D L M ++ P T + VL+AC++L H
Sbjct: 383 VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRH 442
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+H+ +++ G++ V L+ Y+ + A V + ++ ++T+L+
Sbjct: 443 VRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTR 502
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
++E G E A+ + + G+R D +L + A A LG L +G+ + Y +SG
Sbjct: 503 FNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V +LV+MY+KCGS+E+A++VF+ + DVV W+ ++ G ASNG AL F EM+
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 299 ENLRPDCFAMVGVLSACA 316
+ PD + +LSAC+
Sbjct: 623 KETEPDSVTFLILLSACS 640
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 6/323 (1%)
Query: 40 VSLVLRSSF-----HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+++VL++S F + + + + FLW +++ G V N + + + M
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
G P +FT++ +L C+ + G +HS +K GF V L+ Y KC
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 155 R-DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+A +VF + NV SWT LI G + G ++ L +++ + P+ L VL A
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C++L + I Y+ + + VG +LV+ YA ++ A V M RD + +
Sbjct: 437 CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITY 496
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
++++ + G AL + M + +R D ++ G +SA A LGAL+ G
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 334 EEFLSNPVLGTALIDLYAKCGSM 356
F + +L+D+Y+KCGS+
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSL 579
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 7/252 (2%)
Query: 111 KACARLCHF------HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
K+C R+ F +G +H V+K G + ++ + LL Y K + +ARK+FD++
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
+ V +WT +I +++S A+ LF ++ G P+ V+ +CA L D+ G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
+ + ++G N VG++L ++Y+KCG +EA +F + D + W+ MI
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
REALQ + EM K + P+ F V +L A + LG L+ G + N VL T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 345 ALIDLYAKCGSM 356
+L+D Y++ M
Sbjct: 264 SLVDFYSQFSKM 275
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 4/310 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + + +FDQ P+T WN +I G+ +N + + ++ M GF P++ + +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NV 169
A + G +HS ++K GF+ D+ V LL Y+ C L +F+D +
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW ++ + E + LF+ +L PD + ++L C + L G + Y
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
++GL F+ L++MYAKCGS+ +ARR+FD M RDVV WS +I GYA +G EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALI 347
L LF EM+ + P+ VGVL+AC+ +G ++ G + M E +S P + ++
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS-PTKEHCSCVV 617
Query: 348 DLYAKCGSMG 357
DL A+ G +
Sbjct: 618 DLLARAGRLN 627
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +FD N + ++I G N + I+LY M Q+ P+ F F ++
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KACA LG LH+ V+K + + L+ Y + + DA +VF IP K++
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGL-RPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW+++I G+S+ G EA+ + +L G+ P+ L AC+ L G I
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+S L N G +L +MYA+CG + ARRVFD + D W+ +I G A+NG EA
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ +F +M+ PD ++ +L A + AL G + + FL++ + +L+ +
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 350 YAKCGSM 356
Y C +
Sbjct: 416 YTFCSDL 422
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 145/287 (50%), Gaps = 2/287 (0%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESF-TFTFVLKACARLCHFHLGHTLHSL 128
L N I + ++ + + ++ + + F T+ ++ AC+ G +H
Sbjct: 33 LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 129 VVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEA 188
++ + D + +L Y KCG LRDAR+VFD +PE+N+ S+T++I GYS++G EA
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 189 VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNM 248
+ L+ +L+ L PD ++ ACA D+G G+ + + + ++ L+ M
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 249 YAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL-RPDCFA 307
Y + M +A RVF G+ +D++ WS++I G++ G EAL EM + P+ +
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 308 MVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
L AC+ L G++ GL E N + G +L D+YA+CG
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 11/265 (4%)
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
F P + F LKAC+ L G +H L +K+ G+ L Y++CG L AR
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
+VFD I + ASW +I G + +G +EAV +F + G PD+ +L +L A +
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMI 277
L G I Y+ + G ++ V +L+ MY C + +F+ D V W+ ++
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTIL 445
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-----KGLMD 332
+ P E L+LF M PD M +L C + +L+LG++ K +
Sbjct: 446 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 333 AEEFLSNPVLGTALIDLYAKCGSMG 357
E+F+ N LID+YAKCGS+G
Sbjct: 506 PEQFIKN-----GLIDMYAKCGSLG 525
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 122/229 (53%), Gaps = 2/229 (0%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
L D +N ++ WNT++ + ++ + ++L+ M P+ T +L+ C +
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
LG +H +KTG + F++ GL+ Y+KCG L AR++FD + ++V SW+ LI
Sbjct: 488 SLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM-SESGLH 236
GY++SG EEA+ LF+ + G+ P+ V VL AC+ +G + G + M +E G+
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
+ +V++ A+ G + EA R D M LE DVV W ++ + G
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 84/150 (56%)
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+ ++ AC+ L GR I ++ S + + +++MY KCGS+ +AR VFD M E
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA 327
R++V ++++I GY+ NG EA++L+ +M +E+L PD FA ++ ACA + LG +
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL 190
Query: 328 KGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ E S+ + ALI +Y + M
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 154/290 (53%), Gaps = 1/290 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N +LWN++IR N F + ++ Y + + P+ +TF V+KACA L +G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
++ GF D+FV L+ YS+ G L AR+VFD++P +++ SW +LI GYS G E
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EA++++ L + PDS + VL A L + G+ + + +SG++ V V LV
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
MY K +ARRVFD M RD V ++ MI GY + E++++F E + +PD
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLL 308
Query: 307 AMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ VL AC L L L M F+ + LID+YAKCG M
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 7/304 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD+ + WN++I G + + + +++YH + P+SFT + VL A L
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G LH +K+G V V GL+ Y K DAR+VFD++ ++ S+ +I
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
CGY + + EE+V +F L+ +PD + VL AC L DL ++I YM ++G
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
V L+++YAKCG M AR VF+ M +D V W+++I GY +G EA++LF M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD---AEEFLSNPVLGTALIDLYAKC 353
+ D + ++S RL L+ G KGL + + ALID+YAKC
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFG---KGLHSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 354 GSMG 357
G +G
Sbjct: 457 GEVG 460
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
LV++ L+ F + +FD+ ++ +NTMI G + + + ++++ Q
Sbjct: 248 LVAMYLK----FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
F P+ T + VL+AC L L +++ ++K GFV + V L+ Y+KCG + AR
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
VF+ + K+ SW ++I GY +SG EA+ LF+ ++ M + D + ++ RL
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQ 278
DL G+ + +SG+ ++ V L++MYAKCG + ++ ++F M D V W+ +I
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
G LQ+ +M+K + PD + L CA L A +LG + + S
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 339 NPVLGTALIDLYAKCG 354
+G ALI++Y+KCG
Sbjct: 543 ELQIGNALIEMYSKCG 558
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +F+ +T WN++I G + + + ++L+ M + T+ ++
Sbjct: 356 GDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
RL G LHS +K+G D+ V L+ Y+KCG + D+ K+F + +
Sbjct: 416 SVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+W +I G + + + + + PD A + L CA L G+ I +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
G + +G L+ MY+KCG +E + RVF+ M RDVV W+ MI Y G +AL
Sbjct: 536 LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKAL 595
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ F +M+K + PD + ++ AC+ G + G
Sbjct: 596 ETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI-PE 166
F+ +A + + + +H+LV+ G F L+ YS + VF + P
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
KNV W ++I +S++GL EA++ + L E + PD V+ ACA L D G +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
+ + G ++FVG LV+MY++ G + AR+VFD M RD+V W+++I GY+S+G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
EAL+++ E++ + PD F + VL A L ++ G
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 111/228 (48%), Gaps = 2/228 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F +T WNT+I V F G+Q+ M + P+ TF L CA L
Sbjct: 465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA 524
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG +H +++ G+ ++ + L+ YSKCG L ++ +VF+ + ++V +WT +I
Sbjct: 525 KRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYA 584
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESGLHR 237
Y G E+A++ F + + G+ PDS + ++ AC+ G + G ++ + +
Sbjct: 585 YGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
+ +V++ ++ + +A M ++ D W+++++ ++G
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSG 692
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 1/315 (0%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF 100
S ++ +S G+ + + +FD + WN++I ++ + + +++Y M
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARK 159
P+ +T + V KA + L H L V G V +VFV + L+ Y K G R+A+
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 160 VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD 219
V D + EK+V TALI GYS+ G EAV F+ +L ++P+ VL +C L D
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 220 LGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQG 279
+G+G+ I M +SG + T+L+ MY +C ++++ RVF + + V W+++I G
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
NG AL F +M +++++P+ F + L C+ L + G + G++ F +
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402
Query: 340 PVLGTALIDLYAKCG 354
G+ LIDLY KCG
Sbjct: 403 KYAGSGLIDLYGKCG 417
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 137/266 (51%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
FG T KL+ D+ + L +I G + ++ + SM + P +T+ V
Sbjct: 214 FGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASV 273
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L +C L G +H L+VK+GF + +T LL Y +C + D+ +VF I N
Sbjct: 274 LISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQ 333
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SWT+LI G ++G E A+ FR ++ ++P+S L L C+ L GR I
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+++ G R+ + G+ L+++Y KCG + AR VFD + E DV+ + MI YA NG REA
Sbjct: 394 VTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREA 453
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSAC 315
L LF M L+P+ ++ VL AC
Sbjct: 454 LDLFERMINLGLQPNDVTVLSVLLAC 479
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 4/223 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F PN W ++I G+V N + + M + P SFT + L+ C+ L
Sbjct: 324 VFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAM 383
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
F G +H +V K GF D + +GL+ Y KCG AR VFD + E +V S +I
Sbjct: 384 FEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYS 443
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC--ARLGDLGSGRWIDRYMSESGLH 236
Y+++G EA+DLF ++ +GL+P+ ++ VL AC +RL + G D + + +
Sbjct: 444 YAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGC-ELFDSFRKDKIML 502
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQG 279
N +V++ + G +EEA + ++ D+V W ++
Sbjct: 503 TNDHYAC-MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
N +L C + + I +M +SG + G+ LV+ KCG ++ AR+VFDGM
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGM 125
Query: 266 LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
ER +V W+++I + +EA++++ M N+ PD + + V A + L +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 326 RAKGLMDAEEF-LSNPVLGTALIDLYAKCG 354
R+ GL +SN +G+AL+D+Y K G
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFG 215
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 2/300 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF NT WN +I G + + L+ M G P +T VL+ C L
Sbjct: 81 LFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVL 140
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNVASWTALIC 177
G +H +KTGF DV V GLL Y++C + +A +F+ + EKN +WT+++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
GYS++G +A++ FR L G + + VL ACA + G + + +SG
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKT 260
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
N++V + L++MYAKC ME AR + +GM DVV W++MI G GL EAL +F M
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 298 KENLRPDCFAMVGVLSACA-RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ +++ D F + +L+ A +++ + A L+ + + ++ AL+D+YAK G M
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 149/291 (51%), Gaps = 1/291 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N W +M+ G N I+ + + ++G +TF VL ACA + +G +H
Sbjct: 191 NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
+VK+GF +++V++ L+ Y+KC + AR + + + +V SW ++I G GL
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIG 310
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACA-RLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
EA+ +F + E ++ D + +L A ++ + ++G V L
Sbjct: 311 EALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNAL 370
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
V+MYAK G M+ A +VF+GM+E+DV+ W+A++ G NG EAL+LF M+ + PD
Sbjct: 371 VDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDK 430
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
VLSA A L L+ G + G F S+ + +L+ +Y KCGS+
Sbjct: 431 IVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSL 481
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 151/319 (47%), Gaps = 37/319 (11%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA-RLCHFHLGHTLHSLV 129
WN+MI G V + + ++ MH++ + FT +L A + + H L+
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
VKTG+ V L+ Y+K G + A KVF+ + EK+V SWTAL+ G + +G +EA+
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
LF + G+ PD VL A A L L G+ + +SG ++ V +LV MY
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ------------ 297
KCGS+E+A +F+ M RD++ W+ +I GYA NGL +A + F M+
Sbjct: 476 TKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHY 535
Query: 298 ---------------------KENLRPDCFAMVGVLSACARLGALQLGNR-AKGLMDAEE 335
+ + PD +L+A + G ++ G R AK LM+ E
Sbjct: 536 ACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP 595
Query: 336 FLSNPVLGTALIDLYAKCG 354
+N V L ++Y+ G
Sbjct: 596 --NNAVPYVQLSNMYSAAG 612
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 120/221 (54%), Gaps = 1/221 (0%)
Query: 137 DVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL 196
D F ++ YS L DA K+F P KN SW ALI GY +SG EA +LF +
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 197 EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
G++P+ L VL C L L G I + ++G +V V L+ MYA+C +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 257 EARRVFDGML-ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
EA +F+ M E++ V W++M+ GY+ NG +A++ F ++++E + + + VL+AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
A + A ++G + + F +N + +ALID+YAKC M
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F+ + W ++ G N + + ++L+ +M G P+ VL A A L
Sbjct: 386 VFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTL 445
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H +K+GF + V L+ Y+KCG L DA +F+ + +++ +WT LI G
Sbjct: 446 LEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVG 505
Query: 179 YSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
Y+++GL E+A F + + G+ P + ++ R GD +++ + + +
Sbjct: 506 YAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVK---VEQLLHQMEVEP 562
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLE---RDVVCWSAMIQGYASNGLPREALQLFF 294
+ V ++ K G++E R ++E + V + + Y++ G EA +
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 295 EMQKENL--RPDC 305
M+ N+ P C
Sbjct: 623 LMKSRNISKEPGC 635
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Query: 217 LGDLGSGRWID--RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
LGDL +D R M + R+ F T++ Y+ + +A ++F ++ + W+
Sbjct: 35 LGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWN 94
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
A+I GY +G EA LF+EMQ + ++P+ + + VL C L L G + G
Sbjct: 95 ALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKT 154
Query: 335 EFLSNPVLGTALIDLYAKC 353
F + + L+ +YA+C
Sbjct: 155 GFDLDVNVVNGLLAMYAQC 173
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 155/278 (55%), Gaps = 7/278 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ H +F + WNTMI V N +G+ L + M +QGF + T T +L
Sbjct: 367 GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALL 426
Query: 111 KACARLCHFHLGHTLHSLVVKTG--FVGDVFVETGLLGFYSKCGHLRDARKVFDD--IPE 166
A + L + +G H+ +++ G F G + + L+ YSK G +R ++K+F+ E
Sbjct: 427 SAASNLRNKEIGKQTHAFLIRQGIQFEG---MNSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
++ A+W ++I GY+++G E+ +FR +LE +RP++ + +L AC+++G + G+ +
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
+ L +NVFV + LV+MY+K G+++ A +F ER+ V ++ MI GY +G+
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMG 603
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
A+ LF MQ+ ++PD V VLSAC+ G + G
Sbjct: 604 ERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 165/327 (50%), Gaps = 8/327 (2%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLY-HS 93
+D ++VS + G+ + +FD N +WNTMI V NDC + I+L+ +
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ + + T+ A + L LG H V K + + L+ YS+CG
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGS 368
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ + VF + E++V SW +I + ++GL +E + L + + G + D + +L A
Sbjct: 369 VHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSA 428
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVG--TTLVNMYAKCGSMEEARRVFDG--MLERD 269
+ L + G+ ++ G+ F G + L++MY+K G + ++++F+G ERD
Sbjct: 429 ASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERD 485
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
W++MI GY NG + +F +M ++N+RP+ + +L AC+++G++ LG + G
Sbjct: 486 QATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHG 545
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ N + +AL+D+Y+K G++
Sbjct: 546 FSIRQYLDQNVFVASALVDMYSKAGAI 572
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 160/318 (50%), Gaps = 13/318 (4%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP--ESFTFTF 108
GN + LFD P T LWNT+I G + N+ H+ + Y M + F +++T++
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD------ARKVFD 162
LKACA + G +H +++ V L+ Y C + D RKVFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
++ KNV +W LI Y ++G EA F ++ M ++P + V+V A + +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 223 GRWIDRYMSESGLH--RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
M + G +++FV ++ ++MYA+ G +E +RRVFD +ER++ W+ MI Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 281 ASNGLPREALQLFFE-MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
N E+++LF E + + + D + SA + L ++LG + G + ++ F
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV-SKNFREL 351
Query: 340 P-VLGTALIDLYAKCGSM 356
P V+ +L+ +Y++CGS+
Sbjct: 352 PIVIVNSLMVMYSRCGSV 369
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 4/301 (1%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD N WNT+I V + + + M + P +F V A +
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 117 CHFHLGHTLHSLVVKTG--FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
+ + L++K G +V D+FV + + Y++ G + +R+VFD E+N+ W
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 175 LICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
+I Y ++ E+++LF + + D + A + L + GR ++S++
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
+ + +L+ MY++CGS+ ++ VF M ERDVV W+ MI + NGL E L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+EMQK+ + D + +LSA + L ++G + + + + + + LID+Y+K
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFL-IRQGIQFEGMNSYLIDMYSKS 466
Query: 354 G 354
G
Sbjct: 467 G 467
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 3/210 (1%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN+MI G N ++ M +Q P + T +L AC+++ LG LH +
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ +VFV + L+ YSK G ++ A +F E+N ++T +I GY + G+ E A+
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVNMY 249
LF + E G++PD+ V VL AC+ G + G I M E + + + +M
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDML 668
Query: 250 AKCGSMEEARRVFDGMLERDVVC--WSAMI 277
+ G + EA G+ E + W +++
Sbjct: 669 GRVGRVNEAYEFVKGLGEEGNIAELWGSLL 698
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 166/337 (49%), Gaps = 31/337 (9%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LF++ + WN +I N + +++ M++ G +F VL
Sbjct: 110 GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVL 169
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K+C + L LH VVK G+ G+V +ET ++ Y KC + DAR+VFD+I +
Sbjct: 170 KSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDV 229
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW ++ Y E G +EAV +F +LE+ +RP + + V+ AC+R L G+ I
Sbjct: 230 SWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+ + + V T++ +MY KC +E ARRVFD +D+ W++ + GYA +GL REA
Sbjct: 290 VKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAR 349
Query: 291 QLFFEMQKENL-------------------------------RPDCFAMVGVLSACARLG 319
+LF M + N+ D +V +L+ C+ +
Sbjct: 350 ELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGIS 409
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+Q+G +A G + + +N ++ AL+D+Y KCG++
Sbjct: 410 DVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTL 446
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 157/329 (47%), Gaps = 33/329 (10%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD+ NP+ WN ++R ++ + + ++ M + P + T + V+ AC+R
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD------------- 163
+G +H++ VK V D V T + Y KC L AR+VFD
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 164 ------------------IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
+PE+N+ SW A++ GY + +EA+D + + D+
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
LV +L C+ + D+ G+ ++ G NV V L++MY KCG+++ A F M
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 266 LE-RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
E RD V W+A++ G A G +AL F MQ E +P + + +L+ CA + AL LG
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG 515
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
G + + + + V+ A++D+Y+KC
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKC 544
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 3/308 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G T + LFD N WN M+ G V + + + M Q+ ++ T ++L
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWIL 402
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE-KNV 169
C+ + +G H + + G+ +V V LL Y KCG L+ A F + E ++
Sbjct: 403 NVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDE 462
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW AL+ G + G E+A+ F G+ ++ +P L +L CA + L G+ I +
Sbjct: 463 VSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGF 521
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ G +V + +V+MY+KC + A VF RD++ W+++I+G NG +E
Sbjct: 522 LIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEV 581
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG-TALID 348
+LF ++ E ++PD +G+L AC R G ++LG + M + +S V +I+
Sbjct: 582 FELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIE 641
Query: 349 LYAKCGSM 356
LY K G +
Sbjct: 642 LYCKYGCL 649
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 138/259 (53%), Gaps = 3/259 (1%)
Query: 101 PESFTFTF---VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
PE ++ + ++C+ + S +V + +F+ + Y KCG + DA
Sbjct: 56 PEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDA 115
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
R++F+++PE++ SW A+I +++G+ +E +FR + G+R + VL +C +
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
DL R + + + G NV + T++V++Y KC M +ARRVFD ++ V W+ ++
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
+ Y G EA+ +FF+M + N+RP + V+ AC+R AL++G + +
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV 295
Query: 338 SNPVLGTALIDLYAKCGSM 356
++ V+ T++ D+Y KC +
Sbjct: 296 ADTVVSTSVFDMYVKCDRL 314
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 150/284 (52%), Gaps = 2/284 (0%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
VL + F G+ + +F P+ WN M+ G + + + + I + M Q P+
Sbjct: 356 VLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPD 415
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
T + +L +CARL G +H +V++T + + +GL+ YS+C + + +FD
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD 475
Query: 163 D-IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDL 220
D I E ++A W ++I G+ + L +A+ LFR + + L P+ + VL +C+RL L
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
GR + +SG + FV T L +MY KCG ++ AR+ FD +L ++ V W+ MI GY
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 281 ASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
NG EA+ L+ +M +PD V VL+AC+ G ++ G
Sbjct: 596 GHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 155/325 (47%), Gaps = 41/325 (12%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H +N L+ + ++ + + +L+F + N WN MI G ++
Sbjct: 285 HLNNSLLEIYAKNK----DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTR 340
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M GF P T VL AC R GDV ETG
Sbjct: 341 MRDSGFQPNEVTCISVLGACFR-------------------SGDV--ETG---------- 369
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
R++F IP+ +V++W A++ GYS EEA+ FR + L+PD L +L +
Sbjct: 370 ----RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML-ERDVVC 272
CARL L G+ I + + + +N + + L+ +Y++C ME + +FD + E D+ C
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 273 WSAMIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W++MI G+ N L +AL LF M Q L P+ + VLS+C+RL +L G + GL+
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLV 545
Query: 332 DAEEFLSNPVLGTALIDLYAKCGSM 356
++S+ + TAL D+Y KCG +
Sbjct: 546 VKSGYVSDSFVETALTDMYCKCGEI 570
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 144/307 (46%), Gaps = 44/307 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL------KA 112
+F+ PN + +I G+ + + +Q++ M ++G +S + +L +
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 113 CARLCHFH---LGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
C L + LG +H L ++ GF GD+ + LL Y+K + A +F ++PE NV
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SW +I G+ + +++V+ + + G +P+ + VLGAC R GD+ +G
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG------ 369
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
RR+F + + V W+AM+ GY++ EA
Sbjct: 370 -----------------------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ F +MQ +NL+PD + +LS+CARL L+ G + G++ E N + + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 350 YAKCGSM 356
Y++C M
Sbjct: 461 YSECEKM 467
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 131/278 (47%), Gaps = 10/278 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD + WN MI +V + +Y M GF P FT VL AC+++
Sbjct: 94 VFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLD 153
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD-ARKVFDDIPEKNVASWTALIC 177
G H + VKTG ++FV LL Y+KCG + D +VF+ + + N S+TA+I
Sbjct: 154 GVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIG 213
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG------ACARLGDLGS---GRWIDR 228
G + EAV +FR + E G++ DS L ++L C L ++ G+ I
Sbjct: 214 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC 273
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
G ++ + +L+ +YAK M A +F M E +VV W+ MI G+ +
Sbjct: 274 LALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDK 333
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+++ M+ +P+ + VL AC R G ++ G R
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR 371
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 4/224 (1%)
Query: 59 LFDQTHNP-NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF-PESFTFTFVLKACARL 116
+FD N + WN+MI G N + L+ MHQ P +F VL +C+RL
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
C G H LVVK+G+V D FVET L Y KCG + AR+ FD + KN W +I
Sbjct: 533 CSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMI 592
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE-SGL 235
GY +G +EAV L+R ++ G +PD V VL AC+ G + +G I M G+
Sbjct: 593 HGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGI 652
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQ 278
+ +V+ + G +E+A ++ + + V W ++
Sbjct: 653 EPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 119/232 (51%), Gaps = 10/232 (4%)
Query: 135 VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRG 194
V DV+ L F K G L +A +VFD +PE++V SW +I G E+A+ +++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCG- 253
++ G P L VL AC+++ D G ++GL +N+FVG L++MYAKCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 254 SMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
++ RVF+ + + + V ++A+I G A EA+Q+F M ++ ++ D + +LS
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 314 ------ACARLGAL---QLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
C L + +LG + L F + L +L+++YAK M
Sbjct: 249 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 195 LLEMGLRPDSANLVHVLGACARLGDL----GSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
++ MG++ D+ C RL DL G G + + E + R+V+ +
Sbjct: 32 IVRMGMKSDTY-------LCNRLLDLYIECGDGDYARKVFDEMSV-RDVYSWNAFLTFRC 83
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
K G + EA VFDGM ERDVV W+ MI G +AL ++ M + P F +
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
VLSAC+++ G R G+ N +G AL+ +YAKCG
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 171/334 (51%), Gaps = 13/334 (3%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
++++++ ++ G K+L + WNT++ + N+ + ++ M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHL 154
+G P+ FT + VL AC+ L G LH+ +K G + + FV + L+ Y C +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE-MGLRPDSANLVHVLGA 213
R+VFD + ++ + W A+I GYS++ +EA+ LF G+ E GL +S + V+ A
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C R G I ++ + GL R+ FV TL++MY++ G ++ A R+F M +RD+V W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 274 SAMIQGYASNGLPREALQLFFEMQ-----------KENLRPDCFAMVGVLSACARLGALQ 322
+ MI GY + +AL L +MQ + +L+P+ ++ +L +CA L AL
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G ++ +G+AL+D+YAKCG +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 12/282 (4%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ-GFFPESFTFTFVLKACAR 115
+ +FD + LWN MI G N+ + + L+ M + G S T V+ AC R
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
F +H VVK G D FV+ L+ YS+ G + A ++F + ++++ +W +
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 477
Query: 176 ICGYSESGLCEEAVDLF-----------RGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
I GY S E+A+ L +G + L+P+S L+ +L +CA L L G+
Sbjct: 478 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 537
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
I Y ++ L +V VG+ LV+MYAKCG ++ +R+VFD + +++V+ W+ +I Y +G
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+EA+ L M + ++P+ + V +AC+ G + G R
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 56 PKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACAR 115
P + Q+ +P W ++R V ++ + + Y M G P+++ F +LKA A
Sbjct: 52 PSIFISQSRSPE--WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVAD 109
Query: 116 LCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
L LG +H+ V K G+ V V V L+ Y KCG KVFD I E+N SW +
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI E A++ FR +L+ + P S LV V+ AC+ L + G + + + G
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGLMMGKQVHAYG 228
Query: 235 LHR---NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQ 291
L + N F+ TLV MY K G + ++ + RD+V W+ ++ N EAL+
Sbjct: 229 LRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 292 LFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR------AKGLMDAEEFLSNPVLGTA 345
EM E + PD F + VL AC+ L L+ G G +D F +G+A
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF-----VGSA 343
Query: 346 LIDLYAKC 353
L+D+Y C
Sbjct: 344 LVDMYCNC 351
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 161/330 (48%), Gaps = 20/330 (6%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LV+L R FG + +FD+ N WN++I + + + ++ + M
Sbjct: 137 NTLVNL-YRKCGDFGAVYK---VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 97 QGFFPESFTFTFVLKACARLCH---FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ P SFT V+ AC+ L +G +H+ ++ G + + T L+ Y K G
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGK 251
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L ++ + +++ +W ++ ++ EA++ R ++ G+ PD + VL A
Sbjct: 252 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 311
Query: 214 CARLGDLGSGRWIDRYMSESG-LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
C+ L L +G+ + Y ++G L N FVG+ LV+MY C + RRVFDGM +R +
Sbjct: 312 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL 371
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGL- 330
W+AMI GY+ N +EAL LF M++ L + M GV+ AC R GA G
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 331 ----MDAEEFLSNPVLGTALIDLYAKCGSM 356
+D + F+ N L+D+Y++ G +
Sbjct: 432 VKRGLDRDRFVQN-----TLMDMYSRLGKI 456
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 124/258 (48%), Gaps = 16/258 (6%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D ++ + ++ G +F + + + WNTMI G V ++ D + L H M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 95 H-----------QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
+ P S T +L +CA L G +H+ +K DV V +
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
L+ Y+KCG L+ +RKVFD IP+KNV +W +I Y G +EA+DL R ++ G++P+
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPN 617
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMS-ESGLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
+ V AC+ G + G I M + G+ + +V++ + G ++EA ++
Sbjct: 618 EVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLM 677
Query: 263 DGMLERD---VVCWSAMI 277
+ M+ RD WS+++
Sbjct: 678 N-MMPRDFNKAGAWSSLL 694
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
W L+ S L EAV + ++ +G++PD+ +L A A L D+ G+ I ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 232 ESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+ G +V V TLVN+Y KCG +VFD + ER+ V W+++I S AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLG---ALQLGNR--AKGLMDAEEFLSNPVLGTA 345
+ F M EN+ P F +V V++AC+ L L +G + A GL E L++ ++ T
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE--LNSFIINT- 241
Query: 346 LIDLYAKCGSMG 357
L+ +Y K G +
Sbjct: 242 LVAMYGKLGKLA 253
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 166/341 (48%), Gaps = 36/341 (10%)
Query: 52 NTHHPKL-LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
N +PK+ +Q+ + T W + I + N + + + M G P TF +L
Sbjct: 19 NHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL 78
Query: 111 KACARLCHFH--LGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHLRDAR--------- 158
C LG LH K G + V V T ++G YSK G + AR
Sbjct: 79 SGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK 138
Query: 159 ----------------------KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL 196
K+FD +PE+++ SWTA+I G+ + G EEA+ FR +
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 197 EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
G++PD ++ L AC LG L G W+ RY+ NV V +L+++Y +CG +E
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 257 EARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACA 316
AR+VF M +R VV W+++I G+A+NG E+L F +MQ++ +PD G L+AC+
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSM 356
+G ++ G R +M + +S + L+DLY++ G +
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRL 359
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 5/230 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N ++ +RS G + +FD+ + W MI G V + + + M
Sbjct: 144 NTMIDGYMRS----GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
G P+ L AC L G +H V+ F +V V L+ Y +CG +
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEF 259
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
AR+VF ++ ++ V SW ++I G++ +G E++ FR + E G +PD+ L AC+
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 217 LGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+G + G R+ + + + LV++Y++ G +E+A ++ M
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 147/263 (55%), Gaps = 1/263 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
++LF++ HN + WN M+ G + H ++L+ MH+QG + FT V K C L
Sbjct: 472 EILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 530
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+ G +H+ +K+G+ D++V +G+L Y KCG + A+ FD IP + +WT +I
Sbjct: 531 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 590
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
G E+G E A +F + MG+ PD + + A + L L GR I +
Sbjct: 591 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+ FVGT+LV+MYAKCGS+++A +F + ++ W+AM+ G A +G +E LQLF +M
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 297 QKENLRPDCFAMVGVLSACARLG 319
+ ++PD +GVLSAC+ G
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSG 733
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 152/301 (50%), Gaps = 2/301 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD + WN++I G+ N + + L+ + + G P+ +T T VLKA + L
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Query: 117 CH-FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
L +H +K V D FV T L+ YS+ +++A +F+ ++ +W A+
Sbjct: 430 PEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAM 488
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ GY++S + + LF + + G R D L V C L + G+ + Y +SG
Sbjct: 489 MAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+++V + +++MY KCG M A+ FD + D V W+ MI G NG A +F +
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M+ + PD F + + A + L AL+ G + ++P +GT+L+D+YAKCGS
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 356 M 356
+
Sbjct: 669 I 669
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 102 ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF 161
+ TF +L ++ LG +H + +K G + V L+ Y K AR VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 162 DDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD-L 220
D++ E+++ SW ++I G +++GL EAV LF LL GL+PD + VL A + L + L
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER---DVVCWSAMI 277
+ + + + + FV T L++ Y++ M+EA +F ER D+V W+AM+
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMM 489
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
GY + + L+LF M K+ R D F + V C L A+ G + +
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD 549
Query: 338 SNPVLGTALIDLYAKCGSMG 357
+ + + ++D+Y KCG M
Sbjct: 550 LDLWVSSGILDMYVKCGDMS 569
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D ++ S +L G+ + FD P+ W TMI G ++N ++ M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P+ FT + KA + L G +H+ +K D FV T L+ Y+KCG +
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA +F I N+ +W A++ G ++ G +E + LF+ + +G++PD + VL AC+
Sbjct: 671 DAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Query: 216 RLGDLGSGRWIDRYM-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
G + R M + G+ + + L + + G +++A + + M
Sbjct: 731 HSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 121 LGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYS 180
LG H+ ++ + F+ L+ YSKCG L AR+VFD +P++++ SW +++ Y+
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 181 ESGLC-----EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+S C ++A LFR L + + L +L C G + + Y + GL
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ FV LVN+Y K G ++E + +F+ M RDVV W+ M++ Y G EA+ L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 296 MQKENLRPD 304
L P+
Sbjct: 237 FHSSGLNPN 245
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 136/318 (42%), Gaps = 33/318 (10%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D ++ ++ FG K+LF++ + LWN M++ ++ + I L + H
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P T L+ AR+ G + VK+ G+
Sbjct: 239 SSGLNPNEIT----LRLLARIS----GDDSDAGQVKSFANGN------------------ 272
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA V +I +N + Y SG + F ++E + D + +L
Sbjct: 273 DASSV-SEIIFRNKG-----LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
++ L G+ + + GL + V +L+NMY K AR VFD M ERD++ W++
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNS 386
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG-ALQLGNRAKGLMDAE 334
+I G A NGL EA+ LF ++ + L+PD + M VL A + L L L +
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 335 EFLSNPVLGTALIDLYAK 352
+S+ + TALID Y++
Sbjct: 447 NNVSDSFVSTALIDAYSR 464
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 103/242 (42%), Gaps = 6/242 (2%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDN-DCFHDGIQ----L 90
+ +L++ ++ G+ + + +FD+ + + WN+++ + +C + IQ L
Sbjct: 73 ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 91 YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
+ + Q + T + +LK C + + H K G GD FV L+ Y K
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 151 CGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
G +++ + +F+++P ++V W ++ Y E G EEA+DL GL P+ L +
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Query: 211 LGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
D G + S + +F L + Y G + F M+E DV
Sbjct: 253 ARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGL-SEYLHSGQYSALLKCFADMVESDV 311
Query: 271 VC 272
C
Sbjct: 312 EC 313
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 168/323 (52%), Gaps = 4/323 (1%)
Query: 37 NYLVSLVLRSSF-HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
N LV+ +S+ G+ + + +F + WN +I G ++ + + M
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P+SFT +L AC++L LG +H +++ D+FV +L Y CG L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+ +FD + +K++ SW +I GY ++G + A+ +FR ++ G++ +++ V GAC+
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
L L GR Y + L + F+ +L++MYAK GS+ ++ +VF+G+ E+ W+A
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI GY +GL +EA++LF EMQ+ PD +GVL+AC G + G R M +
Sbjct: 669 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS-S 727
Query: 336 FLSNPVLG--TALIDLYAKCGSM 356
F P L +ID+ + G +
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQL 750
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 167/330 (50%), Gaps = 7/330 (2%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D+ L + ++ G+ + +FD + N F WN +I N+ + + ++ +
Sbjct: 117 RNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 94 M-HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M P+ FT+ V+KACA + +G +H LVVKTG V DVFV L+ FY G
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM----GLRPDSANLV 208
+ DA ++FD +PE+N+ SW ++I +S++G EE+ L ++E PD A LV
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
VL CAR ++G G+ + + + L + + + L++MY+KCG + A+ +F +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQK--ENLRPDCFAMVGVLSACARLGALQLGNR 326
+VV W+ M+ G+++ G + +M E+++ D ++ + C L
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+EF+ N ++ A + YAKCGS+
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 148/308 (48%), Gaps = 2/308 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG--FFPESFTFTF 108
G + +++F +N N WNTM+ G H + M G + T
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+ C LH +K FV + V + Y+KCG L A++VF I K
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKT 460
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V SW ALI G+++S ++D + GL PDS + +L AC++L L G+ +
Sbjct: 461 VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHG 520
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
++ + L R++FV +++++Y CG + + +FD M ++ +V W+ +I GY NG P
Sbjct: 521 FIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDR 580
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
AL +F +M ++ +M+ V AC+ L +L+LG A + + +LID
Sbjct: 581 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 640
Query: 349 LYAKCGSM 356
+YAK GS+
Sbjct: 641 MYAKNGSI 648
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 8/287 (2%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+D ++ VL H G + LFD + + WNT+I G + N + ++
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M G + V AC+ L LG H+ +K D F+ L+ Y+K G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ + KVF+ + EK+ ASW A+I GY GL +EA+ LF + G PD + VL A
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 214 CARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML--ERDV 270
C G + G R++D+ S GL N+ +++M + G +++A RV + E DV
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 271 VCWSAMIQG---YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
W +++ + + + + FE++ E +P+ + ++ L A
Sbjct: 768 GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE--KPENYVLLSNLYA 812
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 157/303 (51%), Gaps = 44/303 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ P+ + N ++RG + + LY M ++G P+ +TFTFVLKAC++L
Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEW 127
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G H VV+ GFV + +V+ L+ F++ CG L A ++FDD + + +W+++ G
Sbjct: 128 RSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSG 187
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y++ G +EA+ LF EM + A W N
Sbjct: 188 YAKRGKIDEAMRLFD---EMPYKDQVA-------------------W------------N 213
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V + L KC M+ AR +FD E+DVV W+AMI GY + G P+EAL +F EM+
Sbjct: 214 VMITGCL-----KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRD 268
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAK-GLMDAEEFLSNPVLGT----ALIDLYAKC 353
PD ++ +LSACA LG L+ G R +++ S+ +GT ALID+YAKC
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 354 GSM 356
GS+
Sbjct: 329 GSI 331
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
KC + AR++FD EK+V +W A+I GY G +EA+ +F+ + + G PD ++
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 210 VLGACARLGDLGSGRWIDRYMSESG-LHRNVFVGT----TLVNMYAKCGSMEEARRVFDG 264
+L ACA LGDL +G+ + Y+ E+ + +++VGT L++MYAKCGS++ A VF G
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ +RD+ W+ +I G A + ++++F EMQ+ + P+ +GV+ AC+ G + G
Sbjct: 341 VKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 325 NRAKGLM-DAEEFLSNPVLGTALIDLYAKCGSM 356
+ LM D N ++D+ + G +
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 11/251 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + WN MI G V+ + + ++ M G P+ T +L ACA L
Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 119 FHLGHTLHSLVVKTGFV-GDVFVET----GLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
G LH +++T V ++V T L+ Y+KCG + A +VF + ++++++W
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWN 350
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE- 232
LI G + E ++++F + + + P+ + V+ AC+ G + GR M +
Sbjct: 351 TLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDM 409
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI---QGYASNGLPRE 288
+ N+ +V+M + G +EEA + M +E + + W ++ + Y + L +
Sbjct: 410 YNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKY 469
Query: 289 ALQLFFEMQKE 299
A + M+K+
Sbjct: 470 ANEKLLSMRKD 480
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 14/245 (5%)
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K L H ++ L+ VG++ L S G L+ A K+FD+IP+ +V+
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASL----SVPGALKYAHKLFDEIPKPDVS 78
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
++ G ++S E+ V L+ + + G+ PD VL AC++L +G +
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
G N +V L+ +A CG + A +FD + V WS+M GYA G EA+
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG-TALIDL 349
+LF EM + D A +++ C + + + A+ L D F V+ A+I
Sbjct: 199 RLFDEMPYK----DQVAWNVMITGCLKCKEM---DSARELFD--RFTEKDVVTWNAMISG 249
Query: 350 YAKCG 354
Y CG
Sbjct: 250 YVNCG 254
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%)
Query: 253 GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
G+++ A ++FD + + DV + +++G A + P + + L+ EM+K + PD + VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 313 SACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
AC++L G G + F+ N + ALI +A CG +G
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLG 164
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD+ H + WNTM+ G+ N C + L+H M + + ++ A ++L
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+ LH LV+K GF+ +GL+ Y C L A VF+++ K+ +SW ++
Sbjct: 215 EKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMM 272
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y+ +G EE ++LF + +R + L A A +GDL G I Y + GL
Sbjct: 273 AAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLI 332
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+V V T+L++MY+KCG +E A ++F + +RDVV WSAMI Y G EA+ LF +M
Sbjct: 333 GDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDM 392
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ +++P+ + VL CA + A +LG + S TA+I +YAKCG
Sbjct: 393 MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 146/305 (47%), Gaps = 1/305 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LF + + W+ MI + I L+ M + P + T T VL
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ CA + LG ++H +K ++ T ++ Y+KCG A K F+ +P K+
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
++ AL GY++ G +A D+++ + G+ PDS +V +L CA D G + +
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREA 289
+ G V L+NM+ KC ++ A +FD E+ V W+ M+ GY +G EA
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ F +M+ E +P+ V ++ A A L AL++G + F S +G +L+D+
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDM 648
Query: 350 YAKCG 354
YAKCG
Sbjct: 649 YAKCG 653
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 150/299 (50%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F++ + W TM+ N F + ++L+ M L+A A +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H V+ G +GDV V T L+ YSKCG L A ++F +I +++V SW+A+I
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y ++G +EA+ LFR ++ + ++P++ L VL CA + G+ I Y ++ +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ T +++MYAKCG A + F+ + +D V ++A+ QGY G +A ++ M+
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ PD MVG+L CA G+ G + F S + ALI+++ KC ++
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
F++ + +N + +G + +Y +M G P+S T +L+ CA +
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDY 518
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNVASWTALICG 178
G ++ ++K GF + V L+ ++KC L A +FD EK+ SW ++ G
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G EEAV FR + +P++ V+++ A A L L G + + + G
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
VG +LV+MYAKCG +E + + F + + +V W+ M+ YA++GL A+ LF MQ+
Sbjct: 639 TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE 698
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSMG 357
L+PD + + VLSAC G ++ G R M + V A ++DL K G G
Sbjct: 699 NELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFG 758
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 5/302 (1%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFVLKACAR 115
+++FD +P LWN+MIRG + + + M ++G P+ ++FTF LKACA
Sbjct: 53 RVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG 112
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
F G +H L+ + G DV++ T L+ Y K L AR+VFD + K+V +W +
Sbjct: 113 SMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTM 172
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ G +++G A+ LF + + D +L +++ A ++L R + + + G
Sbjct: 173 VSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF 232
Query: 236 HRNVFVGTT-LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
+F ++ L++MY C + A VF+ + +D W M+ YA NG E L+LF
Sbjct: 233 ---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M+ ++R + A L A A +G L G + + + + T+L+ +Y+KCG
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 355 SM 356
+
Sbjct: 350 EL 351
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 3/201 (1%)
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE-MGLRPDSANLVHVLGACA 215
+R +FD + + V W ++I GY+ +GL EA+ F + E G+ PD + L ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
D G I ++E GL +V++GT LV MY K + AR+VFD M +DVV W+
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
M+ G A NG AL LF +M+ + D ++ ++ A ++L + GL+ +
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F+ + LID+Y C +
Sbjct: 232 FIF--AFSSGLIDMYCNCADL 250
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +FD+ + F WNTMI V N + LY +M +G +F +L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KACA+L G LHSL+VK G+ F+ L+ Y+K L AR++FD EK A
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 171 S-WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
W +++ YS SG E ++LFR + G P+S +V L AC G+ I
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 230 MSESGLHRN-VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ +S H + ++V L+ MY +CG M +A R+ M DVV W+++I+GY N + +E
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
AL+ F +M + D +M +++A RL L G + + SN +G LID
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 429
Query: 349 LYAKC 353
+Y+KC
Sbjct: 430 MYSKC 434
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 167/332 (50%), Gaps = 15/332 (4%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNP-NTFLWNTMIRGMVDNDCFHDGIQLYH 92
H ++V+ ++ + + LFD + LWN+++ + + ++L+
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG-FVGDVFVETGLLGFYSKC 151
MH G P S+T L AC + LG +H+ V+K+ +++V L+ Y++C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 152 GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
G + A ++ + +V +W +LI GY ++ + +EA++ F ++ G + D ++ ++
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
A RL +L +G + Y+ + G N+ VG TL++MY+KC R F M ++D++
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA---- 327
W+ +I GYA N EAL+LF ++ K+ + D + +L A + L ++ +
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI 513
Query: 328 --KGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
KGL+D V+ L+D+Y KC +MG
Sbjct: 514 LRKGLLDT-------VIQNELVDVYGKCRNMG 538
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 155/294 (52%), Gaps = 2/294 (0%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
F + H+ + W T+I G NDC + ++L+ + ++ + +L+A + L
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSM 503
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
+ +H +++ G + D ++ L+ Y KC ++ A +VF+ I K+V SWT++I
Sbjct: 504 LIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSS 562
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ +G EAV+LFR ++E GL DS L+ +L A A L L GR I Y+ G
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
+ +V+MYA CG ++ A+ VFD + + ++ +++MI Y +G + A++LF +M+ E
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE-EFLSNPVLGTALIDLYAK 352
N+ PD + + +L AC+ G L G +M+ E E P L+D+ +
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 132/256 (51%), Gaps = 5/256 (1%)
Query: 105 TFTFVLKACARLCHFHLGHTLHSLVVKT--GFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
F +VL+ C + G LHS + KT F D F+ L+ Y KCG L DA KVFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
++P++ +W +I Y +G A+ L+ + G+ ++ +L ACA+L D+ S
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYA 281
G + + + G H F+ LV+MYAK + ARR+FDG E+ D V W++++ Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-KGLMDAEEFLSNP 340
++G E L+LF EM P+ + +V L+AC +LG ++ + S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 341 VLGTALIDLYAKCGSM 356
+ ALI +Y +CG M
Sbjct: 321 YVCNALIAMYTRCGKM 336
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+++ R G + + Q +N + WN++I+G V N + + ++ + M
Sbjct: 324 NALIAMYTRC----GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
G + + T ++ A RL + G LH+ V+K G+ ++ V L+ YSKC
Sbjct: 380 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 439
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
+ F + +K++ SWT +I GY+++ EA++LFR + + + D L +L A +
Sbjct: 440 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 499
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L + + I ++ GL V + LV++Y KC +M A RVF+ + +DVV W++M
Sbjct: 500 LKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSM 558
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
I A NG EA++LF M + L D A++ +LSA A L AL G + + F
Sbjct: 559 ISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGF 618
Query: 337 LSNPVLGTALIDLYAKCGSM 356
+ A++D+YA CG +
Sbjct: 619 CLEGSIAVAVVDMYACCGDL 638
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N + +F+ + W +MI N + ++L+ M + G +S +L
Sbjct: 536 NMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILS 595
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
A A L + G +H +++ GF + + ++ Y+ CG L+ A+ VFD I K +
Sbjct: 596 AAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQ 655
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
+T++I Y G + AV+LF + + PD + + +L AC+ G L GR + M
Sbjct: 656 YTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIME 715
Query: 232 -ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI---QGYASNGLP 286
E L LV+M + + EA M E W A++ + ++ +
Sbjct: 716 HEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIG 775
Query: 287 REALQLFFEMQKEN 300
A Q E++ +N
Sbjct: 776 EIAAQRLLELEPKN 789
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 167 bits (424), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 141/254 (55%), Gaps = 4/254 (1%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P FTF +LK+CA+L G LH+ VVKTGF DVF T L+ Y K + DA KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
D++PE+ +AS A + G E+G C +A +F G +S + VLG C GD+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
G + +SG V+VGT+LV+MY++CG A R+F+ + + VV ++A I G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 281 ASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
NG+ +F M+K + P+ V ++ACA L LQ G + GL+ +EF
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 340 PVLGTALIDLYAKC 353
++GTALID+Y+KC
Sbjct: 266 TMVGTALIDMYSKC 279
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 162/339 (47%), Gaps = 42/339 (12%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACARLC 117
+F++ + + +N I G+++N + +++ M + P TF + ACA L
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE-KNVASWTALI 176
+ G LH LV+K F + V T L+ YSKC + A VF ++ + +N+ SW ++I
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSAN------------------------------ 206
G +G E AV+LF L GL+PDSA
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 207 -----LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
L +L AC+ + L +G+ I ++ ++ R++FV T+L++MY KCG ARR+
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 262 FDGM--LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
FD +D V W+ MI GY +G A+++F +++E + P VLSAC+ G
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCG 485
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
++ G++ LM EE+ P +IDL + G +
Sbjct: 486 NVEKGSQIFRLMQ-EEYGYKPSTEHIGCMIDLLGRSGRL 523
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P++ WN++I G + + + M P T +L AC+ + G
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD--DIPEKNVASWTALICGYSES 182
+H V+K D+FV T L+ Y KCG AR++FD + K+ W +I GY +
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRNVFV 241
G CE A+++F L E + P A VL AC+ G++ G I R M E G +
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI---QGYASNGLPREALQLFFEMQK 298
++++ + G + EA+ V D M E +S+++ + + L EA E++
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEP 569
Query: 299 ENLRP 303
EN P
Sbjct: 570 ENPAP 574
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 3/153 (1%)
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
P+ +L +CA+LGD+ GR + + ++G +VF T LV+MY K + +A +V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 262 FDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL 321
D M ER + +A + G NG R+A ++F + + + + VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 322 QLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ G + L F +GT+L+ +Y++CG
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCG 178
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 154/288 (53%), Gaps = 4/288 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPES-FTFTFVLKACARLC 117
+F Q NP NTMIR + +G +L+ S+ + P + + +F LK C +
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
G +H + GF+ D + T L+ YS C + DA KVFD+IP+++ SW L
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 178 GYSESGLCEEAVDLFRGL---LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
Y + + + LF + ++ ++PD + L ACA LG L G+ + ++ E+G
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
L + + TLV+MY++CGSM++A +VF GM ER+VV W+A+I G A NG +EA++ F
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
EM K + P+ + G+LSAC+ G + G M + EF P L
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNL 355
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR---KVFDDIPEKNVASWTALICGYSE 181
+H+L+++T + + V L + RD +VF ++ +I +S
Sbjct: 30 IHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFSL 89
Query: 182 SGLCEEAVDLFRGLLEMGLRP-DSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
S E LFR L P + + L C + GDL G I + G +
Sbjct: 90 SQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSL 149
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
+ TTL+++Y+ C + +A +VFD + +RD V W+ + Y N R+ L LF +M+ +
Sbjct: 150 LMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDV 209
Query: 301 ---LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++PD + L ACA LGAL G + +D L L+ +Y++CGSM
Sbjct: 210 DGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 153/285 (53%), Gaps = 3/285 (1%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
N MI + I+L+ M Q+G + F+ +L L +LG +H +K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
+G V D+ V + L YSKCG L ++ K+F IP K+ A W ++I G++E G EA+ L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
F +L+ G PD + L VL C+ L G+ I Y +G+ + + +G+ LVNMY+K
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
CGS++ AR+V+D + E D V S++I GY+ +GL ++ LF +M D FA+ +
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
L A A LG + + + P +G++L+ +Y+K GS+
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 165/301 (54%), Gaps = 9/301 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + + N + WNT+I G + N + L+H M P+S+T++ VL ACA L
Sbjct: 207 VFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK 266
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G + + V+K G DVFV T ++ Y+KCGH+ +A +VF IP +V SWT ++ G
Sbjct: 267 LRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y++S A+++F+ + G+ ++ + V+ AC R + + ++ +SG + +
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 239 VFVGTTLVNMYAKCGSMEEARRVF---DGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
V L++MY+K G ++ + +VF D + +++V + MI ++ + P +A++LF
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTR 443
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M +E LR D F++ +LS L L LG + G + + +G++L LY+KCGS
Sbjct: 444 MLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 356 M 356
+
Sbjct: 501 L 501
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 141/272 (51%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ LF + W +MI G + + I L+ M G P+ T VL
Sbjct: 499 GSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVL 558
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
C+ G +H ++ G + + + L+ YSKCG L+ AR+V+D +PE +
Sbjct: 559 TVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPV 618
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
S ++LI GYS+ GL ++ LFR ++ G DS + +L A A + G + Y+
Sbjct: 619 SCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
++ GL VG++L+ MY+K GS+++ + F + D++ W+A+I YA +G EAL
Sbjct: 679 TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEAL 738
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
Q++ M+++ +PD VGVLSAC+ G ++
Sbjct: 739 QVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 144/321 (44%), Gaps = 1/321 (0%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D +L +L + G+ LFD P+ N MI G + F + ++ + MH
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
GF ++ V+ AC+ L + +K G+ VE+ L+ +SK
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA KVF D NV W +I G + DLF + +PDS VL ACA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
L L G+ + + + G +VFV T +V++YAKCG M EA VF + VV W+
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTV 321
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
M+ GY + AL++F EM+ + + + V+SAC R + ++ +
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F + + ALI +Y+K G +
Sbjct: 382 FYLDSSVAAALISMYSKSGDI 402
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 8/248 (3%)
Query: 114 ARLCHFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASW 172
+RLC+ L + +++ + DVF+ LL +YS G + DA K+FD IP+ +V S
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE 232
+I GY + L EE++ F + +G + + V+ AC+ L + + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
G V + L+++++K E+A +VF L +V CW+ +I G N L
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 293 FFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM---DAEEFLSNPVLGTALIDL 349
F EM +PD + VL+ACA L L+ G + + AE+ + TA++DL
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF----VCTAIVDL 294
Query: 350 YAKCGSMG 357
YAKCG M
Sbjct: 295 YAKCGHMA 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + ++D+ + +++I G + DG L+ M GF +SF + +L
Sbjct: 600 GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KA A LG +H+ + K G + V + LL YSK G + D K F I ++
Sbjct: 660 KAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLI 719
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+WTALI Y++ G EA+ ++ + E G +PD V VL AC+ G +
Sbjct: 720 AWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGG----------LV 769
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
ES H N ++V Y +E R + VC M+ +G REA
Sbjct: 770 EESYFHLN-----SMVKDYG----IEPENRHY--------VC---MVDALGRSGRLREAE 809
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA 327
M +++PD +L+AC G ++LG A
Sbjct: 810 SFINNM---HIKPDALVWGTLLAACKIHGEVELGKVA 843
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 172/351 (49%), Gaps = 33/351 (9%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D++ +S ++ + G + + LFD+ N LWN+MI G + N+ + + L++ M
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK----- 150
+ +S T V+ AC L G +H K G + D+ V + LL YSK
Sbjct: 312 NETR-EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 151 --------------------------CGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
CG + DA++VF+ I K++ SW ++ G+S++G
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
E ++ F + ++ L D +L V+ ACA + L G + + GL + V ++
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
L+++Y KCG +E RRVFD M++ D V W++MI GYA+NG EA+ LF +M +RP
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEE-FLSNPVLGTALIDLYAKCG 354
+ VL+AC G ++ G + M + F+ + + ++DL A+ G
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAG 601
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 64/382 (16%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+D Y ++V+ G + LF+ + N+++ G + N + ++L+
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKE 180
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
++ F ++ T T VLKACA L G +H+ ++ G D + + L+ Y+KCG
Sbjct: 181 LN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLF---------------RGLLEM 198
LR A + + I E + S +ALI GY+ G E+ LF G +
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 199 GL---------------RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
+ R DS L V+ AC LG L +G+ + + + GL ++ V +
Sbjct: 298 NMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 244 TLVNMYAKCGS-------------------------------MEEARRVFDGMLERDVVC 272
TL++MY+KCGS +++A+RVF+ + + ++
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W++M G++ NG E L+ F +M K +L D ++ V+SACA + +L+LG +
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 333 AEEFLSNPVLGTALIDLYAKCG 354
S+ V+ ++LIDLY KCG
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCG 499
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 9/310 (2%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D L++ +++ F G K +F++ N + WN+M G N C + ++ +H MH
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ + + + V+ ACA + LG + + G D V + L+ Y KCG +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
R+VFD + + + W ++I GY+ +G EA+DLF+ + G+RP + VL AC
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 216 RLGDLGSGRWIDRYMS-ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
G + GR + M + G + + +V++ A+ G +EEA + + M + D W
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMW 622
Query: 274 SAMIQGYASNG---LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL 330
S++++G +NG + ++A + E++ EN A V + + A G + + L
Sbjct: 623 SSILRGCVANGYKAMGKKAAEKIIELEPEN----SVAYVQLSAIFATSGDWESSALVRKL 678
Query: 331 MDAEEFLSNP 340
M NP
Sbjct: 679 MRENNVTKNP 688
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHLRDARKVFDDI 164
+ +L++C+ L + L++K GF+ V V LL YS+ G + AR +FD++
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
P++N SW +I GY SG E+ L R
Sbjct: 89 PDRNYFSWNTMIEGYMNSG--EKGTSL--------------------------------R 114
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
+ D G NV +V+ +AK G + ARR+F+ M E+DVV ++++ GY NG
Sbjct: 115 FFDMMPERDGYSWNV-----VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
EAL+LF E+ N D + VL ACA L AL+ G + + + + +
Sbjct: 170 YAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNS 226
Query: 345 ALIDLYAKCGSM 356
+L+++YAKCG +
Sbjct: 227 SLVNVYAKCGDL 238
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 176/346 (50%), Gaps = 14/346 (4%)
Query: 15 SFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTM 74
+ NQVK H H+D ++ ++ + T+ +F+Q PN L N++
Sbjct: 31 NLNQVKQLHAQIIRRNL--HEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSL 88
Query: 75 IRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF 134
IR N + ++ M + G F ++FT+ F+LKAC+ + +H+ + K G
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGL 148
Query: 135 VGDVFVETGLLGFYSKCGHL--RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLF 192
D++V L+ YS+CG L RDA K+F+ + E++ SW +++ G ++G +A LF
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 193 RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC 252
EM R D + +L AR ++ + M E RN +T+V Y+K
Sbjct: 209 D---EMPQR-DLISWNTMLDGYARCREMSKAFELFEKMPE----RNTVSWSTMVMGYSKA 260
Query: 253 GSMEEARRVFDGML--ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
G ME AR +FD M ++VV W+ +I GYA GL +EA +L +M L+ D A++
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+L+AC G L LG R ++ SN + AL+D+YAKCG++
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNL 366
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 142/268 (52%), Gaps = 10/268 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF++ +T WN+M+ G+V D +L+ M Q+ ++ +L AR
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLI----SWNTMLDGYARCRE 231
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD--IPEKNVASWTALI 176
L + + V T ++G YSK G + AR +FD +P KNV +WT +I
Sbjct: 232 MSKAFELFEKMPERNTVS---WSTMVMG-YSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY+E GL +EA L ++ GL+ D+A ++ +L AC G L G I + S L
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N +V L++MYAKCG++++A VF+ + ++D+V W+ M+ G +G +EA++LF M
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLG 324
++E +RPD + VL +C G + G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 211 LGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
L CA L + + + + LH ++ + L++ + C A RVF+ + E +V
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL 330
+++I+ +A N P +A +F EMQ+ L D F +L AC+ L +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 331 MDAEEFLSNPVLGTALIDLYAKCGSMG 357
++ S+ + ALID Y++CG +G
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLG 169
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
Y+++ +L GN +F+ + WNTM+ G+ + + I+L+ M ++
Sbjct: 351 YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 98 GFFPESFTFTFVLKACAR-------LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
G P+ TF VL +C + +F+ ++ LV + G L+ +
Sbjct: 411 GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG------CLVDLLGR 464
Query: 151 CGHLRDARKVFDDIP-EKNVASWTALICG---YSESGLCEEAVD 190
G L++A KV +P E NV W AL+ ++E + +E +D
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 1/300 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
KL + N WNTM++G C I+L+ + G +S + T V+ +C+ +
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHI 446
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG +LH VVKT + V L+ Y K G L A ++F + + NV +W A+I
Sbjct: 447 GAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMI 505
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y E+A+ LF ++ +P S LV +L AC G L G+ I RY++E+
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHE 565
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N+ + L++MYAKCG +E++R +FD ++D VCW+ MI GY +G A+ LF +M
Sbjct: 566 MNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM 625
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++ +++P + +LSAC G ++ G + M + N + L+DL ++ G++
Sbjct: 626 EESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNL 685
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 165/323 (51%), Gaps = 5/323 (1%)
Query: 35 QDNYLVSLVLRSSF-HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+N V+ L SS+ +G + +F + FLWN++I+ N + + + S
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK-TGFVGDVFVETGLLGFYSKCG 152
M G P+ FT V+ ACA L FH+G +H LV+K GF + V + FYSKCG
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGL---RPDSANLVH 209
L+DA VFD++P+++V +WTA+I G+ ++G E + + G +P+ L
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
AC+ LG L GR + + ++GL + FV +++ + Y+K G+ EA F + + D
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
+ W+++I A +G E+ +F+EMQ + + PD + +++ ++ + G G
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 330 LMDAEEFLSNPVLGTALIDLYAK 352
+ F + + +L+ +Y K
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCK 378
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 2/305 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN L F + + + F W ++I + + + ++ M +G P+ + ++
Sbjct: 279 GNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NV 169
++ G H V++ F D V LL Y K L A K+F I E+ N
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNK 398
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+W ++ GY + + ++LFR + +G+ DSA+ V+ +C+ +G + G+ + Y
Sbjct: 399 EAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ ++ L + V +L+++Y K G + A R+F + +V+ W+AMI Y +A
Sbjct: 459 VVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKA 517
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ LF M EN +P +V +L AC G+L+ G + E N L ALID+
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 350 YAKCG 354
YAKCG
Sbjct: 578 YAKCG 582
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
+ N WN MI V + I L+ M + F P S T +L AC G
Sbjct: 495 DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQM 554
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H + +T ++ + L+ Y+KCGHL +R++FD +K+ W +I GY G
Sbjct: 555 IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
E A+ LF + E ++P + +L AC G + G+ + M + + N+ +
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSC 674
Query: 245 LVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
LV++ ++ G++EEA M D V W ++ ++G
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHG 715
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 4/234 (1%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
++L++ G ++FV + L+ Y+ G + +VF + +++ W ++I + +G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI-DRYMSESGLHRNVFVGTT 244
++ F +L G PD V+ ACA L G ++ + G RN VG +
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL--- 301
V Y+KCG +++A VFD M +RDVV W+A+I G+ NG L +M
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
+P+ + AC+ LGAL+ G G S+ + +++ Y+K G+
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGN 280
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 150/287 (52%), Gaps = 5/287 (1%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
+LV++++ F + LFDQ N W TMI ++L M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
P +T++ VL++C + + LH ++K G DVFV + L+ ++K G DA
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
VFD++ + W ++I G++++ + A++LF+ + G + A L VL AC L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
L G + ++ +++ + LV+MY KCGS+E+A RVF+ M ERDV+ WS MI
Sbjct: 274 ALLELG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
G A NG +EAL+LF M+ +P+ +VGVL AC+ G L+ G
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG 378
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 143/264 (54%), Gaps = 5/264 (1%)
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
S+ G + +S T++ ++K C H G+ + + G +F+ L+ Y K
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
L DA ++FD +P++NV SWT +I YS+ + ++A++L +L +RP+ VL
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
+C + D+ R + + + GL +VFV + L++++AK G E+A VFD M+ D +
Sbjct: 171 SCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+++I G+A N AL+LF M++ + + VL AC L L+LG +A +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH--VH 285
Query: 333 AEEFLSNPVLGTALIDLYAKCGSM 356
++ + +L AL+D+Y KCGS+
Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSL 309
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 4/244 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D ++ S ++ G +FD+ + +WN++I G N ++L+ M
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ GF E T T VL+AC L LG H +VK + D+ + L+ Y KCG L
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLE 310
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DA +VF+ + E++V +W+ +I G +++G +EA+ LF + G +P+ +V VL AC+
Sbjct: 311 DALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS 370
Query: 216 RLGDLGSGRWIDRYMSE-SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
G L G + R M + G+ ++++ K G +++A ++ + M E D V W
Sbjct: 371 HAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTW 430
Query: 274 SAMI 277
++
Sbjct: 431 RTLL 434
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 190 DLFRGLLEM------GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
DL R + M GL DSA ++ C + G I R++ +G +F+
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
L+NMY K + +A ++FD M +R+V+ W+ MI Y+ + ++AL+L M ++N+RP
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 304 DCFAMVGVLSAC---ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ + VL +C + + L G +GL S+ + +ALID++AK G
Sbjct: 161 NVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE------SDVFVRSALIDVFAKLG 208
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 145/278 (52%), Gaps = 5/278 (1%)
Query: 51 GNTHHPKLLFDQTH--NPNTFLWNTMIRGM-VDNDCFHDGIQLYHSMHQQGFFPESFTFT 107
G+ KL+F+ + WN+M + V + F D LY M ++ F P+ TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAF-DAFGLYCLMLREEFKPDLSTFI 260
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
+ +C G +HS + G D+ + YSK AR +FD + +
Sbjct: 261 NLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
SWT +I GY+E G +EA+ LF +++ G +PD L+ ++ C + G L +G+WID
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 228 RYMSESGLHR-NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
G R NV + L++MY+KCGS+ EAR +FD E+ VV W+ MI GYA NG+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
EAL+LF +M + +P+ + VL ACA G+L+ G
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN IR V+ + + + L+ M + GF P +FTF FV KACARL +H+ ++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
K+ F DVFV T + + KC + A KVF+ +PE++ +W A++ G+ +SG ++A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
LFR + + PDS ++ ++ + + L + G+ V V T ++ Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 251 KCGSMEEARRVFDGML--ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
KCG ++ A+ VF+ + +R VV W++M + Y+ G +A L+ M +E +PD
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 309 VGVLSACARLGALQLG 324
+ + ++C L G
Sbjct: 260 INLAASCQNPETLTQG 275
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 143/305 (46%), Gaps = 11/305 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F++ + WN M+ G + L+ M P+S T ++++ +
Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKS 168
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP--EKNVASWTALI 176
L +H++ ++ G V V + Y KCG L A+ VF+ I ++ V SW ++
Sbjct: 169 LKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMF 228
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
YS G +A L+ +L +PD + +++ +C L GR I + G
Sbjct: 229 KAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTD 288
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+++ T ++MY+K AR +FD M R V W+ MI GYA G EAL LF M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL-----SNPVLGTALIDLYA 351
K +PD ++ ++S C + G+L+ G +DA + N ++ ALID+Y+
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGK----WIDARADIYGCKRDNVMICNALIDMYS 404
Query: 352 KCGSM 356
KCGS+
Sbjct: 405 KCGSI 409
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 259 RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARL 318
RR++ V W+ I+ + P E+L LF EM++ P+ F V ACARL
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + F S+ +GTA +D++ KC S+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSV 103
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 34 HQDNYLVSLVLRSSFHF-GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYH 92
+ N V L +++ G+ + +F+ + +W ++ V+N F D ++L
Sbjct: 177 YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS 236
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M GF P ++TF LKA L F +H ++KT +V D V GLL Y++ G
Sbjct: 237 CMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG 296
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ DA KVF+++P+ +V W+ +I + ++G C EAVDLF + E + P+ L +L
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
CA G G + + + G +++V L+++YAKC M+ A ++F + ++ V
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W+ +I GY + G +A +F E + + L ACA L ++ LG + GL
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAI 476
Query: 333 AEEFLSNPVLGTALIDLYAKCGSM 356
+ +LID+YAKCG +
Sbjct: 477 KTNNAKKVAVSNSLIDMYAKCGDI 500
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 136/268 (50%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F++ + W+ MI N ++ + L+ M + P FT + +L CA
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG LH LVVK GF D++V L+ Y+KC + A K+F ++ KN SW +I G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G +A +FR L + LGACA L + G + ++ +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V V +L++MYAKCG ++ A+ VF+ M DV W+A+I GY+++GL R+AL++ M+
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNR 326
+ +P+ +GVLS C+ G + G
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 4/321 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D + +++L + G LFD+ N + T+ +G D I LY +H
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
++G FT LK L + LHS +VK G+ + FV L+ YS CG +
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
AR VF+ I K++ W ++ Y E+G E+++ L + G P++ L A
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
LG + + + ++ + VG L+ +Y + G M +A +VF+ M + DVV WS
Sbjct: 259 GLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF 318
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
MI + NG EA+ LF M++ + P+ F + +L+ CA LG + GL+
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F + + ALID+YAKC M
Sbjct: 379 FDLDIYVSNALIDVYAKCEKM 399
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 102 ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF 161
+S + +L+ C + +H ++K G D+F LL Y K G +DA +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 162 DDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG 221
D++PE+N S+ L GY+ C++ + L+ L G + L L
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
W+ + + G N FVG L+N Y+ CGS++ AR VF+G+L +D+V W+ ++ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
NG ++L+L M+ P+ + L A LGA G + ++ +P
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 342 LGTALIDLYAKCGSM 356
+G L+ LY + G M
Sbjct: 284 VGVGLLQLYTQLGDM 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + + N WNT+I G + ++ + TF+ L ACA L
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG +H L +KT V V L+ Y+KCG ++ A+ VF+++ +VASW ALI G
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSESGLHR 237
YS GL +A+ + + + +P+ + VL C+ G + G+ + + + G+
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+ T +V + + G +++A ++ +G+ E V+ W AM+ + A + E+
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRA 327
K N + + VL + GA Q N A
Sbjct: 645 LKINPKDEA---TYVLVSNMYAGAKQWANVA 672
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 147/296 (49%), Gaps = 1/296 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F N+ W+ +I G V N+ ++ + M + + VL++CA L
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LG LH+ +K+ F D V T L Y+KC +++DA+ +FD+ N S+ A+I G
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
YS+ +A+ LF L+ GL D +L V ACA + L G I +S L +
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 416
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V V ++MY KC ++ EA RVFD M RD V W+A+I + NG E L LF M +
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 476
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ PD F +L AC G+L G + SN +G +LID+Y+KCG
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 531
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 162/320 (50%), Gaps = 24/320 (7%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + WN +I N ++ + L+ SM + P+ FTF +LKAC
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GS 497
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-NVA------- 170
G +HS +VK+G + V L+ YSKCG + +A K+ ++ NV+
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 171 ------------SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
SW ++I GY E+A LF ++EMG+ PD VL CA L
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQ 278
G G+ I + + L +V++ +TLV+MY+KCG + ++R +F+ L RD V W+AMI
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
GYA +G EA+QLF M EN++P+ + +L ACA +G + G +M + L
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGL- 736
Query: 339 NPVLG--TALIDLYAKCGSM 356
+P L + ++D+ K G +
Sbjct: 737 DPQLPHYSNMVDILGKSGKV 756
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 152/325 (46%), Gaps = 21/325 (6%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N ++LFD + N N +N MI G + + L+H + G + + + V +
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
ACA + G ++ L +K+ DV V + Y KC L +A +VFD++ ++ S
Sbjct: 391 ACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS 450
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
W A+I + ++G E + LF +L + PD +L AC G LG G I +
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIV 509
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD--------------------VV 271
+SG+ N VG +L++MY+KCG +EEA ++ +R V
Sbjct: 510 KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 569
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W+++I GY +A LF M + + PD F VL CA L + LG + +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 332 DAEEFLSNPVLGTALIDLYAKCGSM 356
+E S+ + + L+D+Y+KCG +
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDL 654
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 143/287 (49%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN+M+ G + N I+++ M ++G + TF +LK C+ L LG +H +VV
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ G DV + LL Y+K ++ +VF IPEKN SW+A+I G ++ L A+
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
F+ + ++ + VL +CA L +L G + + +S + V T ++MYA
Sbjct: 268 FFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA 327
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KC +M++A+ +FD + ++AMI GY+ +AL LF + L D ++ G
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
V ACA + L G + GL + + A ID+Y KC ++
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 142/324 (43%), Gaps = 42/324 (12%)
Query: 74 MIRGMVD-NDCFHDGIQLYHSMHQQGFFPE---------SFTFTFVLKACARLCHFHLGH 123
M R +V N C + I Y + +F + + F+FV K CA+ LG
Sbjct: 10 MTRSVVSFNRCLTEKIS-YRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGK 68
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSES- 182
H+ ++ +GF FV LL Y+ A VFD +P ++V SW +I GYS+S
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 183 ------------------------------GLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
G +++++F + G+ D +L
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
C+ L D G I + G +V + L++MYAK E+ RVF G+ E++ V
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
WSA+I G N L AL+ F EMQK N VL +CA L L+LG +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 333 AEEFLSNPVLGTALIDLYAKCGSM 356
+F ++ ++ TA +D+YAKC +M
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNM 332
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 176/353 (49%), Gaps = 39/353 (11%)
Query: 37 NYLVSLVLRSSFHFGN------THHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQL 90
N+L +++ + HF + K + + ++F W ++R + + F + + +
Sbjct: 32 NHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDV 91
Query: 91 YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
Y MH G P S T VL+AC ++ + G +H+ +K G G V+V+TGL+G YS+
Sbjct: 92 YIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSR 151
Query: 151 CGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
G++ A+K FDDI EKN SW +L+ GY ESG +EA +F + E D+ + +
Sbjct: 152 LGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE----KDAVSWNLI 207
Query: 211 LGACARLGDLGSGRWIDRYMS-ESGLHRNVFVG--------------------------T 243
+ + A+ GD+G+ + M +S N+ +G
Sbjct: 208 ISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI 267
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN--L 301
T+++ Y K G ++ A +F M ++D + + AMI Y NG P++AL+LF +M + N +
Sbjct: 268 TMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+PD + V+SA ++LG G + + + +L T+LIDLY K G
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 147/304 (48%), Gaps = 43/304 (14%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K FD NT WN+++ G +++ + +++ + ++ ++ ++ ++ + A+
Sbjct: 159 KKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKK 214
Query: 117 CHFHLGHTLHS-LVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
+L S + +K+ ++ L+G Y C ++ AR FD +P+KN SW +
Sbjct: 215 GDMGNACSLFSAMPLKSPASWNI-----LIGGYVNCREMKLARTYFDAMPQKNGVSWITM 269
Query: 176 ICGYSESGLCEEAVDLFR-------------------------------GLLEMG--LRP 202
I GY++ G + A +LFR +LE ++P
Sbjct: 270 ISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQP 329
Query: 203 DSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
D L V+ A ++LG+ G W++ Y++E G+ + + T+L+++Y K G +A ++F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 263 DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
+ ++D V +SAMI G NG+ EA LF M ++ + P+ G+LSA + G +Q
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQ 449
Query: 323 LGNR 326
G +
Sbjct: 450 EGYK 453
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 7 NLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSF-HFGNTHHPKLLFDQTHN 65
N+L+ G + ++K+A Q N + + + S + G+ + LF
Sbjct: 236 NILIGGYVNCREMKLARTYFDAMP----QKNGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF--PESFTFTFVLKACARLCHFHLGH 123
+ +++ MI N D ++L+ M ++ + P+ T + V+ A ++L + G
Sbjct: 292 KDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGT 351
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
+ S + + G D + T L+ Y K G A K+F ++ +K+ S++A+I G +G
Sbjct: 352 WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGING 411
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
+ EA LF ++E + P+ +L A + G + G M + L +
Sbjct: 412 MATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYG 471
Query: 244 TLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
+V+M + G +EEA + M ++ + W A++
Sbjct: 472 IMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 158/303 (52%), Gaps = 43/303 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQ------LYHSMHQQGFFPESFTFTFVLKA 112
+F Q NPN F++N +IR CF G + Y M + +P++ TF F++KA
Sbjct: 73 IFSQIQNPNLFVFNLLIR------CFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGL-------------------LGF------ 147
+ + +G HS +V+ GF DV+VE L +GF
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 148 ------YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
Y KCG + +AR++FD++P +N+ +W+ +I GY+++ E+A+DLF + G+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
+ +V V+ +CA LG L G Y+ +S + N+ +GT LV+M+ +CG +E+A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 262 FDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL 321
F+G+ E D + WS++I+G A +G +A+ F +M P VLSAC+ G +
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 322 QLG 324
+ G
Sbjct: 367 EKG 369
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 41/286 (14%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG-------FYSKCGHLRDARKVF 161
+L++C+ + +H +++T + DVFV + LL F L A +F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 162 DDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG 221
I N+ + LI +S +A + +L+ + PD+ ++ A + + +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYA------------------------------- 250
G + G +V+V +LV+MYA
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KCG +E AR +FD M R++ WS MI GYA N +A+ LF M++E + + MV
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 311 VLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
V+S+CA LGAL+ G RA + N +LGTAL+D++ +CG +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 1/306 (0%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
FG + LFD N WNTM+ G+V + +G++ + M G P SF +
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 110 LKACARL-CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+ AC R F G +H V K+G + DV+V T +L Y G + +RKVF+++P++N
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
V SWT+L+ GYS+ G EE +D+++G+ G+ + ++ V+ +C L D GR I
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ +SGL + V +L++M G+++ A +FD M ERD + W+++ YA NG E
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
+ ++F M++ + + + +LS + + G GL+ F S + L+
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 349 LYAKCG 354
+YA G
Sbjct: 305 MYAGAG 310
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 1/308 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + L+F Q + WN+++ V++ D + L SM G TFT L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC F G LH LVV +G + + L+ Y K G + ++R+V +P ++V
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 429
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL-GSGRWIDRY 229
+W ALI GY+E ++A+ F+ + G+ + +V VL AC GDL G+ + Y
Sbjct: 430 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 489
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ +G + V +L+ MYAKCG + ++ +F+G+ R+++ W+AM+ A +G E
Sbjct: 490 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 549
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L+L +M+ + D F+ LSA A+L L+ G + GL F + + A D+
Sbjct: 550 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADM 609
Query: 350 YAKCGSMG 357
Y+KCG +G
Sbjct: 610 YSKCGEIG 617
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 151/322 (46%), Gaps = 5/322 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+N L+S++ GN + +FDQ +T WN++ N + +++ M
Sbjct: 198 ENSLISML----GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 253
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ S T + +L + H G +H LVVK GF V V LL Y+ G
Sbjct: 254 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 313
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+A VF +P K++ SW +L+ + G +A+ L ++ G + L AC
Sbjct: 314 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 373
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
GR + + SGL N +G LV+MY K G M E+RRV M RDVV W+A
Sbjct: 374 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 433
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA-LQLGNRAKGLMDAE 334
+I GYA + P +AL F M+ E + + +V VLSAC G L+ G + +
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
F S+ + +LI +YAKCG +
Sbjct: 494 GFESDEHVKNSLITMYAKCGDL 515
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
D Y+ + +L +G + +F++ + N W +++ G D + I +Y M
Sbjct: 92 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 151
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+G + + V+ +C L LG + VVK+G + VE L+ G++
Sbjct: 152 RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 211
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
A +FD + E++ SW ++ Y+++G EE+ +F + +S + +L
Sbjct: 212 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 271
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+ GR I + + G V V TL+ MYA G EA VF M +D++ W+
Sbjct: 272 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+++ + ++G +AL L M + L+AC + G GL+
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 391
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
N ++G AL+ +Y K G M
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEM 413
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 8/324 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LVS+ + G + + Q + WN +I G +++ + + +M
Sbjct: 401 NALVSMYGK----IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456
Query: 97 QGFFPESFTFTFVLKACARLCHF-HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+G T VL AC G LH+ +V GF D V+ L+ Y+KCG L
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
++ +F+ + +N+ +W A++ + G EE + L + G+ D + L A A
Sbjct: 517 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 576
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+L L G+ + + G + F+ +MY+KCG + E ++ + R + W+
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 636
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
+I +G E F EM + ++P V +L+AC+ G + G A M A +
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG-LAYYDMIARD 695
Query: 336 FLSNPVLG--TALIDLYAKCGSMG 357
F P + +IDL + G +
Sbjct: 696 FGLEPAIEHCICVIDLLGRSGRLA 719
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 148 YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
Y+K G ++ AR +FD +P +N SW ++ G GL E ++ FR + ++G++P S +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 208 VHVLGACARLGDL-GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
++ AC R G + G + ++++SGL +V+V T ++++Y G + +R+VF+ M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+R+VV W++++ GY+ G P E + ++ M+ E + + +M V+S+C L LG +
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
G + S + +LI + GSMG
Sbjct: 182 IIGQVVKSGLESKLAVENSLISM---LGSMG 209
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 14/287 (4%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H N L+++ + G+ + LF+ N N WN M+ + + ++L
Sbjct: 500 HVKNSLITMYAKC----GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M G + F+F+ L A A+L G LH L VK GF D F+ YSKCG
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 615
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ + K+ +++ SW LI G EE F +LEMG++P V +L A
Sbjct: 616 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 675
Query: 214 CARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVV 271
C+ G + G + D + GL + ++++ + G + EA M ++ + +
Sbjct: 676 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 735
Query: 272 CWSAMIQGYASNG---LPREALQLFFEMQKEN-----LRPDCFAMVG 310
W +++ +G R+A + +++ E+ L + FA G
Sbjct: 736 VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 248 MYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFA 307
MY K G ++ AR +FD M R+ V W+ M+ G GL E ++ F +M ++P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 308 MVGVLSACARLGAL-QLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ +++AC R G++ + G + G + LS+ + TA++ LY G
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 108
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 157/297 (52%), Gaps = 45/297 (15%)
Query: 62 QTHNPNTFLWNTMIRGMVDNDCFHD--GIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
Q PN F++N + +G V C H ++LY M + P S+T++ ++KA + F
Sbjct: 830 QMQEPNVFVYNALFKGFVT--CSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRF 887
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G +L + + K GF V ++T L+ FYS G +R+ARKVFD++PE++ +WT ++ Y
Sbjct: 888 --GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY 945
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
R +L+M DSAN + MSE +N
Sbjct: 946 -------------RRVLDM----DSAN------------------SLANQMSE----KNE 966
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
L+N Y G++E+A +F+ M +D++ W+ MI+GY+ N REA+ +F++M +E
Sbjct: 967 ATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 1026
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ PD M V+SACA LG L++G F+ + +G+AL+D+Y+KCGS+
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 130/212 (61%), Gaps = 1/212 (0%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
L+ Y G+L A +F+ +P K++ SWT +I GYS++ EA+ +F ++E G+ PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
+ V+ ACA LG L G+ + Y ++G +V++G+ LV+MY+KCGS+E A VF
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFF 1091
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
+ ++++ CW+++I+G A++G +EAL++F +M+ E+++P+ V V +AC G +
Sbjct: 1092 NLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDE 1151
Query: 324 GNRA-KGLMDAEEFLSNPVLGTALIDLYAKCG 354
G R + ++D +SN ++ L++K G
Sbjct: 1152 GRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 1183
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 122/232 (52%), Gaps = 2/232 (0%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
GN + LF+Q + W TMI+G N + + I +++ M ++G P+ T + V
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
+ ACA L +G +H ++ GFV DV++ + L+ YSKCG L A VF ++P+KN+
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
W ++I G + G +EA+ +F + ++P++ V V AC G + GR I R
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRS 1158
Query: 230 M-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
M + + NV +V++++K G + EA + M E + V W A++ G
Sbjct: 1159 MIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ S ++ G+ L+F N F WN++I G+ + + ++++ M
Sbjct: 1066 DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLH-SLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+ P + TF V AC G ++ S++ V +V G++ +SK G +
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
Query: 155 RDARKVFDDIP-EKNVASWTALICG 178
+A ++ ++ E N W AL+ G
Sbjct: 1186 YEALELIGNMEFEPNAVIWGALLDG 1210
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 163/306 (53%), Gaps = 34/306 (11%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + + +P + WN +IRG ++ I +Y M + G P+ T+ F++
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFV------------------------------ 140
K+ +RL + LG +LH VVK+G D+F+
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 141 -ETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
+L Y+K G + AR VFD++ E++V +W+++I GY + G +A+++F ++ MG
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 200 L-RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
+ + +V V+ ACA LG L G+ + RY+ + L V + T+L++MYAKCGS+ +A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 259 RRVF--DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACA 316
VF + E D + W+A+I G AS+G RE+LQLF +M++ + PD + +L+AC+
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Query: 317 RLGALQ 322
G ++
Sbjct: 356 HGGLVK 361
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 131/270 (48%), Gaps = 36/270 (13%)
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGF--YSKCGHLRDARKVFDDIPEKNVASWTALICGYS 180
+ +H+L++ G + + L F S G + A K + + W +I G+S
Sbjct: 25 YKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFS 84
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
S E+++ ++ +L GL PD ++ + +RL + G + + +SGL ++F
Sbjct: 85 NSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLF 144
Query: 241 VGTTLVNMY-------------------------------AKCGSMEEARRVFDGMLERD 269
+ TL++MY AK G + AR VFD M ERD
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRA- 327
VV WS+MI GY G +AL++F +M + + + + MV V+ ACA LGAL G
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 328 KGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ ++D L+ +L T+LID+YAKCGS+G
Sbjct: 265 RYILDVHLPLT-VILQTSLIDMYAKCGSIG 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPES-FTFTFV 109
G+ +L+FD+ + W++MI G V ++ ++++ M + G + T V
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF--DDIPEK 167
+ ACA L + G T+H ++ V ++T L+ Y+KCG + DA VF + E
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+ W A+I G + G E++ LF + E + PD + +L AC+ G +
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ + ESG +V++ ++ G +++A M
Sbjct: 368 KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 2/300 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACAR 115
+ LFD+ +++ W M+ G V D + + LY M + P FT + + A A
Sbjct: 171 RKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAA 230
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
+ G +H +V+ G D + + L+ Y KCG + +AR +FD I EK+V SWT++
Sbjct: 231 VKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSM 290
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
I Y +S E LF L+ RP+ VL ACA L G+ + YM+ G
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
F ++LV+MY KCG++E A+ V DG + D+V W+++I G A NG P EAL+ F
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG-TALIDLYAKCG 354
+ K +PD V VLSAC G ++ G + + LS+ T L+DL A+ G
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSG 470
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 42/293 (14%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P + T+ +++ C++ G +H + +GFV + + LL Y+KCG L DARKV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGL--------------RPDSAN 206
FD++P +++ SW ++ GY+E GL EEA LF + E +P+ A
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 207 LVHVL-----------------------GACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
+++ L C R G+ I ++ +GL + + +
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR-----RGKEIHGHIVRAGLDSDEVLWS 257
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+L++MY KCG ++EAR +FD ++E+DVV W++MI Y + RE LF E+ RP
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + GVL+ACA L +LG + G M F ++L+D+Y KCG++
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 49/219 (22%)
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
++CG L EAV L L +P ++ +++ C++ L G+ + ++ SG
Sbjct: 63 VLCG---QKLLREAVQL----LGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 235 LHRNVFVGTTLVNMYAKCGSM-------------------------------EEARRVFD 263
+ + L+ MYAKCGS+ EEAR++FD
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK-ENLRPDCFAM-----VGVLSACAR 317
M E+D W+AM+ GY P EAL L+ MQ+ N RP+ F + C R
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G G+ + +D++E VL ++L+D+Y KCG +
Sbjct: 236 RGKEIHGHIVRAGLDSDE-----VLWSSLMDMYGKCGCI 269
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 153/307 (49%), Gaps = 8/307 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ LFD+ N +N++I G + ++L+ + + FT+ L C
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
C LG LH LVV G VF+ L+ YSKCG L A +FD E++ SW +LI
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA---RLGDLGSGRWIDRYMSES 233
GY G EE ++L + GL + L VL AC G + G I Y ++
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY-----ASNGLPRE 288
G+ ++ V T L++MYAK GS++EA ++F M ++VV ++AMI G+ ++ E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
A +LF +MQ+ L P VL AC+ L+ G + L+ F S+ +G+ALI+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401
Query: 349 LYAKCGS 355
LYA GS
Sbjct: 402 LYALMGS 408
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 8/306 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHD-----GIQLYHSMHQQGFFPESFTFTFVLKAC 113
LF + N +N MI G + D D +L+ M ++G P TF+ VLKAC
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
+ G +H+L+ K F D F+ + L+ Y+ G D + F ++++ASWT
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
++I + ++ E A DLFR L +RP+ + ++ ACA L SG I Y +S
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS 488
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
G+ V T+ ++MYAK G+M A +VF + DV +SAMI A +G EAL +F
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYA 351
M+ ++P+ A +GVL AC G + G + M ++ NP T L+DL
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMK-NDYRINPNEKHFTCLVDLLG 607
Query: 352 KCGSMG 357
+ G +
Sbjct: 608 RTGRLS 613
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 8/330 (2%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
Q +L+++++ G LFD+ + WN++I G V + + L M
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 95 HQQGFFPESFTFTFVLKACARLCH---FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC 151
H+ G ++ VLKAC + G +H K G D+ V T LL Y+K
Sbjct: 241 HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 152 GHLRDARKVFDDIPEKNVASWTALICGYSE-----SGLCEEAVDLFRGLLEMGLRPDSAN 206
G L++A K+F +P KNV ++ A+I G+ + EA LF + GL P +
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
VL AC+ L GR I + ++ + F+G+ L+ +YA GS E+ + F
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
++D+ W++MI + N A LF ++ ++RP+ + + ++SACA AL G +
Sbjct: 421 KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQ 480
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+G + + T+ I +YAK G+M
Sbjct: 481 IQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 136/262 (51%), Gaps = 11/262 (4%)
Query: 102 ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF 161
+S + + + A+ LG H ++K+ +++ LL Y KC L AR++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 162 DDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG 221
D +PE+N+ S+ +LI GY++ G E+A++LF E L+ D LG C DL
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
G + + +GL + VF+ L++MY+KCG +++A +FD ERD V W+++I GY
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD-------AE 334
G E L L +M ++ L +A+ VL AC L G KG+
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI--NLNEGFIEKGMAIHCYTAKLGM 283
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
EF + V+ TAL+D+YAK GS+
Sbjct: 284 EF--DIVVRTALLDMYAKNGSL 303
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 119/271 (43%), Gaps = 5/271 (1%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D ++ S ++ G+T F T + W +MI V N+ L+
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ PE +T + ++ ACA G + +K+G V+T + Y+K G+
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ A +VF ++ +VA+++A+I ++ G EA+++F + G++P+ + VL A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 214 CARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR-VFDGMLERDVV 271
C G + G ++ ++ ++ N T LV++ + G + +A + + V
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 272 CWSAMIQG---YASNGLPREALQLFFEMQKE 299
W A++ Y + + + + E++ E
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPE 660
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + N W +I G+V + +G+ + M + +++TF LKACA L
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H+ V+ GFV + V L Y++CG ++D +F+++ E++V SWT+LI
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G +AV+ F + + P+ + ACA L L G + + GL+ +
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ V +++ MY+ CG++ A +F GM RD++ WS +I GY G E + F M++
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+P FA+ +LS + ++ G + L N + ++LI++Y+KCGS+
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 159/321 (49%), Gaps = 14/321 (4%)
Query: 44 LRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH--QQGFFP 101
LRS + GN + +FD+ + + W ++I+ V + + + L+ +M P
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 102 ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF 161
++ + VLKAC + + G +LH+ VKT + V+V + LL Y + G + + +VF
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 162 DDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG 221
++P +N +WTA+I G +G +E + F + D+ L ACA L +
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
G+ I ++ G + V +L MY +CG M++ +F+ M ERDVV W+++I Y
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR------AKGLMDAEE 335
G +A++ F +M+ + P+ + SACA L L G + + GL D+
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS-- 344
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
LS + +++ +Y+ CG++
Sbjct: 345 -LS---VSNSMMKMYSTCGNL 361
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 125/266 (46%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF+ + W ++I ++ + M P TF + ACA L
Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G LH V+ G + V ++ YS CG+L A +F + +++ SW+ +I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y ++G EE F + + G +P L +L + + GR + GL +N
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V ++L+NMY+KCGS++EA +F D+V +AMI GYA +G +EA+ LF + K
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 299 ENLRPDCFAMVGVLSACARLGALQLG 324
RPD + VL+AC G L LG
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 125/287 (43%), Gaps = 36/287 (12%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN +LF + W+T+I G +G + + M Q G P F +L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ G +H+L + G + V + L+ YSKCG +++A +F + ++
Sbjct: 419 SVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIV 478
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG--DLG------- 221
S TA+I GY+E G +EA+DLF L++G RPDS + VL AC G DLG
Sbjct: 479 SLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMM 538
Query: 222 ----------------------SGRWID--RYMSESGLHRNVFVGTTLVNMYAKCGSMEE 257
+GR D + ++E ++ V TTL+ G +E
Sbjct: 539 QETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIER 598
Query: 258 ARRVFDGMLERDVVCWSAMI---QGYASNGLPREALQLFFEMQKENL 301
RR + +LE D C +A++ Y+S G EA + M+ + +
Sbjct: 599 GRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 144/270 (53%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
N + +WN+M+ G + N+ + L ++Q +S+T + LK C + LG
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+HSLVV +G+ D V + L+ ++ G+++DA K+F +P K++ +++ LI G +SG
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
A LFR L+++GL D + ++L C+ L LG G+ I + G T
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
LV+MY KCG ++ +FDGMLERDVV W+ +I G+ NG EA + F +M + P+
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+G+LSAC G L+ M +E
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSE 573
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 144/301 (47%), Gaps = 4/301 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + PN WN +I G VD ++ M ++G + F LKAC+
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD---IPEKNVASWTAL 175
+G LH VVK+G F + L+ YS CG L A VF +VA W ++
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ G+ + E A+ L + + L DS L L C +L G + + SG
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ VG+ LV+++A G++++A ++F + +D++ +S +I+G +G A LF E
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
+ K L D F + +L C+ L +L G + GL + + S PV TAL+D+Y KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 356 M 356
+
Sbjct: 494 I 494
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 37/281 (13%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L+ C ++ F G ++ + V+K G +VF+ ++ Y L DA KVFD++ E+N+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN---LVHVLGACARLGDLGSGRWI 226
+WT ++ GY+ G +A++L+R +L+ ++AN VL AC +GD+ G +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDS--EEEAANEFMYSAVLKACGLVGDIQLGILV 129
Query: 227 DRYMSESGLHRNVFVGTTLVNMYA-------------------------------KCGSM 255
+ + L +V + ++V+MY K G M
Sbjct: 130 YERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLM 189
Query: 256 EEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
+EA +F M + +VV W+ +I G+ G PR AL+ MQ+E L D FA+ L AC
Sbjct: 190 DEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKAC 248
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ G L +G + + S+P +ALID+Y+ CGS+
Sbjct: 249 SFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 144/333 (43%), Gaps = 36/333 (10%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFVLKACARLC 117
+FD+ N W TM+ G + + I+LY M + F ++ VLKAC +
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVG 121
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI------------- 164
LG ++ + K GDV + ++ Y K G L +A F +I
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 165 ------------------PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
P+ NV SW LI G+ + G A++ + GL D
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFA 240
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG-- 264
L L AC+ G L G+ + + +SGL + F + L++MY+ CGS+ A VF
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 265 -MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
+ V W++M+ G+ N AL L ++ + +L D + + G L C L+L
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G + L+ + + ++G+ L+DL+A G++
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNI 393
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 3/247 (1%)
Query: 34 HQDNYLV-SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYH 92
++ +Y+V S+++ + GN LF + N + ++ +IRG V + L+
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
+ + G + F + +LK C+ L G +H L +K G+ + T L+ Y KCG
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ + +FD + E++V SWT +I G+ ++G EEA F ++ +G+ P+ + +L
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 213 ACARLGDLGSGR-WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDV 270
AC G L R ++ SE GL + +V++ + G +EA + + M LE D
Sbjct: 553 ACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDK 612
Query: 271 VCWSAMI 277
W++++
Sbjct: 613 TIWTSLL 619
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 66/332 (19%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + N F+ N +IRG+ +N F ++ + M + G P+ TF FVLK+ ++L
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD--------------- 163
LG LH+ +K D FV L+ Y+K G L+ A +VF++
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 164 --------------------IPEKNVASWTALICGY------------------------ 179
+PE+N SW+ LI GY
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 180 -------SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE 232
S++G E A+ + +LE GL+P+ + VL AC++ G LGSG I Y+ +
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
+G+ + +GT LV+MYAKCG ++ A VF M +D++ W+AMIQG+A +G +A+Q
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 293 FFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
F +M +PD + VL+AC + LG
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG 413
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 10/245 (4%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF 100
S +++ G + K LF+ N W T+I G + I Y M ++G
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P +T VL AC++ G +H ++ G D + T L+ Y+KCG L A V
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
F ++ K++ SWTA+I G++ G +A+ FR ++ G +PD + VL AC ++
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 221 GSG-RWIDR----YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWS 274
G + D Y E L V V V++ + G + EA + + M + D+ W+
Sbjct: 411 DLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 275 AMIQG 279
A+ +
Sbjct: 467 ALYRA 471
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 187/399 (46%), Gaps = 54/399 (13%)
Query: 6 KNLLMQGLKS-------FNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHP-- 56
K LL+ L S NQ+K H Q Y+++ ++R+ G P
Sbjct: 45 KELLVSSLISKLDDCINLNQIKQIHGHVLRKGL--DQSCYILTKLIRTLTKLGVPMDPYA 102
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ + + N FLW +IRG F + I +Y M ++ P SFTF+ +LKAC +
Sbjct: 103 RRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTM 162
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+LG H+ + V+V ++ Y KC + ARKVFD++PE++V SWT LI
Sbjct: 163 KDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELI 222
Query: 177 CGYSESGLCEEAVDLFRGLL-------------------------------EMGLRPDSA 205
Y+ G E A +LF L + G+R D
Sbjct: 223 AAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEV 282
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMS---ESGLHRN--VFVGTTLVNMYAKCGSMEEARR 260
+ + ACA+LG + ++ DR + +SG + V +G+ L++MY+KCG++EEA
Sbjct: 283 TVAGYISACAQLG---ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 339
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLF-FEMQKENLRPDCFAMVGVLSACARLG 319
VF M ++V +S+MI G A++G +EAL LF + + + ++P+ VG L AC+ G
Sbjct: 340 VFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSG 399
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
+ G + M + F P T ++DL + G +
Sbjct: 400 LVDQGRQVFDSM-YQTFGVQPTRDHYTCMVDLLGRTGRL 437
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 150/306 (49%), Gaps = 33/306 (10%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
+ + FD+ + WN M+ G N D ++L++ M + G P T+ V+ AC
Sbjct: 215 ENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC---------------------- 151
+ L +L L+ + + FV+T LL ++KC
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTW 334
Query: 152 ----------GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-L 200
G + AR++FD +P++NV SW +LI GY+ +G A++ F +++ G
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDS 394
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
+PD ++ VL AC + DL G I Y+ ++ + N +L+ MYA+ G++ EA+R
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
VFD M ERDVV ++ + +A+NG E L L +M+ E + PD VL+AC R G
Sbjct: 455 VFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Query: 321 LQLGNR 326
L+ G R
Sbjct: 515 LKEGQR 520
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 172/399 (43%), Gaps = 100/399 (25%)
Query: 53 THHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKA 112
+++ +L+FD PN F+ N+M + D +D ++LY + G P++F+F V+K+
Sbjct: 56 SYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKS 115
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI-------- 164
R G +LV K GF D +V ++ Y K + ARKVFD I
Sbjct: 116 AGRF-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 165 -----------------------PEKNVASWT---------------------------- 173
PE +V SWT
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVV 230
Query: 174 ---ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
A++ GY+++G E+A+ LF +L +G+RP+ V V+ AC+ D R + + +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREA 289
E + N FV T L++M+AKC ++ ARR+F+ + +R++V W+AMI GY G A
Sbjct: 291 DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSA 350
Query: 290 LQLFFEMQKENL--------------------------------RPDCFAMVGVLSACAR 317
QLF M K N+ +PD M+ VLSAC
Sbjct: 351 RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ L+LG+ + + N +LI +YA+ G++
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG-FFPESFTFT 107
G+ + LFD N WN++I G N I+ + M G P+ T
Sbjct: 343 RIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI 402
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
VL AC + LG + + K + L+ Y++ G+L +A++VFD++ E+
Sbjct: 403 SVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER 462
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
+V S+ L ++ +G E ++L + + G+ PD VL AC R G L G+ I
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 156/308 (50%), Gaps = 1/308 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + L+F Q + WN+++ V++ D + L SM G TFT L
Sbjct: 293 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 352
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC F G LH LVV +G + + L+ Y K G + ++R+V +P ++V
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVV 412
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL-GSGRWIDRY 229
+W ALI GY+E ++A+ F+ + G+ + +V VL AC GDL G+ + Y
Sbjct: 413 AWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAY 472
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ +G + V +L+ MYAKCG + ++ +F+G+ R+++ W+AM+ A +G E
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEV 532
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L+L +M+ + D F+ LSA A+L L+ G + GL F + + A D+
Sbjct: 533 LKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADM 592
Query: 350 YAKCGSMG 357
Y+KCG +G
Sbjct: 593 YSKCGEIG 600
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 153/289 (52%), Gaps = 1/289 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL-CHFHLGHTL 125
N WNTM+ G+V + +G++ + M G P SF ++ AC R F G +
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H V K+G + DV+V T +L Y G + +RKVF+++P++NV SWT+L+ GYS+ G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
EE +D+++G+ G+ + ++ V+ +C L D GR I + +SGL + V +L
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 184
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
++M G+++ A +FD M ERD + W+++ YA NG E+ ++F M++ + +
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ +LS + + G GL+ F S + L+ +YA G
Sbjct: 245 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 151/322 (46%), Gaps = 5/322 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+N L+S++ GN + +FDQ +T WN++ N + +++ M
Sbjct: 181 ENSLISML----GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ S T + +L + H G +H LVVK GF V V LL Y+ G
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+A VF +P K++ SW +L+ + G +A+ L ++ G + L AC
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
GR + + SGL N +G LV+MY K G M E+RRV M RDVV W+A
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA-LQLGNRAKGLMDAE 334
+I GYA + P +AL F M+ E + + +V VLSAC G L+ G + +
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
F S+ + +LI +YAKCG +
Sbjct: 477 GFESDEHVKNSLITMYAKCGDL 498
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
D Y+ + +L +G + +F++ + N W +++ G D + I +Y M
Sbjct: 75 SDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM 134
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
+G + + V+ +C L LG + VVK+G + VE L+ G++
Sbjct: 135 RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 194
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
A +FD + E++ SW ++ Y+++G EE+ +F + +S + +L
Sbjct: 195 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 254
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
+ GR I + + G V V TL+ MYA G EA VF M +D++ W+
Sbjct: 255 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 314
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+++ + ++G +AL L M + L+AC + G GL+
Sbjct: 315 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 374
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
N ++G AL+ +Y K G M
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEM 396
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 140/324 (43%), Gaps = 8/324 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LVS+ + G + + Q + WN +I G +++ + + +M
Sbjct: 384 NALVSMYGK----IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 439
Query: 97 QGFFPESFTFTFVLKACARLCHF-HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+G T VL AC G LH+ +V GF D V+ L+ Y+KCG L
Sbjct: 440 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 499
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
++ +F+ + +N+ +W A++ + G EE + L + G+ D + L A A
Sbjct: 500 SSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAA 559
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+L L G+ + + G + F+ +MY+KCG + E ++ + R + W+
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 619
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
+I +G E F EM + ++P V +L+AC+ G + G A M A +
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG-LAYYDMIARD 678
Query: 336 FLSNPVLG--TALIDLYAKCGSMG 357
F P + +IDL + G +
Sbjct: 679 FGLEPAIEHCICVIDLLGRSGRLA 702
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 107/195 (54%), Gaps = 4/195 (2%)
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL-GS 222
+P +N SW ++ G GL E ++ FR + ++G++P S + ++ AC R G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G + ++++SGL +V+V T ++++Y G + +R+VF+ M +R+VV W++++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
G P E + ++ M+ E + + +M V+S+C L LG + G + S +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 343 GTALIDLYAKCGSMG 357
+LI + GSMG
Sbjct: 181 ENSLISM---LGSMG 192
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 18/289 (6%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H N L+++ + G+ + LF+ N N WN M+ + + ++L
Sbjct: 483 HVKNSLITMYAKC----GDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M G + F+F+ L A A+L G LH L VK GF D F+ YSKCG
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ + K+ +++ SW LI G EE F +LEMG++P V +L A
Sbjct: 599 IGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTA 658
Query: 214 CARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVV 271
C+ G + G + D + GL + ++++ + G + EA M ++ + +
Sbjct: 659 CSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL 718
Query: 272 CWSAM-----IQGYASNGLPREALQLFFEMQKEN-----LRPDCFAMVG 310
W ++ I G G R+A + +++ E+ L + FA G
Sbjct: 719 VWRSLLASCKIHGNLDRG--RKAAENLSKLEPEDDSVYVLSSNMFATTG 765
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 146/295 (49%), Gaps = 5/295 (1%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHN-PNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D Y+ S ++ S F + + +FD+ + ++ LWN ++ G F D + ++
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M ++G T T VL A G ++H L VKTG D+ V L+ Y K
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L +A +F+ + E+++ +W +++C + G + + LF +L G+RPD L VL
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 214 CARLGDLGSGRWIDRYMSESGL----HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
C RL L GR I YM SGL N F+ +L++MY KCG + +AR VFD M +D
Sbjct: 373 CGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKD 432
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
W+ MI GY AL +F M + ++PD VG+L AC+ G L G
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEG 487
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 149/295 (50%), Gaps = 6/295 (2%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ F +N +I G V N D ++ Y M G P+ +TF +LK + +H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVH 183
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS-WTALICGYSESGLC 185
L K GF D +V +GL+ YSK + DA+KVFD++P+++ + W AL+ GYS+
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
E+A+ +F + E G+ + VL A GD+ +GR I ++G ++ V L
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
++MY K +EEA +F+ M ERD+ W++++ + G L LF M +RPD
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFL----SNPVLGTALIDLYAKCGSM 356
+ VL C RL +L+ G G M L SN + +L+D+Y KCG +
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 126/246 (51%), Gaps = 4/246 (1%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDV-FVETGLLGFYSKCGHLRDARKVFDDIPEK 167
L+ CA+ + G +H +V+ GF+ D T L+ Y+KCG +R A VF E+
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+V + ALI G+ +G +A++ +R + G+ PD +L + +L + +
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVH 183
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLP 286
+ G + +VG+ LV Y+K S+E+A++VFD + +R D V W+A++ GY+
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
+AL +F +M++E + + VLSA G + G GL S+ V+ AL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 347 IDLYAK 352
ID+Y K
Sbjct: 304 IDMYGK 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESG-LHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
A + L CA+ D SG+ I +M G L + GT+LVNMYAKCG M A VF
Sbjct: 61 ATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
G ERDV ++A+I G+ NG P +A++ + EM+ + PD + +L A++L
Sbjct: 121 GS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGS---DAMEL 176
Query: 324 GNRAK--GLMDAEEFLSNPVLGTALIDLYAK 352
+ K GL F S+ +G+ L+ Y+K
Sbjct: 177 SDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 45/362 (12%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLL--FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
DN+L S ++ SF+ + L FD+ N F +N ++ + + D L+ S
Sbjct: 56 DNFLASKLI--SFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLS 113
Query: 94 MHQQGFF------PESFTFTFVLKACARLCHFHLG---HTLHSLVVKTGFVGDVFVETGL 144
+ P+S + + VLKA + F LG +H V++ GF DVFV G+
Sbjct: 114 WIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGM 173
Query: 145 LGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPD 203
+ +Y+KC ++ ARKVFD++ E++V SW ++I GYS+SG E+ +++ +L +P+
Sbjct: 174 ITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
++ V AC + DL G + + M E+ + ++ + ++ YAKCGS++ AR +FD
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFD 293
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL---------------------- 301
M E+D V + A+I GY ++GL +EA+ LF EM+ L
Sbjct: 294 EMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS 353
Query: 302 ---------RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
RP+ + +L + L+ G +N + T++ID YAK
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 353 CG 354
G
Sbjct: 414 LG 415
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVL 110
N + +FD+ + WN+MI G + F D ++Y +M F P T V
Sbjct: 182 NIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+AC + G +H +++ D+ + ++GFY+KCG L AR +FD++ EK+
Sbjct: 242 QACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV 301
Query: 171 SWTALICGYSESGLCEEAVDLF-------------------------------RGLLEMG 199
++ A+I GY GL +EA+ LF R ++ G
Sbjct: 302 TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCG 361
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
RP++ L +L + +L G+ I + +G N++V T++++ YAK G + A+
Sbjct: 362 SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQ 421
Query: 260 RVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
RVFD +R ++ W+A+I YA +G A LF +MQ +PD + VLSA A G
Sbjct: 422 RVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 10/242 (4%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
LH+ +V D F+ + L+ FY++ R A VFD+I +N S+ AL+ Y+ +
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 185 CEEAVDLFRGLL------EMGLRPDSANLVHVLGACARLGD--LGS-GRWIDRYMSESGL 235
+A LF + RPDS ++ VL A + D LGS R + ++ G
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+VFVG ++ Y KC ++E AR+VFD M ERDVV W++MI GY+ +G + +++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 296 MQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M + +P+ ++ V AC + L G M + L A+I YAKCG
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 355 SM 356
S+
Sbjct: 284 SL 285
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + + WN MI G++ N+ + I + M + G P + T + +L + +
Sbjct: 322 LFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN 381
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H+ ++ G +++V T ++ Y+K G L A++VFD+ ++++ +WTA+I
Sbjct: 382 LKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITA 441
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI-DRYMSESGLHR 237
Y+ G + A LF + +G +PD L VL A A GD + I D +++ +
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP 501
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG---LPREALQLF 293
V +V++ ++ G + +A M ++ W A++ G + G + R A
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRL 561
Query: 294 FEMQKEN 300
FEM+ EN
Sbjct: 562 FEMEPEN 568
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 142/270 (52%), Gaps = 2/270 (0%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ LFD+ N WN I V + + I+ + + P S TF L AC+
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
H +LG LH LV+++GF DV V GL+ FY KC +R + +F ++ KN SW +L+
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y ++ E+A L+ + + + VL ACA + L GR I + ++ +
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
R +FVG+ LV+MY KCG +E++ + FD M E+++V +++I GYA G AL LF EM
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 297 QKENL--RPDCFAMVGVLSACARLGALQLG 324
P+ V +LSAC+R GA++ G
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 145/321 (45%), Gaps = 10/321 (3%)
Query: 37 NYLVSLVLRSSFHFGNTHHP---KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
NYL+++ + HP +L+ T N W ++I G+ N F + +
Sbjct: 46 NYLINM-------YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE 98
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M ++G P FTF KA A L G +H+L VK G + DVFV Y K
Sbjct: 99 MRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRL 158
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
DARK+FD+IPE+N+ +W A I G EA++ F + P+S L A
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C+ L G + + SG +V V L++ Y KC + + +F M ++ V W
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSW 278
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+++ Y N +A L+ +K+ + F + VLSACA + L+LG
Sbjct: 279 CSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK 338
Query: 334 EEFLSNPVLGTALIDLYAKCG 354
+G+AL+D+Y KCG
Sbjct: 339 ACVERTIFVGSALVDMYGKCG 359
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 1/250 (0%)
Query: 108 FVLKACARLCHFHLGHTLHSLVVKT-GFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
+LK LG +H+ +VKT F+ L+ YSK H AR V P
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
+NV SWT+LI G +++G A+ F + G+ P+ A A L +G+ I
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
+ G +VFVG + +MY K ++AR++FD + ER++ W+A I ++G P
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
REA++ F E ++ + P+ L+AC+ L LG + GL+ F ++ + L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 347 IDLYAKCGSM 356
ID Y KC +
Sbjct: 251 IDFYGKCKQI 260
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+++F + N W +++ V N LY + F + VL ACA +
Sbjct: 264 EIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGM 323
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG ++H+ VK +FV + L+ Y KCG + D+ + FD++PEKN+ + +LI
Sbjct: 324 AGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 177 CGYSESGLCEEAVDLFRGLLEMGL--RPDSANLVHVLGACARLGDLGSGRWI-DRYMSES 233
GY+ G + A+ LF + G P+ V +L AC+R G + +G I D S
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREAL 290
G+ + +V+M + G +E A M ++ + W A+ +G P+ L
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 9/304 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFFPESFTFTFVLKACARLC 117
+F Q + + +WN ++ G+ C + ++ + +MH P S TF VL C RL
Sbjct: 78 MFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL-RDARKVFDDIPEKNVASWTALI 176
+ G ++HS ++K G D V L+ Y+K G + DA FD I +K+V SW A+I
Sbjct: 137 DSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAII 196
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD---LGSGRWIDRYMSE- 232
G+SE+ + +A F +L+ P+ A + +VL CA + SGR I Y+ +
Sbjct: 197 AGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQR 256
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
S L +VFV +LV+ Y + G +EEA +F M +D+V W+ +I GYASN +A QL
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 293 FFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKG-LMDAEEFLSNPVLGTALIDLY 350
F + K ++ PD ++ +L CA+L L G ++ L + +G ALI Y
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
Query: 351 AKCG 354
A+ G
Sbjct: 377 ARFG 380
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 20/333 (6%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LVS+ + F F + + FD + + WN +I G +N+ D + + M +
Sbjct: 161 NALVSMYAKFGFIFPDAYTA---FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 97 QGFFPESFTFTFVLKACARL---CHFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCG 152
+ P T VL CA + G +HS VV+ ++ VFV L+ FY + G
Sbjct: 218 EPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVL 211
+ +A +F + K++ SW +I GY+ + +A LF L+ G + PDS ++ +L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISIL 337
Query: 212 GACARLGDLGSGRWIDRY-MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
CA+L DL SG+ I Y + S L + VG L++ YA+ G A F M +D+
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDI 397
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG- 329
+ W+A++ +A + + L L + E + D ++ +L C + + G
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGY 457
Query: 330 ------LMDAEEFLSNPVLGTALIDLYAKCGSM 356
L D EE P LG AL+D YAKCG++
Sbjct: 458 SVKAGLLHDEEE----PKLGNALLDAYAKCGNV 486
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 42/357 (11%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-H 95
N LVS LR G LF + + + WN +I G N + QL+H++ H
Sbjct: 267 NSLVSFYLR----VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV-GDVFVETGLLGFYSKCGHL 154
+ P+S T +L CA+L G +HS +++ ++ D V L+ FY++ G
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
A F + K++ SW A++ +++S + ++L LL + DS ++ +L C
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 215 ARLGDLGSGRWIDRYMSESGL---HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER--- 268
+ +G + + Y ++GL +G L++ YAKCG++E A ++F G+ ER
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 269 -----------------------------DVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
D+ WS M++ YA + P EA+ +F E+Q
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR 562
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+RP+ ++ +L CA+L +L L + G + L + L L+D+YAKCGS+
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI-IRGGLGDIRLKGTLLDVYAKCGSL 618
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 9/267 (3%)
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
GF + F V+KACA + G LH V K G + V +L Y+KC + D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLC-EEAVDLFRGL-LEMGLRPDSANLVHVLGAC 214
+K+F + + W ++ G S S C E + F+ + +P S VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGLSVS--CGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSM-EEARRVFDGMLERDVVCW 273
RLGD +G+ + Y+ ++GL ++ VG LV+MYAK G + +A FDG+ ++DVV W
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG---ALQLGNRAKGL 330
+A+I G++ N + +A + F M KE P+ + VL CA + A + G +
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 331 MDAEEFLSNPV-LGTALIDLYAKCGSM 356
+ +L V + +L+ Y + G +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 149/323 (46%), Gaps = 40/323 (12%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S R FG+T F + WN ++ D+ + L H +
Sbjct: 370 NALISFYAR----FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGD---VFVETGLLGFYSKCGH 153
+ +S T +LK C + +H VK G + D + LL Y+KCG+
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 154 LRDARKVFDDIPEK--------------------------------NVASWTALICGYSE 181
+ A K+F + E+ ++ +W+ ++ Y+E
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
S EA+ +FR + G+RP++ ++++L CA+L L R Y+ GL ++ +
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRL 604
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
TL+++YAKCGS++ A VF RD+V ++AM+ GYA +G +EAL ++ M + N+
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 302 RPDCFAMVGVLSACARLGALQLG 324
+PD + +L+AC G +Q G
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDG 687
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 114/231 (49%), Gaps = 3/231 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ ++LF + + W+ M+R ++ C ++ I ++ + +G P + T +L
Sbjct: 516 GSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLL 575
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CA+L HL H +++ G +GD+ ++ LL Y+KCG L+ A VF +++
Sbjct: 576 PVCAQLASLHLVRQCHGYIIRGG-LGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV 634
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI-DRY 229
+TA++ GY+ G +EA+ ++ + E ++PD + +L AC G + G I D
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ G+ + V++ A+ G +++A M +E + W +++
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRA 745
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 161/304 (52%), Gaps = 14/304 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+T N WN+++ G V N + + ++++H M Q+ + T +L+ C
Sbjct: 284 VFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQ 343
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
++H ++++ G+ + + L+ Y+ C + DA V D + K+V S + +I G
Sbjct: 344 PLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISG 403
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ +G +EA+ +F M P++ ++ +L AC+ DL + +W L N
Sbjct: 404 LAHAGRSDEAISIF---CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 239 -VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ VGT++V+ YAKCG++E ARR FD + E++++ W+ +I YA NGLP +AL LF EM+
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS---NPVLG--TALIDLYAK 352
++ P+ + LSAC G ++ KGLM + + P L + ++D+ ++
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVK-----KGLMIFKSMVEEDHKPSLQHYSCIVDMLSR 575
Query: 353 CGSM 356
G +
Sbjct: 576 AGEI 579
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
FD ++ ++ WN ++ G++D +G+ + + GF P + T V+ AC L +
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--W 141
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G +H V+++GF G V+ +L Y+ L ARK+FD++ E++V SW+ +I Y
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSY 200
Query: 180 SESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH-R 237
+S + LF+ ++ E PD + VL AC + D+ GR + + G
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+VFV +L++MY+K ++ A RVFD R++V W++++ G+ N EAL++F M
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+E + D +V +L C G++ + SN V ++LID Y C
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS 377
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 25/265 (9%)
Query: 91 YHSMHQQGF-FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
Y + + G F + F F V KACA+L G+++ FY
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIAD-------------------FYM 72
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
KCG L + FD + ++ SW ++ G + G EE + F L G P+++ LV
Sbjct: 73 KCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVL 132
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
V+ AC L G I Y+ SG V +++ MYA S+ AR++FD M ERD
Sbjct: 133 VIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERD 189
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAK 328
V+ WS +I+ Y + P L+LF EM E PDC + VL AC + + +G
Sbjct: 190 VISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVH 249
Query: 329 GLMDAEEF-LSNPVLGTALIDLYAK 352
G F L++ + +LID+Y+K
Sbjct: 250 GFSIRRGFDLADVFVCNSLIDMYSK 274
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 9/213 (4%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVK 131
+TMI G+ + I ++ M P + T +L AC+ H + ++
Sbjct: 398 STMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIR 454
Query: 132 TGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ D+ V T ++ Y+KCG + AR+ FD I EKN+ SWT +I Y+ +GL ++A+
Sbjct: 455 RSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALA 514
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
LF + + G P++ + L AC G + G I + M E ++ + +V+M +
Sbjct: 515 LFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLS 574
Query: 251 KCGSMEEARRVFDGMLERDV----VCWSAMIQG 279
+ G ++ A + + E DV W A++ G
Sbjct: 575 RAGEIDTAVELIKNLPE-DVKAGASAWGAILSG 606
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 33/314 (10%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
++R+ + + +FD+ N + N MIR V+N + +G++++ +M P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
+TF VLKAC+ +G +H K G +FV GL+ Y KCG L +AR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
++ ++V SW +L+ GY+++ ++A+++ R + + + D+ + +L A +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT----- 254
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
TT MY K +F M ++ +V W+ MI Y
Sbjct: 255 --------------------TTENVMYVK--------DMFFKMGKKSLVSWNVMIGVYMK 286
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
N +P EA++L+ M+ + PD ++ VL AC AL LG + G ++ ++ + N +L
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 343 GTALIDLYAKCGSM 356
ALID+YAKCG +
Sbjct: 347 ENALIDMYAKCGCL 360
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 36/302 (11%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+L+ D+ + WN+++ G N F D +++ M ++ T +L A +
Sbjct: 195 RLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-- 252
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
++ +V D+F + G +K++ SW +I
Sbjct: 253 ---------NTTTENVMYVKDMFFKMG----------------------KKSLVSWNVMI 281
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y ++ + EAV+L+ + G PD+ ++ VL AC L G+ I Y+ L
Sbjct: 282 GVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLI 341
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N+ + L++MYAKCG +E+AR VF+ M RDVV W+AMI Y +G +A+ LF ++
Sbjct: 342 PNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL 401
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
Q L PD A V L+AC+ G L+ G LM + + P L ++DL + G
Sbjct: 402 QDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM-TDHYKITPRLEHLACMVDLLGRAG 460
Query: 355 SM 356
+
Sbjct: 461 KV 462
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N + K +F + + WN MI + N + ++LY M GF P++ + T VL
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
AC LG +H + + + ++ +E L+ Y+KCG L AR VF+++ ++V S
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
WTA+I Y SG +AV LF L + GL PDS V L AC+ G L GR + M+
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 232 ESGLHRNVFVG----TTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
+ H + +V++ + G ++EA R M +E + W A++
Sbjct: 438 D---HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 101/194 (52%)
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSES 182
T+HS ++ + + L+ Y+ + ARKVFD+IPE+NV +I Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
G E V +F + +RPD VL AC+ G + GR I ++ GL +FVG
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
LV+MY KCG + EAR V D M RDVV W++++ GYA N +AL++ EM+ +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 303 PDCFAMVGVLSACA 316
D M +L A +
Sbjct: 239 HDAGTMASLLPAVS 252
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQ 278
D+ + R + + L N +G L+ YA + AR+VFD + ER+V+ + MI+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
Y +NG E +++F M N+RPD + VL AC+ G + +G + G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 339 NPVLGTALIDLYAKCG 354
+G L+ +Y KCG
Sbjct: 174 TLFVGNGLVSMYGKCG 189
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 168/340 (49%), Gaps = 36/340 (10%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N + + LFD N TFL+N +I+ + H+ I LY+ + G P TF F+
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI------- 164
A A LHS ++GF D F T L+ Y+K G L AR+VFD++
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 165 ------------------------PEKNVASWTALICGYSESGLCEEAVDLFRGL-LEMG 199
P KNV SWT +I G+S++G EA+ +F + +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
++P+ +V VL ACA LG+L GR ++ Y E+G N++V + MY+KCG ++ A+
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 260 RVFDGM-LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARL 318
R+F+ + +R++ W++MI A++G EAL LF +M +E +PD VG+L AC
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
G + G M+ +S P L +IDL + G +
Sbjct: 331 GMVVKGQELFKSMEEVHKIS-PKLEHYGCMIDLLGRVGKL 369
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 33/331 (9%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+++FD + WNTM+ G + H+ + Y + G F+F +L AC +
Sbjct: 133 RVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS 192
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI------------ 164
L H V+ GF+ +V + ++ Y+KCG + A++ FD++
Sbjct: 193 RQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 165 -------------------PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
PEKN SWTALI GY G A+DLFR ++ +G++P+
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
L A A + L G+ I YM + + N V ++L++MY+K GS+E + RVF
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 266 LER-DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
++ D V W+ MI A +GL +AL++ +M K ++P+ +V +L+AC+ G ++ G
Sbjct: 373 DDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432
Query: 325 NRAKGLMDAEE-FLSNPVLGTALIDLYAKCG 354
R M + + + LIDL + G
Sbjct: 433 LRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 140/334 (41%), Gaps = 63/334 (18%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV-GDVFVETGL 144
+ S+ QQG +L+ C G +H + TGF + + L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 145 LGFYSKCG------------HLRD-------------------ARKVFDDIPEKNVASWT 173
+G Y KCG HLR+ AR VFD +PE++V SW
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
++ GY++ G EA+ ++ G++ + + +L AC + L R + +
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
G NV + ++++ YAKCG ME A+R FD M +D+ W+ +I GYA G A +LF
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 294 FEMQKEN-------------------------------LRPDCFAMVGVLSACARLGALQ 322
EM ++N ++P+ F L A A + +L+
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G G M N ++ ++LID+Y+K GS+
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 10/303 (3%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D ++ + ++ G+ + LF + N W +I G V + + L+ M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
G PE FTF+ L A A + G +H +++T + V + L+ YSK G L
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 155 RDARKVFDDIPEK-NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ +VF +K + W +I ++ GL +A+ + +++ ++P+ LV +L A
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 214 CARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVV 271
C+ G + G RW + + G+ + L+++ + G +E R + M E D
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKH 482
Query: 272 CWSAMI---QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
W+A++ + + + L ++A ++ E+ P + + S A G +L + +
Sbjct: 483 IWNAILGVCRIHGNEELGKKAADELIKLDPESSAP----YILLSSIYADHGKWELVEKLR 538
Query: 329 GLM 331
G+M
Sbjct: 539 GVM 541
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 170/357 (47%), Gaps = 34/357 (9%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H N L++ + N+ + +F NPN ++N MI+ + + + S
Sbjct: 33 HGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSS 92
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M +G + + +T+ +LK+C+ L G +H +++TGF + G++ Y+ G
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 154 LRDARKVFDDIPEKNVA-------------------------------SWTALICGYSES 182
+ DA+KVFD++ E+NV SW ++I S+
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN-VFV 241
G EA++LF +++ G PD A +V VL A LG L +G+WI SGL ++ + V
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE-N 300
G LV+ Y K G +E A +F M R+VV W+ +I G A NG + LF M +E
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 301 LRPDCFAMVGVLSACARLGALQLGNRAKGL-MDAEEFLSNPVLGTALIDLYAKCGSM 356
+ P+ +GVL+ C+ G ++ G GL M+ + + A++DL ++ G +
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 245 LVNMYAKCGSMEE---ARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
L + + CGS+ A RVF + +V+ ++AMI+ Y+ G P E+L F M+ +
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
D + +L +C+ L L+ G G + F + +++LY G MG
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG 154
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
L + ++ S F G + LFD+ + + W MI G ++ + +H M +QG
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P FT + VLK+C + G +H +VVK G G ++V+ ++ Y+ C +A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 159 -KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
+F DI KN +WT LI G++ G + +++ +L + + A A +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
+ +G+ I + + G N+ V +++++Y +CG + EA+ F M ++D++ W+ +I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
+ EAL +F + + P+C+ +++ACA + AL G + G + F
Sbjct: 287 SELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 338 SNPVLGTALIDLYAKCGSM 356
N L ALID+YAKCG++
Sbjct: 346 KNVELANALIDMYAKCGNI 364
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 158/303 (52%), Gaps = 5/303 (1%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
L+F N W T+I G G+++Y M + + T ++A A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
G +H+ V+K GF ++ V +L Y +CG+L +A+ F ++ +K++ +W LI
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
S EA+ +F+ G P+ ++ ACA + L G+ + + G ++
Sbjct: 288 ELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLPREALQLFFEM 296
NV + L++MYAKCG++ +++RVF +++R ++V W++M+ GY S+G EA++LF +M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNP--VLGTALIDLYAKCG 354
+RPD + VLSAC G ++ G + +M++ E+ NP + ++DL + G
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMES-EYGINPDRDIYNCVVDLLGRAG 465
Query: 355 SMG 357
+G
Sbjct: 466 KIG 468
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 134/256 (52%), Gaps = 8/256 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G K F + + + WNT+I + +D + + ++ QGF P +TFT ++
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLV 320
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE-KNV 169
ACA + + G LH + + GF +V + L+ Y+KCG++ D+++VF +I + +N+
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNL 380
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDR 228
SWT+++ GY G EAV+LF ++ G+RPD + VL AC G + G ++ +
Sbjct: 381 VSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNV 440
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI---QGYASNG 284
SE G++ + + +V++ + G + EA + + M + D W A++ + + NG
Sbjct: 441 MESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNG 500
Query: 285 L-PREALQLFFEMQKE 299
L R A + E++ +
Sbjct: 501 LISRLAARKVMELKPK 516
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 40/295 (13%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ F W MI G++ N + + ++ M G P + T + AC+ L + G +H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
S+ VK GF+ DV V L+ YSKCG L DARKVFD + K+V +W ++I GY ++G C
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
+A +LF + + LRP N+ T++
Sbjct: 436 KAYELFTRMQDANLRP-----------------------------------NIITWNTMI 460
Query: 247 NMYAKCGSMEEARRVF-----DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
+ Y K G EA +F DG ++R+ W+ +I GY NG EAL+LF +MQ
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
P+ ++ +L ACA L ++ G + + + AL D YAK G +
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 137/256 (53%), Gaps = 11/256 (4%)
Query: 55 HPK-----LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
HPK L F + PN + + + N + + S+ QQG + T+ +
Sbjct: 29 HPKSRKKNLSFTKKKEPN-IIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKL 87
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVG--DVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
L++C HLG LH+ + G DVFVET LL Y+KCG + DARKVFD + E+
Sbjct: 88 LESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER 144
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
N+ +W+A+I YS E LFR +++ G+ PD +L CA GD+ +G+ I
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+ + G+ + V +++ +YAKCG ++ A + F M ERDV+ W++++ Y NG
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE 264
Query: 288 EALQLFFEMQKENLRP 303
EA++L EM+KE + P
Sbjct: 265 EAVELVKEMEKEGISP 280
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 33/301 (10%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD N F W+ MI + + + +L+ M + G P+ F F +L+ CA
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +HS+V+K G + V +L Y+KCG L A K F + E++V +W +++
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
Y ++G EEAV+L + + + G+ P G W
Sbjct: 255 LAYCQNGKHEEAVELVKEMEKEGISP------------------GLVTW----------- 285
Query: 237 RNVFVGTTLVNMYAKC-GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
N+ +G N KC +M+ +++ + DV W+AMI G NG+ +AL +F +
Sbjct: 286 -NILIGG--YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M + P+ ++ +SAC+ L + G+ + F+ + ++G +L+D+Y+KCG
Sbjct: 343 MFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGK 402
Query: 356 M 356
+
Sbjct: 403 L 403
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
F + + WN+++ N + ++L M ++G P T+ ++ +L
Sbjct: 238 FFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK 297
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
L + G DVF +WTA+I G
Sbjct: 298 CDAAMDLMQKMETFGITADVF-------------------------------TWTAMISG 326
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+G+ +A+D+FR + G+ P++ ++ + AC+ L + G + + G +
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V VG +LV+MY+KCG +E+AR+VFD + +DV W++MI GY G +A +LF MQ
Sbjct: 387 VLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQD 446
Query: 299 ENLRPDCFAMVGVLSACARLG 319
NLRP+ ++S + G
Sbjct: 447 ANLRPNIITWNTMISGYIKNG 467
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 38/280 (13%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD N + + WN+MI G +L+ M P T+
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW---- 456
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+T+ S +K G G+ L K G + ++N A
Sbjct: 457 ------------NTMISGYIKNGDEGEAM---DLFQRMEKDGKV-----------QRNTA 490
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+W +I GY ++G +EA++LFR + P+S ++ +L ACA L LG+ + R +
Sbjct: 491 TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL--LGAK--MVREI 546
Query: 231 SESGLHRNV----FVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
L RN+ V L + YAK G +E +R +F GM +D++ W+++I GY +G
Sbjct: 547 HGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSY 606
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
AL LF +M+ + + P+ + ++ A +G + G +
Sbjct: 607 GPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL--HRNVFVGTT 244
EA L + G + + + +L +C G + GR + + GL +VFV T
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILH---ARFGLFTEPDVFVETK 120
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
L++MYAKCG + +AR+VFD M ER++ WSAMI Y+ RE +LF M K+ + PD
Sbjct: 121 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 180
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
F +L CA G ++ G ++ S + +++ +YAKCG +
Sbjct: 181 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 21/293 (7%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
NT WN +I G + N + ++L+ M F P S T +L ACA L + +H
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
V++ V+ L Y+K G + +R +F + K++ +W +LI GY G
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYG 607
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI------DRYMSESGLHRNVF 240
A+ LF + G+ P+ L ++ A +G++ G+ + D ++ + H
Sbjct: 608 PALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH---- 663
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG---LPREALQLFFEM 296
+ +V +Y + +EEA + M ++ + W + + G +G + A + F +
Sbjct: 664 -CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSL 722
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+ EN A ++S LGA +LG +G + L LG + I++
Sbjct: 723 EPENT-----ATESIVSQIYALGA-KLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 152/289 (52%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+ Y+++ +L G + LFD+ N + + ++I G V+ + + +L+ M
Sbjct: 157 EQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMW 216
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
++ E+ TF +L+A A L ++G LH +K G V + FV GL+ YSKCG +
Sbjct: 217 EELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIE 276
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
DAR F+ +PEK +W +I GY+ G EEA+ L + + G+ D L ++
Sbjct: 277 DARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIST 336
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+L L + + +G + T LV+ Y+K G ++ AR VFD + ++++ W+A
Sbjct: 337 KLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNA 396
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
++ GYA++G +A++LF +M N+ P+ + VLSACA G + G
Sbjct: 397 LMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQG 445
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 149/283 (52%), Gaps = 1/283 (0%)
Query: 73 TMIRGMVDNDCFHDGIQLYHSMHQQGFFPESF-TFTFVLKACARLCHFHLGHTLHSLVVK 131
+ I +V + F + +L+ + + F T+ +++AC RL ++ ++
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
GF + ++ +L + KCG + DAR++FD+IPE+N+ S+ ++I G+ G EA +L
Sbjct: 152 NGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFEL 211
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
F+ + E ++ +L A A LG + G+ + + G+ N FV L++MY+K
Sbjct: 212 FKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSK 271
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
CG +E+AR F+ M E+ V W+ +I GYA +G EAL L ++M+ + D F + +
Sbjct: 272 CGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIM 331
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ +L L+L +A + F S V TAL+D Y+K G
Sbjct: 332 IRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWG 374
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 9/250 (3%)
Query: 36 DNYLVSLVLRSSF-HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
DN VS L + G+ + F+ T WN +I G + + + L + M
Sbjct: 257 DNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM 316
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
G + FT + +++ +L L H+ +++ GF ++ T L+ FYSK G +
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRV 376
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
AR VFD +P KN+ SW AL+ GY+ G +AV LF ++ + P+ + VL AC
Sbjct: 377 DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Query: 215 ARLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEA----RRVFDGMLERD 269
A G G I MSE G+ ++ + + G ++EA RR L+
Sbjct: 437 AYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRR---APLKTT 493
Query: 270 VVCWSAMIQG 279
V W+A++
Sbjct: 494 VNMWAALLNA 503
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 187 EAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
EA +LF L + + + ++ AC RL + + + +M +G ++ +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
+ M+ KCG + +ARR+FD + ER++ + ++I G+ + G EA +LF M +E +
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+L A A LG++ +G + + N + LID+Y+KCG +
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDI 275
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 40/293 (13%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF-FPESFTFTFVLKACARLCHFHLGH 123
P+ F++NT++RG ++D H+ + ++ M ++GF FP+SF+F FV+KA G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
+H +K G +FV T L+G Y CG + ARKVFD++ + N+ +W A+I
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT------ 180
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
AC R D+ R I M L RN
Sbjct: 181 -----------------------------ACFRGNDVAGAREIFDKM----LVRNHTSWN 207
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
++ Y K G +E A+R+F M RD V WS MI G A NG E+ F E+Q+ + P
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ ++ GVLSAC++ G+ + G G ++ + + ALID+Y++CG++
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 2/215 (0%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
+L Y K G L A+++F ++P ++ SW+ +I G + +G E+ FR L G+ P+
Sbjct: 209 MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPN 268
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
+L VL AC++ G G+ + ++ ++G V V L++MY++CG++ AR VF+
Sbjct: 269 EVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFE 328
Query: 264 GMLE-RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
GM E R +V W++MI G A +G EA++LF EM + PD + + +L AC+ G ++
Sbjct: 329 GMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIE 388
Query: 323 LGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSM 356
G M + + ++DLY + G +
Sbjct: 389 EGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKL 423
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 132/292 (45%), Gaps = 17/292 (5%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G K +F + + + W+TMI G+ N F++ + + + G P + T VL
Sbjct: 217 GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVL 276
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN-V 169
AC++ F G LH V K G+ V V L+ YS+CG++ AR VF+ + EK +
Sbjct: 277 SACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCI 336
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SWT++I G + G EEAV LF + G+ PD + + +L AC+ G + G + Y
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG---EDY 393
Query: 230 MSESG----LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
SE + + +V++Y + G +++A M + + W ++ +S+G
Sbjct: 394 FSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHG 453
Query: 285 ---LPREALQLFFEMQKEN-----LRPDCFAMVGVLSACARLGALQLGNRAK 328
L + Q E+ N L + +A G A + + R K
Sbjct: 454 NIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 146/265 (55%), Gaps = 5/265 (1%)
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
S+ + G+ +++ + +++C F G H L +K GF+ DV++ + L+ Y G
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG 169
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ +A KVF+++PE+NV SWTA+I G+++ + + L+ + + P+ +L
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
AC G LG GR + GL + + +L++MY KCG +++A R+FD +DVV
Sbjct: 230 ACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS 289
Query: 273 WSAMIQGYASNGLPREALQLF-FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W++MI GYA +GL +A++LF M K +PD +GVLS+C G ++ G + LM
Sbjct: 290 WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM 349
Query: 332 DAEEFLSNPVLG--TALIDLYAKCG 354
AE L P L + L+DL + G
Sbjct: 350 -AEHGL-KPELNHYSCLVDLLGRFG 372
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 17/322 (5%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D YL S ++ G + +F++ N W MI G ++LY M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ P +TFT +L AC G ++H + G + + L+ Y KCG L+
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGAC 214
DA ++FD K+V SW ++I GY++ GL +A++LF ++ + G +PD+ + VL +C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
G + GR M+E GL + + LV++ + G ++EA + + M ++ + V W
Sbjct: 334 RHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIW 393
Query: 274 SAM-----IQGYASNGLPREALQLFFEMQKENLRPDCFAM-VGVLSACARLGALQLGNRA 327
++ + G G+ +L E PDC A V + + A +G +
Sbjct: 394 GSLLFSCRVHGDVWTGIRAAEERLMLE-------PDCAATHVQLANLYASVGYWKEAATV 446
Query: 328 KGLMDAEEFLSNPVLGTALIDL 349
+ LM + +NP G + I++
Sbjct: 447 RKLMKDKGLKTNP--GCSWIEI 466
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%)
Query: 199 GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
G D+ L + +C D +G + G +V++G++LV +Y G +E A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 259 RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARL 318
+VF+ M ER+VV W+AMI G+A L+L+ +M+K P+ + +LSAC
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
GAL G S + +LI +Y KCG +
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 145/299 (48%), Gaps = 1/299 (0%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ N TMI + + L+ M G P S +T +LK+
Sbjct: 140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRA 199
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H+ V++ G + +ETG++ Y KCG L A++VFD + K + T L+ G
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+++G +A+ LF L+ G+ DS VL ACA L +L G+ I +++ GL
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
V VGT LV+ Y KC S E A R F + E + V WSA+I GY EA++ F ++
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 299 ENLRP-DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+N + F + AC+ L +G + + + +ALI +Y+KCG +
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 148/301 (49%), Gaps = 4/301 (1%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K +FDQ ++ G D ++L+ + +G +SF F+ VLKACA L
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+LG +H+ V K G +V V T L+ FY KC A + F +I E N SW+A+I
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRP-DSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
GY + EEAV F+ L +S + AC+ L D G + + L
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ + + L+ MY+KCG +++A VF+ M D+V W+A I G+A G EAL+LF +
Sbjct: 419 IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKC 353
M ++P+ + VL+AC+ G ++ G M ++ P + +ID+YA+
Sbjct: 479 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTM-LRKYNVAPTIDHYDCMIDIYARS 537
Query: 354 G 354
G
Sbjct: 538 G 538
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 135/272 (49%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
++ + M + G S+++ + +AC L G LH + V ++
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
+L Y +C L DA K+FD++ E N S T +I Y+E G+ ++AV LF G+L G +P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
S+ +L + L GR I ++ +GL N + T +VNMY KCG + A+RVFD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
M + V + ++ GY G R+AL+LF ++ E + D F VL ACA L L L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
G + + S +GT L+D Y KC S
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%), Gaps = 3/223 (1%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ-GFFPESFTFTFVLKACARLCH 118
F + PN W+ +I G F + ++ + S+ + SFT+T + +AC+ L
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
++G +H+ +K +G + E+ L+ YSKCG L DA +VF+ + ++ +WTA I G
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSESGLHR 237
++ G EA+ LF ++ G++P+S + VL AC+ G + G+ +D + + +
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ ++++YA+ G ++EA + M E D + W + G
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 164/328 (50%), Gaps = 20/328 (6%)
Query: 41 SLVLRSSF-----HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+L++RS+ G +L FD + WN MI G N C L+ M
Sbjct: 147 NLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLML 206
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+G P+ FTF +L+A + + LH L +K GF + L+ Y KCG L
Sbjct: 207 TEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLC-EEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
+A K+ + ++++ S TALI G+S+ C +A D+F+ ++ M + D + +L C
Sbjct: 267 NAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKIC 326
Query: 215 ARLGDLGSGRWIDRY-MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
+ + GR I + + S + +V +G +L++MYAK G +E+A F+ M E+DV W
Sbjct: 327 TTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSW 386
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR------- 326
+++I GY +G +A+ L+ M+ E ++P+ + +LSAC+ G +LG +
Sbjct: 387 TSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMIN 446
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCG 354
G+ EE LS +ID+ A+ G
Sbjct: 447 KHGIEAREEHLS------CIIDMLARSG 468
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 158/322 (49%), Gaps = 6/322 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
+ L+ L L+ G+ H + LFD+ + W MI D + L+ MH+
Sbjct: 51 DMLIDLYLKQ----GDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR 106
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+ FT+ VLK+C L G +H V K G++ V + LL Y++CG + +
Sbjct: 107 EDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEE 166
Query: 157 ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
AR FD + E+++ SW A+I GY+ + + + LF+ +L G +PD +L A
Sbjct: 167 ARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIV 226
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
+ L + + G R+ + +LVN Y KCGS+ A ++ +G +RD++ +A+
Sbjct: 227 VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTAL 286
Query: 277 IQGYA-SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL-MDAE 334
I G++ N +A +F +M + + D + +L C + ++ +G + G + +
Sbjct: 287 ITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS 346
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
+ + LG +LID+YAK G +
Sbjct: 347 QIRFDVALGNSLIDMYAKSGEI 368
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H + GF ++ ++ L+ Y K G ++ ARK+FD I +++V SWTA+I +S G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
+A+ LF+ + ++ + VL +C LG L G I + + N+ V +
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
L+++YA+CG MEEAR FD M ERD+V W+AMI GY +N + LF M E +PD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
CF +L A + L++ + GL F + L +L++ Y KCGS+
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLA 266
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 160/323 (49%), Gaps = 10/323 (3%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
L+ + ++ F N + +FD+ N W MI + + I+ + M G
Sbjct: 208 LIDMFVKGENSFENAYK---VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC---GHLR 155
F + FT + V ACA L + LG LHS +++G V D VE L+ Y+KC G +
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVD 322
Query: 156 DARKVFDDIPEKNVASWTALICGYSES-GLCEEAVDLFRGLLEMG-LRPDSANLVHVLGA 213
D RKVFD + + +V SWTALI GY ++ L EA++LF ++ G + P+ A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C L D G+ + + GL N V ++++M+ K ME+A+R F+ + E+++V +
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSY 442
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+ + G N +A +L E+ + L F +LS A +G+++ G + +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 334 EEFLSNPVLGTALIDLYAKCGSM 356
N + ALI +Y+KCGS+
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSI 525
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 20/276 (7%)
Query: 94 MHQQGFFP-ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M + G P +S TF+ +LK+C R F LG +H+ +++ D + L+ YSK G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 153 HLRDARKVFDDIP---EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
A VF+ + +++V SW+A++ Y +G +A+ +F LE+GL P+
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 210 VLGACARLGDLGSGRWIDRYMSESG-LHRNVFVGTTLVNMYAKC-GSMEEARRVFDGMLE 267
V+ AC+ +G GR ++ ++G +V VG +L++M+ K S E A +VFD M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR- 326
+VV W+ MI G PREA++ F +M D F + V SACA L L LG +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 327 -----AKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
GL+D E +L+D+YAKC + G
Sbjct: 292 HSWAIRSGLVDDVE--------CSLVDMYAKCSADG 319
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDN-DCFHDGIQLYHSMHQQGFF-PESFTFTF 108
G+ + +FD+ + + W +I G + N + + I L+ M QG P FTF+
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
KAC L +G + K G + V ++ + K + DA++ F+ + EKN
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
+ S+ + G + E+A L + E L + +L A +G + G I
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ + GL N V L++MY+KCGS++ A RVF+ M R+V+ W++MI G+A +G
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 558
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
L+ F +M +E ++P+ V +LSAC+ +G + G R
Sbjct: 559 VLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR 596
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 16/330 (4%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTH---NPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
N L+SL +S G++ + +F+ + W+ M+ +N D I+++
Sbjct: 101 NSLISLYSKS----GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG-FVGDVFVETGLLGFYSKC- 151
+ G P + +T V++AC+ +G ++KTG F DV V L+ + K
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 152 GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
+A KVFD + E NV +WT +I + G EA+ F ++ G D L V
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC---GSMEEARRVFDGMLER 268
ACA L +L G+ + + SGL + V +LV+MYAKC GS+++ R+VFD M +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 269 DVVCWSAMIQGYASN-GLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNR 326
V+ W+A+I GY N L EA+ LF EM + ++ P+ F AC L ++G +
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G SN + ++I ++ K M
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRM 424
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 158/361 (43%), Gaps = 63/361 (17%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD + + T+I+G N+ + + ++L+ M G T V+ AC+ L
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 188
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE------------ 166
L SL +K G VFV T LL Y C L+DARK+FD++PE
Sbjct: 189 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 248
Query: 167 -------------------KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
K++ SW +I G +EA+ + +L G++P +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA----------------- 250
V +L A AR G + + + G F+ T+++ YA
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 251 --------------KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
K G +E+AR VFD ++D+ W+AMI GYA + P+ AL LF EM
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 297 -QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
++PD MV V SA + LG+L+ G RA ++ N L A+ID+YAKCGS
Sbjct: 429 ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGS 488
Query: 356 M 356
+
Sbjct: 489 I 489
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 36/342 (10%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LFDQ + W TMI G + + + + Y M + G P +L
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS--------------------- 149
A AR G LH +VK GF F++ ++ FY+
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 150 ----------KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
K G + AR+VFD +K++ SW A+I GY++S + A+ LFR ++
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 200 -LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
++PD+ +V V A + LG L G+ Y++ S + N + +++MYAKCGS+E A
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 259 RRVF---DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
+F + + W+A+I G A++G + AL L+ ++Q ++P+ VGVLSAC
Sbjct: 493 LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTA-LIDLYAKCGSM 356
G ++LG M ++ + + ++DL K G +
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRL 594
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 116/223 (52%), Gaps = 31/223 (13%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC------------------ 151
L +CA G +H V+K+G + ++ +L Y+KC
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 152 --------GHLR-----DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM 198
G++R DA K+FD +PE++ S+T LI GY+++ EA++LFR + +
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 199 GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
G+ + L V+ AC+ LG + R + + L VFV T L++MY C +++A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 259 RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
R++FD M ER++V W+ M+ GY+ GL +A +LF ++ ++++
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI 270
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFV 109
G + +FDQTH+ + F WN MI G + + L+ M P++ T V
Sbjct: 385 GMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF---DDIPE 166
A + L G H + + + + ++ Y+KCG + A +F +I
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISS 504
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-W 225
++ W A+ICG + G + A+DL+ L + ++P+S V VL AC G + G+ +
Sbjct: 505 STISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTY 564
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG 284
+ S+ G+ ++ +V++ K G +EEA+ + M ++ DV+ W ++ ++G
Sbjct: 565 FESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 31/178 (17%)
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV----- 261
LV LG+CA D+ GR I + +SGL N ++ +++NMYAKC + +A V
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 262 --------------------------FDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
FD M ER V ++ +I+GYA N EA++LF E
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
M+ + + + V+SAC+ LG + + L + + T L+ +Y C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 154/331 (46%), Gaps = 36/331 (10%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF-PESFTFTFVLKACARLCH 118
F+Q + WN+MI G + ++ M + P+ FT VL ACA L
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK------------------- 159
+G +HS +V TGF V L+ YS+CG + AR+
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 160 --------------VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
+F + +++V +WTA+I GY + G EA++LFR ++ G RP+S
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
L +L + L L G+ I +SG +V V L+ MYAK G++ A R FD +
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLI 474
Query: 266 -LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
ERD V W++MI A +G EAL+LF M E LRPD VGV SAC G + G
Sbjct: 475 RCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 325 NRAKGLM-DAEEFLSNPVLGTALIDLYAKCG 354
+ +M D ++ + ++DL+ + G
Sbjct: 535 RQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 159/362 (43%), Gaps = 65/362 (17%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF 119
FDQ ++ W TMI G + +H I++ M ++G P FT T VL + A
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 120 HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD----------------- 162
G +HS +VK G G+V V LL Y+KCG A+ VFD
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 163 --------------DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANL 207
+ E+++ +W ++I G+++ G A+D+F +L L PD L
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTL 282
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR------- 260
VL ACA L L G+ I ++ +G + V L++MY++CG +E ARR
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 261 --------------------------VFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
+F + +RDVV W+AMI GY +G EA+ LF
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M RP+ + + +LS + L +L G + G + + + ALI +YAK G
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 355 SM 356
++
Sbjct: 463 NI 464
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 71/325 (21%)
Query: 101 PESFTFTFVLKACARLCHFHLGHT--------LHSLVVKTGFVGDVFVETGLLGFYSKCG 152
P + + +L+ C L + + +H V+K+G + V++ L+ YSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 153 HLRDARKVFDD-------------------------------IPEKNVASWTALICGYSE 181
+ ARK+FD+ +P+++ SWT +I GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G +A+ + +++ G+ P L +VL + A + +G+ + ++ + GL NV V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 242 GTTLVNMYAKCGSMEEARRVFDGML-------------------------------ERDV 270
+L+NMYAKCG A+ VFD M+ ERD+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKEN-LRPDCFAMVGVLSACARLGALQLGNRAKG 329
V W++MI G+ G AL +F +M +++ L PD F + VLSACA L L +G +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCG 354
+ F + ++ ALI +Y++CG
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCG 328
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 48 FHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFT 107
G+ + K +F + + W MI G + + + I L+ SM G P S+T
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-E 166
+L + L G +H VK+G + V V L+ Y+K G++ A + FD I E
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-W 225
++ SWT++I ++ G EEA++LF +L GLRPD V V AC G + GR +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YA 281
D + + +V+++ + G ++EA+ + M +E DVV W +++ +
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
+ L + A + ++ EN A+ + SAC +
Sbjct: 598 NIDLGKVAAERLLLLEPEN-SGAYSALANLYSACGK 632
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 39 LVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG 98
LV + L+ H H +FDQ N W MI G V N + G+ L+ +M ++
Sbjct: 191 LVDMYLKFDDHAAAFH----VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN 246
Query: 99 FFPESFTFTFVLKACARLCH-FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
P T VL AC L + L +H + G D + + Y +CG++ +
Sbjct: 247 LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS 306
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
R +F+ ++V W+++I GY+E+G C E ++L + + G+ +S L+ ++ AC
Sbjct: 307 RVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 366
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
L + + + G ++ +G L++MYAKCGS+ AR VF + E+D+V WS+MI
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
Y +G EAL++F M K D A + +LSAC G ++
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE 471
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 9/326 (2%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
N L+S+ + F + + +FD+ + +T + ++I + ++ ++L M+
Sbjct: 85 SNSLISMYAK----FSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 96 QQGFFPESFTFTFVLKACARL-CHFHLGHTLHSLV-VKTGFVGDVFVETGLLGFYSKCGH 153
GF P+S +L C R+ + H+LV V V + T L+ Y K
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
A VFD + KN SWTA+I G + E VDLFR + LRP+ L+ VL A
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 214 CARLGDLGSG--RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
C L + GS + I + G H + + + MY +CG++ +R +F+ RDVV
Sbjct: 261 CVEL-NYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVV 319
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
WS+MI GYA G E + L +M+KE + + ++ ++SAC L + +
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 332 DAEEFLSNPVLGTALIDLYAKCGSMG 357
F+S+ +LG ALID+YAKCGS+
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLS 405
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 75 IRGMVDNDCFHDGIQLY----HSMHQQGFFPESFTFTFVLKACA-RLCHFHLGHTLHSLV 129
++G+V + + + ++LY HS+ GF + V+KACA + F LG LH L
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGF---TAILPSVIKACAFQQEPFLLGAQLHCLC 73
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
+K G D V L+ Y+K RKVFD++ ++ S+ ++I + GL EA+
Sbjct: 74 LKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAM 133
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR-----YMSESGLHRNVFVGTT 244
L + + G P S + +L C R +GS + R + + + +V + T
Sbjct: 134 KLIKEMYFYGFIPKSELVASLLALCTR---MGSSSKVARMFHALVLVDERMQESVLLSTA 190
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
LV+MY K A VFD M ++ V W+AMI G +N + LF MQ+ENLRP+
Sbjct: 191 LVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPN 250
Query: 305 CFAMVGVLSACARLG-ALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
++ VL AC L L G ++ L A + +Y +CG++
Sbjct: 251 RVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 5/254 (1%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
H D L + + GN ++LF+ + + +W++MI G + + + L +
Sbjct: 284 HADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQ 343
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M ++G S T ++ AC T+HS ++K GF+ + + L+ Y+KCG
Sbjct: 344 MRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L AR+VF ++ EK++ SW+++I Y G EA+++F+G+++ G D + +L A
Sbjct: 404 LSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSA 463
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVG--TTLVNMYAKCGSMEEARRVFDGM-LERDV 270
C G + + I + H V + +N+ + G +++A V M ++
Sbjct: 464 CNHAGLVEEAQTI--FTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSA 521
Query: 271 VCWSAMIQGYASNG 284
WS+++ ++G
Sbjct: 522 RIWSSLLSACETHG 535
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 149/295 (50%), Gaps = 9/295 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F+ +P+ WNT++ G DN + M G ++FT++ L C
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
F LG L S VVKTG D+ V + YS+ G R AR+VFD++ K++ SW +L+ G
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 179 YSESGLCE-EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
S+ G EAV +FR ++ G+ D + V+ C DL R I + G
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ VG L++ Y+KCG +E + VF M ER+VV W+ MI +SN +A+ +F M+
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI---SSN--KDDAVSIFLNMR 364
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+ + P+ VG+++A ++ G + GL F+S P +G + I LYAK
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 138/270 (51%), Gaps = 8/270 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K +F Q N W TMI D D + ++ +M G +P TF ++ A
Sbjct: 331 KSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H L +KTGFV + V + Y+K L DA+K F+DI + + SW A+I
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG--SGRWIDRYMSESG 234
G++++G EA+ +F + P+ VL A A D+ G+ ++ + G
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 504
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
L+ V + L++MYAK G+++E+ +VF+ M +++ W+++I Y+S+G + LF
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLG 324
+M KEN+ PD + VL+AC R G + G
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKG 594
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 13/323 (4%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCF-HDGIQLYHSMH 95
N +++ RS G+ + +FD+ + WN+++ G+ F + + ++ M
Sbjct: 213 NSFITMYSRS----GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM 268
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
++G + +FT V+ C L +H L +K G+ + V L+ YSKCG L
Sbjct: 269 REGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLE 328
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+ VF + E+NV SWT +I S ++AV +F + G+ P+ V ++ A
Sbjct: 329 AVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVK 383
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+ G I ++G VG + + +YAK ++E+A++ F+ + R+++ W+A
Sbjct: 384 CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNA 443
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG--ALQLGNRAKGLMDA 333
MI G+A NG EAL++F E + P+ + VL+A A +++ G R +
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 334 EEFLSNPVLGTALIDLYAKCGSM 356
S PV+ +AL+D+YAK G++
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNI 525
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 10/301 (3%)
Query: 59 LFDQTHNPN-TFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP---ESFTFTFVLKACA 114
LFD + N T N I + + + ++ Q G+F + T LKAC
Sbjct: 30 LFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACR 89
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
G +H +GF V V ++G Y K G +A +F+++ + +V SW
Sbjct: 90 --GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNT 147
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
++ G+ ++ + A++ + G+ D+ L C G + + ++G
Sbjct: 148 ILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG-LPREALQLF 293
L ++ VG + + MY++ GS ARRVFD M +D++ W++++ G + G EA+ +F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+M +E + D + V++ C L+L + GL + S +G L+ Y+KC
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 354 G 354
G
Sbjct: 325 G 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA--RLCHFHLGHTLHSL 128
WN MI G N H+ ++++ S + P +TF VL A A G H+
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 129 VVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEA 188
++K G V + LL Y+K G++ ++ KVF+++ +KN WT++I YS G E
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 189 VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVN 247
++LF +++ + PD + VL AC R G + G I M E L + + +V+
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 248 MYAKCGSMEEARRV 261
M + G ++EA +
Sbjct: 620 MLGRAGRLKEAEEL 633
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 16/215 (7%)
Query: 147 FYSKCGHLRDARKVFDDIPEKNVASWTALICGYSES---GLCEEAVDLFRGLLEMGL--- 200
FYS R A K+FD ++N T++ SES A+ +F+ L++G
Sbjct: 20 FYSP---YRIAHKLFDGSSQRNAT--TSINHSISESLRRNSPARALSIFKENLQLGYFGR 74
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
D L L AC GDL G I + + SG V V ++ MY K G + A
Sbjct: 75 HMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC 132
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
+F+ +++ DVV W+ ++ G+ N + AL M+ + D F LS C
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 321 LQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
LG + + + S+ V+G + I +Y++ GS
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 37/307 (12%)
Query: 55 HPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC- 113
+ + +FD+ P +N MI G + + + + L M G + +T + VLKA
Sbjct: 87 YARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASN 146
Query: 114 ARLCHFHLGHTL----HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
+R L +L H+ ++K D + T L+ Y K G L AR VF+ + ++NV
Sbjct: 147 SRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENV 206
Query: 170 ASWTALICGYSESGLCEEA--------------------------------VDLFRGLLE 197
T++I GY G E+A VD++ +
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR 266
Query: 198 MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEE 257
G P+ + V+GAC+ L G+ + + +SG++ ++ +G++L++MYAKCG + +
Sbjct: 267 AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 258 ARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
ARRVFD M E++V W++MI GY NG P EAL+LF M++ + P+ +G LSAC+
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSH 386
Query: 318 LGALQLG 324
G + G
Sbjct: 387 SGLVDKG 393
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 3/224 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDN-DCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
+F+ T + ++N M+ G + + + +Y SM + GF P TF V+ AC+ L
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
+G +H+ ++K+G + + + LL Y+KCG + DAR+VFD + EKNV SWT++I
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS-ESGLH 236
GY ++G EEA++LF + E + P+ + L AC+ G + G I M + +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMK 407
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQG 279
+ +V++ + G + +A M ER D W+A++
Sbjct: 408 PKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSS 451
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 37/272 (13%)
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSE 181
G +H+ ++KTGF D+ + LL + KCG L AR+VFD++P+ ++++ +I GY +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL-----GSGRWIDRYMSESGLH 236
GL +E + L + + G + D L VL A G R + + + +
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF--- 293
+ + T LV+ Y K G +E AR VF+ M + +VVC ++MI GY + G +A ++F
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 294 -----------------------------FEMQKENLRPDCFAMVGVLSACARLGALQLG 324
MQ+ P+ V+ AC+ L + ++G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + ++ +G++L+D+YAKCG +
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 222 SGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYA 281
+G+ I + ++G ++ + L+ ++ KCG + AR+VFD + + + ++ MI GY
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS--- 338
+GL +E L L M + D + + VL A G+ + R+ + +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 339 --NPVLGTALIDLYAKCGSM 356
+ VL TAL+D Y K G +
Sbjct: 172 ELDDVLITALVDTYVKSGKL 191
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 170/393 (43%), Gaps = 70/393 (17%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D Y+ + ++ S ++ + L+ +P + ++++I + F I ++
Sbjct: 47 QNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSR 106
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M G P+S + K CA L F +G +H + +G D FV+ + Y +CG
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 154 LRDARKVFDDIPEK-----------------------------------NVASWTALICG 178
+ DARKVFD + +K N+ SW ++ G
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
++ SG +EAV +F+ + +G PD + VL + L GR I Y+ + GL ++
Sbjct: 227 FNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKD 286
Query: 239 VFVGTTLVNMYAKCGS-------------------------------MEEARRVF----D 263
V + +++MY K G +++A +F +
Sbjct: 287 KCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKE 346
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
+E +VV W+++I G A NG EAL+LF EMQ ++P+ + +L AC + AL
Sbjct: 347 QTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGH 406
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G G L N +G+ALID+YAKCG +
Sbjct: 407 GRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI 439
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 158/327 (48%), Gaps = 38/327 (11%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N WN ++ G + + + ++ +H GF P+ T + VL + ++G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP--------------------- 165
V+K G + D V + ++ Y K GH+ +F+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 166 --------------EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
E NV SWT++I G +++G EA++LFR + G++P+ + +L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
AC + LG GR + L NV VG+ L++MYAKCG + ++ VF+ M +++V
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
CW++++ G++ +G +E + +F + + L+PD + +LSAC ++G G + +M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 332 DAEEFLSNPVLG--TALIDLYAKCGSM 356
+EE+ P L + +++L + G +
Sbjct: 516 -SEEYGIKPRLEHYSCMVNLLGRAGKL 541
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H+ ++K+G D ++ L+ YS DA V IP+ + S+++LI +++ L
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
+++ +F + GL PDS L ++ CA L G+ I SGL + FV ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
+MY +CG M +AR+VFD M ++DVV SA++ YA G E +++ EM+ + +
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 306 FAMVGVLSACARLG 319
+ G+LS R G
Sbjct: 218 VSWNGILSGFNRSG 231
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 117/249 (46%), Gaps = 5/249 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+L +QT N W ++I G N + ++L+ M G P T +L AC +
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G + H V+ + +V V + L+ Y+KCG + ++ VF+ +P KN+ W +L+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GL 235
G+S G +E + +F L+ L+PD + +L AC ++G G + MSE G+
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGI 521
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASNGLPREALQ 291
+ + +VN+ + G ++EA + M E D W A++ + L A +
Sbjct: 522 KPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAE 581
Query: 292 LFFEMQKEN 300
F ++ EN
Sbjct: 582 KLFHLEPEN 590
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ + +L S FG + +LFD+ ++ WNTMI G D L+ M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
+ G + ++F+ +LK A + F LG +H LV+K G+ +V+V + L+ Y+KC +
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM--GLRPDSANLVHVLGA 213
DA + F +I E N SW ALI G+ + + A L GL+EM + D+ +L
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLL-GLMEMKAAVTMDAGTFAPLLTL 212
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVC 272
+ + + + GL + + +++ YA CGS+ +A+RVFDG+ +D++
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
W++MI G++ + L A +LF +MQ+ + D + G+LSAC+ G G++
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 333 AEEFLSNPVLGTALIDLYAK 352
+ ALI +Y +
Sbjct: 333 KKGLEQVTSATNALISMYIQ 352
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 4/286 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFL-WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
G+ K +FD + WN+MI G ++ +L+ M + + +T+T +
Sbjct: 252 GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGL 311
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK--CGHLRDARKVFDDIPEK 167
L AC+ H G +LH +V+K G L+ Y + G + DA +F+ + K
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
++ SW ++I G+++ GL E+AV F L ++ D +L +C+ L L G+ I
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLP 286
++SG N FV ++L+ MY+KCG +E AR+ F + + V W+AMI GYA +GL
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLG 491
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
+ +L LF +M +N++ D +L+AC+ G +Q G LM+
Sbjct: 492 QVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLME 537
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 150/299 (50%), Gaps = 4/299 (1%)
Query: 60 FDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP-ESFTFTFVLKACARLCH 118
F + PN+ WN +I G V L M + ++ TF +L
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNVASWTALIC 177
+L +H+ V+K G ++ + ++ Y+ CG + DA++VFD + K++ SW ++I
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G+S+ L E A +LF + + D +L AC+ G+ + + + GL +
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 238 NVFVGTTLVNMYAK--CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
L++MY + G+ME+A +F+ + +D++ W+++I G+A GL +A++ F
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
++ ++ D +A +L +C+ L LQLG + L F+SN + ++LI +Y+KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S+ ++ F G LF+ + + WN++I G D ++ + +
Sbjct: 344 NALISMYIQ--FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
+ + F+ +L++C+ L LG +H+L K+GFV + FV + L+ YSKCG +
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 157 ARKVFDDIPEK-NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
ARK F I K + +W A+I GY++ GL + ++DLF + ++ D +L AC+
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 216 RLGDLGSG 223
G + G
Sbjct: 522 HTGLIQEG 529
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H +K G + D++V +L Y K G L A +FD++P+++ SW +I GY+ G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
E+A LF + G D + +L A + G + + + G NV+VG++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
V+MYAKC +E+A F + E + V W+A+I G+
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%)
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
Y + G +++V +++ Y K G + A +FD M +RD V W+ MI GY S G +
Sbjct: 25 YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED 84
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
A LF M++ D ++ +L A + LG + GL+ + N +G++L+D
Sbjct: 85 AWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 349 LYAKC 353
+YAKC
Sbjct: 145 MYAKC 149
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 151/313 (48%), Gaps = 30/313 (9%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQG-FFPESFTFTFVLKACARLC-HFHLGHTLHSLV 129
+ +I+ + + LY + ++G +FP +L+ACA + LG LHS
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPG--WVPLILRACACVVPRVVLGKLLHSES 72
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG------ 183
+K G DV V + L+ Y KCG + ARKVFD++PE+NVA+W A+I GY +G
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 184 -------LCEEAVDLFRGLLEMGLRPDSAN-----------LVHVLGACARLGDLGSGRW 225
+C V + G R + L +V LG + R
Sbjct: 133 GLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRK 192
Query: 226 ID--RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
++ R E +N FV + +++ Y + G + EAR +F + RD+V W+ +I GYA N
Sbjct: 193 MEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
G +A+ FF MQ E PD + +LSACA+ G L +G L++ N +
Sbjct: 253 GYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVS 312
Query: 344 TALIDLYAKCGSM 356
ALID+YAKCG +
Sbjct: 313 NALIDMYAKCGDL 325
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 147/332 (44%), Gaps = 38/332 (11%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+ +FD+ N WN MI G + N D + + + T+ ++K +
Sbjct: 101 RKVFDEMPERNVATWNAMIGGYMSNG---DAVLASGLFEEISVCRNTVTWIEMIKGYGKR 157
Query: 117 CHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN------- 168
L + F + +V + +LG Y + DARK F+DIPEKN
Sbjct: 158 IEIEKARELFE---RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLM 214
Query: 169 ------------------------VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
+ W LI GY+++G ++A+D F + G PD+
Sbjct: 215 MSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDA 274
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
+ +L ACA+ G L GR + ++ G+ N FV L++MYAKCG +E A VF+
Sbjct: 275 VTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ R V C ++MI A +G +EAL++F M+ +L+PD + VL+AC G L G
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ M ++ N LI L + G +
Sbjct: 395 LKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
++ ++ SL++ F G+ H + +F + + +WNT+I G N D I + +
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M +G+ P++ T + +L ACA+ +G +HSL+ G + FV L+ Y+KCG
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L +A VF+ I ++VA ++I + G +EA+++F + + L+PD + VL A
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
C G L G I M + NV L+++ + G ++EA R+ M
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 148/282 (52%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
++ S F G + + +FD + N +I G+++N+ DG++L+ M + P
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
S T+ L AC+ G +H+L+ K G ++ +E+ L+ YSKCG + DA +F+
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
E + S T ++ G +++G EEA+ F +L+ G+ D+ + VLG LG
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
G+ + + + N FV L+NMY+KCG + +++ VF M +R+ V W++MI +A
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+G AL+L+ EM ++P + +L AC+ +G + G
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 144/299 (48%), Gaps = 3/299 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + N + G + N G L M G F + T T VL C
Sbjct: 112 LFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLTIVLSVCDTPEF 170
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+ +H+L + +G+ ++ V L+ Y KCG R VFD + +NV + TA+I G
Sbjct: 171 CLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISG 230
Query: 179 YSESGLCEEAVDLFRGLLEMGL-RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
E+ L E+ + LF L+ GL P+S + L AC+ + G+ I + + G+
Sbjct: 231 LIENELHEDGLRLF-SLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIES 289
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ + + L++MY+KCGS+E+A +F+ E D V + ++ G A NG EA+Q F M
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + D + VL +L LG + L+ +F N + LI++Y+KCG +
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDL 408
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 124/269 (46%), Gaps = 12/269 (4%)
Query: 99 FFPESFTFTFVLKACARLCHF-HLGHTLHSLVVKTG-FVGDV---------FVETGLLGF 147
F + +L C R F HLG LH+ ++K F V V LL
Sbjct: 40 FLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99
Query: 148 YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
Y+KCG L DA K+FD++P ++V S + G+ + E L + +L G D A L
Sbjct: 100 YAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATL 158
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
VL C + I SG + + VG L+ Y KCG R VFDGM
Sbjct: 159 TIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSH 218
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA 327
R+V+ +A+I G N L + L+LF M++ + P+ + L+AC+ + G +
Sbjct: 219 RNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI 278
Query: 328 KGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
L+ S + +AL+D+Y+KCGS+
Sbjct: 279 HALLWKYGIESELCIESALMDMYSKCGSI 307
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ +F+ T + ++ G+ N + IQ + M Q G ++ + VL
Sbjct: 305 GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL 364
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
LG LHSLV+K F G+ FV GL+ YSKCG L D++ VF +P++N
Sbjct: 365 GVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYV 424
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW ++I ++ G A+ L+ + + ++P + +L AC+ +G + GR + M
Sbjct: 425 SWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEM 484
Query: 231 SE-SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
E G+ T +++M + G ++EA+ D + L+ D W A++
Sbjct: 485 KEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALL 533
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 17/309 (5%)
Query: 59 LFDQTHNPNTFLWNTMIRGMV--DNDCFHDGIQLYHSMHQQGFFPESF---TFTFVLKAC 113
LFD+ N WN +I G++ D D H + + + F S +F +++ C
Sbjct: 93 LFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLC 152
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
+ G LH L+VK G F T L+ FY KCG + +AR+VF+ + ++++ W
Sbjct: 153 TDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWN 212
Query: 174 ALICGYSESGLCEEAVDLFR--GLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
AL+ Y +G+ +EA L + G + R D +L AC + G+ I +
Sbjct: 213 ALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILF 268
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQ 291
+ ++ V T L+NMYAK + +AR F+ M+ R+VV W+AMI G+A NG REA++
Sbjct: 269 KVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMR 328
Query: 292 LFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE---EFLSNPVLGTALID 348
LF +M ENL+PD VLS+CA+ A+ + + ++ + +FLS + +LI
Sbjct: 329 LFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS---VANSLIS 385
Query: 349 LYAKCGSMG 357
Y++ G++
Sbjct: 386 SYSRNGNLS 394
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 156/301 (51%), Gaps = 8/301 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM--HQQGFFPESFTFTFVLKACA 114
+ +F+ + + LWN ++ V N + L M + F + FTF+ +L AC
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC- 255
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
G +H+++ K + D+ V T LL Y+K HL DAR+ F+ + +NV SW A
Sbjct: 256 ---RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNA 312
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
+I G++++G EA+ LF +L L+PD VL +CA+ + + + +++ G
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFF 294
+ V +L++ Y++ G++ EA F + E D+V W+++I AS+G E+LQ+ F
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQM-F 431
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRA-KGLMDAEEFLSNPVLGTALIDLYAKC 353
E + L+PD + VLSAC+ G +Q G R K + + + + T LIDL +
Sbjct: 432 ESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRA 491
Query: 354 G 354
G
Sbjct: 492 G 492
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 21/254 (8%)
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K A L H H +VK G +F++ LL Y+K DA K+FD++P +N+
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 171 SWTALICGYSES----------GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
+W LI G + G C + LF + D + + ++ C ++
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILF-----TDVSLDHVSFMGLIRLCTDSTNM 158
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
+G + M + GL + F T+LV+ Y KCG + EARRVF+ +L+RD+V W+A++ Y
Sbjct: 159 KAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
Query: 281 ASNGLPREALQLFFEM--QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
NG+ EA L M K R D F +LSAC ++ G + ++ +
Sbjct: 219 VLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQF 274
Query: 339 NPVLGTALIDLYAK 352
+ + TAL+++YAK
Sbjct: 275 DIPVATALLNMYAK 288
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLV 129
+W M G N D + +Y M P +F+ + LKAC L +G +H+ +
Sbjct: 203 VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
VK D V LL Y + G DARKVFD + E+NV +W +LI S+ E
Sbjct: 263 VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMF 322
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
+LFR + E + A L +L AC+R+ L +G+ I + +S +V + +L++MY
Sbjct: 323 NLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMY 382
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
KCG +E +RRVFD ML +D+ W+ M+ YA NG E + LF M + + PD V
Sbjct: 383 GKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFV 442
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
+LS C+ G + G M EF +P L L+D+ + G +
Sbjct: 443 ALLSGCSDTGLTEYGLSLFERMKT-EFRVSPALEHYACLVDILGRAGKI 490
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 8/261 (3%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKT-GFVGDVFVETGLLGFYSKCGHLRDARK 159
PE++T +L AC H G + SL++ + + + L+ +S C L ARK
Sbjct: 131 PEAYTD--LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 160 VFDDIPEKNVAS---WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
+FDD+ + ++ + W A+ GYS +G +A+ ++ +L + P + ++ L AC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L DL GR I + + + V L+ +Y + G ++AR+VFDGM ER+VV W+++
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG-LMDAEE 335
I + E LF +MQ+E + + +L AC+R+ AL G ++ ++E
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
P+L + L+D+Y KCG +
Sbjct: 369 KPDVPLLNS-LMDMYGKCGEV 388
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 7/288 (2%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D + +++L+ G + +FD N WN++I + H+ L+ M
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
++ T T +L AC+R+ G +H+ ++K+ DV + L+ Y KCG +
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
+R+VFD + K++ASW ++ Y+ +G EE ++LF ++E G+ PD V +L C+
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 216 RLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCW 273
G G +R +E + + LV++ + G ++EA +V + M + W
Sbjct: 450 DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIW 509
Query: 274 SAMIQG---YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARL 318
+++ + + + A + F ++ N P + MV + A A++
Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELFVLEPHN--PGNYVMVSNIYADAKM 555
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 145/293 (49%), Gaps = 8/293 (2%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN+MI + + LY M +GF + FT VL A L H G H ++
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 131 KTGFVGDVFVETGLLGFYSKCGH---LRDARKVFDDIPEKNVASWTALICGYS-ESGLCE 186
K GF + V +GL+ FYSKCG + D+ KVF +I ++ W +I GYS L E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN-VFVGTTL 245
EAV FR + +G RPD + V V AC+ L + I +S + N + V L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
+++Y K G++++AR VFD M E + V ++ MI+GYA +G EAL L+ M + P+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 306 FAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
V VLSACA G + G M E F P + +IDL + G +
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMK-ETFKIEPEAEHYSCMIDLLGRAGKL 499
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 8/322 (2%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF 100
++++++ H + LFD+ P+T +NT+I G D + L+ M + GF
Sbjct: 78 NVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
+ FT + ++ AC L LH V GF V + +YSK G LR+A V
Sbjct: 138 VDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 161 FDDIPE-KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGD 219
F + E ++ SW ++I Y + +A+ L++ ++ G + D L VL A L
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 220 LGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCG---SMEEARRVFDGMLERDVVCWSAM 276
L GR + ++G H+N VG+ L++ Y+KCG M ++ +VF +L D+V W+ M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 277 IQGYASN-GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE 335
I GY+ N L EA++ F +MQ+ RPD + V V SAC+ L + + GL
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 336 FLSNPV-LGTALIDLYAKCGSM 356
SN + + ALI LY K G++
Sbjct: 376 IPSNRISVNNALISLYYKSGNL 397
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%), Gaps = 9/266 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGM-VDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
+F + +P+ +WNTMI G ++ + + ++ + M + G P+ +F V AC+ L
Sbjct: 300 VFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLS 359
Query: 118 HFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
+H L +K+ + + V L+ Y K G+L+DAR VFD +PE N S+ +I
Sbjct: 360 SPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMI 419
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GL 235
GY++ G EA+ L++ +L+ G+ P+ V VL ACA G + G+ M E+ +
Sbjct: 420 KGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKI 479
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD-VVCWSAMI---QGYASNGLPREALQ 291
+ ++++ + G +EEA R D M + V W+A++ + + + L A
Sbjct: 480 EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
Query: 292 LFFEMQKENLRPDCFAMVGVLSACAR 317
MQ P + M+ + A AR
Sbjct: 540 ELMVMQPLAATP--YVMLANMYADAR 563
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 34/265 (12%)
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL--------------------------R 155
G +LH+L VK+ ++ + YSKCG L +
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 156 D-----ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
D AR++FD+IP+ + S+ LI GY+++ A+ LF+ + ++G D L +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 211 LGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE-RD 269
+ AC DL + + + G V V Y+K G + EA VF GM E RD
Sbjct: 147 IAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
V W++MI Y + +AL L+ EM + + D F + VL+A L L G + G
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHG 264
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCG 354
+ F N +G+ LID Y+KCG
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCG 289
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
+N L+SL +S GN + +FD+ N +N MI+G + + + LY M
Sbjct: 384 NNALISLYYKS----GNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVE--TGLLGFYSKCGH 153
G P TF VL ACA G + +K F + E + ++ + G
Sbjct: 440 DSGIAPNKITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 154 LRDARKVFDDIPEK-NVASWTALI 176
L +A + D +P K +W AL+
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALL 522
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 170/341 (49%), Gaps = 44/341 (12%)
Query: 52 NTHHPKLLF-DQTHNPNTFLWNTMIRGMVD--NDCFHDGIQLYHSMHQQGFFPESFTFTF 108
N KLLF + T NPN F++NTMI + N+CF LY SM + P+ TF +
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIRHRVSPDRQTFLY 138
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
++KA + L H H +V +G+ ++ L+ FY + G+ A KVF +P +
Sbjct: 139 LMKASSFLSEVKQIHC-HIIVSGCLSLGN-YLWNSLVKFYMELGNFGVAEKVFARMPHPD 196
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR---- 224
V+S+ +I GY++ G EA+ L+ ++ G+ PD ++ +L C L D+ G+
Sbjct: 197 VSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 225 WIDR----YMS----------------ESGLHRNVFVG---------TTLVNMYAKCGSM 255
WI+R Y S ESGL + F T+V + + G M
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 256 EEARRVFDGMLERDVVCWSAMIQGYASNGL-PREALQLFFEMQ-KENLRPDCFAMVGVLS 313
E A+ VFD M +RD+V W++++ GY+ G R +LF+EM E ++PD MV ++S
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
A G L G GL+ + + L +ALID+Y KCG
Sbjct: 377 GAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCG 417
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 35/323 (10%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
NYL + +++ GN + +F + +P+ +N MI G + ++LY M
Sbjct: 166 NYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS 225
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG--FVGDVFVETGLLGFYSKC--- 151
G P+ +T +L C L LG +H + + G + ++ + LL Y KC
Sbjct: 226 DGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKES 285
Query: 152 ----------------------------GHLRDARKVFDDIPEKNVASWTALICGYSESG 183
G + A+ VFD +P++++ SW +L+ GYS+ G
Sbjct: 286 GLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKG 345
Query: 184 LCEEAV-DLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+ V +LF + + ++PD +V ++ A G+L GRW+ + L + F+
Sbjct: 346 CDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
+ L++MY KCG +E A VF E+DV W++MI G A +G ++ALQLF MQ+E +
Sbjct: 406 SSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGV 465
Query: 302 RPDCFAMVGVLSACARLGALQLG 324
P+ ++ VL+AC+ G ++ G
Sbjct: 466 TPNNVTLLAVLTACSHSGLVEEG 488
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 3/216 (1%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGI-QLYHSMH-QQGFFPESFTF 106
G+ + +FDQ + WN+++ G C + +L++ M + P+ T
Sbjct: 312 RLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTM 371
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
++ A G +H LV++ GD F+ + L+ Y KCG + A VF E
Sbjct: 372 VSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATE 431
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
K+VA WT++I G + G ++A+ LF + E G+ P++ L+ VL AC+ G + G +
Sbjct: 432 KDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 227 DRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEARRV 261
+M + G +LV++ + G +EEA+ +
Sbjct: 492 FNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
P NV + +I S S E L+ ++ + PD ++++ A + L ++ +
Sbjct: 96 PNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---K 150
Query: 225 WIDRYMSESG-LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
I ++ SG L ++ +LV Y + G+ A +VF M DV ++ MI GYA
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD--AEEFLSNPV 341
G EAL+L+F+M + + PD + ++ +L C L ++LG G ++ + SN +
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 342 LGTALIDLYAKCGSMG 357
L AL+D+Y KC G
Sbjct: 271 LSNALLDMYFKCKESG 286
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 165/338 (48%), Gaps = 41/338 (12%)
Query: 47 SFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
SF FG P FLWN +I+ + L M + G + F+
Sbjct: 77 SFSFGEVEDP------------FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSL 124
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
+ VLKAC+RL G +H + KTG D+F++ L+G Y KCG L +R++FD +P+
Sbjct: 125 SLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPK 184
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR---------------PDSANLVHVL 211
++ S+ ++I GY + GL A +LF L+ M ++ D ++ L
Sbjct: 185 RDSVSYNSMIDGYVKCGLIVSARELF-DLMPMEMKNLISWNSMISGYAQTSDGVDIASKL 243
Query: 212 GACARLGDLGS-GRWIDRYMSESGLH-----------RNVFVGTTLVNMYAKCGSMEEAR 259
A DL S ID Y+ + R+V T+++ YAK G + A+
Sbjct: 244 FADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAK 303
Query: 260 RVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN-LRPDCFAMVGVLSACARL 318
+FD M RDVV +++M+ GY N EAL++F +M+KE+ L PD +V VL A A+L
Sbjct: 304 TLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQL 363
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G L + ++F LG ALID+Y+KCGS+
Sbjct: 364 GRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 131/259 (50%), Gaps = 8/259 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N WN+MI G DG+ + + + ++ ++ + L
Sbjct: 219 NLISWNSMISGYAQTS---DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
++ + DV ++ Y+K G + A+ +FD +P ++V ++ +++ GY ++
Sbjct: 276 DVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHM 331
Query: 187 EAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
EA+++F + E L PD LV VL A A+LG L + Y+ E + +G L
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 391
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDC 305
++MY+KCGS++ A VF+G+ + + W+AMI G A +GL A + ++++ +L+PD
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
Query: 306 FAMVGVLSACARLGALQLG 324
VGVL+AC+ G ++ G
Sbjct: 452 ITFVGVLNACSHSGLVKEG 470
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 19/193 (9%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFY--SKCGHLRD-ARKVFDDIPEKNVAS---------- 171
+H ++KTG + + + T ++ + S+ +L D AR VF E +V S
Sbjct: 31 IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFH---EYHVCSFSFGEVEDPF 87
Query: 172 -WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
W A+I +S +A+ L +LE G+ D +L VL AC+RLG + G I ++
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
++GL ++F+ L+ +Y KCG + +R++FD M +RD V +++MI GY GL A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 291 QLF--FEMQKENL 301
+LF M+ +NL
Sbjct: 208 ELFDLMPMEMKNL 220
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 24/181 (13%)
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGS--GRWIDRYMSESGLHRNVFVGTTLVNM 248
+F+ +E + ++ +HVLG+C D+ GR I ++G+ +N + T +V
Sbjct: 3 VFKSTMECSI----SSTIHVLGSCKTSDDVNQIHGRLI-----KTGIIKNSNLTTRIVLA 53
Query: 249 YAKCGS---MEEARRVFD---------GMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+A + AR VF G +E D W+A+I+ ++ PR+AL L M
Sbjct: 54 FASSRRPYLADFARCVFHEYHVCSFSFGEVE-DPFLWNAVIKSHSHGKDPRQALLLLCLM 112
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + D F++ VL AC+RLG ++ G + G + S+ L LI LY KCG +
Sbjct: 113 LENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCL 172
Query: 357 G 357
G
Sbjct: 173 G 173
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ H L+F+ N + WN MI G+ + + + + P+ TF VL
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL-RDARKVFDDIPEKNV 169
AC+ HS +VK G + C L R K+ E +
Sbjct: 459 NACS-----------HSGLVKEGLL---------------CFELMRRKHKI-----EPRL 487
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+ ++ S SG E A +L EM + P+ L AC+ + +G + ++
Sbjct: 488 QHYGCMVDILSRSGSIELAKNLIE---EMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 230 MS-ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
+ ++G + + +V L NMYA G ++ RRV M ER +
Sbjct: 545 LILQAGYNPSSYV--LLSNMYASFGMWKDVRRVRTMMKERKI 584
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 164/334 (49%), Gaps = 17/334 (5%)
Query: 1 MALELKNLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLR--SSFHFGNTHHPKL 58
MA ++Q SF+Q+K Q ++L S +L + FG+
Sbjct: 1 MARVYMETMIQKCVSFSQIK--QLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQ 58
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP------ESFTFTFVLKA 112
+F P T WN +IRG + Y SM QQ ++ T +F LKA
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 113 CAR-LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
CAR LC + LH + + G D + T LL YSK G L A K+FD++P ++VAS
Sbjct: 119 CARALCSSAMDQ-LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS 231
W ALI G EA++L++ + G+R +V LGAC+ LGD+ G I S
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML-ERDVVCWSAMIQGYASNGLPREAL 290
NV V ++MY+KCG +++A +VF+ ++ VV W+ MI G+A +G AL
Sbjct: 238 ND----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
++F +++ ++PD + + L+AC G ++ G
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D+ L + +L + G+ LFD+ + WN +I G+V + + ++LY M
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHL 154
+G T L AC+ HLG + G+ D V V + YSKCG +
Sbjct: 203 TEGIRRSEVTVVAALGACS-----HLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFV 257
Query: 155 RDARKVFDDIP-EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
A +VF+ +K+V +W +I G++ G A+++F L + G++PD + + L A
Sbjct: 258 DKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTA 317
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVC 272
C G + G + M+ G+ RN+ +V++ ++ G + EA + M + D V
Sbjct: 318 CRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVL 377
Query: 273 WSAMI 277
W +++
Sbjct: 378 WQSLL 382
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 158/325 (48%), Gaps = 14/325 (4%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D + +++L N + FD+ + WNTMI G +L++SM
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 96 QQGFFPESFTFTFVLKA--CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
++ + + ++ + HF K V V T ++ Y K
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHF----------FKVAPVRGVVAWTAMITGYMKAKK 232
Query: 154 LRDARKVFDDIP-EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+ A +F D+ KN+ +W A+I GY E+ E+ + LFR +LE G+RP+S+ L L
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
C+ L L GR I + +S+S L +V T+L++MY KCG + +A ++F+ M ++DVV
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-KGLM 331
W+AMI GYA +G +AL LF EM +RPD V VL AC G + +G + ++
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 332 DAEEFLSNPVLGTALIDLYAKCGSM 356
+ P T ++DL + G +
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKL 437
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 132/300 (44%), Gaps = 16/300 (5%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
L + F N +I V + ++++H M + + + K +R+
Sbjct: 52 LTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMME 111
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
H L + + D F +L Y + + A+ FD +P K+ ASW +I G
Sbjct: 112 ---AHQLFDEIPEP----DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITG 164
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+ G E+A +LF ++E + + ++ GDL + + R
Sbjct: 165 YARRGEMEKARELFYSMME----KNEVSWNAMISGYIECGDLEKAS----HFFKVAPVRG 216
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
V T ++ Y K +E A +F M + +++V W+AMI GY N P + L+LF M
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+E +RP+ + L C+ L ALQLG + ++ ++ T+LI +Y KCG +G
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 9/326 (2%)
Query: 35 QDNYLVSLVLRSSF-HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+ NY+ S +L + + G+ + + +FD+ + WN MI G++ + +G+ L+
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
MH GF P+ +T V A L +G +H +K G D+ V + L Y + G
Sbjct: 82 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGK 141
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
L+D V +P +N+ +W LI G +++G E + L++ + G RP+ V VL +
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
C+ L G G+ I + G V V ++L++MY+KCG + +A + F + D V W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261
Query: 274 SAMIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
S+MI Y +G EA++LF M ++ N+ + A + +L AC+ G L ++ L D
Sbjct: 262 SSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSG---LKDKGLELFD 318
Query: 333 --AEEFLSNPVLG--TALIDLYAKCG 354
E++ P L T ++DL + G
Sbjct: 319 MMVEKYGFKPGLKHYTCVVDLLGRAG 344
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 31/244 (12%)
Query: 145 LGFYSKCG-------------------------------HLRDARKVFDDIPEKNVASWT 173
+ YSK G L +ARKVFD++P++ + +W
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
A+I G + EE + LFR + +G PD L V A L + G+ I Y +
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLF 293
GL ++ V ++L +MY + G +++ V M R++V W+ +I G A NG P L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
M+ RP+ V VLS+C+ L G + S + ++LI +Y+KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 354 GSMG 357
G +G
Sbjct: 241 GCLG 244
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 40/326 (12%)
Query: 65 NP---NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL 121
NP +T WNT+I G N + +++ SM + G + +F VL + L +
Sbjct: 219 NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI 278
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR-------------------------- 155
G +H+ V+K G + FV +G++ Y KCG+++
Sbjct: 279 GKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSS 338
Query: 156 -----DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR-PDSANLVH 209
+A+++FD + EKN+ WTA+ GY + ++L R + PDS +V
Sbjct: 339 QGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVS 398
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
VLGAC+ + G+ I + +G+ + + T V+MY+KCG++E A R+FD ERD
Sbjct: 399 VLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERD 458
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-K 328
V ++AMI G A +G ++ Q F +M + +PD + +LSAC G + G + K
Sbjct: 459 TVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFK 518
Query: 329 GLMDAEEFLSNPVLG--TALIDLYAK 352
+++A + +P G T +IDLY K
Sbjct: 519 SMIEA--YNISPETGHYTCMIDLYGK 542
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 71/390 (18%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTH-NPNTFLWNTMIRGMVDND-CFHDGIQLYHSMH 95
Y + V+ + F N + LF+ + + +NT++ G D C + I+++ MH
Sbjct: 55 YSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMH 114
Query: 96 QQ---GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
++ + + FT T ++K A+L + G LH ++VKTG G F + L+ YSKCG
Sbjct: 115 RKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCG 174
Query: 153 HLRDARKVFD-----------------------DI----------PEKN-VASWTALICG 178
++ +F+ DI PE N SW LI G
Sbjct: 175 KFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAG 234
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y+++G EEA+ + + E GL+ D + VL + L L G+ + + ++G + N
Sbjct: 235 YAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSN 294
Query: 239 VFVGTTLVNMYAKCGSME-------------------------------EARRVFDGMLE 267
FV + +V++Y KCG+M+ EA+R+FD + E
Sbjct: 295 KFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE 354
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFE-MQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+++V W+AM GY + P L+L + E PD MV VL AC+ ++ G
Sbjct: 355 KNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKE 414
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G L + L TA +D+Y+KCG++
Sbjct: 415 IHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 127/301 (42%), Gaps = 70/301 (23%)
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H +K+G L+ YSK G LR+AR VFD++ E+NV SW A+I Y +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 186 EEAVDLF------RGLL------------------------EMGLRP------DSANLVH 209
+EA +LF R L+ EM + D +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG----- 264
++ A+L ++ G + + ++G F ++L++MY+KCG +E +F+G
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 265 --------MLE---------------------RDVVCWSAMIQGYASNGLPREALQLFFE 295
M+ D + W+ +I GYA NG EAL++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M++ L+ D + VL+ + L +L++G + SN + + ++D+Y KCG+
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 356 M 356
M
Sbjct: 311 M 311
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 4/237 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS-MHQQGFFPESFTFTFV 109
G K LFD N +W M G ++ ++L + + + P+S V
Sbjct: 340 GKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSV 399
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L AC+ + G +H ++TG + D + T + YSKCG++ A ++FD E++
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+ A+I G + G ++ F + E G +PD + +L AC G + G +
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKS 519
Query: 230 MSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM--LERDVVCWSAMIQGYASN 283
M E+ + T ++++Y K +++A + +G+ +E+D V A + + N
Sbjct: 520 MIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWN 576
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 140/276 (50%), Gaps = 8/276 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LFD++ + F W M+ G + N + +L+ M ++ ++ +L
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAML 319
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ + L ++ +V ++ Y++CG + +A+ +FD +P+++
Sbjct: 320 AGYVQGERMEMAKELFDVMP----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW A+I GYS+SG EA+ LF + G R + ++ L CA + L G+ + +
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+ G FVG L+ MY KCGS+EEA +F M +D+V W+ MI GY+ +G AL
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+ F M++E L+PD MV VLSAC+ G + G +
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 18/307 (5%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD+ N WN ++ V N + L+ S + +
Sbjct: 171 GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K + +++ V DV ++ Y++ G + +AR++FD+ P ++V
Sbjct: 231 KKKKIVEARQFFDSMN--------VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV-HVLGACARLGDLGSGRWIDRY 229
+WTA++ GY ++ + EEA +LF + E +A L +V G + +
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA---------KE 333
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ + RNV T++ YA+CG + EA+ +FD M +RD V W+AMI GY+ +G EA
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L+LF +M++E R + + LS CA + AL+LG + G + + + +G AL+ +
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 350 YAKCGSM 356
Y KCGS+
Sbjct: 454 YCKCGSI 460
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 5/255 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G K LFD+ + W MI G + + ++L+ M ++G +F+ L
Sbjct: 357 GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CA + LG LH +VK G+ FV LL Y KCG + +A +F ++ K++
Sbjct: 417 STCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIV 476
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
SW +I GYS G E A+ F + GL+PD A +V VL AC+ G + GR M
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 231 SES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG---L 285
++ G+ N +V++ + G +E+A + M E D W ++ +G L
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 286 PREALQLFFEMQKEN 300
A F M+ EN
Sbjct: 597 AETAADKIFAMEPEN 611
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 146/348 (41%), Gaps = 32/348 (9%)
Query: 13 LKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWN 72
LK Q ++ D ++ + S G + +F + ++ +N
Sbjct: 40 LKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99
Query: 73 TMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKT 132
MI G + N F +L+ M ++ ++ ++K R + L ++ +
Sbjct: 100 GMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 133 GFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLF 192
DV +L Y++ G + DAR VFD +PEKN SW AL+ Y ++ EEA LF
Sbjct: 156 ----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
Query: 193 RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID-RYMSESGLHRNVFVGTTLVNMYAK 251
+ N V C G + + ++ R +S R+V T++ YA+
Sbjct: 212 KS---------RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
G ++EAR++FD +DV W+AM+ GY N + EA +LF +M + N
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----------E 312
Query: 312 LSACARLGALQLGNR---AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+S A L G R AK L D N +I YA+CG +
Sbjct: 313 VSWNAMLAGYVQGERMEMAKELFDVMP-CRNVSTWNTMITGYAQCGKI 359
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G +L+FD+ N W TMI G N+ +L+ M ++ ++T +L
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSML 241
Query: 111 KACARLCHFHLGHTLHSLV------VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
LG+TL + + + V ++ + + G + AR+VFD +
Sbjct: 242 ----------LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
+++ A+W +I Y G EA+DLF + + G+RP +L+ +L CA L L GR
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
+ ++ +V+V + L+ MY KCG + +A+ VFD +D++ W+++I GYAS+G
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
L EAL++F EM P+ ++ +L+AC+ G L+ G
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 148/342 (43%), Gaps = 41/342 (11%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ------ 96
++ F G + LFD+ N WN ++ G + N + ++ M +
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 97 ----QGFFPE-----------------SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV 135
+G+ E ++T + L+ ++ V
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----V 169
Query: 136 GDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGL 195
DV T ++G + G + +AR +FD++ E+NV +WT +I GY ++ VD+ R L
Sbjct: 170 KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNN----RVDVARKL 225
Query: 196 LEMGLRPDSANLVHVLGACARLGDLGSGRWID-RYMSESGLHRNVFVGTTLVNMYAKCGS 254
E+ + +L LG SGR D E + V ++ + + G
Sbjct: 226 FEVMPEKTEVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGE 280
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+ +ARRVFD M +RD W MI+ Y G EAL LF +MQK+ +RP +++ +LS
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
CA L +LQ G + + +F + + + L+ +Y KCG +
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 129/332 (38%), Gaps = 71/332 (21%)
Query: 37 NYLVSLVLRSSFHF------GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQL 90
YL S + SF G + + FD WN+++ G N + QL
Sbjct: 11 TYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQL 70
Query: 91 YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
+ M ++ +V GL+ Y K
Sbjct: 71 FDEMSER---------------------------------------NVVSWNGLVSGYIK 91
Query: 151 CGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
+ +AR VF+ +PE+NV SWTA++ GY + G+ EA LF + E + + +
Sbjct: 92 NRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVM 147
Query: 211 LGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
G G + R + M ++V T ++ + G ++EAR +FD M ER+V
Sbjct: 148 FGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL 330
V W+ MI GY N A +LF M ++ +S + L L R +
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKT----------EVSWTSMLLGYTLSGR---I 250
Query: 331 MDAEEFLS----NPVLG-TALIDLYAKCGSMG 357
DAEEF PV+ A+I + + G +
Sbjct: 251 EDAEEFFEVMPMKPVIACNAMIVGFGEVGEIS 282
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 135/245 (55%), Gaps = 10/245 (4%)
Query: 92 HSMHQQGFFPESFTFTFVLK-ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
H Q F +SF+ F +K + A+ G +H+LV K GF + ++T L+GFYS
Sbjct: 53 HRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSS 112
Query: 151 CGHLRDARKVFDDIPEK-NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
G + AR+VFD+ PEK N+ WTA+I Y+E+ EA++LF+ + + D +
Sbjct: 113 VGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTV 172
Query: 210 VLGACARLGDLGSGRWI--DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
L ACA LG + G I + L ++ + +L+NMY K G E+AR++FD +
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEM------QKENLRPDCFAMVGVLSACARLGAL 321
+DV +++MI GYA NG +E+L+LF +M Q + P+ +GVL AC+ G +
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLV 292
Query: 322 QLGNR 326
+ G R
Sbjct: 293 EEGKR 297
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 139/269 (51%), Gaps = 12/269 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + N LW +MI G + N + + +F S VL +
Sbjct: 50 VFCEMVEKNVVLWTSMINGYLLNKDL---------VSARRYFDLSPERDIVLWNTMISGY 100
Query: 119 FHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALIC 177
+G+ L + + DV +L Y+ G + +VFDD+PE+NV SW LI
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIK 160
Query: 178 GYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY+++G E + F+ +++ G + P+ A + VL ACA+LG G+W+ +Y G +
Sbjct: 161 GYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN 220
Query: 237 R-NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
+ +V V L++MY KCG++E A VF G+ RD++ W+ MI G A++G EAL LF E
Sbjct: 221 KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHE 280
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLG 324
M+ + PD VGVL AC +G ++ G
Sbjct: 281 MKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 9/274 (3%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG-FFP 101
VL + G+ + +FD N F WN +I+G N + + + M +G P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 102 ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKV 160
T T VL ACA+L F G +H G+ DV V+ L+ Y KCG + A +V
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEV 246
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
F I +++ SW +I G + G EA++LF + G+ PD V VL AC +G +
Sbjct: 247 FKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLV 306
Query: 221 GSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI- 277
G + + ++ + + +V++ ++ G + +A + M ++ D V W+ ++
Sbjct: 307 EDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLG 366
Query: 278 --QGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
+ Y + AL+ +++ N P F M+
Sbjct: 367 ASKVYKKVDIGEVALEELIKLEPRN--PANFVML 398
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 103/217 (47%), Gaps = 14/217 (6%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
L G G + A KVF ++ EKNV WT++I GY L + + R ++ D
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGY----LLNKDLVSARRYFDLSPERD 89
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
++ +G++ R + M R+V T++ YA G ME RVFD
Sbjct: 90 IVLWNTMISGYIEMGNMLEARSLFDQMP----CRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQ 322
M ER+V W+ +I+GYA NG E L F M E ++ P+ M VLSACA+LGA
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 323 LGNRAKGLMDAEEFLSNPV---LGTALIDLYAKCGSM 356
G E N V + ALID+Y KCG++
Sbjct: 206 FGKWVHKY--GETLGYNKVDVNVKNALIDMYGKCGAI 240
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 164/346 (47%), Gaps = 46/346 (13%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFH--DGIQLYHSMHQQGF-FPESFTFTF 108
N + + +FD+ PNT L+ ++ + H + M + P F +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY-SKCGHLRDARKVFDDIPEK 167
VLK+ L +H+ + K+GF V V+T LL Y S H+ AR++FD++ E+
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 168 NVASWTALICGYSESG-------------------------------LCEEAVDLFRGLL 196
NV SWTA++ GY+ SG L EAV LFR ++
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 197 -EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSM 255
E +RP+ +V VL ACA+ G L + I + L +VFV +LV++Y KCG++
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 256 EEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN---LRPDCFAMVGVL 312
EEA VF ++ + W++MI +A +G EA+ +F EM K N ++PD +G+L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 313 SACARLGALQLGNRAKGLMD--AEEFLSNPVLGT--ALIDLYAKCG 354
+AC G L ++ +G D F P + LIDL + G
Sbjct: 372 NACTHGG---LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAG 414
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 6/235 (2%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFTFV 109
G+ + LF+ + WN ++ N F + + L+ M ++ P T V
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L ACA+ L +H+ + DVFV L+ Y KCG+L +A VF +K++
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMG---LRPDSANLVHVLGACARLGDLGSGR-W 225
+W ++I ++ G EEA+ +F ++++ ++PD + +L AC G + GR +
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGY 386
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
D + G+ + L+++ + G +EA V M ++ D W +++
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 125/276 (45%), Gaps = 39/276 (14%)
Query: 120 HLGH--TLHSLVVKTGFVGDVFVETGLLGFYS-KCGHLRDARKVFDDIPEKNVASWTALI 176
HL H + S ++ +G F+ LL F + + +L AR +FD N + A++
Sbjct: 36 HLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVL 95
Query: 177 CGYSESGL--CEEAVDLFRGLLEMGL-RPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
YS S A FR ++ + RP+ VL + L S + ++ +S
Sbjct: 96 TAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 234 GLHRNVFVGTTLVNMYAKCGS-MEEARRVFDGMLERDVVCWSAMIQGYA----------- 281
G H V V T L++ YA S + AR++FD M ER+VV W+AM+ GYA
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVAL 215
Query: 282 --------------------SNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGA 320
NGL EA+ LF M E ++RP+ +V VLSACA+ G
Sbjct: 216 FEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGT 275
Query: 321 LQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
LQL + S+ + +L+DLY KCG++
Sbjct: 276 LQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 147/288 (51%), Gaps = 35/288 (12%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P+ F F+ ++KACA L G +H + + + D V++ L+ Y+KCG L A+ V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFR---------------GLLEMG------ 199
FD I KN SWTA++ GY++SG EEA++LFR G ++ G
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 200 -----LRPDSANLV------HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNM 248
+R + +++ ++GACA L +GR + + G VF+ L++M
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDM 282
Query: 249 YAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
YAKC + A+ +F M RDVV W+++I G A +G +AL L+ +M ++P+
Sbjct: 283 YAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTF 342
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
VG++ AC+ +G ++ G M +++ P L T L+DL + G
Sbjct: 343 VGLIYACSHVGFVEKGRELFQSM-TKDYGIRPSLQHYTCLLDLLGRSG 389
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 33/280 (11%)
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
L+ CAR LH+ +VK G V + L+ Y KCG A +VFD++P ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 170 ASWTALICGYSESGLCEEAV-DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
+W +++ +++ L + + GLRPD ++ ACA LG + GR +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ S + V ++LV+MYAKCG + A+ VFD + ++ + W+AM+ GYA +G E
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 289 ALQL-------------------------------FFEMQKENLRP-DCFAMVGVLSACA 316
AL+L F EM++E + D + ++ ACA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
L A G + GL+ A F S + ALID+YAKC +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+H L CAR L + + + ++ + G+ + + TLVN+Y KCG+ A +VFD M
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 268 RDVVCWSAMIQGYASNGLPREAL-QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
RD + W++++ L + L LRPD F ++ ACA LG++ G +
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCG 354
E+ ++ V+ ++L+D+YAKCG
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCG 154
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 11/266 (4%)
Query: 64 HNP--NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG-FFPESFTFTFVLKACARLCHFH 120
H P N F WN +I + I L+ M ++ P+ FT +L+AC+
Sbjct: 92 HMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAK 151
Query: 121 LGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYS 180
G +H L +K GF +FV + L+ Y G L ARK+FDD+P ++ +TA+ GY
Sbjct: 152 SGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV 211
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR----WIDRYMSESGLH 236
+ G + +FR + G DS +V +L AC +LG L G+ W R S GL+
Sbjct: 212 QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN 271
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+G + +MY KC ++ A VF M RDV+ WS++I GY +G + +LF EM
Sbjct: 272 ----LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEM 327
Query: 297 QKENLRPDCFAMVGVLSACARLGALQ 322
KE + P+ +GVLSACA G ++
Sbjct: 328 LKEGIEPNAVTFLGVLSACAHGGLVE 353
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 109/224 (48%), Gaps = 2/224 (0%)
Query: 132 TGFVGDVFVETGLLGFYSKCGHL-RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
T +V + + L+ YSK HL + VF +P +N+ SW +I +S SG +++D
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 119
Query: 191 LF-RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
LF R E +RPD L +L AC+ + SG I + G ++FV + LV MY
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
G + AR++FD M RD V ++AM GY G L +F EM D MV
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
+L AC +LGAL+ G G LG A+ D+Y KC
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKC 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G H + LFD ++ L+ M G V G+ ++ M GF +S +L
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
AC +L G ++H ++ + + + Y KC L A VF ++ ++V
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID-RY 229
SW++LI GY G + LF +L+ G+ P++ + VL ACA G L W+ R
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRL 361
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
M E + + ++ + ++ G +EEA + + M
Sbjct: 362 MQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM------------------------ 397
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
++PD M VLS C G +++G R
Sbjct: 398 ----------PVKPDEAVMGAVLSGCKVYGNVEVGER 424
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 32/288 (11%)
Query: 69 FLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC-ARLCHFHLGHTLHS 127
F WN MI G + L+ M + F P+ +TF+ ++ AC A + G +H+
Sbjct: 170 FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHA 229
Query: 128 LVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI----------------------- 164
+++K G+ V + +L FY+K G DA + + I
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEK 289
Query: 165 --------PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACAR 216
PEKN+ +WT +I GY +G E+A+ F +++ G+ D VL AC+
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
L LG G+ I + G +VG LVN+YAKCG ++EA R F + +D+V W+ M
Sbjct: 350 LALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+ + +GL +AL+L+ M ++PD +G+L+ C+ G ++ G
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEG 457
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 152/371 (40%), Gaps = 65/371 (17%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD +T WNTM+ + I L+ + P+ ++FT +L
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD------- 163
CA L + G + SLV+++GF + V L+ Y KC A KVF D
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 164 --------------------------IPEKNVASWTALICGYSESGLCEEAVDLFRGLLE 197
+P++ +W +I G++ G E + LF+ +LE
Sbjct: 138 EVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLE 197
Query: 198 MGLRPDSANLVHVLGAC-ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
+PD ++ AC A ++ GR + M ++G V ++++ Y K GS +
Sbjct: 198 SEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRD 257
Query: 257 EARR-------------------------------VFDGMLERDVVCWSAMIQGYASNGL 285
+A R VF E+++V W+ MI GY NG
Sbjct: 258 DAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGD 317
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
+AL+ F EM K + D FA VL AC+ L L G G + F +G A
Sbjct: 318 GEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNA 377
Query: 346 LIDLYAKCGSM 356
L++LYAKCG +
Sbjct: 378 LVNLYAKCGDI 388
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 142 TGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
T + +K G + AR+VFD +PE + +W ++ YS GL +EA+ LF L +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
PD + +L CA LG++ GR I + SG ++ V +L++MY KC A +V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 262 FDGML---------------------------------ERDVVCWSAMIQGYASNGLPRE 288
F M +R W+ MI G+A G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSAC-ARLGALQLGNRAKGLMDAEEFLSNPVLGTALI 347
L LF EM + +PDC+ +++AC A + G +M + S +++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 348 DLYAKCGS 355
Y K GS
Sbjct: 248 SFYTKLGS 255
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
++ + G T +F N W TMI G N ++ + M + G +
Sbjct: 277 IIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSD 336
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
F + VL AC+ L G +H ++ GF G +V L+ Y+KCG +++A + F
Sbjct: 337 HFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
DI K++ SW ++ + GL ++A+ L+ ++ G++PD+ + +L C+ G +
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 223 GRWI-DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
G I + + + + V T +++M+ + G + EA+
Sbjct: 457 GCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 37/308 (12%)
Query: 59 LFDQTHNPNTFLWNTMIR-GMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA--R 115
+F NP+TF +NT+IR + + + M ++ P+ TF FV KACA +
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 116 LCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS-------------------------- 149
L TLH ++ G + D+F L+ YS
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 150 -----KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K + AR++FD +P +++ SW +LI GY++ C EA+ LF ++ +GL+PD+
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
+V L ACA+ GD G+ I Y L + F+ T LV+ YAKCG ++ A +F+
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
++ + W+AMI G A +G + F +M ++PD + VL C+ G L
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG---LV 366
Query: 325 NRAKGLMD 332
+ A+ L D
Sbjct: 367 DEARNLFD 374
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 41/281 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD + WN++I G + + I+L+ M G P++ L ACA+
Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGD 264
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+ G +H + D F+ TGL+ FY+KCG + A ++F+ +K + +W A+I G
Sbjct: 265 WQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITG 324
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ G E VD FR ++ G++PD + VL C S SGL
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGC----------------SHSGL--- 365
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGM-----LERDVVCWSAMIQGYASNGLPREALQLF 293
++EAR +FD M + R++ + M GL EA ++
Sbjct: 366 ----------------VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMI 409
Query: 294 FEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+M K+ R A G+L C G +++ +A + A
Sbjct: 410 EQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKA 450
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%)
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
R+V L++ K + AR +FD M RD+V W+++I GYA REA++LF E
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M L+PD A+V LSACA+ G Q G + + L T L+D YAKCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCG 298
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 149/310 (48%), Gaps = 6/310 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ + +F + ++ WN+MI G+ N CF + ++ Y SM + P SFT L
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+CA L LG +H +K G +V V L+ Y++ G+L + RK+F +PE +
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 171 SWTALICGYSESGLC-EEAVDLFRGLLEMGLRPDSANLVHVLGACAR--LGDLGSGRWID 227
SW ++I + S EAV F G + + VL A + G+LG + I
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG--KQIH 540
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER-DVVCWSAMIQGYASNGLP 286
++ + L+ Y KCG M+ ++F M ER D V W++MI GY N L
Sbjct: 541 GLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELL 600
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
+AL L + M + R D F VLSA A + L+ G S+ V+G+AL
Sbjct: 601 AKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSAL 660
Query: 347 IDLYAKCGSM 356
+D+Y+KCG +
Sbjct: 661 VDMYSKCGRL 670
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDND-CFHDGIQLYHSMHQQGFFPESFTFTFV 109
G + + +F + WN++I + ++ + + + + + G TF+ V
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSV 523
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-N 168
L A + L LG +H L +K + E L+ Y KCG + K+F + E+ +
Sbjct: 524 LSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
+W ++I GY + L +A+DL +L+ G R DS VL A A + L G +
Sbjct: 584 NVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ L +V VG+ LV+MY+KCG ++ A R F+ M R+ W++MI GYA +G E
Sbjct: 644 CSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEE 703
Query: 289 ALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLG 324
AL+LF M+ + PD VGVLSAC+ G L+ G
Sbjct: 704 ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 146/315 (46%), Gaps = 12/315 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ-GFFPESFTF--- 106
G+ + + +F+Q N N ++ G+V + +L+ M+ PES+
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLS 316
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKVFDDIP 165
+F + A G +H V+ TG V V + GL+ Y+KCG + DAR+VF +
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
+K+ SW ++I G ++G EAV+ ++ + + P S L+ L +CA L G+
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN-- 283
I + G+ NV V L+ +YA+ G + E R++F M E D V W+++I A +
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 284 GLPREALQLFFEMQK--ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
LP EA+ F Q+ + L F+ V + G +LG + GL
Sbjct: 497 SLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKNNIADEAT 553
Query: 342 LGTALIDLYAKCGSM 356
ALI Y KCG M
Sbjct: 554 TENALIACYGKCGEM 568
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 16/336 (4%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+D YL + ++ + G++ + +FD+ N W ++ G N + + M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHL--GHTLHSLVVKTGFVGDVFVETGLLGFYSKC- 151
++G F + F VL+AC + + G +H L+ K + D V L+ Y KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 152 GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
G + A F DI KN SW ++I YS++G A +F + G RP ++
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 212 GACARLGDLGSGRWIDRYM---SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
L + R +++ M +SGL ++FVG+ LV+ +AK GS+ AR+VF+ M R
Sbjct: 214 TTACSLTE-PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR 272
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLS-----ACARLGALQ 322
+ V + ++ G EA +LF +M ++ P+ + + +LS + A L+
Sbjct: 273 NAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLK 330
Query: 323 LGNRAKGLMDAEEFLSNPV-LGTALIDLYAKCGSMG 357
G G + + V +G L+++YAKCGS+
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 8/252 (3%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K+ + WN+MI G + N+ + L M Q G +SF + VL A A +
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H+ V+ DV V + L+ YSKCG L A + F+ +P +N SW ++I
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 177 CGYSESGLCEEAVDLFRGL-LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-G 234
GY+ G EEA+ LF + L+ PD V VL AC+ G L G MS+S G
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYA-SNG----LPRE 288
L + + + ++ + G +++ + M ++ +V+ W ++ +NG L ++
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812
Query: 289 ALQLFFEMQKEN 300
A ++ F+++ EN
Sbjct: 813 AAEMLFQLEPEN 824
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
HS + K DV++ L+ Y + G ARKVFD++P +N SW ++ GYS +G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS--GRWIDRYMSESGLHRNVFVG 242
+EA+ R +++ G+ + V VL AC +G +G GR I M + + V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 243 TTLVNMYAKC-GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
L++MY KC GS+ A F + ++ V W+++I Y+ G R A ++F MQ +
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 302 RPDCFAMVGVLSACARLGA--LQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
RP + +++ L ++L + + L++ +G+ L+ +AK GS+
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 217 LGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAM 276
+G G+ R+ + ++ L ++V++ L+N Y + G AR+VFD M R+ V W+ +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL--GNRAKGLMDAE 334
+ GY+ NG +EAL +M KE + + +A V VL AC +G++ + G + GLM
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKL 133
Query: 335 EFLSNPVLGTALIDLYAKC-GSMG 357
+ + V+ LI +Y KC GS+G
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVG 157
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 160/337 (47%), Gaps = 34/337 (10%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GNTH + +F + + WN +I ++ ++L+ SM + GF P T+ VL
Sbjct: 264 GNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVL 323
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ + G +H +++K G + + L+ FY+KCG+L D+R FD I +KN+
Sbjct: 324 GVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIV 383
Query: 171 SWTALICGYS--ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC------------AR 216
W AL+ GY+ + +C + LF +L+MG RP L +C R
Sbjct: 384 CWNALLSGYANKDGPIC---LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVR 440
Query: 217 LG---------DLGSGRWIDRYMSESGLHRNVFVGTTLV-------NMYAKCGSMEEARR 260
+G L ++ M+++ L + G T V +Y++ G E+ +
Sbjct: 441 MGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVK 500
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
+ + + D V W+ I + + E ++LF M + N+RPD + V +LS C++L
Sbjct: 501 LISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCD 560
Query: 321 LQLGNRAKGLMDAEEF-LSNPVLGTALIDLYAKCGSM 356
L LG+ GL+ +F ++ + LID+Y KCGS+
Sbjct: 561 LTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSI 597
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 158/343 (46%), Gaps = 3/343 (0%)
Query: 15 SFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTM 74
SF + K H Q Y+ + ++ G +FDQ N +NT+
Sbjct: 27 SFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTI 86
Query: 75 IRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG- 133
I+G ++ M G+ P T + +L +CA L G LH L +K G
Sbjct: 87 IKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGL 144
Query: 134 FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFR 193
F+ D FV T LL Y + L A +VF+D+P K++ +W ++ G +E + FR
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 194 GLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCG 253
L+ MG ++ + VL + + DL + + ++ GL + V +L++ Y KCG
Sbjct: 205 ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCG 264
Query: 254 SMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
+ A R+F D+V W+A+I A + P +AL+LF M + P+ V VL
Sbjct: 265 NTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + L G + G++ + VLG ALID YAKCG++
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 44/310 (14%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDND---CFHDGIQLYHSMHQQGFFPESFTFT 107
GN +L FD + N WN ++ G + D C + L+ M Q GF P +TF+
Sbjct: 365 GNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPIC----LSLFLQMLQMGFRPTEYTFS 420
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL---------------------- 145
LK+C C L LHS++V+ G+ + +V + L+
Sbjct: 421 TALKSC---CVTEL-QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 146 ----------GFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGL 195
G YS+ G ++ K+ + + + SW I S S EE ++LF+ +
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM 536
Query: 196 LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH-RNVFVGTTLVNMYAKCGS 254
L+ +RPD V +L C++L DL G I ++++ + FV L++MY KCGS
Sbjct: 537 LQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGS 596
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+ +VF+ E++++ W+A+I +G +EAL+ F E +PD + + +L+A
Sbjct: 597 IRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
Query: 315 CARLGALQLG 324
C G ++ G
Sbjct: 657 CRHGGMVKEG 666
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G H L P+T WN I +D + I+L+ M Q P+ +TF +L
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 111 KACARLCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
C++LC LG ++H L+ KT F D FV L+ Y KCG +R KVF++ EKN+
Sbjct: 553 SLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNL 612
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+WTALI G +EA++ F+ L +G +PD + + +L AC G + G + +
Sbjct: 613 ITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK 672
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
M + G+ + V++ A+ G ++EA + M D W + G
Sbjct: 673 MKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN M+ + + + + + + G +F VLK + + + LH
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
K G ++ V L+ Y KCG+ A ++F D ++ SW A+IC ++S +A+
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302
Query: 191 LFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYA 250
LF + E G P+ V VLG + + L GR I + ++G + +G L++ YA
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362
Query: 251 KCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVG 310
KCG++E++R FD + ++++VCW+A++ GYA+ P L LF +M + RP +
Sbjct: 363 KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQMLQMGFRPTEYTFST 421
Query: 311 VLSAC 315
L +C
Sbjct: 422 ALKSC 426
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 41 SLVLRSSFH-FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF 99
++ + SSF FG H +F+ + WNTMI + +Y MH G
Sbjct: 329 TMTMYSSFEDFGAAHK---VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 100 FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK 159
P+ FTF +L L + + + ++K G + + L+ YSK G + A
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 160 VFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR--PDSANLVHVLGACARL 217
+F+ KN+ SW A+I G+ +G E ++ F LLE +R PD+ L +L C
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVST 502
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
L G Y+ G + +G L+NMY++CG+++ + VF+ M E+DVV W+++I
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLI 562
Query: 278 QGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLG 324
Y+ +G A+ + MQ E + PD VLSAC+ G ++ G
Sbjct: 563 SAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 140/273 (51%), Gaps = 8/273 (2%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
+ + ++ M + P TF V+ +C+ C +GH +H L +KTG+ V +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCS--CA-AMGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 146 GFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
YS A KVF+ + EK++ +W +I Y+++ L + A+ +++ + +G++PD
Sbjct: 331 TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEF 390
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+L DL + + + GL + + L++ Y+K G +E+A +F+
Sbjct: 391 TFGSLLATSL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERS 447
Query: 266 LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR--PDCFAMVGVLSACARLGALQL 323
L ++++ W+A+I G+ NG P E L+ F + + +R PD + + +LS C +L L
Sbjct: 448 LRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLML 507
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G++ + ++G ALI++Y++CG++
Sbjct: 508 GSQTHAYVLRHGQFKETLIGNALINMYSQCGTI 540
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 149/326 (45%), Gaps = 15/326 (4%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQ-THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
D Y + +L +SF G+ + +FD+ + +WN MI G ++ ++L+ M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
H+ G + F F +L C G +HSLV+K GF V L+ Y C +
Sbjct: 182 HKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 155 RDARKVFD--DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
DA VF+ D+ ++ ++ +I G + +E++ +FR +LE LRP V V+G
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 213 --ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV 270
+CA +G G I ++G + V + MY+ A +VF+ + E+D+
Sbjct: 300 SCSCAAMGHQVHGLAI-----KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDL 354
Query: 271 VCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGL 330
V W+ MI Y L + A+ ++ M ++PD F +L+ L L++ +
Sbjct: 355 VTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQAC 411
Query: 331 MDAEEFLSNPVLGTALIDLYAKCGSM 356
+ S + ALI Y+K G +
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQI 437
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQG--FFPESFTFTF 108
G LLF+++ N WN +I G N +G++ + + + P+++T +
Sbjct: 435 GQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLST 494
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+L C LG H+ V++ G + + L+ YS+CG ++++ +VF+ + EK+
Sbjct: 495 LLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKD 554
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWID 227
V SW +LI YS G E AV+ ++ + + G + PD+A VL AC+ G + G I
Sbjct: 555 VVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIF 614
Query: 228 RYMSE-SGLHRNVFVGTTLVNMYAKCGSMEEAR---RVFDGMLERDVVCWSAMIQGYASN 283
M E G+ RNV + LV++ + G ++EA ++ + + V W A+ A++
Sbjct: 615 NSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAH 674
Query: 284 G---LPREALQLFFEMQKENLRPDCFAMVGVLSACA 316
G L + +L E +K++ P + + + A A
Sbjct: 675 GDLKLGKMVAKLLMEKEKDD--PSVYVQLSNIYAGA 708
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 43/331 (12%)
Query: 64 HNPNTFL-WNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACARLCHFHL 121
N T L N + G+ + + ++L+ +H+ P+ ++ + + L
Sbjct: 16 ENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIF 75
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT-------- 173
G +H +++G + V LL Y + G+L +K FD+I E +V SWT
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 174 ------------------------ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
A+I G ESG E +V+LFR + ++G+R D
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD--GMLE 267
+L C G L G+ + + ++G V L+ MY C + +A VF+ +
Sbjct: 196 ILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 268 RDVVCWSAMIQGYASNGLPR-EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
RD V ++ +I G A G R E+L +F +M + +LRP V V+ +C+ +G++
Sbjct: 255 RDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQ 309
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
GL + ++ A + +Y+ G
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 157/345 (45%), Gaps = 36/345 (10%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
+L+SS FG++ + ++ + N + + + + + Y + + GF P+
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPD 117
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL-------- 154
S+TF ++ + C G H +K G + V+ L+ Y+ CG L
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 155 ----RD-------------------ARKVFDDIPEKNVASWTALICGYSESGLCEEAVDL 191
RD A K+FD++P+KN+ SW +I Y + ++ L
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISL 237
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
FR ++ G + + + LV +L AC R L GR + + + L+ +V + T L++MY K
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK 297
Query: 252 CGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
C + ARR+FD + R+ V W+ MI + +G P L+LF M LRPD VGV
Sbjct: 298 CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGV 357
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
L CAR G + G LM +EF P G + +LY+ G
Sbjct: 358 LCGCARAGLVSQGQSYYSLM-VDEFQIKPNFGHQWCMANLYSSAG 401
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 5/233 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + N WN MI + + I L+ M + GF T +L AC R
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G ++H+ +++T V ++T L+ Y KC + AR++FD + +N +W +I
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSESGLHR 237
+ G E ++LF ++ LRPD V VL CAR G + G+ + + E +
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC----WSAMIQGYASNGLP 286
N + N+Y+ G EEA + + DV W+ ++ G P
Sbjct: 386 NFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNP 438
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 33/264 (12%)
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H+ ++ +G D LL S+ G ++ I + A+ + Y S
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCAN--PVFKAYLVSSS 98
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
++A+ + +L G PDS V ++ + + SG+ + G + + V +
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNS 158
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG-------------------- 284
L++MY CG+++ A+++F + +RD+V W+++I G NG
Sbjct: 159 LMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISW 218
Query: 285 -----------LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
P ++ LF EM + + + +V +L+AC R L+ G +
Sbjct: 219 NIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIR 278
Query: 334 EEFLSNPVLGTALIDLYAKCGSMG 357
S+ V+ TALID+Y KC +G
Sbjct: 279 TFLNSSVVIDTALIDMYGKCKEVG 302
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 156/359 (43%), Gaps = 75/359 (20%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT-L 125
+T ++N MI G N+ + I L+ M +GF P++FTF VL A +
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGH----LRDARKVFDDIPEKNVASWT-------- 173
H+ +K+G V L+ YSKC L ARKVFD+I EK+ SWT
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 174 ------------------------ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
A+I GY G +EA+++ R ++ G+ D
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVF---VGTTLVNMYAKCGSMEEARRVFDGML 266
V+ ACA G L G+ + Y+ L R F +LV++Y KCG +EAR +F+ M
Sbjct: 292 VIRACATAGLLQLGKQVHAYV----LRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 267 ERDVVCWSAMIQGY-------------------------------ASNGLPREALQLFFE 295
+D+V W+A++ GY A NG E L+LF
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M++E P +A G + +CA LGA G + + F S+ G ALI +YAKCG
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 32/301 (10%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+LL N +N MI G V+ + + +++ M G + FT+ V++ACA
Sbjct: 240 ELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATA 299
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
LG +H+ V++ F + L+ Y KCG +AR +F+ +P K++ SW AL+
Sbjct: 300 GLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 177 CGY-------------------------------SESGLCEEAVDLFRGLLEMGLRPDSA 205
GY +E+G EE + LF + G P
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ +CA LG +G+ + + G ++ G L+ MYAKCG +EEAR+VF M
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 266 LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
D V W+A+I +G EA+ ++ EM K+ +RPD ++ VL+AC+ G + G
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 326 R 326
+
Sbjct: 539 K 539
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 5/236 (2%)
Query: 46 SSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFT 105
SS H G KL+F + N W MI G+ +N +G++L+ M ++GF P +
Sbjct: 363 SSGHIGEA---KLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYA 419
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
F+ +K+CA L + G H+ ++K GF + L+ Y+KCG + +AR+VF +P
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR- 224
+ SW ALI + G EAVD++ +L+ G+RPD L+ VL AC+ G + GR
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
+ D + + L+++ + G +A V + + + W A++ G
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 44/259 (16%)
Query: 137 DVFVETGLLGFYSKCGHLRDARKVFDDIPE--KNVASWTALICGYSESGLCEEAVDLFRG 194
D T ++ Y G + AR VF+ P ++ + A+I G+S + A++LF
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMS--ESGLHRNVFVGTTLVNMYAKC 252
+ G +PD+ VL A + D + + + + +SG V LV++Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVAD-DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 253 GS----MEEARRVFDGMLERD--------------------------------VVCWSAM 276
S + AR+VFD +LE+D +V ++AM
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG-LMDAEE 335
I GY + G +EAL++ M + D F V+ ACA G LQLG + ++ E+
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 336 FLSNPVLGTALIDLYAKCG 354
F + +L+ LY KCG
Sbjct: 318 FSFH--FDNSLVSLYYKCG 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS 254
++ G +P + L ++ + +L R + +SE + TT+V+ Y G
Sbjct: 40 IITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVSGYCASGD 95
Query: 255 MEEARRVFDG--MLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
+ AR VF+ + RD V ++AMI G++ N A+ LF +M+ E +PD F VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 313 SACARLGALQ---LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
+ A + + + A L ++++ + AL+ +Y+KC S
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITS--VSNALVSVYSKCAS 199
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 51/360 (14%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S+ R F N + LFD+ + WN +I + + +L+ M
Sbjct: 183 NALISMYKR----FRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWF 238
Query: 97 QGF--------------------------------FPESF---TFTFVLKACARLCHFHL 121
G FP S LKAC+ + L
Sbjct: 239 SGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSE 181
G +H L + + + G V L+ YSKC LR A VF E ++ +W ++I GY++
Sbjct: 299 GKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQ 358
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
EEA L R +L G +P+S L +L CAR+ +L G+ Y+ L R F
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYI----LRRKCFK 414
Query: 242 GTT-----LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
T LV++YAK G + A++V D M +RD V ++++I GY + G AL LF EM
Sbjct: 415 DYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEM 474
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+ ++PD +V VLSAC+ + G R M E+ P L + ++DLY + G
Sbjct: 475 TRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC-EYGIRPCLQHFSCMVDLYGRAG 533
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 36/322 (11%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN +I N+ F + I Y M +G P++FT+ VLKAC G +H +
Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIE 171
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ + ++V L+ Y + ++ AR++FD + E++ SW A+I Y+ G+ EA +
Sbjct: 172 VSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFE 231
Query: 191 LFRGLLEMGLRPD-------------SANLVHVLG----------------------ACA 215
LF + G+ + N V LG AC+
Sbjct: 232 LFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACS 291
Query: 216 RLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
+G + G+ I S V TL+ MY+KC + A VF E + W++
Sbjct: 292 LIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNS 351
Query: 276 MIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG-LMDAE 334
+I GYA EA L EM +P+ + +L CAR+ LQ G ++ +
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 335 EFLSNPVLGTALIDLYAKCGSM 356
F +L +L+D+YAK G +
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKI 433
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+L AC + F G +H+ + +G + L+ FYS +A+ + ++ +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
W LI Y+++ L EE + ++ ++ G+RPD+ VL AC D+ GR +
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPRE 288
+ S +++V L++MY + +M ARR+FD M ERD V W+A+I YAS G+ E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 289 ALQLFFEMQKENLRP-----------------------------------DCFAMVGVLS 313
A +LF +M + D AM+ L
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
AC+ +GA++LG GL + + LI +Y+KC +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDL 331
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 8/268 (2%)
Query: 55 HPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
H ++F QT + WN++I G + + L M GF P S T +L CA
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCA 392
Query: 115 RLCHFHLGHTLHSLVVKTGFVGD-VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
R+ + G H +++ D + L+ Y+K G + A++V D + +++ ++T
Sbjct: 393 RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYT 452
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSE 232
+LI GY G A+ LF+ + G++PD +V VL AC+ + G R + E
Sbjct: 453 SLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCE 512
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV-VCWSAMIQG---YASNGLPRE 288
G+ + + +V++Y + G + +A+ + M + W+ ++ + + + +
Sbjct: 513 YGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKW 572
Query: 289 ALQLFFEMQKENLRPDCFAMVGVLSACA 316
A + EM+ EN P + ++ + A A
Sbjct: 573 AAEKLLEMKPEN--PGYYVLIANMYAAA 598
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%)
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
+L AC + +G + + SG+ + + LV Y+ EA+ + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
+ W+ +I YA N L E + + M + +RPD F VL AC + G G
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSMG 357
++ + S+ + ALI +Y + +MG
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMG 196
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 135/255 (52%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLV 129
++++ + G ++ F +G+ + + F + T+ L+ + L +L +HS +
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
V+ GF +V L+ Y KCG + A++VFDD +N+ T ++ Y + EEA+
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEAL 323
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
+LF + + P+ +L + A L L G + + +SG +V VG LVNMY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
AK GS+E+AR+ F GM RD+V W+ MI G + +GL REAL+ F M P+ +
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 310 GVLSACARLGALQLG 324
GVL AC+ +G ++ G
Sbjct: 444 GVLQACSHIGFVEQG 458
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 5/324 (1%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+Q N L++L ++ T + LFD N W M++G ++ + ++L+ S
Sbjct: 70 YQINSLINLYVKCR----ETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKS 125
Query: 94 MHQQG-FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M G P F T V K+C+ G H +K G + FV L+ YS C
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS 185
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
+A +V DD+P +++ +++ + GY E G +E +D+ R ++ + L
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
+ L DL + M G + V L+NMY KCG + A+RVFD +++
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 273 WSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
+ ++ Y + EAL LF +M + + P+ + +L++ A L L+ G+ GL+
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 333 AEEFLSNPVLGTALIDLYAKCGSM 356
+ ++ ++G AL+++YAK GS+
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSI 389
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 109 VLKACARLCHFHLGHTLHSLVV---KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
+LK CA + +G ++H+ ++ ++ D + L+ Y KC ARK+FD +P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGR 224
E+NV SW A++ GY SG E + LF+ + G RP+ V +C+ G + G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
+ GL + FV TLV MY+ C EA RV D + D+ +S+ + GY G
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
+E L + + E+ + + L + L L L + M F +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 345 ALIDLYAKCGSM 356
ALI++Y KCG +
Sbjct: 277 ALINMYGKCGKV 288
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 207 LVHVLGACARLGDLGSGRWIDRYM---SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
L +L CA L G I ++ ++S + + +L+N+Y KC AR++FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEM-QKENLRPDCFAMVGVLSACARLGALQ 322
M ER+VV W AM++GY ++G E L+LF M RP+ F V +C+ G ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
G + G +S+ + L+ +Y+ C G
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG 188
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N LV++ +S G+ + F + WNTMI G + + ++ + M
Sbjct: 377 NALVNMYAKS----GSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIF 432
Query: 97 QGFFPESFTFTFVLKACARLCHFHLG-HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
G P TF VL+AC+ + G H + L+ K D+ T ++G SK G +
Sbjct: 433 TGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFK 492
Query: 156 DARKVFDDIP-EKNVASWTALI 176
DA P E +V +W L+
Sbjct: 493 DAEDFMRTAPIEWDVVAWRTLL 514
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
Y+ + +L G ++LFD+ +T +WN +I G N D +L+ M QQ
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQ 145
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
GF P + T +L C + G ++H + K+G D V+ L+ FYSKC L A
Sbjct: 146 GFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSA 205
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
+F ++ +K+ SW +I YS+SGL EEA+ +F+ + E + ++++L A
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHV-- 263
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
S + + + G+ ++ V T+LV Y++CG + A R++ + +V ++++
Sbjct: 264 ----SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIV 319
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
YA G A+ F + ++ ++ D A+VG+L C + + +G G
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 338 SNPVLGTALIDLYAK 352
+ ++ LI +Y+K
Sbjct: 380 TKTLVVNGLITMYSK 394
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 148/301 (49%), Gaps = 9/301 (2%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
++LF + + +T WNTMI + + I ++ +M ++ T +L A
Sbjct: 206 EVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA---- 261
Query: 117 CHFHLGH-TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTAL 175
H+ H LH LVVK G V D+ V T L+ YS+CG L A +++ + ++ T++
Sbjct: 262 ---HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ Y+E G + AV F ++ ++ D+ LV +L C + + G + Y +SGL
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
V L+ MY+K +E +F+ + E ++ W+++I G +G A ++F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 296 MQ-KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M L PD + +L+ C++L L LG G F + + TALID+YAKCG
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCG 498
Query: 355 S 355
+
Sbjct: 499 N 499
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 2/235 (0%)
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+L C + H +G +LH +K+G V GL+ YSK + +F+ + E
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 169 VASWTALICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+ SW ++I G +SG A ++F + +L GL PD+ + +L C++L L G+ +
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
Y + FV T L++MYAKCG+ +A VF + W++MI GY+ +GL
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQH 532
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
AL + EM+++ L+PD +GVLSAC G + G M +EF +P L
Sbjct: 533 RALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAM-IKEFGISPTL 586
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 146/288 (50%), Gaps = 8/288 (2%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA-RLCHFHLG-HTLHSL 128
++++++ + + I ++ + + P FT + L+A F L + +
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 129 VVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEA 188
+ K+G V+V+T LL Y K G + A+ +FD++PE++ W ALICGYS +G +A
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 189 VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNM 248
LF +L+ G P + LV++L C + G + GR + ++SGL + V L++
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 249 YAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
Y+KC + A +F M ++ V W+ MI Y+ +GL EA+ +F M ++N+ +
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ +LSA L G+++ + + T+L+ Y++CG +
Sbjct: 256 INLLSAHVSHEPLHCLVVKCGMVN------DISVVTSLVCAYSRCGCL 297
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 50 FGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFFPESFTFTF 108
F + LF+Q WN++I G V + +++H M G P++ T
Sbjct: 395 FDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIAS 454
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
+L C++LC +LG LH ++ F + FV T L+ Y+KCG+ A VF I
Sbjct: 455 LLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPC 514
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
A+W ++I GYS SGL A+ + + E GL+PD + VL AC G + G+ R
Sbjct: 515 TATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFR 574
Query: 229 YM-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
M E G+ + +V + + EA + M ++ D W A++
Sbjct: 575 AMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 189 VDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW----IDRYMSESGLHRNVFVGTT 244
+ +FR LL L P+ + L A S + + ++++SGL R V+V T+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTT--SFNSFKLQVEQVQTHLTKSGLDRFVYVKTS 90
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
L+N+Y K G + A+ +FD M ERD V W+A+I GY+ NG +A +LF M ++ P
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+V +L C + G + G G+ + + ALI Y+KC +G
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELG 203
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGF-FPESFTFTFV 109
G+ +F + HNPN WN++I G +N + +Y + + P+ +TF+
Sbjct: 349 GDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAA 408
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV 169
+ A A F G LH V K G+ VFV T LL Y K A+KVFD + E++V
Sbjct: 409 ISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDV 468
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
WT +I G+S G E AV F + R D +L V+GAC+ + L G
Sbjct: 469 VLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCL 528
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+G + V LV+MY K G E A +F D+ CW++M+ Y+ +G+ +A
Sbjct: 529 AIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
L F ++ + PD + +L+AC+ G+ G
Sbjct: 589 LSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG 623
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 6/321 (1%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHD-GIQLYH 92
+ +N L+S+ +R G+ + +FD+ + N +N + N F L
Sbjct: 133 YANNNLISMYVRC----GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTT 188
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M + P S TFT +++ CA L +G +L+S ++K G+ +V V+T +LG YS CG
Sbjct: 189 HMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
L AR++FD + ++ +W +I G ++ E+ + FR +L G+ P VL
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
C++LG G+ I + S ++ + L++MY CG M EA VF + ++V
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 273 WSAMIQGYASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W+++I G + NG +A+ ++ + + RPD + +SA A G G +
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 332 DAEEFLSNPVLGTALIDLYAK 352
+ + +GT L+ +Y K
Sbjct: 429 TKLGYERSVFVGTTLLSMYFK 449
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 28/340 (8%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
+ +N L+S+ +R S + + +FD+ N I + + + + S
Sbjct: 23 YANNNLISMYVRCS----SLEQARKVFDKMPQRN-------IVTLFGLSAVFEYVSMGSS 71
Query: 94 MHQQGFFPESFTFTFVL-------------KACARLCHFHLGHTLHSLVVKTGF---VGD 137
+H Q SF F + + C + +H+LV+ G
Sbjct: 72 LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATES 131
Query: 138 VFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSES-GLCEEAVDLFRGLL 196
+ L+ Y +CG L ARKVFD +P +NV S+ AL YS + A L +
Sbjct: 132 PYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMA 191
Query: 197 EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
++P+S+ ++ CA L D+ G ++ + + G NV V T+++ MY+ CG +E
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 257 EARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACA 316
ARR+FD + RD V W+ MI G N + L F M + P F VL+ C+
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+LG+ LG + + L++ L AL+D+Y CG M
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDM 351
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 47 SFHFGN--THHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESF 104
S +F N + +FD + LW MI G +Q + M+++ + F
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 105 TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
+ + V+ AC+ + G H L ++TGF + V L+ Y K G A +F
Sbjct: 505 SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLA 564
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR 224
++ W +++ YS+ G+ E+A+ F +LE G PD+ + +L AC+ G G+
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Query: 225 WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
++ M E G+ + +VN+ +K G ++EA + +
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLE-MGLRPDSANLV 208
K G A+KV + ++NV +W +I GY + EEA+ + +L ++P+ +
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
L ACARLGDL +W+ M +SG+ N + + LV++YAKCG + +R VF +
Sbjct: 170 SSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
DV W+AMI G+A++GL EA+++F EM+ E++ PD +G+L+ C+ G L+ G
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 329 GLMDAEEFLSNPVLG--TALIDLYAKCG 354
GLM + F P L A++DL + G
Sbjct: 290 GLM-SRRFSIQPKLEHYGAMVDLLGRAG 316
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 40 VSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QG 98
++L++ S G + K + + N WN MI G V N + + ++ +M
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 99 FFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDAR 158
P F+F L ACARL H +HSL++ +G + + + L+ Y+KCG + +R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 159 KVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
+VF + +V+ W A+I G++ GL EA+ +F + + PDS + +L C+ G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 219 DLGSGRWIDRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAM 276
L G+ MS + + +V++ + G ++EA + + M +E DVV W ++
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 277 IQGYASNGLP 286
+ + P
Sbjct: 341 LSSSRTYKNP 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK-ENLRP 303
++ K G A++V +++V+ W+ MI GY N EAL+ M +++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ F+ L+ACARLG L LM N +L +AL+D+YAKCG +G
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 134/233 (57%)
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSE 181
G LH VVK+G V L+ FYSK D+R+ F+D P+K+ +W+++I +++
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+ L +++ + ++ LRPD L +CA L GR + ++G +VFV
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
G++LV+MYAKCG + AR++FD M +R+VV WS M+ GYA G EAL LF E ENL
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ ++ V+S CA L+LG + GL F S+ +G++L+ LY+KCG
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCG 266
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 143/270 (52%)
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG 146
++ M P+ K+CA L +G ++H L +KTG+ DVFV + L+
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 147 FYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
Y+KCG + ARK+FD++P++NV +W+ ++ GY++ G EEA+ LF+ L L + +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
V+ CA L GR I +S + FVG++LV++Y+KCG E A +VF+ +
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
+++ W+AM++ YA + ++ ++LF M+ ++P+ + VL+AC+ G + G
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 327 AKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
M +L+D+ + G +
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRL 369
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + + +FD+ N W+ M+ G + + L+ + ++F+ V+
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CA LG +H L +K+ F FV + L+ YSKCG A +VF+++P KN+
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
W A++ Y++ ++ ++LF+ + G++P+ ++VL AC+ G + GR+ M
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMI 277
ES + +LV+M + G ++EA V M ++ W A++
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%)
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
+L + AR G + Y+ +SGL V L+N Y+K ++RR F+ ++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
WS++I +A N LP +L+ +M NLRPD + +CA L +G
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 330 LMDAEEFLSNPVLGTALIDLYAKCGSM 356
L + ++ +G++L+D+YAKCG +
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEI 167
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 36/302 (11%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ + +I V + Q + + G P FTF V+ +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRD 108
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD--------------- 163
LG LH +K G +VFV + +L Y K L DAR+ FDD
Sbjct: 109 VKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISG 168
Query: 164 ----------------IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR-PDSAN 206
+PE++V +W A+I G+S++G EEAV+ F +L G+ P+ +
Sbjct: 169 YLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNEST 228
Query: 207 LVHVLGACARLGDLGSGRWIDR-YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ A + + G+G+ I + G NVFV +L++ Y+KCG+ME++ F+ +
Sbjct: 229 FPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKL 288
Query: 266 LE--RDVVCWSAMIQGYASNGLPREALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQ 322
E R++V W++MI GYA NG EA+ +F +M K+ NLRP+ ++GVL AC G +Q
Sbjct: 289 EEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQ 348
Query: 323 LG 324
G
Sbjct: 349 EG 350
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 37/238 (15%)
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+R+A KVFD+IPE +V S TA+I + + EA F+ LL +G+RP+ V+G+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD---------- 263
D+ G+ + Y + GL NVFVG+ ++N Y K ++ +ARR FD
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 264 ---------------------GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
M ER VV W+A+I G++ G EA+ F +M +E +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 303 -PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS---NPVLGTALIDLYAKCGSM 356
P+ ++A + + + G A +FL N + +LI Y+KCG+M
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHAC--AIKFLGKRFNVFVWNSLISFYSKCGNM 278
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 34/269 (12%)
Query: 85 HDGIQLYHSMHQQGFFP-ESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
+ L+ MH P ++ F+ LK+CA LG ++H+ VK+ F+ + FV
Sbjct: 29 EQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCA 88
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLF----------- 192
LL Y KC + ARK+FD+IP++N W A+I Y+ G +EAV+L+
Sbjct: 89 LLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESS 148
Query: 193 ----------------------RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
R ++E +P+ L+ ++ AC+ +G + I Y
Sbjct: 149 FNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYA 208
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREAL 290
+ + + + + LV Y +CGS+ + VFD M +RDVV WS++I YA +G AL
Sbjct: 209 FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESAL 268
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ F EM+ + PD A + VL AC+ G
Sbjct: 269 KTFQEMELAKVTPDDIAFLNVLKACSHAG 297
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 66 PNTFLWNTMIRGMV-DNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
PN +N +I+G+V D + I+ Y M + F P T ++ AC+ + F L
Sbjct: 144 PNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKE 203
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+HS + +++GL+ Y +CG + + VFD + +++V +W++LI Y+ G
Sbjct: 204 IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGD 263
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESGLHRNVFVGT 243
E A+ F+ + + PD ++VL AC+ G + R + GL + +
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYS 323
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVV-CWSAMI---QGYASNGLPREALQLFFEMQKE 299
LV++ ++ G EEA +V M E+ W A++ + Y L A + ++ E
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE 383
Query: 300 NLRPDCFAMVG 310
N P + ++G
Sbjct: 384 N--PANYVLLG 392
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV-LGACARLGDLGSGRWIDRY 229
S T + Y+ G E+A++LF + P A++ + L +CA G + +
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAH 73
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+S N FVG L++MY KC S+ AR++FD + +R+ V W+AMI Y G +EA
Sbjct: 74 SVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEA 133
Query: 290 LQLFFEMQ---------------------------------KENLRPDCFAMVGVLSACA 316
++L+ M + +P+ ++ ++SAC+
Sbjct: 134 VELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 317 RLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+GA +L +P L + L++ Y +CGS+
Sbjct: 194 AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 36/291 (12%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLV 129
++NT+IR + + + L+ M P + TF ++KA G LH
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI------------------------- 164
+K GF+ D FV+T + FY + G L +RK+FDDI
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 165 ------PEKNVASWTALICGYSESGLCEEAVDLFRGLLE---MGLRPDSANLVHVLGACA 215
P +V SWT +I G+S+ GL +A+ +F +++ + P+ A V VL +CA
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 216 RL--GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCW 273
G + G+ I Y+ + +GT L++MY K G +E A +FD + ++ V W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
+A+I ASNG P++AL++F M+ + P+ ++ +L+ACAR + LG
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
K + LI Y +G + ++ LF +L ++P++ ++ A + G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE------------------- 267
+ G + FV T+ V Y + G +E +R++FD +L
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 268 ------------RDVVCWSAMIQGYASNGLPREALQLFFEM---QKENLRPDCFAMVGVL 312
DVV W+ +I G++ GL +AL +F EM ++ + P+ V VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 313 SACARL--GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
S+CA G ++LG + G + ++E + LGTAL+D+Y K G +
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDL 274
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 154/372 (41%), Gaps = 87/372 (23%)
Query: 39 LVSLVLRSSFHFGN---THHPKL--------LFDQTHNPNTFLWNTMIRGMVDN-DCFHD 86
++ + L+ + H N T +PK LF + N WN MI+G DC
Sbjct: 184 VIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC-ES 242
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLK----------------------------------- 111
++++ M ++ F P+ T+T VL
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS 171
CA L + +H V+K GF + L+ Y K G ++DA +F I K + S
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMG-------------------------------- 199
W +LI + ++G +EA+ LF L EM
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 200 -------LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC 252
+ +S + +L CA L L GR I ++ + + N+ V LVNMYAKC
Sbjct: 423 RQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKC 482
Query: 253 GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
G + E VF+ + ++D++ W+++I+GY +G +AL +F M PD A+V VL
Sbjct: 483 GLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVL 542
Query: 313 SACARLGALQLG 324
SAC+ G ++ G
Sbjct: 543 SACSHAGLVEKG 554
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 144/359 (40%), Gaps = 74/359 (20%)
Query: 70 LWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLV 129
LWN++++ V + + + ++LY M Q+G + + +L+AC L F L H+ V
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
++ G ++ V LL Y K G + DA +F ++P +N SW +I G+S+ CE AV
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 190 DLFRGLLEMGLRPDSANLVHVL-----------------------------------GAC 214
+F + +PD VL C
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A L L + Y+ + G + L+++Y K G +++A +F + + + W+
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 275 AMIQGYASNGLPREALQLFFEMQKEN---------------------------------- 300
++I + G EAL LF E+++ N
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 301 -----LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ + + +LS CA L AL LG G + N ++ AL+++YAKCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N W ++I+G D ++ + M S T +L CA L +LG +H
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIH 457
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
V++T ++ V+ L+ Y+KCG L + VF+ I +K++ SW ++I GY G E
Sbjct: 458 GHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAE 517
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLHRNVFVGTTL 245
+A+ +F ++ G PD LV VL AC+ G + GR I MS+ GL +
Sbjct: 518 KALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577
Query: 246 VNMYAKCGSMEEARRVFDGMLERDVVC 272
V++ + G ++EA + M VC
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPMEPKVC 604
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPE---KNVASWTALICGYSESGLCEEAVDLFRGLLEMGL 200
L+ Y++ G L DAR VF+ + ++ W +++ GL E A++L+RG+ + GL
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
D L +L AC LG G R + + GL N+ V L+ +Y K G M +A
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
+F M R+ + W+ MI+G++ A+++F MQ+E +PD VLS ++ G
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 321 LQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + LM N V G AL ++ C +
Sbjct: 275 FEDVLKYFHLMRMS---GNAVSGEALAVFFSVCAEL 307
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 43/310 (13%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LFD N WN MI G N+ + QL+ M ++ F
Sbjct: 216 GKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF----------- 264
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ ++++ TGF+ + + CG +FD +PEKNV
Sbjct: 265 ------------ASWNTMI--TGFIRNREMNKA-------CG-------LFDRMPEKNVI 296
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRY 229
SWT +I GY E+ EEA+++F +L G ++P+ V +L AC+ L L G+ I +
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML--ERDVVCWSAMIQGYASNGLPR 287
+S+S +N V + L+NMY+K G + AR++FD L +RD++ W++MI YA +G +
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR-AKGLMDAEEFLSNPVLGTAL 346
EA++++ +M+K +P + +L AC+ G ++ G K L+ E T L
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCL 476
Query: 347 IDLYAKCGSM 356
+DL + G +
Sbjct: 477 VDLCGRAGRL 486
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
++LF + N WNTMI G + ++L+ M ++ ++ ++KA +
Sbjct: 129 EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQR 184
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
L + + DV T ++ +K G + +AR++FD +PE+N+ SW A+I
Sbjct: 185 GRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMI 240
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
GY+++ +EA LF+ + E
Sbjct: 241 TGYAQNNRIDEADQLFQVMPE--------------------------------------- 261
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
R+ T++ + + M +A +FD M E++V+ W+ MI GY N EAL +F +M
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 297 QKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
++ +++P+ V +LSAC+ L L G + L+ N ++ +AL+++Y+K G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 356 M 356
+
Sbjct: 382 L 382
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 100 FPES--FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
PE T+T V+ +L L V +V T ++ Y + L A
Sbjct: 72 LPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIA 128
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
+F ++PE+NV SW +I GY++SG ++A++LF + E N+V L
Sbjct: 129 EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE-------RNIVSWNSMVKAL 181
Query: 218 GDLGSGRWIDRYMS--ESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA 275
G ID M+ E R+V T +V+ AK G ++EARR+FD M ER+++ W+A
Sbjct: 182 VQRGR---IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA 238
Query: 276 MIQGYASNGLPREALQLFFEMQKENL 301
MI GYA N EA QLF M + +
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDF 264
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
L+G K G + +ARK+FD +PE++V +WT +I GY + G EA +LF + R +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD---RVDSRKN 108
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
++ R L + + M E RNV T+++ YA+ G +++A +FD
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
M ER++V W++M++ G EA+ LF M R D + ++ A+ G +
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDE 220
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
R M +S A+I YA+
Sbjct: 221 ARRLFDCMPERNIIS----WNAMITGYAQ 245
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 136/276 (49%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF +P+ LWN MI G + GI L++ M +G P +T +
Sbjct: 163 LFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSL 222
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+ ++H+ +K +V L+ YS+C + A VF+ I E ++ + ++LI G
Sbjct: 223 LLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITG 282
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
YS G +EA+ LF L G +PD + VLG+CA L D SG+ + Y+ GL +
Sbjct: 283 YSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELD 342
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ V + L++MY+KCG ++ A +F G+ E+++V ++++I G +G A + F E+ +
Sbjct: 343 IKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILE 402
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
L PD +L C G L G M +E
Sbjct: 403 MGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 143/296 (48%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD + FLWN++IR F + L+ + + P++FT+ + + +
Sbjct: 62 LFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFD 121
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
+H + + +G D + ++ YSK G + +A K+F IP+ ++A W +I G
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILG 181
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G ++ ++LF + G +P+ +V + L + + + L +
Sbjct: 182 YGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+VG LVNMY++C + A VF+ + E D+V S++I GY+ G +EAL LF E++
Sbjct: 242 SYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRM 301
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+PDC + VL +CA L G + + + +ALID+Y+KCG
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%)
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSES 182
LHS V K+ D + T L FY+ L ARK+FD PE++V W ++I Y+++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
+ LF +L RPD+ + + D R I SGL + G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ +V Y+K G + EA ++F + + D+ W+ MI GY G + + LF MQ +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
P+C+ MV + S L + S+ +G AL+++Y++C
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 35/332 (10%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + WN ++ + + + ++L+ M G T +L+ C+
Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG 104
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA---- 174
F G +H V++ G +V + L+ YS+ G L +RKVF+ + ++N++SW +
Sbjct: 105 FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
Query: 175 -------------------------------LICGYSESGLCEEAVDLFRGLLEMGLRPD 203
L+ GY+ GL ++A+ + + + GL+P
Sbjct: 165 YTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPS 224
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
++++ +L A A G L G+ I Y+ + L +V+V TTL++MY K G + AR VFD
Sbjct: 225 TSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 264 GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
M +++V W++++ G + L ++A L M+KE ++PD + S A LG +
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
G M + N V TA+ +K G+
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 39/296 (13%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P+ WN+++ G D I + M G P + + + +L+A A H LG
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGL 184
+H +++ DV+VET L+ Y K G+L AR VFD + KN+ +W +L+ G S + L
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
++A L + + G++PD+ +
Sbjct: 307 LKDAEALMIRMEKEGIKPDA-----------------------------------ITWNS 331
Query: 245 LVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
L + YA G E+A V M E+ +VV W+A+ G + NG R AL++F +MQ+E
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 301 LRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ P+ M +L L L G G + + + + TAL+D+Y K G +
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDL 447
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 36/270 (13%)
Query: 121 LGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
LG T+H ++K G D V + +GFY +C L A K+FD++P+++ +W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
SG E+AV+LFR + G + + +V +L C+ GR I Y+ GL NV
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER------------------------------- 268
+ +L+ MY++ G +E +R+VF+ M +R
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 269 ----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
D+V W++++ GYAS GL ++A+ + MQ L+P ++ +L A A G L+LG
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
G + + + + T LID+Y K G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN W + G N F + ++++ M ++G P + T + +LK L H G +
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
H ++ + D +V T L+ Y K G L+ A ++F I K++ASW ++ GY+ G
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESGLHRNVFVGTT 244
EE + F +LE G+ PD+ VL C G + G ++ D S G+ + +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 245 LVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQ 278
+V++ + G ++EA M L+ D W A +
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLS 573
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
D Y+ + ++ G + +++FD N WN+++ G+ D L M
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
++G P++ T+ L Y+ G
Sbjct: 319 KEGIKPDAITWN-----------------------------------SLASGYATLGKPE 343
Query: 156 DARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
A V + EK NV SWTA+ G S++G A+ +F + E G+ P++A + +L
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
L L SG+ + + L + +V T LV+MY K G ++ A +F G+ + +
Sbjct: 404 KILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA 463
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLM 331
W+ M+ GYA G E + F M + + PD VLS C G +Q G + LM
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 12/323 (3%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+DN + ++ G + +FD+ + W TM+ G N+ D +++ M
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
++ ++T +L + L ++ V V ++ + G +
Sbjct: 230 PEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEI 281
Query: 155 RDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC 214
AR+VFD + E+N ASW +I + +G EA+DLF + + G+RP L+ +L C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
A L L G+ + + +V+V + L+ MY KCG + +++ +FD +D++ W+
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 275 AMIQGYASNGLPREALQLFFEMQ-KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
++I GYAS+GL EAL++F EM + +P+ V LSAC+ G ++ G + M++
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 334 EEFLSNPVLG--TALIDLYAKCG 354
F P+ ++D+ + G
Sbjct: 462 -VFGVKPITAHYACMVDMLGRAG 483
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 18/307 (5%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD N W +++G V N L+ M ++ ++T +L
Sbjct: 93 GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN----KVSWTVML 148
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ L+ ++ D T ++ K G + +AR++FD++ E++V
Sbjct: 149 IGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI 204
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID-RY 229
+WT ++ GY ++ ++A +F + E V +G + +GR D
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEK---------TEVSWTSMLMGYVQNGRIEDAEE 255
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
+ E + V +++ + G + +ARRVFD M ER+ W +I+ + NG EA
Sbjct: 256 LFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEA 315
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L LF MQK+ +RP ++ +LS CA L +L G + + +F + + + L+ +
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTM 375
Query: 350 YAKCGSM 356
Y KCG +
Sbjct: 376 YIKCGEL 382
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 77/294 (26%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTF 108
G H + LFD + + WN+M+ G N D +L+ M +
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR----------- 77
Query: 109 VLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN 168
++ GL+ Y K G + +ARKVFD +PE+N
Sbjct: 78 ----------------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 169 VASWTALICGYSESGLCEEAVDLFR---------------GLLEMG----------LRPD 203
V SWTAL+ GY +G + A LF G L+ G + PD
Sbjct: 110 VVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 204 SANLVH---VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
N+ + G C + G + R I MSE R+V TT+V Y + +++AR+
Sbjct: 170 KDNIARTSMIHGLC-KEGRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARK 224
Query: 261 VFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP--DCFAMVGVL 312
+FD M E+ V W++M+ GY NG +A +LF M ++P C AM+ L
Sbjct: 225 IFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKPVIACNAMISGL 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 39/164 (23%)
Query: 149 SKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV 208
S+ G + +ARK+FD K+++SW +++ GY + + +A LF + PD
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PD----- 76
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
RN+ LV+ Y K G ++EAR+VFD M ER
Sbjct: 77 ----------------------------RNIISWNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
+VV W+A+++GY NG A LF++M ++N ++G L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL 152
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
++ G + EAR++FD + + W++M+ GY +N +PR+A +LF EM N+ +
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWN 83
Query: 310 GVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G++S + G + + LM N V TAL+ Y G +
Sbjct: 84 GLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKV 126
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 3/283 (1%)
Query: 35 QDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
QD + ++ + FG +F NT +N ++ G N ++L+ M
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
Q+G F+ T + AC + + +H +K G + ++T LL ++C +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 155 RDARKVFDDIPEK--NVASWTALICGYSESGLCEEAVDLF-RGLLEMGLRPDSANLVHVL 211
DA ++FD P + + T++I GY+ +GL ++AV LF R L E L D +L +L
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
C LG G I Y ++G ++ +G +L++MYAKC ++A ++F+ M E DV+
Sbjct: 529 AVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVI 588
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
W+++I Y EAL L+ M ++ ++PD + V+SA
Sbjct: 589 SWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 39/356 (10%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S L+ G L+F +P + +I G + + ++++ M +
Sbjct: 118 NALISTYLK----LGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRK 173
Query: 97 QGFF-PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK--CGH 153
G P +TF +L AC R+ F LG +H L+VK+GF+ VFV L+ Y K
Sbjct: 174 AGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSS 233
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLG 212
D K+FD+IP+++VASW ++ + G +A DLF + + G DS L +L
Sbjct: 234 CDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLS 293
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVC 272
+C L GR + GL + + V L+ Y+K M++ +++ M+ +D V
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVT 353
Query: 273 WSAMIQGYAS-------------------------------NGLPREALQLFFEMQKENL 301
++ MI Y S NG +AL+LF +M + +
Sbjct: 354 FTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
F++ + AC + ++ + G NP + TAL+D+ +C M
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMA 469
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 150/330 (45%), Gaps = 35/330 (10%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACARLC 117
LFD+ + WNT++ +V H L++ M++ +GF +SFT + +L +C
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC-------------------------- 151
G LH ++ G + ++ V L+GFYSK
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 152 -----GHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
G + A ++F ++ EKN ++ AL+ G+ +G +A+ LF +L+ G+ +
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
L + AC + + I + + G N + T L++M +C M +A +FD
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 267 ER--DVVCWSAMIQGYASNGLPREALQLFFE-MQKENLRPDCFAMVGVLSACARLGALQL 323
+++I GYA NGLP +A+ LF + ++ L D ++ +L+ C LG ++
Sbjct: 480 SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM 539
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
G + + S+ LG +LI +YAKC
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKC 569
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
+G L++ Y K G EA VF + VV ++A+I G++ L EAL++FF M+K
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 301 L-RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
L +P+ + V +L+AC R+ LG + GL+ FL++ + +L+ LY K
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK 228
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 147/322 (45%), Gaps = 64/322 (19%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+FD+ +P+ WN+++ G V + F +GI L+ +H+ FP F+FT L ACARL
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 119 FHLGHTLHSLVV--------------------KTGFVGDVFV------------------ 140
LG +HS +V K GF+ D +
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA 231
Query: 141 --------ETGLLGFYS-----------------KCGHLRDARKVFDDIPEKNVASWTAL 175
E GL F+ K G +A +V D+P N +SW +
Sbjct: 232 SCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTI 291
Query: 176 ICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL 235
+ GY S EA + F + G+R D +L VL A A L + G I + GL
Sbjct: 292 LTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGL 351
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE 295
V V + L++MY+KCG ++ A +F M ++++ W+ MI GYA NG EA++LF +
Sbjct: 352 DSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQ 411
Query: 296 MQKEN-LRPDCFAMVGVLSACA 316
+++E L+PD F + +L+ C+
Sbjct: 412 LKQERFLKPDRFTFLNLLAVCS 433
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 5/220 (2%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P++ +L+ + L LH V K GFV + + L+ FY L DA KV
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
FD++P+ +V SW +L+ GY +SG +E + LF L + P+ + L ACARL
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 221 GSGRWIDRYMSESGLHR-NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQG 279
G I + + GL + NV VG L++MY KCG M++A VF M E+D V W+A++
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ NG L F +M PD ++ A + G
Sbjct: 233 CSRNGKLELGLWFFHQMPN----PDTVTYNELIDAFVKSG 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 8/190 (4%)
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEM---GLRPDSANLVHVLGACARLGDLGSGRWID 227
SW+ ++ + G ++ + R +E+ G +PD++ LVH+L G + R +
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
Y+++ G N + +L+ Y S+E+A +VFD M + DV+ W++++ GY +G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN-RAKGLMDAEEFLSNPVLGTAL 346
E + LF E+ + ++ P+ F+ L+ACARL LG L+ N V+G L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 347 IDLYAKCGSM 356
ID+Y KCG M
Sbjct: 199 IDMYGKCGFM 208
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 154/314 (49%), Gaps = 18/314 (5%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL---KACA 114
L+F + +P+ FL+NT+++ D I ++ + TF FVL A
Sbjct: 65 LVFPRFGHPDKFLFNTLLKCSKPEDSIR--IFANYASKSSLLYLNERTFVFVLGACARSA 122
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDV-FVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
+G +H +V K GF+ + + T LL FY+K G LR ARKVFD++PE+ +W
Sbjct: 123 SSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWN 182
Query: 174 ALICGY---SESGL--CEEAVDLFR--GLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
A+I GY + G +A+ LFR G+RP +V VL A ++ G L G +
Sbjct: 183 AMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLV 242
Query: 227 DRYMSESGL--HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNG 284
Y+ + G +VF+GT LV+MY+KCG + A VF+ M ++V W++M G A NG
Sbjct: 243 HGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNG 302
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG- 343
E L M + ++P+ +LSA +G ++ G M F PV+
Sbjct: 303 RGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKT-RFGVTPVIEH 361
Query: 344 -TALIDLYAKCGSM 356
++DL K G +
Sbjct: 362 YGCIVDLLGKAGRI 375
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 18/281 (6%)
Query: 38 YLVSLVLRSSFHF----GNTHHPKLLFDQTHNPNTFLWNTMIRGMVD-----NDCFHDGI 88
Y L+ + HF G+ + + +FD+ + WN MI G N +
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAM 203
Query: 89 QLYH--SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVG--DVFVETGL 144
L+ S G P T VL A ++ +G +H + K GF DVF+ T L
Sbjct: 204 VLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTAL 263
Query: 145 LGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
+ YSKCG L +A VF+ + KNV +WT++ G + +G E +L + E G++P+
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYM-SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
+L A +G + G + + M + G+ + +V++ K G ++EA +
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 264 GM-LERDVVCWSAMIQG---YASNGLPREALQLFFEMQKEN 300
M ++ D + ++ Y + E + E+++E+
Sbjct: 384 AMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERED 424
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 48/334 (14%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQT--HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM 94
+YL + + + G + LFD+ + W T++ + ++L+ M
Sbjct: 43 SYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM 102
Query: 95 HQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHL 154
++ + + + CA+L H + VK G + V V L+ Y KCG +
Sbjct: 103 RRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLV 162
Query: 155 RDARKVFDDI-------------------------------PEKNVASWTALICGYSESG 183
+ +++F+++ PE+N +WT ++ GY +G
Sbjct: 163 SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAG 222
Query: 184 LCEEAVDLFRGLLEMGLRP----DSANLVHVLGACARLGDLGSGRWIDRY-------MSE 232
E ++L L EM R + L +L ACA+ G+L GRW+ Y M E
Sbjct: 223 FTREVLEL---LAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 233 SGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQL 292
+ +V VGT LV+MYAKCG+++ + VF M +R+VV W+A+ G A +G R + +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 293 FFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
F +M +E ++PD VLSAC+ G + G R
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWR 372
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 43/292 (14%)
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGF--VGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
+L+ CA G LH+++ +G ++ L FY+ G + A+K+FD+IP
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 166 --EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
EK+ WT L+ +S GL ++ LF + + D ++V + G CA+L DLG
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD-------------------- 263
+ + G+ +V V L++MY KCG + E +R+F+
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 264 -----------GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ-KENLRPDCFAMVGV 311
M ER+ V W+ M+ GY G RE L+L EM + + + +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSM 250
Query: 312 LSACARLGALQLGN-------RAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
LSACA+ G L +G + + +M E + ++GTAL+D+YAKCG++
Sbjct: 251 LSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNI 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 9/226 (3%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGF 99
++VL + + + +F + N W M+ G + + ++L M + G
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 100 FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV-------GDVFVETGLLGFYSKCG 152
T +L ACA+ + +G +H +K + DV V T L+ Y+KCG
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 153 HLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
++ + VF + ++NV +W AL G + G +D+F ++ ++PD VL
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR-EVKPDDLTFTAVLS 359
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
AC+ G + G + GL V +V++ + G +EEA
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEA 405
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 5/300 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM--HQQGFFPESFTFTFVLKACARL 116
LFD+ + WN++I G ++ M + GF P TF ++ AC
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H LV+K G + +V V + +Y K G L + K+F+D+ KN+ SW +I
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
+ ++GL E+ + F +G PD A + VL +C +G + + I + G
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
N + T L+++Y+K G +E++ VF + D + W+AM+ YA++G R+A++ F M
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 327
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCG 354
+ PD +L+AC+ G ++ G M ++ + +P L + ++DL + G
Sbjct: 328 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETM-SKRYRIDPRLDHYSCMVDLLGRSG 386
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 129/254 (50%), Gaps = 15/254 (5%)
Query: 110 LKACARLCHFHLGHTLHSLVVKT-----GFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
+K+C + L LH VVK+ GF+GD L+G Y + GH A K+FD++
Sbjct: 41 VKSCVSI---ELCRLLHCKVVKSVSYRHGFIGD-----QLVGCYLRLGHDVCAEKLFDEM 92
Query: 165 PEKNVASWTALICGYSESGLCEEAVDLFRGLL--EMGLRPDSANLVHVLGACARLGDLGS 222
PE+++ SW +LI GYS G + ++ ++ E+G RP+ + ++ AC G
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
GR I + + G+ V V +N Y K G + + ++F+ + +++V W+ MI +
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
NGL + L F ++ PD + VL +C +G ++L GL+ F N +
Sbjct: 213 NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 343 GTALIDLYAKCGSM 356
TAL+DLY+K G +
Sbjct: 273 TTALLDLYSKLGRL 286
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
AN+ ++ A + R + + +S +R+ F+G LV Y + G A ++FD
Sbjct: 32 ANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEM--QKENLRPDCFAMVGVLSACARLGALQ 322
M ERD+V W+++I GY+ G + ++ M + RP+ + ++SAC G+ +
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G GL+ L + A I+ Y K G +
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDL 185
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 41/278 (14%)
Query: 43 VLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
++++ G+ +LLFDQ + +T WNTMI G V D L+ M +
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRD---- 342
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
H+ + +V Y+ G++ AR F+
Sbjct: 343 -------------------AHSWNMMV----------------SGYASVGNVELARHYFE 367
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
PEK+ SW ++I Y ++ +EAVDLF + G +PD L +L A L +L
Sbjct: 368 KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRL 427
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYA 281
G + + + ++ + +V V L+ MY++CG + E+RR+FD M L+R+V+ W+AMI GYA
Sbjct: 428 GMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+G EAL LF M+ + P V VL+ACA G
Sbjct: 487 FHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 9/260 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN + F++T +T WN++I N + + + L+ M+ +G P+ T T +L
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNV 169
A L + LG +H +VVKT + DV V L+ YS+CG + ++R++FD++ ++ V
Sbjct: 417 SASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREV 475
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG--DLGSGRWID 227
+W A+I GY+ G EA++LF + G+ P V VL ACA G D +++
Sbjct: 476 ITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG---YASN 283
MS + + ++LVN+ + G EEA + M E D W A++ Y +
Sbjct: 536 -MMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Query: 284 GLPREALQLFFEMQKENLRP 303
GL A + ++ E+ P
Sbjct: 595 GLAHVAAEAMSRLEPESSTP 614
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 140/352 (39%), Gaps = 63/352 (17%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFT------ 107
+ LFD+ + ++F WNTMI G N + + L+ M ++ S T
Sbjct: 122 EEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
Query: 108 -----------FVLKACARLCHFHLGHTLHSLVVKTGFV------------GDVFVETGL 144
+K + LC G + + + +V V+ L
Sbjct: 182 EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTL 241
Query: 145 LGFYSKCGHLRDARKVFDDIPE---------------KNVASWTALICGYSESGLCEEAV 189
+ Y + G + AR +FD IP+ KNV SW ++I Y + G A
Sbjct: 242 IVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSAR 301
Query: 190 DLF-----RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
LF R + D VHV +R+ D + + +R+
Sbjct: 302 LLFDQMKDRDTISWNTMIDG--YVHV----SRMEDAFA-------LFSEMPNRDAHSWNM 348
Query: 245 LVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
+V+ YA G++E AR F+ E+ V W+++I Y N +EA+ LF M E +PD
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 305 CFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ +LSA L L+LG + ++ PV ALI +Y++CG +
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPV-HNALITMYSRCGEI 459
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 53/318 (16%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +F++ NT WNTMI G V + +L+ M ++ + + +
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV 113
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+C + L + D F ++ Y+K + +A +F+ +PE+N
Sbjct: 114 -SCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRP---------DSANLVHVLGACARLGDLG 221
SW+A+I G+ ++G + AV LFR + P + L + G L
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 222 SGR-------------WIDRYMSESG----------------------LHRNVFVGTTLV 246
SGR + R E+ +NV +++
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
Y K G + AR +FD M +RD + W+ MI GY +A LF EM D
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAH 344
Query: 307 AMVGVLSACARLGALQLG 324
+ ++S A +G ++L
Sbjct: 345 SWNMMVSGYASVGNVELA 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
+ G++ +AR +F+ + +N +W +I GY + +A R L ++ + D
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQA----RKLFDVMPKRDVVTWNT 107
Query: 210 VLGACARLGDLGSGRWID--RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
++ G + R+++ R + + R+ F T+++ YAK + EA +F+ M E
Sbjct: 108 MISGYVSCGGI---RFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPE 164
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
R+ V WSAMI G+ NG A+ LF +M ++ P C + G++
Sbjct: 165 RNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLI 209
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LFD+ + +WN+MI + N + + L+ M +G +S T A + L
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
LH L ++TG VGD + L+ Y+K +L A VF + +++ SW ++
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGL--H 236
+G +++ F+ + G D+ V+ AC+ + +L G + + +SG
Sbjct: 264 CLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPE 323
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+V VG ++++MY+KCG E A VF+ ++ RDV+ +A++ G+A+NG+ EA + +M
Sbjct: 324 AHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM 383
Query: 297 QK-ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV-LGTALIDLYAKCG 354
Q + ++PD +V + S C L + G G E S + + ++ID+Y KCG
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 139/280 (49%), Gaps = 6/280 (2%)
Query: 52 NTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLK 111
N + +F + + WNT++ + N +Q + SM G ++ TF+ V+
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 112 ACARLCHFHLGHTLHSLVVKTGFVGDVFVETG--LLGFYSKCGHLRDARKVFDDIPEKNV 169
AC+ + LG +LH LV+K+G+ + V G ++ YSKCG A VF+++ ++V
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSGRWIDR 228
S A++ G++ +G+ EEA + + + ++PD A +V + C L GR +
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 229 YMSESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
Y + R + V ++++MY KCG +A +F RD+V W++MI ++ NG
Sbjct: 418 YTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 288 EALQLFFEMQKEN--LRPDCFAMVGVLSACARLGALQLGN 325
+A LF E+ E + ++ +L++C +L G
Sbjct: 478 KAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGK 517
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 8/290 (2%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESF-TFTFVLKACARLCHFHLGHTLHSLV 129
WN++I G + + ++ + +M ++G T + A L G H L
Sbjct: 548 WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLA 607
Query: 130 VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAV 189
+K+ D ++ L+ Y +C + A KVF I + N+ SW +I S++ E
Sbjct: 608 IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF 667
Query: 190 DLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMY 249
LFR L L P+ V +L A +LG G ++ G N FV LV+MY
Sbjct: 668 QLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMY 724
Query: 250 AKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN-LRPDCFAM 308
+ CG +E +VF + W+++I + +G+ +A++LF E+ + + P+ +
Sbjct: 725 SSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
+ +LSAC+ G + G M+ E+F PV ++D+ + G +
Sbjct: 785 ISLLSACSHSGFIDEGLSYYKQME-EKFGVKPVTEHRVWIVDMLGRAGKL 833
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 2/233 (0%)
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
++H +K G + D+ + LL FY + G L + +FD++ EK+V W ++I +++G
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
AV LF ++ G DS L+ A + L + E+GL + +
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 244 TLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
L+N+YAK ++ A VF M RD+V W+ ++ +NG PR++LQ F M
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 304 DCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL--SNPVLGTALIDLYAKCG 354
D V+SAC+ + L LG GL+ + ++ +G ++I +Y+KCG
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F +PN WN +I + N + QL+ ++ + P TF +L A +L
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGS 694
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G H +++ GF + FV L+ YS CG L KVF + ++++W ++I
Sbjct: 695 TSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISA 754
Query: 179 YSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLH 236
+ G+ E+A++LF+ L + P+ ++ + +L AC+ G + G + M E G+
Sbjct: 755 HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVK 814
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLE-RDVVCWSAMIQG---YASNGLPREALQL 292
+V+M + G + EA G+ E + W A++ + L +E ++
Sbjct: 815 PVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEV 874
Query: 293 FFEMQKEN 300
FEM+ +N
Sbjct: 875 LFEMEPDN 882
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 23/308 (7%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFV 109
G+T + +F++ + N ++ G N F + + + M P+ T +
Sbjct: 340 GDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSI 399
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVF-VETGLLGFYSKCGHLRDARKVFDDIPEKN 168
C L G +H V+ V ++ Y KCG A +F ++
Sbjct: 400 TSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRD 459
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLL-EMGLRPDS-ANLVHVLGACARLGDLGSGRWI 226
+ SW ++I +S++G +A +LF+ ++ E S + ++ +L +C L G+ +
Sbjct: 460 LVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV 519
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLP 286
++ + G L + + + +M E R D+ W+++I G AS+G
Sbjct: 520 HCWLQKLG---------DLTSAFLRLETMSETR---------DLTSWNSVISGCASSGHH 561
Query: 287 REALQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
E+L+ F M +E +R D ++G +SA LG + G GL + L
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNT 621
Query: 346 LIDLYAKC 353
LI +Y +C
Sbjct: 622 LITMYGRC 629
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S+ R FG + LFD+ + WN +I + + +L M+
Sbjct: 223 NALISMYKR----FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 97 QGFFPESFTFTFV-----------------------------------LKACARLCHFHL 121
G T+ + LKAC+ +
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 122 GHTLHSLVVKT-GFVGDV-FVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G H LV+++ F D+ V L+ YS+C LR A VF + ++++W ++I G+
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ + EE L + +L G P+ L +L AR+G+L G+ Y+ +++
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 240 FV-GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ +LV+MYAK G + A+RVFD M +RD V ++++I GY G AL F +M +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGN 325
++PD MV VLSAC+ ++ G+
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGH 545
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN +I + N F + + +Y M +G + FT+ V+KACA L F G +H +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ +++V L+ Y + G + AR++FD + E++ SW A+I Y+ EA
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 191 LFR-------------------GLLEMG----------------LRPDSANLVHVLGACA 215
L G LE G +R S +++ L AC+
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 216 RLGDLGSGR----WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
+G L G+ + R S S H V +L+ MY++C + A VF + +
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFS--HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG-L 330
W+++I G+A N E L EM P+ + +L AR+G LQ G +
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 331 MDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + + +L +L+D+YAK G +
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEI 475
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 104 FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
++ +L C F G LH+ + +G D + L+ FYS L +A+ + ++
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
+ W LI Y + +E+V +++ ++ G+R D V+ ACA L D G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
R + + S N++V L++MY + G ++ ARR+FD M ERD V W+A+I Y S
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 284 GLPREALQLF-----------------------------------FEMQKENLRPDCFAM 308
EA +L M+ N+R AM
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPV--LGTALIDLYAKCGSM 356
+ L AC+ +GAL+ G L+ S+ + + +LI +Y++C +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+++ R S + H ++F Q + WN++I G N+ + L M
Sbjct: 361 NSLITMYSRCS----DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFV-ETGLLGFYSKCGHLR 155
GF P T +L AR+ + G H +++ D + L+ Y+K G +
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A++VFD + +++ ++T+LI GY G E A+ F+ + G++PD +V VL AC+
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 216 RLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
+ G W+ M G+ + + +V++Y + G +++AR +F
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+S+ R FG + LFD+ + WN +I + + +L M+
Sbjct: 223 NALISMYKR----FGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 97 QGFFPESFTFTFV-----------------------------------LKACARLCHFHL 121
G T+ + LKAC+ +
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 122 GHTLHSLVVKT-GFVGDV-FVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGY 179
G H LV+++ F D+ V L+ YS+C LR A VF + ++++W ++I G+
Sbjct: 339 GKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ + EE L + +L G P+ L +L AR+G+L G+ Y+ +++
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 240 FV-GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+ +LV+MYAK G + A+RVFD M +RD V ++++I GY G AL F +M +
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGN 325
++PD MV VLSAC+ ++ G+
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGH 545
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 42/326 (12%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
WN +I + N F + + +Y M +G + FT+ V+KACA L F G +H +
Sbjct: 152 WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIE 211
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVD 190
+ +++V L+ Y + G + AR++FD + E++ SW A+I Y+ EA
Sbjct: 212 VSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFK 271
Query: 191 LFR-------------------GLLEMG----------------LRPDSANLVHVLGACA 215
L G LE G +R S +++ L AC+
Sbjct: 272 LLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACS 331
Query: 216 RLGDLGSGR----WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
+G L G+ + R S S H V +L+ MY++C + A VF + +
Sbjct: 332 HIGALKWGKVFHCLVIRSCSFS--HDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLS 389
Query: 272 CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG-L 330
W+++I G+A N E L EM P+ + +L AR+G LQ G +
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYI 449
Query: 331 MDAEEFLSNPVLGTALIDLYAKCGSM 356
+ + + +L +L+D+YAK G +
Sbjct: 450 LRRQSYKDCLILWNSLVDMYAKSGEI 475
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 126/290 (43%), Gaps = 37/290 (12%)
Query: 104 FTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
++ +L C F G LH+ + +G D + L+ FYS L +A+ + ++
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 164 IPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
+ W LI Y + +E+V +++ ++ G+R D V+ ACA L D G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
R + + S N++V L++MY + G ++ ARR+FD M ERD V W+A+I Y S
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 284 GLPREALQLF-----------------------------------FEMQKENLRPDCFAM 308
EA +L M+ N+R AM
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPV--LGTALIDLYAKCGSM 356
+ L AC+ +GAL+ G L+ S+ + + +LI +Y++C +
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDL 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+++ R S + H ++F Q + WN++I G N+ + L M
Sbjct: 361 NSLITMYSRCS----DLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLL 416
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFV-ETGLLGFYSKCGHLR 155
GF P T +L AR+ + G H +++ D + L+ Y+K G +
Sbjct: 417 SGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEII 476
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACA 215
A++VFD + +++ ++T+LI GY G E A+ F+ + G++PD +V VL AC+
Sbjct: 477 AAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS 536
Query: 216 RLGDLGSGRWIDRYMSES-GLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
+ G W+ M G+ + + +V++Y + G +++AR +F
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 7/317 (2%)
Query: 41 SLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFF 100
+LVLR F H LFD+ + N+ + + + +D + L+ +H+
Sbjct: 22 NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPD 81
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
S TFT VL AC+ L + G +H+L++K G +T L+ YSK GHL D+ +V
Sbjct: 82 LSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRV 141
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
F+ + EK++ SW AL+ G+ +G +EA+ +F + + L V+ CA L L
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQG 279
G+ + + +G V +GT +++ Y+ G + EA +V++ + + D V +++I G
Sbjct: 202 QQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
N +EA F M ++ RP+ + L+ C+ L +G + + F+S+
Sbjct: 261 CIRNRNYKEA---FLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSD 315
Query: 340 PVLGTALIDLYAKCGSM 356
L L+D+Y KCG +
Sbjct: 316 SKLCNGLMDMYGKCGQI 332
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 147/303 (48%), Gaps = 16/303 (5%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F+ + WN ++ G + N + + ++ +M+++ FT + V+K CA L
Sbjct: 141 VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKI 200
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNVASWTALIC 177
G +H++VV TG V + T ++ FYS G + +A KV++ + + +LI
Sbjct: 201 LQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G + +EA LL RP+ L L C+ DL G+ I +G
Sbjct: 260 GCIRNRNYKEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVS 314
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+ + L++MY KCG + +AR +F + + VV W++MI YA NG +AL++F EM
Sbjct: 315 DSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMC 374
Query: 298 KE--NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA----LIDLYA 351
+E + P+ + V+SACA G ++ G G+M + L V GT ID+ +
Sbjct: 375 EEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRL---VPGTEHYVCFIDILS 431
Query: 352 KCG 354
K G
Sbjct: 432 KAG 434
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 19/228 (8%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ + N++I G + N + + L M +Q P + L C+ +G +H
Sbjct: 250 DEVMLNSLISGCIRNRNYKEAFLL---MSRQR--PNVRVLSSSLAGCSDNSDLWIGKQIH 304
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCE 186
+ ++ GFV D + GL+ Y KCG + AR +F IP K+V SWT++I Y+ +G
Sbjct: 305 CVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGV 364
Query: 187 EAVDLFRGLLE--MGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
+A+++FR + E G+ P+S + V+ ACA G + G+ M E + GT
Sbjct: 365 KALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE---KYRLVPGTE 421
Query: 245 ----LVNMYAKCGSMEEARRVFDGMLERD---VVC--WSAMIQGYASN 283
+++ +K G EE R+ + M+E D + C W A++ + N
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLN 469
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%)
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
G E T+ +L+ C + + G +H+ + GF + +++ LL Y+ G L+ A
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
+F + +++ W A+I GY + GL +E + ++ + + + PD V AC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMI 277
L G+ M + + N+ V + LV+MY KC S + RVFD + R+V+ W+++I
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
GY +G E L+ F +M++E RP+ + VL+AC G + G
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G+ +LF + WN MI G V +G+ +Y+ M Q P+ +TF V
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+AC+ L G H++++K ++ V++ L+ Y KC D +VFD + +NV
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY- 229
+WT+LI GY G E + F + E G RP+ + VL AC G + G W Y
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYS 335
Query: 230 -MSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
+ G+ +V+ + G ++EA
Sbjct: 336 MKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+G +EAV L L GL+ + +L C + + G+ I M G N ++
Sbjct: 89 TGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYL 145
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
L+ +YA G ++ A +F + RD++ W+AMI GY GL +E L ++++M++ +
Sbjct: 146 KVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI 205
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
PD + V AC+ L L+ G RA +M SN ++ +AL+D+Y KC S
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 64/368 (17%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFP-ESFTFTFV 109
G + LFD+ N W MI G F DG L+ M Q+G S T +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 110 LKACARLCHFH-------------------LGHTLHSLVVKTGFVG-------------- 136
KAC + LG++L S+ K G++G
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 137 -----------------------------DVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
D+ T ++ +S G + ++F +PEK
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEK 401
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
+ +WTA+I + +G EEA+ F +L+ + P+S VL A A L DL G I
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPR 287
+ + + ++ V +LV+MY KCG+ +A ++F + E ++V ++ MI GY+ NG +
Sbjct: 462 GRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGK 521
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-KGLMDAEEFLSNPVLGTAL 346
+AL+LF ++ P+ + +LSAC +G + LG + K + + P +
Sbjct: 522 KALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581
Query: 347 IDLYAKCG 354
+DL + G
Sbjct: 582 VDLLGRSG 589
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 20/285 (7%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + W MI V N + + + +H M Q+ P S+TF+ VL A A L
Sbjct: 394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +H VVK V D+ V+ L+ Y KCG+ DA K+F I E N+ S+ +I G
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISG 513
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG--DLGSGRWIDRYMSESGLH 236
YS +G ++A+ LF L G P+ + +L AC +G DLG W +Y
Sbjct: 514 YSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLG---W--KYFKSMKSS 568
Query: 237 RNVFVG----TTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASN---GLPRE 288
N+ G +V++ + G +++A + M + W +++ ++ L
Sbjct: 569 YNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAEL 628
Query: 289 ALQLFFEMQKENLRP-----DCFAMVGVLSACARLGALQLGNRAK 328
A + E++ ++ P ++++G C R+ ++ R K
Sbjct: 629 AAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIK 673
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 134/289 (46%), Gaps = 17/289 (5%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N +++ ++++ G + LF N + TMI G V F + LY
Sbjct: 116 NAMITAMIKNKCDLGKAYE---LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPV 172
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF-VGDVFVETGLLGFYSKCGHLR 155
+ F +S +L + G ++ V G V +V + ++ Y K G +
Sbjct: 173 K--FRDSVASNVLLSG-----YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIV 225
Query: 156 DARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMG-LRPDSANLVHVLGAC 214
DAR +FD + E+NV +WTA+I GY ++G E+ LF + + G ++ +S L + AC
Sbjct: 226 DARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 215 ARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWS 274
G I +S L ++F+G +L++MY+K G M EA+ VF M +D V W+
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRP-----DCFAMVGVLSACARL 318
++I G EA +LF +M +++ F+ G +S C L
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 47/309 (15%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN + +F Q N + W MI +N Q++ M P T ++
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM------PVRVTTSY-- 115
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
+ + + ++K +KC L A ++F DIPEKN
Sbjct: 116 ------------NAMITAMIK-----------------NKC-DLGKAYELFCDIPEKNAV 145
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
S+ +I G+ +G +EA L+ E ++ + +VL + G L +G+W +
Sbjct: 146 SYATMITGFVRAGRFDEAEFLY---AETPVKFRDSVASNVLLS----GYLRAGKWNEAVR 198
Query: 231 SESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREA 289
G+ + V +++V+ Y K G + +AR +FD M ER+V+ W+AMI GY G +
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 290 LQLFFEMQKE-NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
LF M++E +++ + + + AC + G++ GL+ + LG +L+
Sbjct: 259 FGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 349 LYAKCGSMG 357
+Y+K G MG
Sbjct: 319 MYSKLGYMG 327
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 25/333 (7%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N+L+++ + GN + + +FD N W +I G V +G L+ SM
Sbjct: 100 NFLINMYAKC----GNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC---GH 153
F P FT + VL +C + G +H L +K G ++V ++ Y +C
Sbjct: 156 HCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 154 LRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+A VF+ I KN+ +W ++I + L ++A+ +F + G+ D A L+++ +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Query: 214 CARLGDLGSGR------WIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+ DL + +SGL V T L+ +Y++ +E+ + +E
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFME 328
Query: 268 ----RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL 323
RD+V W+ +I +A P A+ LF ++++E L PD + VL ACA L +
Sbjct: 329 MSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 324 GNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ FL++ VL +LI YAKCGS+
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSL 420
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 10/235 (4%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
KL + +H + WN +I D I L+ + Q+ P+ +TF+ VLKACA L
Sbjct: 324 KLFMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
++H+ V+K GF+ D + L+ Y+KCG L +VFDD+ ++V SW +++
Sbjct: 383 VTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSML 442
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM---SES 233
YS G + + +F+ +M + PDSA + +L AC+ G + G I R M E+
Sbjct: 443 KAYSLHGQVDSILPVFQ---KMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPET 499
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPR 287
N + +++M ++ EA V M ++ D V W A++ +G R
Sbjct: 500 LPQLNHY--ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTR 552
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 27/310 (8%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL-- 116
+F+ N WN+MI + I ++ MH G F +L C+ L
Sbjct: 217 VFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYK 273
Query: 117 -----------CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK-CGHLRDARKVFDDI 164
C L HSL VK+G V V T L+ YS+ D K+F ++
Sbjct: 274 SSDLVPNEVSKCCLQL----HSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 165 PE-KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSG 223
+++ +W +I ++ E A+ LF L + L PD VL ACA L
Sbjct: 330 SHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHA 388
Query: 224 RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASN 283
I + + G + + +L++ YAKCGS++ RVFD M RDVV W++M++ Y+ +
Sbjct: 389 LSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLH 448
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRA-KGLMDAEEFLSNPVL 342
G L +F QK ++ PD + +LSAC+ G ++ G R + + + E L
Sbjct: 449 GQVDSILPVF---QKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 343 GTALIDLYAK 352
+ID+ ++
Sbjct: 506 YACVIDMLSR 515
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 141/289 (48%), Gaps = 18/289 (6%)
Query: 75 IRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF 134
+R +V + + L++S + +++ F +ACA + G LH ++ +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALF--QACAEQRNLLDGINLHHHMLSHPY 90
Query: 135 V--GDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLF 192
+V + L+ Y+KCG++ AR+VFD +PE+NV SWTALI GY ++G +E LF
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 193 RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC 252
+L P+ L VL +C G+ + + GLH +++V +++MY +C
Sbjct: 151 SSMLSHCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
Query: 253 ---GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMV 309
+ EA VF+ + +++V W++MI + L ++A+ +F M + + D ++
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
Query: 310 GVLSACARLGALQLGNRAK------GLMDAEEFLSNPVLGTALIDLYAK 352
+ S+ + L +K L ++ + TALI +Y++
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
+NV + L+NMYAKCG++ AR+VFD M ER+VV W+A+I GY G +E LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
P+ F + VL++C + G + GL + + A+I +Y +C
Sbjct: 154 LSHCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRC 205
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 156/308 (50%), Gaps = 46/308 (14%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDC------FHDGIQLYH--SMHQQGFFP-ESFTFTF 108
LL + ++ FL+N ++R + +D +Q H S H + P +SFT+ F
Sbjct: 67 LLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLF 126
Query: 109 VLKACA--RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
+LKA + R LG LH L +K GF V+V+T L+G Y G++ DA KVFD++PE
Sbjct: 127 LLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPE 186
Query: 167 KN-------------------------------VASWTALICGYSESGLCEEAVDLFRGL 195
+N V SWT +I GY+ +EA+ LF +
Sbjct: 187 RNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRM 246
Query: 196 LEM-GLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR-NVFVGTTLVNMYAKCG 253
+ ++P+ ++ +L A LGDL + Y+ + G ++ V +L++ YAKCG
Sbjct: 247 VACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
Query: 254 SMEEARRVFDGML--ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
++ A + F + +++V W+ MI +A +G+ +EA+ +F +M++ L+P+ M+ V
Sbjct: 307 CIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISV 366
Query: 312 LSACARLG 319
L+AC+ G
Sbjct: 367 LNACSHGG 374
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 9/227 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ-QGFFPESFTFTFVLKACARLC 117
++ N W T+I G D + I L+ M P T +L A L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 118 HFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKVFDDIP--EKNVASWTA 174
+ ++H+ V K GFV D+ V L+ Y+KCG ++ A K F +IP KN+ SWT
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY---MS 231
+I ++ G+ +EAV +F+ + +GL+P+ ++ VL AC+ G L +++ + ++
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVN 389
Query: 232 ESGLHRNVFVGTTLVNMYAKCGSMEEARRV-FDGMLERDVVCWSAMI 277
E + +V LV+M + G +EEA ++ + +E V W ++
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD------------------------ 269
G +V+V T LV MY G+M +A +VFD M ER+
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 270 -------VVCWSAMIQGYASNGLPREALQLFFEMQK-ENLRPDCFAMVGVLSACARLGAL 321
VV W+ +I GYA P+EA+ LF M + ++P+ ++ +L A LG L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 322 QLGNRAKGLMDAEEFLSNPVLGT-ALIDLYAKCG 354
++ + F+ + T +LID YAKCG
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCG 306
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 124/226 (54%), Gaps = 6/226 (2%)
Query: 94 MHQQGFFPESF------TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
M + P SF ++ +++A R F G LH+ +V +G + L+ F
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 148 YSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
Y +CG + DARKVFD++P+++++ +I + +G +E++D FR + + GL+ D+ +
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIV 120
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE 267
+L A L D G+ I + + + F+ ++L++MY+K G + AR+VF + E
Sbjct: 121 PSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGE 180
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
+D+V ++AMI GYA+N EAL L +M+ ++PD ++S
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 48/332 (14%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
D ++VS ++ FG + + +F + ++N MI G +N + + L
Sbjct: 149 ESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKD 208
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M G P+ T+ ++ +GF H
Sbjct: 209 MKLLGIKPDVITWNALI---------------------SGF-----------------SH 230
Query: 154 LRDARKVFD-------DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
+R+ KV + D + +V SWT++I G + E+A D F+ +L GL P+SA
Sbjct: 231 MRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
++ +L AC L + G+ I Y +GL + FV + L++MY KCG + EA +F
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 267 ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNR 326
++ V +++MI YA++GL +A++LF +M+ + D +L+AC+ G LG
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 327 AKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
LM ++ P L ++DL + G +
Sbjct: 411 LFLLMQ-NKYRIVPRLEHYACMVDLLGRAGKL 441
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 39/308 (12%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + +FD+ + MI N + + + + M++ G ++F +L
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLL 124
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
KA L G +H LV+K + D F+ + L+ YSK G + +ARKVF D+ E+++
Sbjct: 125 KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV 184
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ A+I GY+ + +EA++L + + +G++PD
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPD--------------------------- 217
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLP 286
V L++ ++ + E+ + + M + DVV W+++I G N
Sbjct: 218 --------VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTAL 346
+A F +M L P+ ++ +L AC L ++ G G + + +AL
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 347 IDLYAKCG 354
+D+Y KCG
Sbjct: 330 LDMYGKCG 337
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 13/246 (5%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+ W ++I G+V N + M G +P S T +L AC L + G
Sbjct: 249 YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
+H V TG FV + LL Y KCG + +A +F P+K ++ ++I Y+ G
Sbjct: 309 EIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHG 368
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG--DLGSGRWI---DRYMSESGLHRN 238
L ++AV+LF + G + D +L AC+ G DLG ++ ++Y L
Sbjct: 369 LADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY 428
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNG---LPREALQLFF 294
+V++ + G + EA + M +E D+ W A++ ++G L R A +
Sbjct: 429 ----ACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLA 484
Query: 295 EMQKEN 300
E++ EN
Sbjct: 485 ELEPEN 490
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%)
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYAS 282
GR + ++ SG+ R + LV Y +CG + +AR+VFD M +RD+ MI A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVL 342
NG +E+L F EM K+ L+ D F + +L A L + G L+ + S+ +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 343 GTALIDLYAKCGSMG 357
++LID+Y+K G +G
Sbjct: 155 VSSLIDMYSKFGEVG 169
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 13/318 (4%)
Query: 44 LRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPES 103
L+ F G ++ LFD+ + WNTMI G+V GI+++ M + P
Sbjct: 77 LKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTE 136
Query: 104 FTFTFV--LKACARLCHFHLGHTLHSLVVKTGFVG-DVFVETGLLGFYSKCGHLRDARKV 160
FTF+ + L C R H G +H + +G ++ V ++ Y + G A V
Sbjct: 137 FTFSILASLVTCVR----H-GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSV 191
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
F + +++V SW LI S+SG E A+D F + EM ++PD + V+ C+ L +L
Sbjct: 192 FLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGY 280
G+ + G N V ++M++KC ++++ ++F + + D V ++MI Y
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 281 ASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQL--GNRAKGLMDAEEFLS 338
+ + +AL+LF +++RPD F VLS+ + A+ L G L+ F
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSLVIKLGFDL 368
Query: 339 NPVLGTALIDLYAKCGSM 356
+ + T+L+++Y K GS+
Sbjct: 369 DTAVATSLMEMYFKTGSV 386
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 39/290 (13%)
Query: 101 PESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV 160
P S F+ ++ L +H+ +++ GFV + L Y K G + +A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 161 FDDIPEKNVASWTALICGYSESGLCEEAVDLF---------------RGLLEMG------ 199
FDDIP+KN +W + G ++G A+DLF GL+ G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 200 ----------LRPD--SANLVHVLGACARLGDLGSGRWIDRYMSESGLHR-NVFVGTTLV 246
+RP + +++ L C R G+ G I SG+ R N+ V +++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAI-----CSGVSRYNLVVWNSVM 176
Query: 247 NMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCF 306
+MY + G + A VF M +RDVV W+ +I + +G AL F+ M++ ++PD +
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEY 236
Query: 307 AMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ V+S C+ L L G +A L FLSN ++ A ID+++KC +
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRL 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + + WN +I D+ + + M + P+ +T + V+ C+ L
Sbjct: 191 VFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRE 250
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G +L +K GF+ + V + +SKC L D+ K+F ++ + + ++I
Sbjct: 251 LSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGS 310
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGAC-ARLGDLGSGRWIDRYMSESGLHR 237
YS E+A+ LF + +RPD VL + A + D G+ + + + G
Sbjct: 311 YSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGAD--VHSLVIKLGFDL 368
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFE-M 296
+ V T+L+ MY K GS++ A VF +D++ W+ +I G A N E+L +F + +
Sbjct: 369 DTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLL 428
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLG 324
++L+PD ++G+L AC G + G
Sbjct: 429 MNQSLKPDRVTLMGILVACCYAGFVNEG 456
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + ++ L N+MI + C D ++L+ Q P+ FTF+ VL + +
Sbjct: 292 LFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVML 351
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
H G +HSLV+K GF D V T L+ Y K G + A VF K++ W +I G
Sbjct: 352 DH-GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 179 YSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GLH 236
+ + E++ +F LL L+PD L+ +L AC G + G I M ++ G++
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
++ + + G + EA+ + D +
Sbjct: 471 PGNEHYACIIELLCRVGMINEAKDIADKI 499
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 142/310 (45%), Gaps = 19/310 (6%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLL----------------FDQTHNPNTFLWNTMIRG 77
++ L SLV++S ++ N +L F+ + WN+++
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 78 MVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGF-VG 136
D D + L+ M G P F L C+R G +H V+K GF V
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS 349
Query: 137 DVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLL 196
+ V++ L+ Y KC + ++ ++ +P N+ +L+ G+ ++ +++F ++
Sbjct: 350 SLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMI 409
Query: 197 EMGLRPDSANLVHVLGACARL--GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS 254
+ G D L VL A + L S + +SG +V V +L++ Y K G
Sbjct: 410 DEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQ 469
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
E +R+VFD + ++ C +++I GYA NG+ + +++ EM + NL PD ++ VLS
Sbjct: 470 NEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSG 529
Query: 315 CARLGALQLG 324
C+ G ++ G
Sbjct: 530 CSHSGLVEEG 539
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 151/312 (48%), Gaps = 10/312 (3%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
GN FD+ + +N +I G C I+LY M G + TF VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD-ARKVFDDIPEKNV 169
C+ G +H V+ GF ++FV + L+G Y+ C L D A K+FD++ ++N+
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDEMLDRNL 178
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEM---GLRPDSANLVHVLGACARLGDLGSGRWI 226
A L+ + ++G E+ LF L M G+ + +++ C+ + G+ +
Sbjct: 179 AVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL 235
Query: 227 DRYMSESGLH-RNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGL 285
+ +SG + N+FV LV+ Y+ CG + + R F+ + E+DV+ W++++ A G
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF-LSNPVLGT 344
++L LF +MQ RP + L+ C+R +Q G + + F +S+ + +
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQS 355
Query: 345 ALIDLYAKCGSM 356
ALID+Y KC +
Sbjct: 356 ALIDMYGKCNGI 367
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 15/258 (5%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
+ LL+ N N+++ ++ D I+++ M +G + T + VLKA
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 114 ARLCHFHLGHTLHSLV------VKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK 167
+ L +LHS +K+G+ DV V L+ Y+K G +RKVFD++
Sbjct: 428 S----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTP 483
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI- 226
N+ T++I GY+ +G+ + V + R + M L PD ++ VL C+ G + G I
Sbjct: 484 NIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIF 543
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR-VFDGMLERDVVCWSAMIQG---YAS 282
D S+ G+ + +V++ + G +E+A R + + D V WS+++Q + +
Sbjct: 544 DSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRN 603
Query: 283 NGLPREALQLFFEMQKEN 300
+ R A ++ ++ EN
Sbjct: 604 ETIGRRAAEVLMNLEPEN 621
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 150 KCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
K G+L A + FD++ ++V ++ LI G S G A++L+ ++ GLR ++
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD 269
VL C+ G + + G N+FV + LV +YA ++ A ++FD ML+R+
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKG 329
+ + +++ + G + +++ M+ E + + ++ C+ + G +
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 330 LMDAEEF-LSNPVLGTALIDLYAKCGSMG 357
L+ + +SN + L+D Y+ CG +
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLS 266
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 111/210 (52%), Gaps = 3/210 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
LF + H+ + W MI G+V N+ F + L M + G P + T++ +L + +
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 119 FHLGHTLHSLVVKTG--FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALI 176
G +H ++ KT + D+ ++ L+ Y+KCG + DA ++F + +K+ SW ++I
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMI 541
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES-GL 235
G S GL ++A++LF+ +L+ G +P+S + VL AC+ G + G + + M E+ +
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 236 HRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ +++++ + G ++EA +
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%), Gaps = 15/286 (5%)
Query: 85 HDG---IQLYHSMHQQGFFPESFTF---TFVLKACARLCHFHLGH----TLHSLVVKTGF 134
HDG L H G + + +F L++C + + +L + +L +
Sbjct: 337 HDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKS 396
Query: 135 VGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRG 194
+ D T ++ Y + G + A +F + +K+ +WT +I G ++ L EA L
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSD 456
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG--LHRNVFVGTTLVNMYAKC 252
++ GL+P ++ +L + +L G+ I ++++ ++ + +LV+MYAKC
Sbjct: 457 MVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKC 516
Query: 253 GSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
G++E+A +F M+++D V W++MI G + +GL +AL LF EM +P+ +GVL
Sbjct: 517 GAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVL 576
Query: 313 SACARLGALQLGNRAKGLMDAEEFLSNPVLG--TALIDLYAKCGSM 356
SAC+ G + G M E + P + ++IDL + G +
Sbjct: 577 SACSHSGLITRGLELFKAMK-ETYSIQPGIDHYISMIDLLGRAGKL 621
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 77/337 (22%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSL--VVKTGFVGDVFVE 141
+ D I Y S +++GF E +L+ RL L H H L + + G + V
Sbjct: 28 YGDKIPNYGS-YRRGFSNEE---ALILR---RLSEGGLVHARHLLDKIPQRGSINRVVYW 80
Query: 142 TGLLGFYSKCGHLRDARKVFDDIPE------------------------------KNVAS 171
T LL Y+K G+L +AR +F+ +PE KNV S
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 172 WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR------- 224
WT ++ + G E+AV+LF + E + + ++ R GD+ +
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 225 ------W---IDRYMSESGLH-----------RNVFVGTTLVNMYAKCGSMEEARRVFDG 264
W I Y+ G+ +NV T++V Y + G + EA R+F
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCE 256
Query: 265 MLERDVVCWSAMIQGYASNGLPREALQLFFEMQK--ENLRPDCFAMVGVLSACARLGA-- 320
M ER++V W+AMI G+A N L REAL LF EM+K + + P+ ++ + AC LG
Sbjct: 257 MPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEF 316
Query: 321 LQLGNR--AKGLMDAEEFLS-NPVLGTALIDLYAKCG 354
+LG + A+ + + E + + L +L+ +YA G
Sbjct: 317 RRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSG 353
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 151/379 (39%), Gaps = 84/379 (22%)
Query: 51 GNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL 110
G + LFD+ N WNT++ G++ N Q++ +M + + ++ ++
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMI 207
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
K + G L+ +V T ++ Y + G +R+A ++F ++PE+N+
Sbjct: 208 KGYIE----NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEM-----GLRPDSANLVHVLGACARLG------- 218
SWTA+I G++ + L EA+ LF LEM + P+ L+ + AC LG
Sbjct: 264 SWTAMISGFAWNELYREALMLF---LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLG 320
Query: 219 -----DLGSGRWI----DRYMSESGLHRNVFVG------------------TTLVNMYAK 251
+ S W D +++S +H G ++N Y K
Sbjct: 321 EQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLK 380
Query: 252 CGSMEEARRVF----------------DGMLE----------------RDVVCWSAMIQG 279
G +E A +F DG LE +D V W+ MI G
Sbjct: 381 NGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISG 440
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
N L EA L +M + L+P +LS+ L G ++ +
Sbjct: 441 LVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYD 500
Query: 340 P--VLGTALIDLYAKCGSM 356
P +L +L+ +YAKCG++
Sbjct: 501 PDLILQNSLVSMYAKCGAI 519
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 8/254 (3%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM---HQQGFFP-ESFTFTFVLKA 112
+ +FD+ + + W + G ++ + D L+ SM Q+G F S+ VLKA
Sbjct: 143 RQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKA 202
Query: 113 CARLCHFHLGHTLHSLVVKTGFVG--DVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA 170
CA + F LG +H+L K GF+ D ++ L+ FY + L DA V + N
Sbjct: 203 CAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTV 262
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLG-SGRWIDRY 229
+W A + G +E + F + G++ + + +VL AC+ + D G SG+ +
Sbjct: 263 AWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHAN 322
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML-ERDVVCWSAMIQGYASNGLPRE 288
+ G + + L+ MY K G +++A +VF E V CW+AM+ Y NG+ E
Sbjct: 323 AIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIE 382
Query: 289 ALQLFFEMQKENLR 302
A++L ++M+ ++
Sbjct: 383 AIKLLYQMKATGIK 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 13 LKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWN 72
++ F K H +D+YL ++R F L+ Q N NT W
Sbjct: 206 IRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWA 265
Query: 73 TMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF-HLGHTLHSLVVK 131
+ F + I+ + M G F+ VLKAC+ + G +H+ +K
Sbjct: 266 AKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIK 325
Query: 132 TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKNVASWTALICGYSESGLCEEAVD 190
GF D + L+ Y K G ++DA KVF E +V+ W A++ Y ++G+ EA+
Sbjct: 326 LGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIK 385
Query: 191 LFRGLLEMGLR 201
L + G++
Sbjct: 386 LLYQMKATGIK 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 13/261 (4%)
Query: 106 FTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP 165
++ + K AR H L ++K+ + LL + CG L R++FD +P
Sbjct: 91 YSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMP 150
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEM----GLRPDSANLVHVLGACARLGDLG 221
++ SW + G E G E+A LF +L+ + S L VL ACA + D
Sbjct: 151 HRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFE 210
Query: 222 SGRWIDRYMSESGL--HRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQG 279
G+ + + G + ++ +L+ Y + +E+A V + + V W+A +
Sbjct: 211 LGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTN 270
Query: 280 YASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEE---- 335
G +E ++ F EM ++ + VL AC+ + G R+ + A
Sbjct: 271 DYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSD---GGRSGQQVHANAIKLG 327
Query: 336 FLSNPVLGTALIDLYAKCGSM 356
F S+ ++ LI++Y K G +
Sbjct: 328 FESDCLIRCRLIEMYGKYGKV 348
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 15/303 (4%)
Query: 66 PNTFLWNTMI----RGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL 121
PN +N +I +G ++ F + + M + G P+ TF +L C+R +
Sbjct: 301 PNLVTYNAVIDACGKGGME---FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALIC 177
L + DVF LL K G + A ++ +P K NV S++ +I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G++++G +EA++LF + +G+ D + +L ++G I R M+ G+ +
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLF 293
+V L+ Y K G +E ++VF M V + +S +I GY+ GL +EA+++F
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 294 FEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
E + LR D ++ A + G + M E N V ++ID + +
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 354 GSM 356
+M
Sbjct: 598 ATM 600
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 132/307 (42%), Gaps = 32/307 (10%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN ++T+I G F + + L+ M G + ++ +L ++ +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ G DV LLG Y K G + +KVF ++ + N+ +++ LI GYS+
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
GL +EA+++FR GLR D ++ A + G +GS + M++ G+ NV
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 242 GTTLVNMYAKCGSMEEARRVFDG------------MLERD---VVCWSAMIQGYASNGLP 286
++++ + + +M+ + +G + E + V+ + ++N
Sbjct: 587 YNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTT 646
Query: 287 RE----------ALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
++ L++F +M + ++P+ +L+AC+R + + A L++
Sbjct: 647 KDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFE---DASMLLEELRL 703
Query: 337 LSNPVLG 343
N V G
Sbjct: 704 FDNKVYG 710
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 11/223 (4%)
Query: 142 TGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLCEEAVDLFRGLLE 197
+ ++ + G + A+++F+ V +++ALI Y SGL EEA+ +F + E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 198 MGLRPDSANLVHVLGACARLGD--LGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSM 255
GLRP+ V+ AC + G ++ D M +G+ + +L+ + ++ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE-MQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 256 EEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGV 311
E AR +FD M +E+DV ++ ++ G A ++ +M + + P+ + V
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 312 LSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ A+ G G M + V L+ +Y K G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
L M G P+++T+ ++ C R + + GF D LL Y
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 150 KCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
K ++A KV +++ ++ ++ +LI Y+ G+ +EA++L + E G +PD
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+L R G + S I M +G N+ + MY G E ++FD +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 266 ----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL 321
L D+V W+ ++ + NG+ E +F EM++ P+ ++SA +R G+
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 322 Q 322
+
Sbjct: 506 E 506
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/318 (17%), Positives = 132/318 (41%), Gaps = 15/318 (4%)
Query: 50 FGNTHHPK----LLFDQTHN---PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
+G +H PK +L + N P+ +N++I + + ++L + M ++G P+
Sbjct: 324 YGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD 383
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
FT+T +L R ++ + G ++ + Y G + K+FD
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 163 DIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLG 218
+I ++ +W L+ + ++G+ E +F+ + G P+ ++ A +R G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 219 DLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF----DGMLERDVVCWS 274
+ R M ++G+ ++ T++ A+ G E++ +V DG + + + +
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 275 AMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAE 334
+++ YA+ L E+ + P + ++ C++ L RA +
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 335 EFLSNPVLGTALIDLYAK 352
F + +++ +Y +
Sbjct: 624 GFSPDITTLNSMVSIYGR 641
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 117/296 (39%), Gaps = 47/296 (15%)
Query: 59 LFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
+FD+ + +P+ WNT++ N + ++ M + GF PE TF ++ A +
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVA 170
R F T++ ++ G D+ +L ++ G + KV ++ + N
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 171 SWTALICGYSE---------------SGLCE--------------------EAVDLFRGL 195
++ +L+ Y+ SG+ E EA F L
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 196 LEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC--- 252
E G PD L ++ R + + YM E G ++ +L+ M+++
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 253 GSMEEA-RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFA 307
G EE R + ++ D++ ++ +I Y N R+A ++F EM+ + PD
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVIT 736
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 10/277 (3%)
Query: 37 NYLVSLVLR-SSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMH 95
N L+S R SF T + ++L D P+ +NT++ + + ++ M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 96 QQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLR 155
P T+ +L A A L H+L V + L+ SKC L
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 156 DARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVL 211
+A + F ++ E+ ++ + +++ Y + +A + + E G P A ++
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 212 GACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LE 267
+R D G I R + G+ ++ T++ Y + M +A R+F M +
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 268 RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
DV+ ++ I YA++ + EA+ + M K RP+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 133 GFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLC-EE 187
GF DV+ T L+ ++ G R+A VF + E + ++ ++ + + G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 188 AVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVN 247
L + G+ PD+ ++ C R + M +G + L++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 248 MYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
+Y K +EA +V + M+ +V ++++I YA +G+ EA++L +M ++ +P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 304 DCFAMVGVLSACARLGALQ 322
D F +LS R G ++
Sbjct: 383 DVFTYTTLLSGFERAGKVE 401
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
++ K G + A +F+ + E +V S+T+LI ++ SG EAV++F+ + E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 200 LRPDSANLVHVLGACARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
+P +L ++G + + M G+ + + TL+ + +EA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 259 RRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+VF+ M D V ++A++ Y + P+EA+++ EM P ++SA
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
AR G L K M + + T L+ + + G +
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 44/312 (14%)
Query: 54 HHPKLLFD-QTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKA 112
HH LL + + + P+ ++T++ G +L M ++G P S+ + ++
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA-- 170
R+C S +++ G + D V T L+ + K G +R A K F ++ +++
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 171 --SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
++TA+I G+ + G EA LF + GL PDS
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--------------------- 424
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNG 284
T L+N Y K G M++A RV + M++ +VV ++ +I G G
Sbjct: 425 --------------TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
A +L EM K L+P+ F +++ + G ++ + G +A ++ V T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 345 ALIDLYAKCGSM 356
L+D Y K G M
Sbjct: 531 TLMDAYCKSGEM 542
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF-HLGHT 124
P+T ++ T+I G + ++ MH + P+ T+T ++ ++ G
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYS 180
H + K G D T L+ Y K GH++DA +V + + + NV ++T LI G
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+ G + A +L + ++GL+P+ ++ + G++ + +GL+ +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEM 296
TTL++ Y K G M++A+ + M L+ +V ++ ++ G+ +G+ + +L M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 297 QKENLRPD 304
+ + P+
Sbjct: 588 LAKGIAPN 595
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 8/214 (3%)
Query: 151 CGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
C A VF + PE NVAS+ +I + G +EA L + G PD +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
V+ R G+L + M GL N ++ +++ + + + EA F M+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 267 ER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
+ D V ++ +I G+ G R A + F+EM ++ PD ++S ++G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ M + + V T LI+ Y K G M
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + P++ + +I G D ++++ M Q G P T+T ++ +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTA 174
+ L + K G ++F ++ K G++ +A K+ + + ++T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
L+ Y +SG ++A ++ + +L GL+P ++ G L G + +M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREAL 290
+ N +LV Y +++ A ++ M R D + +++G+ +EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 291 QLFFEMQ 297
LF EM+
Sbjct: 652 FLFQEMK 658
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/244 (17%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
PN F +N+++ G+ + + ++L G ++ T+T ++ A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYS 180
+ ++ G + L+ + G L D K+ + + K +A ++ +L+ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+ A +++ + G+ PD +++ + ++ ++ + M G +V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
+ L+ + K EAR VFD M +G A++ +E F + + +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRR----------EGLAAD---KEIFDFFSDTKYKG 714
Query: 301 LRPD 304
RPD
Sbjct: 715 KRPD 718
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 44/312 (14%)
Query: 54 HHPKLLFD-QTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKA 112
HH LL + + + P+ ++T++ G +L M ++G P S+ + ++
Sbjct: 266 HHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGL 325
Query: 113 CARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA-- 170
R+C S +++ G + D V T L+ + K G +R A K F ++ +++
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 171 --SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
++TA+I G+ + G EA LF + GL PDS
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--------------------- 424
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNG 284
T L+N Y K G M++A RV + M++ +VV ++ +I G G
Sbjct: 425 --------------TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
A +L EM K L+P+ F +++ + G ++ + G +A ++ V T
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 345 ALIDLYAKCGSM 356
L+D Y K G M
Sbjct: 531 TLMDAYCKSGEM 542
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF-HLGHT 124
P+T ++ T+I G + ++ MH + P+ T+T ++ ++ G
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYS 180
H + K G D T L+ Y K GH++DA +V + + + NV ++T LI G
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+ G + A +L + ++GL+P+ ++ + G++ + +GL+ +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEM 296
TTL++ Y K G M++A+ + M L+ +V ++ ++ G+ +G+ + +L M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 297 QKENLRPD 304
+ + P+
Sbjct: 588 LAKGIAPN 595
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 8/214 (3%)
Query: 151 CGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
C A VF + PE NVAS+ +I + G +EA L + G PD +
Sbjct: 224 CYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVIS 283
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML 266
V+ R G+L + M GL N ++ +++ + + + EA F M+
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI 343
Query: 267 ER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
+ D V ++ +I G+ G R A + F+EM ++ PD ++S ++G +
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 323 LGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ M + + V T LI+ Y K G M
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + P++ + +I G D ++++ M Q G P T+T ++ +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTA 174
+ L + K G ++F ++ K G++ +A K+ + + ++T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
L+ Y +SG ++A ++ + +L GL+P ++ G L G + +M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREAL 290
+ N +LV Y +++ A ++ M R D + +++G+ +EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 291 QLFFEMQ 297
LF EM+
Sbjct: 652 FLFQEMK 658
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/244 (17%), Positives = 98/244 (40%), Gaps = 17/244 (6%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
PN F +N+++ G+ + + ++L G ++ T+T ++ A +
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYS 180
+ ++ G + L+ + G L D K+ + + K +A ++ +L+ Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+ A +++ + G+ PD +++ + ++ ++ + M G +V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
+ L+ + K EAR VFD M +G A++ +E F + + +
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRR----------EGLAAD---KEIFDFFSDTKYKG 714
Query: 301 LRPD 304
RPD
Sbjct: 715 KRPD 718
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 10/293 (3%)
Query: 39 LVSLVLRSSFHFGNTHHP-KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQ 97
L+ L++S FG+ K + +Q P+ F +N++I G+ + M +
Sbjct: 458 LIKTFLQNS-RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 98 GFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA 157
G P +FT+ + F + + G + + + TGL+ Y K G + +A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 158 RKVFDDIPEKNV----ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
+ + ++ + ++T L+ G ++ ++A ++FR + G+ PD + ++
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERD 269
++LG++ I M E GL NV + L+ + + G +E+A+ + D M L +
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
V + +I GY +G EA +LF EM+ + L PD F ++ C RL ++
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 23/278 (8%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ DQ + + ++ G+ ND D +++ M +G P+ F++ ++ ++L +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
++ +V+ G +V + LLG + + G + A+++ D++ K N ++
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
+I GY +SG EA LF + GL PDS ++ C RL D ++R ++ G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND------VERAITIFG 756
Query: 235 LHRNVFVGTT-----LVNMYAKCGSMEEA----RRVFDGMLER----DVVCWSAMIQGYA 281
++ +T L+N K G E R+ DG +R + V ++ MI
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
G A +LF +MQ NL P +L+ ++G
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 134/318 (42%), Gaps = 12/318 (3%)
Query: 51 GNTHHPKLLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
G K LFD P + ++I G G +L M ++ +T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
V+K + + ++ +G +V + T L+ + + DA +V ++ E
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE 480
Query: 167 KNVAS----WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ +A + +LI G S++ +EA ++E GL+P++ + + S
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQ 278
+ M E G+ N + T L+N Y K G + EA + M+++ D ++ ++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
G N +A ++F EM+ + + PD F+ +++ ++LG +Q + M E
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 339 NPVLGTALIDLYAKCGSM 356
N ++ L+ + + G +
Sbjct: 661 NVIIYNMLLGGFCRSGEI 678
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 20/320 (6%)
Query: 49 HFGNTHHPKLLFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESF 104
GN +FD+ PN ++N ++ G + +L M +G P +
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 105 TFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI 164
T+ ++ + L + G V D FV T L+ + + A +F
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN 758
Query: 165 PE---KNVASWTALICGYSESGLCEEAVDLFRGLLEMGL----RPDSANLVHVLGACARL 217
+ + A + ALI + G E ++ L++ +P+ ++ +
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCW 273
G+L + + + M + L V T+L+N Y K G E VFD +E D + +
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPD-CFAMV----GVLSACARLGALQLGNRAK 328
S +I + G+ +AL L +M +N D C + +LS A++G +++ +
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Query: 329 GLMDAEEFLSNPVLGTALID 348
M +++ + LI+
Sbjct: 939 ENMVRLQYIPDSATVIELIN 958
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 18/282 (6%)
Query: 51 GNTHHPKLLFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
GNT +F + P T +N MI + +LY M P T+
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP- 165
T ++ A AR + + + G DV+V L+ YS+ G+ A ++F +
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 166 ---EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
E + AS+ ++ Y +GL +A +F + +G+ P + + +L A ++ D+
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF----DGMLERDVVCWSAMIQ 278
I + MSE+G+ + FV +++N+Y + G + ++ +G D+ ++ +I
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
Y G +LF E++++N RPD V++ +R+GA
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRPD------VVTWTSRIGA 540
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ + F P+ F ++ A + + +L+ ++++ +V L+ Y G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 154 LRDARKVFDDIPEKNVASWTALICGYS--------ESGLCEEAVDLFRGLLEMGLRP--D 203
+ A V ++ +V+ T + Y+ G EEA+D+F+ + +P +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
+ NL+ L A + + + M N+ T LVN +A+ G E+A +F+
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCE--MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 345
Query: 264 GM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ LE DV ++A+++ Y+ G P A ++F MQ PD + ++ A R G
Sbjct: 346 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 166 EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
+ N+ ++TAL+ ++ GLCE+A ++F L E GL PD ++ + +R G
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA----MIQGYA 281
I M G + +V+ Y + G +A VF+ M + ++ Y+
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
+ + EM + + PD F + +L+ RLG + M+ ++
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 342 LGTALIDLYAKCG 354
LI++Y K G
Sbjct: 498 TYNILINIYGKAG 510
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
+ M + G P++F +L RL F + + + D+ L+ Y
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 150 KCGHLRDARKVFDDIPEKN----VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
K G L ++F ++ EKN V +WT+ I YS L + +++F +++ G PD
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 567
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
+L AC+ + + R M H+ V V + + + AK
Sbjct: 568 TAKVLLSACSSEEQVEQVTSVLRTM-----HKGVTVSSLVPKLMAK 608
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 18/282 (6%)
Query: 51 GNTHHPKLLFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
GNT +F + P T +N MI + +LY M P T+
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP- 165
T ++ A AR + + + G DV+V L+ YS+ G+ A ++F +
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 166 ---EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
E + AS+ ++ Y +GL +A +F + +G+ P + + +L A ++ D+
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF----DGMLERDVVCWSAMIQ 278
I + MSE+G+ + FV +++N+Y + G + ++ +G D+ ++ +I
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
Y G +LF E++++N RPD V++ +R+GA
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRPD------VVTWTSRIGA 518
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 16/240 (6%)
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
+ + F P+ F ++ A + + +L+ ++++ +V L+ Y G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 154 LRDARKVFDDIPEKNVASWTALICGYS--------ESGLCEEAVDLFRGLLEMGLRP--D 203
+ A V ++ +V+ T + Y+ G EEA+D+F+ + +P +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
+ NL+ L A + + + M N+ T LVN +A+ G E+A +F+
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCE--MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFE 323
Query: 264 GM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ LE DV ++A+++ Y+ G P A ++F MQ PD + ++ A R G
Sbjct: 324 QLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
N+ ++TAL+ ++ GLCE+A ++F L E GL PD ++ + +R G I
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSA----MIQGYASN 283
M G + +V+ Y + G +A VF+ M + ++ Y+
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKA 417
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
+ + EM + + PD F + +L+ RLG + M+ ++
Sbjct: 418 RDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTY 477
Query: 344 TALIDLYAKCG 354
LI++Y K G
Sbjct: 478 NILINIYGKAG 488
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
+ M + G P++F +L RL F + + + D+ L+ Y
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 150 KCGHLRDARKVFDDIPEKN----VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
K G L ++F ++ EKN V +WT+ I YS L + +++F +++ G PD
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
+L AC+ + + R M H+ V V + + + AK
Sbjct: 546 TAKVLLSACSSEEQVEQVTSVLRTM-----HKGVTVSSLVPKLMAK 586
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 15/274 (5%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
+L+ + +PNT +N +I+G ++ H + + + M ++ P+ T+ ++ R
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASW 172
+F + L SL+ G V D + T ++ K + +A +FD + +K NV +
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN---LVHVLGACARLGDLGSGRWIDRY 229
TALI GY ++G +EA + +L P+S L+H G CA G L ++
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH--GLCAD-GKLKEATLLEEK 592
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGL 285
M + GL V T L++ K G + A F ML + D ++ IQ Y G
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+A + +M++ + PD F ++ LG
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 9/265 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P + +I+ + ++ + + L M + G P T+T ++ + C F L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+++ G + +V L+ Y K G + DA V + + + N ++ LI GY +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
S + +A+ + +LE + PD ++ R G+ S + M++ GL + +
Sbjct: 441 SNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
T++++ K +EEA +FD + ++ +VV ++A+I GY G EA + +M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 298 KENLRPDCFAMVGVLSACARLGALQ 322
+N P+ ++ G L+
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLK 584
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+NT++ + + Q+Y M + P +T+ ++ +L + + S +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCE 186
+ G D F T L+ Y + L A KVF+++P +N ++T LI G + +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EA+DLF + + P ++ + + + M E+G+ N+ T L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 247 NMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ E+AR + MLE+ +V+ ++A+I GY G+ +A+ + M+ L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 303 PD 304
P+
Sbjct: 426 PN 427
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 11/296 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFT-FVLKACARLCHFHLGHT 124
PN + +N M+ G + Q + + G P+ FT+T ++ C R
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF----DDIPEKNVASWTALICGYS 180
+ + +K G + T L+ + +A +F DD V ++T LI
Sbjct: 276 FNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
S EA++L + + E G++P+ ++ + R + M E GL NV
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEM 296
L+N Y K G +E+A V + M R + ++ +I+GY + + +A+ + +M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKM 453
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+ + PD ++ R G R LM+ + + T++ID K
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 10/220 (4%)
Query: 144 LLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
LL ++ G + + ++V+ ++ E N+ ++ ++ GY + G EEA ++E G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 200 LRPDSANLVH-VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
L PD ++G C R DL S + M G RN T L++ ++EA
Sbjct: 249 LDPDFFTYTSLIMGYCQR-KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEA 307
Query: 259 RRVFDGMLERD----VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+F M + + V ++ +I+ + EAL L EM++ ++P+ ++ +
Sbjct: 308 MDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ G M + + N + ALI+ Y K G
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
+ D I+L +G P+ F + ++CA L +H +++ F GD +
Sbjct: 221 YKDAIELL----DKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 144 LLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
++ + +C + DA++VFD + +K++ SW ++C YS++G+ ++A+ LF + + GL+P+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 204 SANLVHVLGACARLGDLGSG-RWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR-V 261
+ V ACA +G + D +E G+ ++ + KCG + EA + +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 262 FDGMLERDVVCWSAM 276
D E W AM
Sbjct: 397 RDLPFEPTADFWEAM 411
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%)
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGS 254
LL+ G PD V + +CA L L + + + +S + + +++M+ +C S
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 255 MEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+ +A+RVFD M+++D+ W M+ Y+ NG+ +AL LF EM K L+P+ + V A
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 346
Query: 315 CARLGALQ 322
CA +G ++
Sbjct: 347 CATVGGIE 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K +FD + + W+ M+ DN D + L+ M + G P TF V ACA +
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 117 -------CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP-EKN 168
HF H + KT G+LG KCGHL +A + D+P E
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHY------LGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 169 VASWTAL 175
W A+
Sbjct: 405 ADFWEAM 411
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+N MI+ + L+ M QG +P+ T+ + + A + + + ++
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS----WTALICGYSESGLCE 186
+G ++ Y + G L DA +++ + + V + +LI G++ESG+ E
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EA+ FR + E G++ + L ++ A +++G L R + M +S +V +++
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 247 NMYAKCGSMEEARRVFDGMLER---DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRP 303
++ A G + EA +F+ + E+ DV+ ++ M+ Y G+ EA+++ EM++ L
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 304 DCFAMVGVLSACARLGAL 321
DC + V++ A G L
Sbjct: 758 DCTSFNQVMACYAADGQL 775
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 20/256 (7%)
Query: 108 FVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGL-----LGFYSKCGHLRDARKVFD 162
V++A A F L L S + V DV+ E GL FY K R+ +
Sbjct: 460 LVVQAKALFERFQLDCVLSSTTLAA--VIDVYAEKGLWVEAETVFYGK----RNMSGQRN 513
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
D+ E NV +I Y ++ L E+A+ LF+G+ G PD + A + +
Sbjct: 514 DVLEYNV-----MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE 568
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQ 278
+ I M +SG ++ Y + G + +A +++ M + V V + ++I
Sbjct: 569 AQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLIN 628
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
G+A +G+ EA+Q F M++ ++ + + ++ A +++G L+ R M E
Sbjct: 629 GFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGP 688
Query: 339 NPVLGTALIDLYAKCG 354
+ +++ L A G
Sbjct: 689 DVAASNSMLSLCADLG 704
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 14/309 (4%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K + ++ +P+T +N ++ D ++ Y + + G FP++ T VL L
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI---L 420
Query: 117 CHFHLGHTLHSLVV---KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWT 173
C + + +++ + D ++ Y G + A+ +F+ V S T
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST 480
Query: 174 ---ALICGYSESGLCEEAVDLFRGLLEM-GLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
A+I Y+E GL EA +F G M G R D ++ A + + +
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV----CWSAMIQGYASNGL 285
M G + +L M A ++EA+R+ ML+ ++AMI Y GL
Sbjct: 541 MKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGL 600
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
+A+ L+ M+K ++P+ +++ A G ++ + +M+ SN ++ T+
Sbjct: 601 LSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTS 660
Query: 346 LIDLYAKCG 354
LI Y+K G
Sbjct: 661 LIKAYSKVG 669
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 135/298 (45%), Gaps = 12/298 (4%)
Query: 34 HQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQ 89
D + + ++ + ++ N + LF + N PN +N++IR + + + D +
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
L M ++ P TF+ ++ A + L+ ++K D+F + L+ +
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 150 KCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
L +A+ +F+ + K NV ++ LI G+ ++ EE ++LFR + + GL ++
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
++ + GD + I + M G+ ++ + L++ K G +E+A VF+ +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 266 ----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+E D+ ++ MI+G G + LF + + ++P+ ++S R G
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+F + PNT +NT+I G+ ++ + + L M +G P+ FT+ V+ +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
L +L + K DV + T ++ ++ DA +F ++ K NV ++ +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G +A L ++E + P+ ++ A + G L + M +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD----VVCWSAMIQGYASNGLPREAL 290
+ ++F ++L+N + ++EA+ +F+ M+ +D VV ++ +I+G+ E +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 291 QLFFEMQKENL 301
+LF EM + L
Sbjct: 416 ELFREMSQRGL 426
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/266 (19%), Positives = 120/266 (45%), Gaps = 8/266 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ ++ T+I + + +D + L+ M +G P T+ +++ + L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSES 182
S +++ +V + L+ + K G L +A K++D++ ++++ ++++LI G+
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
+EA +F ++ P+ ++ + + G + R MS+ GL N
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQK 298
TL+ + G + A+++F M+ D++ +S ++ G G +AL +F +QK
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 299 ENLRPDCFAMVGVLSACARLGALQLG 324
+ PD + ++ + G ++ G
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDG 519
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 118/284 (41%), Gaps = 14/284 (4%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
D + L+ M Q P F +L A A++ F L +L + D++
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 144 LLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
L+ + + L A V + E ++ + ++L+ GY EAV L + M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 200 LRPDSAN---LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSME 256
+P++ L+H L + + + IDR M G ++F T+VN K G ++
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASE--AVALIDR-MVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 257 EA----RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVL 312
A +++ G +E DVV ++ +I + +AL LF EM + +RP+ ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 313 SACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G +R M + N V +ALID + K G +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 112/248 (45%), Gaps = 10/248 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ +P+ F ++++I G +D + ++ M + FP T+ ++K +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF-----DDIPEKNVASWT 173
G L + + G VG+ L+ + G A+K+F D +P ++ +++
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYS 469
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
L+ G + G E+A+ +F L + + PD ++ + G + G + +S
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV----CWSAMIQGYASNGLPREA 289
G+ NV + TT+++ + + G EEA +F M E + ++ +I+ +G +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 290 LQLFFEMQ 297
+L EM+
Sbjct: 590 AELIKEMR 597
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 4/197 (2%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H +L+ + PN +NT+I+G +G++L+ M Q+G + T+ +++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNV 169
+ + + +V G D+ + LL K G L A VF+ + E ++
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
++ +I G ++G E+ DLF L G++P+ ++ R G + R
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 230 MSESGLHRNVFVGTTLV 246
M E G N TL+
Sbjct: 561 MKEDGTLPNSGTYNTLI 577
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 11/245 (4%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
+PN ++T I + ++ +HSM + P TFT ++ + + +
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF----DDIPEKNVASWTALICGYS 180
L+ + + +V T L+ + K G ++ A +++ +D E N +T +I G+
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 181 ESGLCEEAVDLFRGLLEMGLRPD-SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ G + A+ +L G+R D +A V + G C G L I M +S L ++
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN-GKLKEATEIVEDMEKSDLVPDM 338
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
+ TT++N Y K G M+ A ++ ++ER DVV S MI G A NG EA+ ++F
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-VYFC 397
Query: 296 MQKEN 300
++K N
Sbjct: 398 IEKAN 402
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 5/247 (2%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ +Q + + +I G+ N + ++ M + P+ FT ++ A +
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
++ +++ GF DV + ++ +K G L +A V+ I + N +T LI
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-IVYFCIEKANDVMYTVLIDA 412
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ G E LF + E GL PD + + G+L + M + GL +
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFF 294
+ TTL+ A G M EAR+VFD ML D + +I+ Y G A L
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 295 EMQKENL 301
+MQ+ L
Sbjct: 533 DMQRRGL 539
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 129/307 (42%), Gaps = 22/307 (7%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMH-QQGFF--PESFTFTFVLKACARLCHFHLG 122
P+ +N++I G N + S+ GF P+ +F + +++
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKM------ 142
Query: 123 HTLHSLVVKTGFV-----GDVFVETGLLGFYSKCGHLRDARKVF----DDIPEKNVASWT 173
L + V G + +V + + + K G L+ A K F D NV ++T
Sbjct: 143 KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFT 202
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
LI GY ++G E AV L++ + + + + ++ + G++ + M E
Sbjct: 203 CLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED 262
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREA 289
+ N V TT+++ + + G + A + ML + D+ + +I G NG +EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
++ +M+K +L PD +++A + G ++ + F + V + +ID
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Query: 350 YAKCGSM 356
AK G +
Sbjct: 383 IAKNGQL 389
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 119/259 (45%), Gaps = 16/259 (6%)
Query: 55 HPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
+ +++ D+ PN+ ++ T+I G + ++ M QG + + ++
Sbjct: 256 YSRMVEDRVE-PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVA 170
+ + K+ V D+ + T ++ Y K G ++ A ++ + E+ +V
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ + +I G +++G EA+ F +E + + ++ A + GD + +
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYF--CIE---KANDVMYTVLIDALCKEGDFIEVERLFSKI 429
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEA-----RRVFDGMLERDVVCWSAMIQGYASNGL 285
SE+GL + F+ T+ + K G++ +A R V +G+L D++ ++ +I G AS GL
Sbjct: 430 SEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL-LDLLAYTTLIYGLASKGL 488
Query: 286 PREALQLFFEMQKENLRPD 304
EA Q+F EM + PD
Sbjct: 489 MVEARQVFDEMLNSGISPD 507
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ NPN +N +I + +L+ M Q+ P++ T+ ++
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ +V + ++ L+ + KC + D ++F ++ ++ N ++T
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
+I G+ ++G C+ A +F+ ++ + D +L G L + I +Y+ +S
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-LERDVVCWSAMIQGYASNGLPREALQLF 293
+ N+F+ T++ K G + EA +F + ++ DVV ++ MI G S L +EA LF
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 294 FEMQKENLRPD 304
+M+++ P+
Sbjct: 559 RKMKEDGTLPN 569
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 116/279 (41%), Gaps = 8/279 (2%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
D + L+ M + FP F +L A A++ F L +L + G D++ + +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 146 GFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
+ + L A V + E ++ + ++L+ GY S +AV L ++EMG +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
PD+ ++ + M + G ++ T+VN K G ++ A +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 262 FDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
+ M ++ +VV ++ +I A+ LF EM+ + +RP+ +++
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G +R M ++ N V ALID + K G +
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 131/321 (40%), Gaps = 22/321 (6%)
Query: 38 YLVSLVLRSSFHFGNTHHPKL-----LFDQT----HNPNTFLWNTMIRGMVDNDCFHDGI 88
Y +V SS G H ++ L DQ + P+TF + T+I G+ ++ + +
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
L M Q+G P+ T+ V+ + L L + + +V + ++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 149 SKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K H+ A +F ++ K NV ++ +LI G +A L +LE + P+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ A + G L + M + + + L+N + ++EA+++F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 265 MLERD----VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
M+ +D + ++ +I G+ + ++LF EM + L + ++ G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ-----GF 443
Query: 321 LQLGNRAKGLMDAEEFLSNPV 341
Q G+ M ++ +SN V
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRV 464
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 122/299 (40%), Gaps = 8/299 (2%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+ ++++ G + D + L M + G+ P++FTFT ++
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGY 179
L +V+ G D+ ++ K G + A + + + + NV + +I
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ E AVDLF + G+RP+ ++ G + M E ++ NV
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
L++ + K G + EA ++ + M++R D + ++ +I G+ + EA Q+F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
M ++ P+ +++ + ++ G M + N V T +I + + G
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 111/244 (45%), Gaps = 8/244 (3%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P+ +NTMI+G ++ M +G + T+ +++AC F
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYS 180
L+ + + G + ++G K G L + VF+++ K NVA +T LI GY+
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+SG E+A+ L +++ G +PD V+ + G + GL N
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLE----RDVVCWSAMIQGYASNGLPREALQLFFEM 296
++L++ K G ++EA R+F+ M E RD C++A+I + + EA+ LF M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 297 QKEN 300
++E
Sbjct: 494 EEEE 497
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
H + + TMI+ + F + LY M ++G F+ V+ + + G+
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA----RKVFDDIPEKNVASWTALICGY 179
T+ +++ G +V + T L+ Y+K G + DA ++ D+ + +V +++ ++ G
Sbjct: 348 TVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL 407
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
++G EEA+D F GL +S ++ + G + + MSE G R+
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLERD-----VVCWSAMIQGYASNGLPREALQLFF 294
+ L++ + K ++EA +F M E + V ++ ++ G EAL+L+
Sbjct: 468 YCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD 527
Query: 295 EMQKENLRPD--CF 306
M + + P CF
Sbjct: 528 MMIDKGITPTAACF 541
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 110/274 (40%), Gaps = 14/274 (5%)
Query: 90 LYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYS 149
++ M + G P +T+ F++ + ++ D+ ++ Y
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 150 KCGHLRDARKVFDDIPEK-----NVASWTALICGYSES--GLCEEAVDLFRGLLEMGLRP 202
K G + A + D+ + + T + Y++S G C V L++ + E G++
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC---VALYQEMDEKGIQV 325
Query: 203 DSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
V+G + G L G + M G NV + T L++ YAK GS+E+A R+
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 263 DGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARL 318
M++ DVV +S ++ G NG EAL F + + L + ++ +
Sbjct: 386 HRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKA 445
Query: 319 GALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
G + R M + + ALID + K
Sbjct: 446 GRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 131/291 (45%), Gaps = 8/291 (2%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +NT+I + +L ++M +GF P +T+ V+ + + +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS----WTALICGYSE 181
+ ++++G D LL K G + + KVF D+ ++V +++++ ++
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
SG ++A+ F + E GL PD+ ++ R G + + M + G +V
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
T+++ K + EA ++F+ M ER D + +I G+ G + A++LF +M+
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 298 KENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
++ +R D +L ++G + M ++E L P+ + L++
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 131/299 (43%), Gaps = 8/299 (2%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
+P + +NT+I G+ + + +++ M + G P+S T+ +L +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS----WTALICGYS 180
+ S + V D+ + ++ +++ G+L A F+ + E + +T LI GY
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
G+ A++L +L+ G D +L + LG + M+E L + +
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEM 296
T L++ + K G+++ A +F M E+ DVV ++ ++ G+ G A +++ +M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
+ + P + +++A G L R M ++ ++ ++I Y + G+
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 47/280 (16%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+NT++ G+ + +L++ M ++ FP+S+T T ++ +L + L +
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 131 KTGFVGDVFVETGLLGFYSKCG-----------------------------------HLR 155
+ DV LL + K G HL
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 156 DARKVFDDIPEKNVASWTALIC-----GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHV 210
+A +V+D++ KN+ T +IC GY SG + ++ G PD + +
Sbjct: 568 EAFRVWDEMISKNIKP-TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 211 LGACARLGDLGSGRWIDRYMSES--GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
+ R ++ + + M E GL +VF ++++ + + M+EA V M+ER
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 269 ----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
D ++ MI G+ S EA ++ EM + PD
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 107/266 (40%), Gaps = 8/266 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N +++ +IR V + + + + +GF ++ + R+ L ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSES 182
+ ++G +V+ ++ K G + + EK ++ ++ LI YS
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
GL EEA +L + G P V+ + G + + M SGL +
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLFFEMQK 298
+L+ K G + E +VF M RDV VC+S+M+ + +G +AL F +++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 299 ENLRPDCFAMVGVLSACARLGALQLG 324
L PD ++ R G + +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVA 429
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 136/308 (44%), Gaps = 15/308 (4%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQ----THNPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
Y+ ++++ GN + +FD+ + P +NT+I G +G +L H
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M + P+ FT++ ++ A + H L + K G + + + T L+ +S+ G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 154 LRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVH 209
+ ++ + + K ++ + L+ G+ ++G A ++ G++ GLRPD
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 210 VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGML--- 266
++ R GD+ + I + M ++G+ + + LV K G + +A R ML
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 267 -ERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGN 325
+ D V ++ M+ + G + +L EMQ + P +L+ +LG ++
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK--- 537
Query: 326 RAKGLMDA 333
A L+DA
Sbjct: 538 NADMLLDA 545
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 131/298 (43%), Gaps = 8/298 (2%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N +++N ++ D +++ + ++ P +F ++ ++ + G L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSES 182
+ K+ DVF + L+ K + A +FD++ ++ N +T LI G+S +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
G + + ++ +L GL+PD ++ + GDL + R I M GL +
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 243 TTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
TTL++ + + G +E A + M +E D V +SA++ G G +A + EM +
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++PD ++ A + G Q G + M ++ + + V L++ K G M
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 129 VVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN----VASWTALICGYSESGL 184
++ GF +V+V L+ + K G++ DA+KVFD+I +++ V S+ LI GY + G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 185 CEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTT 244
+E L + + RPD ++ A + + + M + GL N + TT
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 245 LVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKEN 300
L++ +++ G ++ + + ML + D+V ++ ++ G+ NG A + M +
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 301 LRPDCFAMVGVLSACARLGALQLGNRAKGLMD 332
LRPD ++ R G ++ + MD
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 94/223 (42%), Gaps = 8/223 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN ++ T+I G N + Y M +G P+ + ++ + +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV----ASWTALICGYSE 181
+++ G D T L+ + + G + A ++ ++ + + ++AL+CG +
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G +A R +L G++PD ++ A + GD +G + + M G +V
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLE----RDVVCWSAMIQGY 280
L+N K G M+ A + D ML D + ++ +++G+
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH 565
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ NPN +N++I + +L+ M Q+ P T+ ++
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ +L+V + DV L+ + K + D ++F D+ + N ++T
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G+ ++ C+ A +F+ ++ G+ P+ +L + G L + Y+ +S
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+ +++ + K G +E+ +F + ++ DV+ ++ MI G+ GL EA
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 291 QLFFEMQKENLRPD 304
LF +M+++ PD
Sbjct: 541 TLFIKMKEDGPLPD 554
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 114/249 (45%), Gaps = 8/249 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ +++T+I + D + L+ M +G P+ FT++ ++ + L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSES 182
S +++ +V L+ ++K G L +A K+FD++ ++ N+ ++ +LI G+
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
+EA +F ++ PD ++ + + G + R MS GL N
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQK 298
TTL++ + + + A+ VF M+ +++ ++ ++ G NG +A+ +F +QK
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 299 ENLRPDCFA 307
+ PD +
Sbjct: 479 SKMEPDIYT 487
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 129/296 (43%), Gaps = 12/296 (4%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLY 91
D + S V+ S + + LF + N P+ F ++++I + + + D +L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 92 HSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKC 151
M ++ P TF ++ A A+ L +++ ++ L+ +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 152 GHLRDARKVFDDIPEKN----VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANL 207
L +A+++F + K+ V ++ LI G+ ++ + ++LFR + GL ++
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 208 VHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-- 265
++ + D + + + + M G+H N+ TL++ K G +E+A VF+ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 266 --LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+E D+ ++ M +G G + LF + + ++PD A ++S + G
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 8/279 (2%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
+ + L+ M + FP F+ +L A A++ F L + + G +++ ++
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 146 GFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
+ L A + + + ++ + +L+ G+ EAV L ++EMG +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
PD+ ++ + + M G ++ ++N K G + A +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 262 FD----GMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
+ G +E DVV +S +I +AL LF EM + +RPD F ++S
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G +R M + N V +LID +AK G +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 124/273 (45%), Gaps = 12/273 (4%)
Query: 59 LFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
LF + N PN ++++I + + + + D +L M ++ P TF ++ A
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVA 170
+ L+ ++K D+F + L+ + L +A+ +F+ + K NV
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
++ LI G+ ++ +E V+LFR + + GL ++ ++ + D + + + + M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLP 286
G+H N+ TL++ K G +E+A VF+ + +E + ++ MI+G G
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ LF + + ++PD ++S R G
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 113/254 (44%), Gaps = 8/254 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ NPN +N +I V + +LY M ++ P+ FT++ ++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ L++ +V L+ + K + + ++F ++ ++ N ++T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G+ ++ C+ A +F+ ++ G+ P+ +L + G L + Y+ S
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+ ++ ++ K G +E+ +F + ++ DV+ ++ MI G+ GL EA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 291 QLFFEMQKENLRPD 304
LF +M+++ PD
Sbjct: 561 ALFRKMREDGPLPD 574
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 122/281 (43%), Gaps = 17/281 (6%)
Query: 38 YLVSLVLRSSFHFGNTHHPKL-----LFDQT----HNPNTFLWNTMIRGMVDNDCFHDGI 88
Y S+V SS G H ++ L DQ + P+T + T+I G+ ++ + +
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
L M Q+G P T+ V+ + L L + + +V + + ++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 149 SKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K H DA +F ++ K NV ++++LI +A L ++E + P+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ A + G L + M + + ++F ++L+N + ++EA+ +F+
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 265 MLERD----VVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
M+ +D VV ++ +I G+ E ++LF EM + L
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 14/282 (4%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
D I L+ M + P F F +L A A++ F L +L + + G +++ L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 146 GFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
+ + + A + + E ++ + ++L+ GY +AV L ++EMG R
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 202 PDS---ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
PD+ L+H L + + + +DR M + G N+ +VN K G ++ A
Sbjct: 188 PDTITFTTLIHGLFLHNKASE--AVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 259 RRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
+ + M +E +VV +S +I +AL LF EM+ + +RP+ ++S
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+R M + N V ALID + K G +
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H +L+ + PN +NT+I G +G++L+ M Q+G + T+T ++
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNV 169
+ + +V G ++ LL K G L A VF+ + E +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
++ +I G ++G E+ DLF L G++PD ++ R G + R
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 230 MSESG 234
M E G
Sbjct: 566 MREDG 570
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 8/279 (2%)
Query: 86 DGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLL 145
D + L+ M + FP F +L A A++ F L +L + G D++ + +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 146 GFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
+ + L A V + E ++ + ++L+ GY S +AV L ++EMG +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA--- 258
PD+ ++ + M + G ++ T+VN K G ++ A
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 259 -RRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
+++ G +E DVV ++ +I G +AL LF EM + +RPD F ++S
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G +R M + N V +ALID + K G +
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 126/281 (44%), Gaps = 17/281 (6%)
Query: 38 YLVSLVLRSSFHFGNTHHPKL-----LFDQT----HNPNTFLWNTMIRGMVDNDCFHDGI 88
Y +V SS G H ++ L DQ + P+TF + T+I G+ ++ + +
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
L M Q+G P+ T+ V+ + L +L + K DV + ++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 149 SKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K H+ DA +F ++ K +V ++++LI G +A L ++E + P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ A + G L + M + + ++F ++L+N + ++EA+ +F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 265 MLERD----VVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
M+ +D VV +S +I+G+ E ++LF EM + L
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 126/274 (45%), Gaps = 12/274 (4%)
Query: 59 LFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
LF + N P+ F ++++I + + + D +L M ++ P TF+ ++ A
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVA 170
+ L+ ++K D+F + L+ + L +A+ +F+ + K NV
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+++ LI G+ ++ EE ++LFR + + GL ++ ++ + D + + + + M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD----GMLERDVVCWSAMIQGYASNGLP 286
G+H N+ L++ K G + +A VF+ +E D+ ++ MI+G G
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 287 REALQLFFEMQKENLRPDCFAMVGVLSACARLGA 320
+ +LF + + + P+ A ++S R G+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 124/266 (46%), Gaps = 8/266 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ ++NT+I G+ D + L+ M +G P+ FT++ ++ + L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSES 182
S +++ +V + L+ + K G L +A K++D++ ++++ ++++LI G+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
+EA +F ++ P+ ++ + + G + R MS+ GL N
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLE----RDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
TTL++ + + + A+ VF M+ +++ ++ ++ G NG +A+ +F +Q+
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 299 ENLRPDCFAMVGVLSACARLGALQLG 324
+ PD + ++ + G ++ G
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDG 522
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/250 (17%), Positives = 103/250 (41%), Gaps = 35/250 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ +P+ F ++++I G +D + ++ M + FP T++ ++K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
G L + + G VG N ++T LI G
Sbjct: 414 VEEGMELFREMSQRGLVG-------------------------------NTVTYTTLIHG 442
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ ++ C+ A +F+ ++ +G+ P+ +L + G L + Y+ S + +
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFF 294
++ ++ K G +E+ +F + + +V+ ++ MI G+ G EA L
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 295 EMQKENLRPD 304
+M+++ P+
Sbjct: 563 KMKEDGPLPN 572
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H +L+ + PN ++T+I+G +G++L+ M Q+G + T+T ++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNV 169
+ + +V G ++ LL K G L A VF+ + E ++
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
++ +I G ++G E+ +LF L G+ P+ ++ R G + +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
M E G N TL+ + G E + + M
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +N +I + + + +++ M G P+ T VL A + +
Sbjct: 79 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 138
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK------NVASWTALICGY 179
L+ D ++ SK G A +F+ + EK +V ++T+++ Y
Sbjct: 139 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 198
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
S G E +F ++ GL+P+ + ++GA A G G+ + + ++G+ +V
Sbjct: 199 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 258
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
T L+N Y + +A+ VF M + +VV ++A+I Y SNG EA+++F +
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 296 MQKENLRPDCFAMVGVLSACAR 317
M+++ ++P+ ++ +L+AC+R
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSR 340
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 127/318 (39%), Gaps = 45/318 (14%)
Query: 50 FGNTHHPK-------LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
+G + P ++ + PN +N +I N + ++++ M Q G P
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
+ +L AC+R V V+T L S+ +L
Sbjct: 328 VVSVCTLLAACSRSKK------------------KVNVDTVLSAAQSRGINL-------- 361
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
N A++ + I Y + E+A+ L++ + + ++ DS ++ R+
Sbjct: 362 -----NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQ 278
+ M + + V ++++ Y+K G + EA +F+ M E DV+ +++M+
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
Y ++ +A +LF EM+ + PD A ++ A + G Q N LMD
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG--QPSN-VFVLMDLMREKE 533
Query: 339 NPVLGTALIDLYAKCGSM 356
P G ++++ C ++
Sbjct: 534 IPFTGAVFFEIFSACNTL 551
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 10/238 (4%)
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG 146
+ L M + P T+ ++ AC ++ + + G D+ +L
Sbjct: 65 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 124
Query: 147 FYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGL-- 200
Y A F+ + + ++ +I S+ G +A+DLF + E
Sbjct: 125 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
RPD ++ + G++ + R + M GL N+ L+ YA G A
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 261 VFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
V + + DVV ++ ++ Y + P +A ++F M+KE +P+ ++ A
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 302
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P+ + ++ +I G+ + + + IQ + + G P+ +T++ ++ C + G
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYS 180
++ + V L+ Y + G L A ++ +D+ K N A++T+LI G S
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
EEA LF + GL P+ + ++ +LG + + R M +H N
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQ 291
T ++ YA+ G++ EA R+ + M E+ D + + I GY G EA +
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+NT+I G + M ++G P+++T++ ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA----LICGYSESGLCE 186
+ G + DV+ + ++ K + ++ FD++ KNV T LI Y SG
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
A++L + G+ P+SA ++ + + + + + M GL NVF T L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 247 NMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ Y K G M + + M ++V + ++ MI GYA +G EA +L EM+++ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 303 PD 304
PD
Sbjct: 783 PD 784
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 132/348 (37%), Gaps = 47/348 (13%)
Query: 7 NLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHN- 65
N+L+ L N+ + D YL + + + G LF +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 66 ---PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLG 122
PN +NT+I G+ + + M ++G P T++ ++K R
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV----ASWTALICG 178
+ + + K GF +V V L+ + + G L A ++ D + K + +++ LI G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG-ACARLGDLGSGRWID----RYMSES 233
Y ++G + A L + +L +G + + V+ C+ L + R++ R MS
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 234 G--------------------------LHRNVFVGTTLVN--MYAKC--GSMEEARRVFD 263
G L++ V T N ++ C G ++EA R+
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 264 GMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFA 307
+L R D V ++ +I G EA EM K L+PD +
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 116/300 (38%), Gaps = 8/300 (2%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
+P L T+I G+ + ++L+ +GF ++ T +L
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYS 180
+ ++ G V D L+ L +A D++ ++ + +++ LICG
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
EEA+ + G+ PD ++ C + G+ M + N
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLFFEM 296
V L+ Y + G + A + + M + + ++++I+G + EA LF EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ E L P+ F ++ +LG + M ++ N + T +I YA+ G++
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P+ + ++ +I G+ + + + IQ + + G P+ +T++ ++ C + G
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYS 180
++ + V L+ Y + G L A ++ +D+ K N A++T+LI G S
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
EEA LF + GL P+ + ++ +LG + + R M +H N
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQ 291
T ++ YA+ G++ EA R+ + M E+ D + + I GY G EA +
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+NT+I G + M ++G P+++T++ ++ +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA----LICGYSESGLCE 186
+ G + DV+ + ++ K + ++ FD++ KNV T LI Y SG
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
A++L + G+ P+SA ++ + + + + + M GL NVF T L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 247 NMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ Y K G M + + M ++V + ++ MI GYA +G EA +L EM+++ +
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 303 PD 304
PD
Sbjct: 783 PD 784
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 132/348 (37%), Gaps = 47/348 (13%)
Query: 7 NLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHN- 65
N+L+ L N+ + D YL + + + G LF +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 66 ---PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLG 122
PN +NT+I G+ + + M ++G P T++ ++K R
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDA 349
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV----ASWTALICG 178
+ + + K GF +V V L+ + + G L A ++ D + K + +++ LI G
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG-ACARLGDLGSGRWID----RYMSES 233
Y ++G + A L + +L +G + + V+ C+ L + R++ R MS
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 234 G--------------------------LHRNVFVGTTLVN--MYAKC--GSMEEARRVFD 263
G L++ V T N ++ C G ++EA R+
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 264 GMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFA 307
+L R D V ++ +I G EA EM K L+PD +
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 116/300 (38%), Gaps = 8/300 (2%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
+P L T+I G+ + ++L+ +GF ++ T +L
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFR 526
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYS 180
+ ++ G V D L+ L +A D++ ++ + +++ LICG
Sbjct: 527 IQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
EEA+ + G+ PD ++ C + G+ M + N
Sbjct: 587 NMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTV 646
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLERDV----VCWSAMIQGYASNGLPREALQLFFEM 296
V L+ Y + G + A + + M + + ++++I+G + EA LF EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ E L P+ F ++ +LG + M ++ N + T +I YA+ G++
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 10/262 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +N +I + + + +++ M G P+ T VL A + +
Sbjct: 211 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 270
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK------NVASWTALICGY 179
L+ D ++ SK G A +F+ + EK +V ++T+++ Y
Sbjct: 271 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 330
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
S G E +F ++ GL+P+ + ++GA A G G+ + + ++G+ +V
Sbjct: 331 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
T L+N Y + +A+ VF M + +VV ++A+I Y SNG EA+++F +
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 296 MQKENLRPDCFAMVGVLSACAR 317
M+++ ++P+ ++ +L+AC+R
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSR 472
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 127/318 (39%), Gaps = 45/318 (14%)
Query: 50 FGNTHHPK-------LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPE 102
+G + P ++ + PN +N +I N + ++++ M Q G P
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 103 SFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD 162
+ +L AC+R V V+T L S+ +L
Sbjct: 460 VVSVCTLLAACSRSKK------------------KVNVDTVLSAAQSRGINL-------- 493
Query: 163 DIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
N A++ + I Y + E+A+ L++ + + ++ DS ++ R+
Sbjct: 494 -----NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQ 278
+ M + + V ++++ Y+K G + EA +F+ M E DV+ +++M+
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
Y ++ +A +LF EM+ + PD A ++ A + G Q N LMD
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG--QPSN-VFVLMDLMREKE 665
Query: 339 NPVLGTALIDLYAKCGSM 356
P G ++++ C ++
Sbjct: 666 IPFTGAVFFEIFSACNTL 683
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 10/238 (4%)
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG 146
+ L M + P T+ ++ AC ++ + + G D+ +L
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 147 FYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGL-- 200
Y A F+ + + ++ +I S+ G +A+DLF + E
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 316
Query: 201 RPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARR 260
RPD ++ + G++ + R + M GL N+ L+ YA G A
Sbjct: 317 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 376
Query: 261 VFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
V + + DVV ++ ++ Y + P +A ++F M+KE +P+ ++ A
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDA 434
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 136/307 (44%), Gaps = 8/307 (2%)
Query: 58 LLFDQTHN---PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
LL D T + PN+ ++ T+I + + ++ +QL M G P++ TF V+
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTA 174
+ + + + ++ GF D L+ K G + A+ +F IP+ + +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 175 LICGYSESGLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
LI G+ G ++A + ++ G+ PD ++ + G +G + M
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREA 289
G NV+ T LV+ + K G ++EA V + M L+ + V ++ +I + EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
+++F EM ++ +PD + ++S + ++ M +E ++N V LI+
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 350 YAKCGSM 356
+ + G +
Sbjct: 539 FLRRGEI 545
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 11/284 (3%)
Query: 49 HFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSM-HQQGFFPESFTFT 107
G K LF + P ++NT+I G V + D + M G P+ T+
Sbjct: 334 KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 108 FVLKACARLCHFHLG-HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP- 165
++ + L LH + K G +V+ T L+ + K G + +A V +++
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 166 ---EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ N + LI + + EAV++FR + G +PD ++ + ++
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQ 278
W+ R M G+ N TL+N + + G ++EAR++ + M+ + D + ++++I+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
G G +A LF +M ++ P + +++ R G ++
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 127/298 (42%), Gaps = 17/298 (5%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P +N ++ +V +C +++ M + P FTF V+KA + +L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD------IPEKNVASWTALICGY 179
+ K G V + + L+ SKC + +A ++ ++ +P+ ++ +I G
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD--AETFNDVILGL 297
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ EA + +L G PD +++ ++G + + + + + + +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----EI 353
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER-----DVVCWSAMIQGYASNGLPREALQLFF 294
+ TL++ + G +++A+ V M+ DV ++++I GY GL AL++
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+M+ + +P+ ++ ++ +LG + M A+ N V LI + K
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 12/233 (5%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ + +N++I G+ + D + L M +G + T+ ++ A R L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSE 181
+ +V G D L+ + G + AR +F+ + A S LI G
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
SG+ EEAV+ + ++ G PD ++ R G + G + R + G+ +
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVV----CWSAMIQGYASNGLPREAL 290
TL++ K G + +A + D +E V WS ++Q +P+E L
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI----IPQETL 720
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/291 (17%), Positives = 115/291 (39%), Gaps = 43/291 (14%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +N++I G +++ H M +G P +++T ++ +L + +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ + G + L+ + K + +A ++F ++P K +V ++ +LI G E
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+ A+ L R ++ G+ ++ ++ A R G++ R + M G +
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLE---------------------------------- 267
+L+ + G +++AR +F+ ML
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 268 -----RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
D+V ++++I G G + L +F ++Q E + PD ++S
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 82 DCFHDGIQLYHS------MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFV 135
+CF Q Y + M + GF P+ TFT ++ ++ + +V+ G
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 136 GDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDL 191
DV + T ++ K GH+ A +FD + +V +T+L+ G SG +A L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 192 FRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAK 251
RG+ + ++PD ++ A + G + M + N+F T+L+N +
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 252 CGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFA 307
G ++EAR++F M + DVV ++++I G+ +A+++F+EM ++ L +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 308 MVGVLSACARLG 319
++ ++G
Sbjct: 355 YTTLIQGFGQVG 366
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 124/278 (44%), Gaps = 8/278 (2%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
F++ + L+ M + P FT +L A++ F + L + G D++
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 144 LLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
L+ + + A + E ++ ++T+LI G+ EEA+ + ++EMG
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
++PD ++ + + G + + M G+ +V + T+LVN G +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 260 RVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
+ GM +R DV+ ++A+I + G +A +L+ EM + ++ P+ F +++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKC 353
G + + LM+ + + V T+LI+ + KC
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ + ++I G + + + + + M + G P+ +T ++ + + H + +L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ G DV + T L+ G RDA + + ++ +V ++ ALI + +
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G +A +L+ ++ M + P+ ++ G + R + M G +V
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
T+L+N + KC +++A ++F M ++ + + ++ +IQG+ G P A ++F M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 298 KENLRPD 304
+ P+
Sbjct: 380 SRGVPPN 386
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 106/244 (43%), Gaps = 8/244 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ ++ T+I + N + + L+ M G P+ +T ++ + +L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSE 181
+ K DV L+ + K G DA ++++++ ++A ++T+LI G+
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G +EA +F + G PD ++ + + I MS+ GL N
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
TTL+ + + G A+ VF M+ R ++ ++ ++ NG ++AL +F +MQ
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 298 KENL 301
K +
Sbjct: 415 KREM 418
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLG 146
+++ S +G+ + ++ + C +H + + + D+ ++
Sbjct: 165 AVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIE 224
Query: 147 FYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSAN 206
YS CG + DA VF+ +PE+N+ +W +I ++++G E+A+D F + G +PD
Sbjct: 225 MYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEM 284
Query: 207 LVHVLGACARLGDLGSGRW-IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM 265
+ AC LGD+ G + E G+ + +LV M A+ G ++EA R + M
Sbjct: 285 FKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM 344
Query: 266 LERDVVCWSAMI 277
E +V W ++
Sbjct: 345 -EPNVDLWETLM 355
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%)
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
G ++AV++ + G D L + C L + + +++ S ++
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+++ MY+ CGS+E+A VF+ M ER++ W +I+ +A NG +A+ F ++E +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 303 PDCFAMVGVLSACARLGALQLG 324
PD + AC LG + G
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEG 301
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 9/261 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
NT ++NT++ ++ + L+ M +G P + T+ ++ A AR + TL
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRD-ARKVFDDIPEKNVA----SWTALICGYSE 181
+ G +V T L+ Y + + D A F + + + S+TALI YS
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSV 497
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
SG E+A F + + G++P VL A R GD G I + M +
Sbjct: 498 SGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 242 GTTLVNMYAKCGSMEEARRV---FDGM-LERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
TL++ +AK G EAR V F M L+ V+ ++ ++ YA G + QL EM
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 298 KENLRPDCFAMVGVLSACARL 318
NL+PD ++ A R+
Sbjct: 618 ALNLKPDSITYSTMIYAFVRV 638
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 131/310 (42%), Gaps = 18/310 (5%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFT---FTFVLKACAR 115
L D+ + L+N I G+ + + D ++Y +M + +P++ T L+ R
Sbjct: 264 LPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR 323
Query: 116 LCH--FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVAS-- 171
+ + + VK + DVF GL+ + G +A + ++ +K + S
Sbjct: 324 SAKEVWEIFEKMSEKGVK--WSQDVF--GGLVKSFCDEGLKEEALVIQTEMEKKGIRSNT 379
Query: 172 --WTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+ L+ Y++S EE LF + + GL+P +A ++ A AR + R
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 230 MSESGLHRNVFVGTTLVNMYAKCGSMEE-ARRVFDGM----LERDVVCWSAMIQGYASNG 284
M + GL NV T L++ Y + M + A F M L+ ++A+I Y+ +G
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
+A F EM KE ++P VL A R G LM E+ +
Sbjct: 500 WHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYN 559
Query: 345 ALIDLYAKCG 354
L+D +AK G
Sbjct: 560 TLLDGFAKQG 569
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 119/262 (45%), Gaps = 9/262 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ ++NT+I G+ D L++ M +G P+ FT+ ++ + L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-----NVASWTALICGYSE 181
S +++ D+ L+ + K G L +A K++D++ + +V ++ LI G+ +
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
EE +++FR + + GL ++ ++ + D + + + + M G+H ++
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
L++ G++E A VF+ M +R D+V ++ MI+ G + LF +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 298 KENLRPDCFAMVGVLSACARLG 319
+ ++P+ ++S R G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKG 510
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ F +N +I + + + D +L M ++ P+ F ++ A + L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 126 HSLVVKTGFV-GDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYS 180
+ +VK+ DV L+ + K + + +VF ++ ++ N ++T LI G+
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
++ C+ A +F+ ++ G+ PD +L G++ + + YM + + ++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEM 296
TT++ K G +E+ +F + ++ +VV ++ M+ G+ GL EA LF EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 297 QKENLRPD 304
+++ P+
Sbjct: 523 KEDGPLPN 530
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 26/316 (8%)
Query: 65 NPNTFL-WNTMIRGMVDNDC-------------FHDGIQLYHSMHQQGFFPESFTFTFVL 110
NP T L W G +DC D I L+ M + FP F+ +L
Sbjct: 23 NPRTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLL 82
Query: 111 KACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE---- 166
A A++ F L +L + G +++ + + ++ + L A + + +
Sbjct: 83 SAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYG 142
Query: 167 KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWI 226
++ + +L+ G+ EAV L ++EMG +PD+ ++ + +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 227 DRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD----GMLERDVVCWSAMIQGYAS 282
M G ++ ++N K G + A + + G +E DVV ++ +I G
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 283 NGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNP-- 340
+A LF +M+ + ++PD F ++S G + + ++ L D E NP
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG--RWSDASRLLSDMLEKNINPDL 320
Query: 341 VLGTALIDLYAKCGSM 356
V ALID + K G +
Sbjct: 321 VFFNALIDAFVKEGKL 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 8/188 (4%)
Query: 67 NTFLWNTMIRGMVD-NDCFHDGIQL-YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
NT + T+I G DC D Q+ + M G P+ T+ +L +
Sbjct: 390 NTVTYTTLIHGFFQARDC--DNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALV 447
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYS 180
+ + K D+ T ++ K G + D +F + K NV ++T ++ G+
Sbjct: 448 VFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
GL EEA LF + E G P+S ++ A R GD + + + M G +
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAS 567
Query: 241 VGTTLVNM 248
+ NM
Sbjct: 568 TFGLVTNM 575
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P ++NT+I + + +D + L+ M +G P T+ +++ + L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSE 181
S +++ +V + L+ + K G L +A K++D++ ++++ ++++LI G+
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+EA +F ++ P+ ++ + + G + R MS+ GL N
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 242 GTTLVNMYAKCGSMEEARRVF-----DGMLERDVVCWSAMIQGYASNGLPREALQLFFEM 296
TTL++ + + + A+ VF DG+L D++ +S ++ G +NG AL +F +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLP-DIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 297 QKENLRPDCFAMVGVLSACARLGALQLG 324
Q+ + PD + ++ + G ++ G
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKA-CARLC 117
+ ++ NPN ++ +I V + +LY M ++ P+ FT++ ++ C
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWT 173
H ++ K F V T + GF K + + ++F ++ ++ N ++T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGF-CKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
LI G+ ++ C+ A +F+ ++ G+ PD +L G + + + Y+ S
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREA 289
+ +++ ++ K G +E+ +F + ++ +VV ++ M+ G+ GL EA
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 290 LQLFFEMQKENLRPD 304
LF EM++E PD
Sbjct: 556 DALFREMKEEGPLPD 570
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ + + P++F +NT+I G+ ++ + + L M +G P+ T+ V+ +
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
L +L + + V + ++ ++ DA +F ++ K NV ++ +
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G +A L ++E + P+ ++ A + G L + M +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD----VVCWSAMIQGYASNGLPREAL 290
+ ++F ++L+N + ++EA+ +F+ M+ +D VV ++ +I+G+ E +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 291 QLFFEMQKENL 301
+LF EM + L
Sbjct: 417 ELFREMSQRGL 427
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 12/254 (4%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+ N+++ G + D + L M + G+ P+SFTF ++ R
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA----RKVFDDIPEKNVASWTALICGY 179
L +V G D+ ++ K G + A +K+ E V + +I
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+A++LF + G+RP+ ++ G + M E ++ NV
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
+ L++ + K G + EA +++D M++R D+ +S++I G+ + EA +F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 296 MQKENLRPDCFAMV 309
M + DCF V
Sbjct: 387 M----ISKDCFPNV 396
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 39/216 (18%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H +L+ + PN +NT+I+G +G++L+ M Q+G + T+T ++
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVF--------------VETGLLGF------------ 147
+ + +V G + D+ VET L+ F
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 148 YS---------KCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRG 194
Y+ K G + D +F + K NV ++T ++ G+ GL EEA LFR
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 195 LLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ E G PDS ++ A R GD + + R M
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 124/302 (41%), Gaps = 43/302 (14%)
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
+L +G PE++T+ ++ A + F + ++ K G V + T L+
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 149 SKCGHLRDARKVFDDIPEKNVAS----WTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K G + DA K+FD++ E+ + S +T+LI G + A LF L E GL P S
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ ++G++G+ + M G++ V TL++ Y + G ++EA ++D
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 265 MLER---------------------------------------DVVCWSAMIQGYASNGL 285
M ++ V ++ +I Y G
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGN 484
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
EA +LF EM + ++P+ ++ A + G ++ + + M+A + T+
Sbjct: 485 VEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Query: 346 LI 347
LI
Sbjct: 545 LI 546
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 128/323 (39%), Gaps = 49/323 (15%)
Query: 38 YLVSLVLRSSFHFGNTHHPKLLFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHS 93
Y +++V+ G K L + P + +NT+I V F +
Sbjct: 225 YSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKV 284
Query: 94 MHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGH 153
M + G T+T +++ + L + + G DV V T L+ + + G+
Sbjct: 285 MKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGN 344
Query: 154 LRDARKVFDDIPEKNVA--SWT-------------------------------------A 174
++ A +FD++ EK ++ S+T
Sbjct: 345 MKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 404
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGR-WIDRYMSES 233
LI GY G+ +EA ++ + + G + D + RL + W+ R M E
Sbjct: 405 LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM-EG 463
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREA 289
G+ + T L+++Y K G++EEA+R+F M ++ + + ++ MI Y G +EA
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 290 LQLFFEMQKENLRPDCFAMVGVL 312
+L M+ + PD + ++
Sbjct: 524 RKLRANMEANGMDPDSYTYTSLI 546
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 12/266 (4%)
Query: 51 GNTHHPKLLFDQTH----NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
GN LLFD+ +P+++ + +I G+ L + M +G F
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
++ R ++ ++ + GF DVF + +++ +A++ + E
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 167 KNV----ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
V S+T LI Y + G EEA LF + G++P++ ++ A + G +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQ 278
R + M +G+ + + T+L++ +++EA R+F M L+++ V ++ MI
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 279 GYASNGLPREALQLFFEMQKENLRPD 304
G + G EA L+ EM+++ D
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTID 608
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 158 RKVFDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARL 217
R++ D + V S T ++ G G E++ L + G++P++ ++ A +
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 218 GDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCW 273
D + + M + G+ N T L+ + K G M +A ++FD M ER DV +
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 274 SAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDA 333
+++I G + A LF E+ ++ L P + ++ ++G + M +
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 334 EEFLSNPVLGTALIDLYAKCG 354
+ V+ LID Y + G
Sbjct: 393 KGVNITQVVFNTLIDGYCRKG 413
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 8/273 (2%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
L+ D PN + T+I G L+ M Q+G P+ ++ ++ +
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI----PEKNVASWT 173
+GH L S + G DV V + + Y K G L A V+ + NV ++T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
LI G + G EA ++ +L+ G+ P ++ + G+L SG + M +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREA 289
G +V + LV+ +K G M A R ML + +VV ++++I G+ EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQ 322
L++F M ++PD V+ G L+
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE 548
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 8/265 (3%)
Query: 65 NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHT 124
P+ + T++R + + + L+ M + G P++ + ++ A + +G
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 125 LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYS 180
L L+ + D+ V ++ KC + DA K F+++ E ++ ++ +ICGY
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 181 ESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF 240
+EA +F L P++ L ++ + D+ + M+E G N
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 241 VGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEM 296
L++ ++K +E + ++F+ M E+ +V +S +I G G EA +F +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 297 QKENLRPDCFAMVGVLSACARLGAL 321
L PD A ++ ++G L
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRL 792
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 136/339 (40%), Gaps = 43/339 (12%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K + Q +PN + +I+G+ + ++ +Y + ++G P T++ ++ +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG----HLRDARKVFDDIPEKNVASW 172
+ G L+ ++K G+ DV + L+ SK G +R + K+ NV +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSE 232
+LI G+ +EA+ +FR + G++PD A V+ G L ++ M +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 233 SGLHRNVFVGTTLVNMYA-----------------------------------KCGSMEE 257
GL + TL++ + KC +E+
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 258 ARRVF----DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
A + F +G +E D+V ++ MI GY S EA ++F ++ P+ + ++
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+ + R +M + N V L+D ++K
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 718
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
F +G + V+K V + V + LL CG P NV ++ LI G
Sbjct: 248 FRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG------------PAPNVVTFCTLING 295
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ + G + A DLF+ + + G+ PD ++ + G LG G + G+ +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGLPREALQLFF 294
V V ++ +++Y K G + A V+ ML +VV ++ +I+G +G EA ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
++ K + P ++ + G L+ G M + + V+ L+D +K G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 355 SM 356
M
Sbjct: 476 LM 477
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 8/247 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ + +++ G + D I L+ + GF P T+T +++ + H + L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI----PEKNVASWTALICGYSE 181
+ + G +V L+ + G DA + D+ E NV ++TALI + +
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G EA +L+ +++M + PD ++ G L R + M +G + N +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVVC----WSAMIQGYASNGLPREALQLFFEMQ 297
TTL++ + K +E+ ++F M ++ VV ++ +IQGY G P A ++F +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 298 KENLRPD 304
PD
Sbjct: 391 SRRAPPD 397
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 14/250 (5%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL---G 122
PN + +I V + +LY+ M Q +P+ FT+ ++ LC + L
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING---LCMYGLLDEA 312
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICG 178
+ L+ + G + + T L+ + K + D K+F ++ +K N ++T LI G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y G + A ++F + PD +L G + I YM + + N
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFF 294
+ T ++ K G +E+A +F + + +V+ ++ MI G+ GL EA LF
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 295 EMQKENLRPD 304
+M+++ P+
Sbjct: 493 KMKEDGFLPN 502
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 127/298 (42%), Gaps = 12/298 (4%)
Query: 54 HHPKLLFDQT----HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
+H LF+Q PN +N ++ G+ + + D L M ++ P TFT +
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 110 LKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK-- 167
+ A ++ L++++++ DVF L+ G L +AR++F +
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 168 --NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRW 225
N +T LI G+ +S E+ + +F + + G+ ++ ++ +G +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERD----VVCWSAMIQGYA 281
+ MS ++ L++ G +E+A +F+ M +R+ +V ++ +IQG
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSN 339
G +A LF + + ++P+ ++S R G + + M + FL N
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M + GF P+ TFT +L L ++ GF +V T L+ K
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 153 HLRDARKVFDDI----PEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV 208
HL A ++F+ + NV ++ AL+ G E G +A L R +++ + P+
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
++ A ++G L + + M + ++ +VF +L+N G ++EAR++F ++ER
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF-YLMER 321
Query: 269 -----DVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
+ V ++ +I G+ + + +++F+EM ++
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 132/330 (40%), Gaps = 49/330 (14%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+ ++R + N F+D + L+ M P FT +L A++ + + +L +
Sbjct: 51 YRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDAR------KVFDDIPEKNVASWTALICGYSESGL 184
G + T + + C + R K+ E ++ ++T+L+ GY
Sbjct: 111 ILGI--PPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 185 CEEAVDLFRGLLEMGLRPD--------------------------------SANLVH--- 209
E+A+ LF +L MG +P+ N+V
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 210 -VLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLE- 267
V G C +G G W+ R M + + NV T L++ + K G + EA+ +++ M++
Sbjct: 229 LVTGLC-EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 268 ---RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
DV + ++I G GL EA Q+F+ M++ P+ ++ + ++ G
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 325 NRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ M + ++N + T LI Y G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 120/269 (44%), Gaps = 9/269 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ + PN ++ ++ V N + +L+ M + P+ T++ ++
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ + L+V G + DV L+ + K + D K+F ++ ++ N ++
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G+ ++G ++A + F + G+ PD +LG G+L I M +
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+ ++ TT++ K G +EEA +F + L+ D+V ++ M+ G + GL E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 291 QLFFEMQKENL-RPDCFAMVGVLSACARL 318
L+ +M++E L + DC G ++ A L
Sbjct: 491 ALYTKMKQEGLMKNDCTLSDGDITLSAEL 519
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 130/305 (42%), Gaps = 16/305 (5%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN + ++ G+ ++ + D +L M ++ P T++ +L A + L
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+V+ D+ + L+ + +A ++FD + K +V S+ LI G+ +
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+ E+ + LFR + + GL ++ ++ + GD+ + M G+ +++
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
L+ G +E+A +F+ M +R D+V ++ +I+G G EA LF +
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 298 KENLRPDCFAMVGVLSACARLG------ALQLGNRAKGLMDAEEFLS--NPVLGTALIDL 349
+ L+PD ++S G AL + +GLM + LS + L LI
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 522
Query: 350 YAKCG 354
CG
Sbjct: 523 MLSCG 527
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 117/277 (42%), Gaps = 8/277 (2%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
+D I L+ M + FP F +L A +L + + +L + G D++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 144 LLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
++ + C + A + + E + + +L+ G+ +AV L ++E+G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
+PD ++ + + + + + G+ NV T LVN +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 260 RVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
R+ M+++ +V+ +SA++ + NG EA +LF EM + ++ PD +++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 316 ARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+ N+ LM ++ L++ V LI+ + K
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 131/307 (42%), Gaps = 24/307 (7%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +N ++ +V + I L M G + +TF V+ C F + L
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC--CCFQVSLAL 140
Query: 126 HSL--VVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGY 179
L ++K G+ D L+ + + + DA + D + E ++ ++ A+I
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVL-GACARLGDLGSGRWID--RYMSE---S 233
++ +A D F+ + G+RP+ ++ G C S RW D R +S+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC------NSSRWSDAARLLSDMIKK 254
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREA 289
+ NV + L++ + K G + EA+ +F+ M ++ D+V +S++I G + EA
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
Q+F M + D + +++ + ++ G + M +SN V LI
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 350 YAKCGSM 356
+ + G +
Sbjct: 375 FFQAGDV 381
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 4/210 (1%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN +N +I G ND + + ++ S+ QG P + + ++ A +L G L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK---NVASWTALICGYSES 182
+ + G V DV L+ + G++ A+K+FD + K ++ ++ L+ GY
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRK 483
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM-SESGLHRNVFV 241
G +A L + + +MGL+P V+ + G+L + + M E L NV
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS 543
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
L+ Y++ G +E+A + + MLE+ +V
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/350 (19%), Positives = 141/350 (40%), Gaps = 14/350 (4%)
Query: 2 ALELKNLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKLLFD 61
AL K L++ LK V + + + ++V+ + G + + + +
Sbjct: 188 ALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVME 247
Query: 62 QTH----NPNTFLWNTMIRGMVD---NDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACA 114
+PN +NT+I G N + + M + P TF ++
Sbjct: 248 DMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFW 307
Query: 115 RLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVA 170
+ + + ++ +V L+ G + +A + D + + N+
Sbjct: 308 KDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
++ ALI G+ ++ + +EA+D+F + G P + ++ A +LG + G + M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER---DVVCWSAMIQGYASNGLPR 287
G+ +V L+ + G++E A+++FD + + D+V + +++GY G R
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESR 487
Query: 288 EALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
+A L EM K L+P V+ + G L+ + M+ E L
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 124/289 (42%), Gaps = 13/289 (4%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
N+ + + ++ +N F G + + G+ + + ++ A + ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSE- 181
+++ +VF ++ K G + AR V +D+ NV S+ LI GY +
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 182 --SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+G +A + + ++E + P+ ++ + +L + + M + + NV
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGLPREALQLFFE 295
+L+N G + EA + D M+ + +++ ++A+I G+ N + +EAL +F
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGT 344
++ + P ++ A +LG + G K M+ E + P +GT
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV--PDVGT 438
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 142/370 (38%), Gaps = 78/370 (21%)
Query: 57 KLLFDQTHNPNTFLWNTMIRG-------------------------------MVDNDC-- 83
K + + +PN F +N +IRG ++D C
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 84 --FHDGIQLYHSMHQQGFFP-----------------------------------ESFTF 106
DG +L SM +G P + T+
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
++K + +FH +H+ +++ G V T L+ K G++ A + D +
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 167 K----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ N ++T L+ G+S+ G EA + R + + G P ++ G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQ 278
+ M E GL +V +T+++ + + ++EA RV M+E+ D + +S++IQ
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS 338
G+ +EA L+ EM + L PD F +++A G L+ + M + L
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 339 NPVLGTALID 348
+ V + LI+
Sbjct: 554 DVVTYSVLIN 563
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 132/320 (41%), Gaps = 33/320 (10%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN + T++ G ++ ++ M+ GF P T+ ++ H G
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING-----HCVTGKME 432
Query: 126 HSLVV-----KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALI 176
++ V + G DV + +L + + + +A +V ++ EK + ++++LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 177 CGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLH 236
G+ E +EA DL+ +L +GL PD ++ A GDL + M E G+
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 237 RNVFVGTTLVNMYAKCGSMEEARRV-----FDGMLERDVVCWS--------------AMI 277
+V + L+N K EA+R+ ++ + DV + ++I
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 278 QGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL 337
+G+ G+ EA Q+F M +N +PD A ++ R G ++ M FL
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 338 SNPVLGTALIDLYAKCGSMG 357
+ V AL+ K G +
Sbjct: 673 LHTVTVIALVKALHKEGKVN 692
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 12/269 (4%)
Query: 51 GNTHHPKLLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTF 106
GN LFD+ PN +NT+I G DG +L SM +G P ++
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 107 TFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
V+ R + + + + G+ D L+ Y K G+ A + ++
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 167 ----KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+V ++T+LI ++G A++ + GL P+ ++ ++ G +
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQ 278
+ R M+++G +V L+N + G ME+A V + M E+ DVV +S ++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 279 GYASNGLPREALQLFFEMQKENLRPDCFA 307
G+ + EAL++ EM ++ ++PD
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+T ++++I+G + + LY M + G P+ FT+T ++ A L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVF------DDIPE-----------KN 168
H+ +V+ G + DV + L+ +K R+A+++ + +P N
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 169 V--ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD-SANLVHVLGACARLGDLGSGRW 225
+ S +LI G+ G+ EA +F +L +PD +A + + G C R GD+
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHC-RAGDIRKAYT 661
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF 262
+ + M +SG + LV K G + E V
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 111/279 (39%), Gaps = 9/279 (3%)
Query: 87 GIQLYHSMHQQGFFPESFTFTFVLKACARLC-HFHLGHTLHSLVVKTGFVGDVFVETGLL 145
+ + H GF P ++ VL A R + + ++++ +VF L+
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 146 GFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLR 201
+ G++ A +FD + K NV ++ LI GY + ++ L R + GL
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 202 PDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRV 261
P+ + V+ R G + ++ M+ G + TL+ Y K G+ +A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 262 FDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACAR 317
ML V+ ++++I G A++ +M+ L P+ ++ ++
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 318 LGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
G + R M+ F + V ALI+ + G M
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 14/309 (4%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
L +Q P+ +N +I G+ N F + M +G P+S+T+ ++ +
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
L + V GFV D F L+ G A +F++ K NV +
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G S G+ EA L + E GL P+ ++ ++G + + + M G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREAL 290
++F L++ Y+ ME A + D ML+ DV +++++ G + +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 291 QLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLS-NP--VLGTALI 347
+ + M ++ P+ F +L + R L + A GL++ + S NP V LI
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKL---DEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 348 DLYAKCGSM 356
D + K G +
Sbjct: 574 DGFCKNGDL 582
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 12/267 (4%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN F +N I+G+ +++ + +QG P+ T+ ++ + F
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD------IPEKNVASWTALICGY 179
+V G D + L+ Y K G ++ A ++ D +P++ ++ +LI G
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ--FTYRSLIDGL 366
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
G A+ LF L G++P+ ++ + G + + MSE GL V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
LVN K G + +A + M+ + D+ ++ +I GY++ AL++
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQ 322
M + PD + +L+ + +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P F +N ++ +VD+ F ++Y M +G P+ ++FT +K+ + H L
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESGLC 185
+ + G C E NV ++ ++ G+ E
Sbjct: 169 LNNMSSQG-----------------C--------------EMNVVAYCTVVGGFYEENFK 197
Query: 186 EEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTL 245
E +LF +L G+ + +L + GD+ + + + G+ N+F
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 246 VNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
+ + G ++ A R+ ++E+ DV+ ++ +I G N +EA +M E L
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 302 RPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALID 348
PD + +++ + G +QL R G F+ + +LID
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLID 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACAR-- 115
++ D +P+ + +N+++ G+ F D ++ Y +M ++G P FTF +L++ R
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 116 -------LCHFHLGHTLHSLVVKTGFVGDVFVETG-LLGFYSKCGHLRDARKVFDDIPEK 167
L +++ V G + D F + G L G Y+ + +A KV P
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
N+ +I ++E A LF+ +++ L PD ++ + G++ G
Sbjct: 606 NI-----IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDVV 271
M E+G ++ ++N + EA + M+++ +V
Sbjct: 661 LEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 125/265 (47%), Gaps = 8/265 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN ++NT+I G+ N ++ +++++ M ++G ++ T+ ++ + + L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+VK +V T L+ + K G+L +AR ++ ++ + NV ++ +LI G+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G +A +F ++ G PD ++ + + G + M+ GL + F
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLE----RDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
TL++ Y + G + A++VF+ M++ D+V ++ ++ +NG +AL + ++Q
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 298 KENLRPDCFAMVGVLSACARLGALQ 322
K + D ++ R L+
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLK 446
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 131/290 (45%), Gaps = 9/290 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
+NT+I G+ ++ + D +L M ++ P FT ++ + + L+ ++
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCE 186
+ V +VF L+ + G L DA+ +FD + K +V ++ LI G+ +S E
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
+ + LF + GL D+ ++ + G L + + M + G+ ++ L+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 247 NMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ G +E+A + + + ++ D++ ++ +IQG +EA LF + ++ ++
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFL-SNPVLGTALIDLYA 351
PD A + ++S R G + ++ M + F+ S + L D Y
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYT 511
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 8/243 (3%)
Query: 93 SMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG 152
M + GF P T +L + F +L + GFV +V + ++ K
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 153 HLRDARKVFDDIPEKNV----ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLV 208
L +A +VF + +K + ++ LI G S SG +A L R +++ + P+
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 209 HVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER 268
++ + G+L R + + M + NVF +L+N + G + +A+ +FD M+ +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 269 ----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLG 324
DVV ++ +I G+ + + ++LF EM + L D F ++ + G L +
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 325 NRA 327
+
Sbjct: 379 QKV 381
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 120/283 (42%), Gaps = 18/283 (6%)
Query: 88 IQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
I LYH M G + ++FT ++ R L L ++K GF + LL
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 148 YSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
+ + ++A + D + NV + +I G ++ A+++F + + G+R D
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 204 SANLVHVLGACARLGDLGSGRWID-----RYMSESGLHRNVFVGTTLVNMYAKCGSMEEA 258
+ ++ + SGRW D R M + + NV T L++ + K G++ EA
Sbjct: 219 AVTYNTLISGLS-----NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 259 RRVFDGMLERDVV----CWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSA 314
R ++ M+ R VV ++++I G+ +G +A +F M + PD +++
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 315 CARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMG 357
+ ++ G + M + + + LI Y + G +
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 17/265 (6%)
Query: 53 THHPKLLFDQTH---NPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFV 109
T +LL D +PN + +I V + LY M ++ P FT+ +
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 110 LKA-CARLCHFHLGHT--LHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE 166
+ C C LG + L+V G DV L+ + K + D K+F ++
Sbjct: 296 INGFCIHGC---LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 167 KNVA----SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGS 222
+ + ++ LI GY ++G A +F +++ G+ PD +L G +
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 223 GRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQ 278
+ + +S + ++ ++ + ++EA +F + + D + + MI
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 279 GYASNGLPREALQLFFEMQKENLRP 303
G GL REA +L M+++ P
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMP 497
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 7 NLLMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKL-LFDQT-- 63
N+L+ +Q+ +A H+ + + L + F G+ + L +FDQ
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 64 --HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHL 121
+ PN ++NT+I G+ + + + L + M + G P+ T+ ++ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 122 GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALIC 177
+ S + K DVF L+ K G + +A + ++++ + ++ +++ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 178 GYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHR 237
G +EA ++F ++ G PD ++ + + G + MS+ G+ R
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 238 NVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLF 293
N T L+ Y + G + A +F M + +++ ++ ++ G NG +AL +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 294 FEMQKENLRPD 304
+MQK + D
Sbjct: 420 ADMQKNGMDAD 430
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 110/247 (44%), Gaps = 8/247 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +N++I G+ + + D ++ M ++ +P+ FTF ++ AC +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ +++ D+ + L+ L +A ++F + K +V +++ LI GY +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
S E + LF + + G+ ++ ++ R G L I R M G+H N+
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 242 GTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
L++ G +E+A + M ++ D+V ++ +I+G G +A ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 298 KENLRPD 304
+ L PD
Sbjct: 459 CQGLMPD 465
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 20/283 (7%)
Query: 88 IQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
I L+ M G T +L R L + ++K G + LL
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 148 YSKCGHLRDARKVFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
+ + + DA +FD + + NV + +I G +S + A+DL + + G+ PD
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 204 SANLVHVL-GACARLGDLGSGRWIDRY-----MSESGLHRNVFVGTTLVNMYAKCGSMEE 257
++ G C+ SGRW D M++ ++ +VF L++ K G + E
Sbjct: 221 VVTYNSLISGLCS------SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 258 ARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLS 313
A ++ M+ R D+V +S +I G EA ++F M + PD +++
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 314 ACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
+ ++ G + M + N V T LI Y + G +
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 119/267 (44%), Gaps = 8/267 (2%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P ++NT+I G+ D + L+ M +G P T++ ++ + L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
S +++ DVF + L+ + K G L +A K++D++ ++ ++ ++++LI G+
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+EA +F ++ PD ++ + + G + R MS+ GL N
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
L+ + G + A+ +F M+ +++ ++ ++ G NG +A+ +F +Q
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 298 KENLRPDCFAMVGVLSACARLGALQLG 324
+ + P + ++ + G ++ G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ NP+ F ++ +I V + +LY M ++ P T++ ++
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ +V DV L+ + K + + +VF ++ ++ N ++
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G ++G C+ A ++F+ ++ G+ P+ +L + G L + Y+ S
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+ ++ ++ K G +E+ +F + ++ DVV ++ MI G+ G EA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 291 QLFFEMQKENLRPD 304
LF EM+++ P+
Sbjct: 557 ALFKEMKEDGTLPN 570
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 125/281 (44%), Gaps = 17/281 (6%)
Query: 38 YLVSLVLRSSFHFGNTHHPKL-----LFDQT----HNPNTFLWNTMIRGMVDNDCFHDGI 88
Y ++V SS G H ++ L DQ + PNT +NT+I G+ ++ + +
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
L M +G P+ T+ V+ + L L + + + V + ++
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 149 SKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K H+ DA +F ++ K NV ++++LI G +A L ++E + PD
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ A + G L + M + + ++ ++L+N + ++EA+++F+
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386
Query: 265 MLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENL 301
M+ + DVV ++ +I+G+ E +++F EM + L
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 4/204 (1%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ +NT+I+G +G++++ M Q+G + T+ +++ + + +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSE 181
+V G ++ LL K G L A VF+ + E + ++ +I G +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+G E+ DLF L G++PD ++ R G + + M E G N
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 242 GTTLVNMYAKCGSMEEARRVFDGM 265
TL+ + G E + + M
Sbjct: 574 YNTLIRARLRDGDREASAELIKEM 597
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 21/303 (6%)
Query: 58 LLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLC 117
L+ D PN + T+I G L+ M Q+G P+ ++ ++ +
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 118 HFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDI----PEKNVASWT 173
+GH L S + G DV V + + Y K G L A V+ + NV ++T
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 174 ALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSES 233
LI G + G EA ++ +L+ G+ P ++ + G+L SG + M +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 234 GLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREA 289
G +V + LV+ +K G M A R ML + +VV ++++I G+ EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 290 LQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDL 349
L++F M ++PD V + R+ ++ DA P +G L DL
Sbjct: 516 LKVFRLMGIYGIKPD----VATFTTVMRVSIME---------DAFCKHMKPTIGLQLFDL 562
Query: 350 YAK 352
+
Sbjct: 563 MQR 565
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 120/277 (43%), Gaps = 14/277 (5%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ Q+ N ++N++I G + F + ++++ M G P+ TFT V++
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 119 F------HLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KN 168
F +G L L+ + D+ V ++ KC + DA K F+++ E +
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 169 VASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDR 228
+ ++ +ICGY +EA +F L P++ L ++ + D+ +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 229 YMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNG 284
M+E G N L++ ++K +E + ++F+ M E+ +V +S +I G G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 285 LPREALQLFFEMQKENLRPDCFAMVGVLSACARLGAL 321
EA +F + L PD A ++ ++G L
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 763
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 136/311 (43%), Gaps = 16/311 (5%)
Query: 57 KLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARL 116
K + Q +PN + +I+G+ + ++ +Y + ++G P T++ ++ +
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 117 CHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCG----HLRDARKVFDDIPEKNVASW 172
+ G L+ ++K G+ DV + L+ SK G +R + K+ NV +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 173 TALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA-------CARLGDLGSGRW 225
+LI G+ +EA+ +FR + G++PD A V+ C + +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 226 IDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVF----DGMLERDVVCWSAMIQGYA 281
D M + + ++ V ++++ KC +E+A + F +G +E D+V ++ MI GY
Sbjct: 560 FD-LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 282 SNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPV 341
S EA ++F ++ P+ + ++ + + R +M + N V
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 342 LGTALIDLYAK 352
L+D ++K
Sbjct: 679 TYGCLMDWFSK 689
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 16/242 (6%)
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICG 178
F +G + V+K V + V + LL CG P NV ++ LI G
Sbjct: 248 FRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG------------PAPNVVTFCTLING 295
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
+ + G + A DLF+ + + G+ PD ++ + G LG G + G+ +
Sbjct: 296 FCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLD 355
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGLPREALQLFF 294
V V ++ +++Y K G + A V+ ML +VV ++ +I+G +G EA ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 295 EMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
++ K + P ++ + G L+ G M + + V+ L+D +K G
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 355 SM 356
M
Sbjct: 476 LM 477
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 130/296 (43%), Gaps = 16/296 (5%)
Query: 74 MIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTG 133
++ G+++ + +++++ ++G P T+T ++ A R HFH +L S V K G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 134 FVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAV 189
D + ++ S+ G+L A K+F+ + E +++ LI GY + G EE+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 190 DLFRGLL--EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVN 247
L +L EM L+P+ ++ A + I M G+ +V TL
Sbjct: 445 RLLDMMLRDEM-LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 248 MYAKCGSMEEAR-----RVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
YA+ GS A R+ ++ +V ++ GY G EAL+ F+ M++ +
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 303 PDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNP--VLGTALIDLYAKCGSM 356
P+ F ++ + + LM EEF P V + L++ ++ G M
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLM--EEFGVKPDVVTFSTLMNAWSSVGDM 617
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 143/367 (38%), Gaps = 56/367 (15%)
Query: 9 LMQGLKSFNQVKVAHXXXXXXXXXXHQDNYLVSLVLRSSFHFGNTHHPKL-LFDQTHN-- 65
LM GL + + AH H+ + + L ++ H L L +
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 66 --PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
P+T L+N +I ++ ++++ M + G P + TF ++K ++
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 124 TLHSLVVKT------------------------------------GFVGDVFVETGLLGF 147
L ++++ G DV L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 148 YSKCGHLRDARKVFDDIP-------EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGL 200
Y++ G A + IP + NV + ++ GY E G EEA+ F + E+G+
Sbjct: 505 YARIGSTCTAEDMI--IPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 201 RPDSANLVHVLGACARLGDL-GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
P+ ++ + D+ G G +D M E G+ +V +TL+N ++ G M+
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVD-LMEEFGVKPDVVTFSTLMNAWSSVGDMKRCE 621
Query: 260 RVFDGMLE----RDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSAC 315
++ MLE D+ +S + +GYA G P +A Q+ +M+K +RP+ ++S
Sbjct: 622 EIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGW 681
Query: 316 ARLGALQ 322
G ++
Sbjct: 682 CSAGEMK 688
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
++ +I G+ + + L++ M +GF + T+ ++ + G L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSESGLCE 186
K +V + L+ + K G LR+A ++ ++ ++ +A ++ +LI G+ + E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
EA+ + ++ G PD ++ + + G + R MS G+ N TLV
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 247 NMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ + G +E A+++F M+ R D+V + ++ G NG +AL++F +++K +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 303 PD 304
D
Sbjct: 506 LD 507
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 8/241 (3%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
H P NT++ G+ N D + L M + GF P T+ VL + L
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGY 179
L + + D + ++ K G L +A +F+++ K ++ ++ LI G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+G ++ L R +++ + P+ ++ + + G L + + M + G+ N
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
+L++ + K +EEA ++ D M+ + D++ ++ +I GY + L+LF E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 296 M 296
M
Sbjct: 429 M 429
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 108/254 (42%), Gaps = 18/254 (7%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+T ++NT++ G+ + ++L M + G P T ++
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNV----ASWTALICGY 179
L +V+TGF + +L K G A ++ + E+N+ ++ +I G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID-----RYMSESG 234
+ G + A +LF + G + D ++G G +GRW D R M +
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG-----GFCNAGRWDDGAKLLRDMIKRK 328
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREAL 290
+ NV + L++ + K G + EA ++ M++R + + ++++I G+ EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 291 QLFFEMQKENLRPD 304
Q+ M + PD
Sbjct: 389 QMVDLMISKGCDPD 402
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PNT +N++I G + + IQ+ M +G P+ TF ++ + G L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ G + + L+ + + G L A+K+F ++ + ++ S+ L+ G +
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 182 SGLCEEAVDLF 192
+G E+A+++F
Sbjct: 486 NGELEKALEIF 496
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+ ++ +I V + +LY+ M +G P++ T+ ++ + H + +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
L+V G D+ + L+ Y K + D ++F +I K N ++ L+ G+ +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
SG A +LF+ ++ G+ P +L G+L I M +S + + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 242 GTTLVNMYAKCGSMEEARRVF----DGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQ 297
+++ +++A +F D ++ DVV ++ MI G G EA LF +M+
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 298 KENLRPDCFA 307
++ PD F
Sbjct: 553 EDGCTPDDFT 562
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 116/288 (40%), Gaps = 9/288 (3%)
Query: 77 GMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVG 136
G+VD +D I L+ SM Q P F + A AR + L + G
Sbjct: 45 GIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEH 103
Query: 137 DVFVETGLLGFYSKCGHLRDARKVFDDI----PEKNVASWTALICGYSESGLCEEAVDLF 192
D++ T ++ Y + L A V E + +++ L+ G+ G EAV L
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 193 RGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKC 252
++EM RPD + ++ G + + M E G + ++N K
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 253 GSMEEARRVFDGMLERD----VVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAM 308
G+ A +F M ER+ VV +S +I +G +AL LF EM+ + ++ D
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 309 VGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSM 356
++ G G + M + + V +ALID++ K G +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 108/257 (42%), Gaps = 8/257 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ + P+ +T+I G+ + + L M + GF P+ T+ VL + +
Sbjct: 166 MVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
L L + + V + ++ K G DA +F+++ K +V ++++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G G ++ + R ++ + PD ++ + G L + + M G
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGML----ERDVVCWSAMIQGYASNGLPREAL 290
+ + +L++ + K + EA ++FD M+ E D+V +S +I Y + +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 291 QLFFEMQKENLRPDCFA 307
+LF E+ + L P+
Sbjct: 406 RLFREISSKGLIPNTIT 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 125/301 (41%), Gaps = 8/301 (2%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+T ++T++ G + + L M + P+ T + ++
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKN----VASWTALICGY 179
L +V+ GF D +L K G+ A +F + E+N V ++ +I
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 180 SESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNV 239
+ G ++A+ LF + G++ D ++G G G + R M + +V
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 240 FVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFE 295
+ L++++ K G + EA+ +++ M+ R D + ++++I G+ EA Q+F
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 296 MQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
M + PD ++++ + + G R + ++ + N + L+ + + G
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 356 M 356
+
Sbjct: 436 L 436
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/220 (17%), Positives = 86/220 (39%), Gaps = 39/220 (17%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
P+T +N++I G +C H+ Q++ M +G P+ T++ ++ + + G L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSE 181
+ G + + L+ + + G L A+++F ++ + +V ++ L+ G +
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 182 SGLCEEAVDLFR-----------------------------------GLLEMGLRPDSAN 206
+G +A+++F L + G++PD
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 207 LVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
++G + G L + R M E G + F L+
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 8/254 (3%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ ++ NPN +N +I V F + +L+ M ++ P+ FT+ ++
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 119 FHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
+ +V D+ L+ + K + D ++F ++ + + ++T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
LI G G C+ A +F+ ++ G+ PD +L G L + YM +S
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+ ++++ TT++ K G +++ +F + ++ +VV ++ MI G S L +EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 291 QLFFEMQKENLRPD 304
L +M+++ PD
Sbjct: 486 ALLKKMKEDGPLPD 499
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/266 (19%), Positives = 116/266 (43%), Gaps = 8/266 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ ++NT+I + D + L+ M +G P T++ ++ + L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSES 182
S +++ ++ L+ + K G +A K+ DD+ ++++ ++ +LI G+
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
++A +F ++ PD ++ + + G + R MS GL +
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 243 TTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQK 298
TTL+ G + A++VF M+ D++ +S ++ G +NG +AL++F MQK
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 299 ENLRPDCFAMVGVLSACARLGALQLG 324
++ D + ++ + G + G
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDG 449
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 18/269 (6%)
Query: 100 FPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARK 159
P F F +L A A++ F L +L + + G +++ L+ + + + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 160 VFDDIP----EKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS---ANLVHVLG 212
+ + E ++ + ++L+ GY +AV L ++EMG RPD+ L+H L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LER 268
+ + + +DR M + G N+ +VN K G ++ A + + M +E
Sbjct: 127 LHNKASE--AVALVDR-MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 269 DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAK 328
DVV ++ +I +AL LF EM+ + +RP+ ++S G + + ++
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG--RWSDASQ 241
Query: 329 GLMDAEEFLSNPVLGT--ALIDLYAKCGS 355
L D E NP L T ALID + K G
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 140/371 (37%), Gaps = 52/371 (14%)
Query: 38 YLVSLVLRSSFHFGNTHHPKL-----LFDQT----HNPNTFLWNTMIRGMVDNDCFHDGI 88
Y S+V SS G H ++ L DQ + P+T + T+I G+ ++ + +
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 89 QLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFY 148
L M Q+G P T+ V+ + L L + + DV + ++
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 149 SKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDS 204
K H+ DA +F ++ K NV ++++LI G +A L ++E + P+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 205 ANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDG 264
++ A + G + M + + ++F +L+N + +++A+++F+
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 265 MLERD---------------------------------------VVCWSAMIQGYASNGL 285
M+ +D V ++ +IQG +G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 286 PREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTA 345
A ++F +M + + PD +L G L+ M E + + T
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 346 LIDLYAKCGSM 356
+I+ K G +
Sbjct: 436 MIEGMCKAGKV 446
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 115/254 (45%), Gaps = 18/254 (7%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHF---- 119
H P+ + ++ + F + M QG P T+ ++ R+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 120 HLGHTLHSLVVK-TGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTA 174
L + SL VK T + VF++ +Y K G A + F+ + K N+ + A
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFID-----YYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 175 LICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESG 234
+ +++G EA +F GL ++GL PDS ++ +++G++ + M E+G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 235 LHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREAL 290
+V V +L+N K ++EA ++F M L+ VV ++ ++ G NG +EA+
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 291 QLFFEMQKENLRPD 304
+LF M ++ P+
Sbjct: 594 ELFEGMVQKGCPPN 607
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 51/322 (15%)
Query: 36 DNYLVSLVLRSSFHFGNTHHPKLLFDQTHN-----PNTFLWNTMIRGMVDNDCFHDGIQL 90
D+ LV ++ S H N + LF++ P +N +I G+++ D +
Sbjct: 749 DSILVPIIRYSCKH-NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 807
Query: 91 YHSMHQQGFFPESFTFTFVLKACARL--------------CHFHLGHTLHSLVVKTGFVG 136
+ + G P+ T+ F+L A + H +T+ +V +G V
Sbjct: 808 FLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 137 DVFVETGLLGFY----------------------SKCGHLRDARKVFDDIPE----KNVA 170
V+ L +Y SK G L +A+++F+ + + N A
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 171 SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYM 230
+ LI G+ ++G + A LF+ +++ G+RPD ++ +G + G + +
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 231 SESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM-----LERDVVCWSAMIQGYASNGL 285
ESGL+ +V ++N K +EEA +F+ M + D+ ++++I G+
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 286 PREALQLFFEMQKENLRPDCFA 307
EA +++ E+Q+ L P+ F
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFT 1069
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 7/235 (2%)
Query: 66 PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTL 125
PN N + + + Q+++ + G P+S T+ ++K +++ L
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 126 HSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSE 181
S +++ G DV V L+ K + +A K+F + E V ++ L+ G +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 182 SGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
+G +EA++LF G+++ G P++ + + ++ + M + G +VF
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 242 GTTLVNMYAKCGSMEEARRVFDGM---LERDVVCWSAMIQGYASNGLPREALQLF 293
T++ K G ++EA F M + D V ++ G L +A ++
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/254 (18%), Positives = 109/254 (42%), Gaps = 16/254 (6%)
Query: 72 NTMIRGMVDNDCFHDGIQLYHSMHQQ-----GFFPESFTFTFVLKACARLCHFHLGHTLH 126
++++ ++ C H+ + ++ ++ G P+ T+ ++ + +
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNVASWTALICGYSES 182
V TG + DV LL Y K G + + +++ ++ E N + +I G ++
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 183 GLCEEAVDLFRGLL-EMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFV 241
G ++A+DL+ L+ + P + ++ ++ G L + + M + G N +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 242 GTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQ 297
L+N + K G + A +F M++ D+ +S ++ G E L F E++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 298 KENLRPD--CFAMV 309
+ L PD C+ ++
Sbjct: 989 ESGLNPDVVCYNLI 1002
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 4/194 (2%)
Query: 168 NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWID 227
N S+ LI +S C EA++++R ++ G RP ++ + D+ S +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 228 RYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASN 283
+ M GL NV+ T + + + G + EA + M + DVV ++ +I +
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 284 GLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLG 343
A ++F +M+ +PD + +L + L + M+ + + + V
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 344 TALIDLYAKCGSMG 357
T L+D K G+ G
Sbjct: 367 TILVDALCKAGNFG 380
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 113/289 (39%), Gaps = 43/289 (14%)
Query: 59 LFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCH 118
+ + H P N ++ G+ N D + L M + GF P T+ VLK +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 119 FHLGHTL---------------HSLVVK--------------------TGFVGDVFVETG 143
L L +S+++ GF D+ + T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 144 LLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
L+ + G D K+ D+ ++ +V +++ALI + + G EA +L + +++ G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEAR 259
+ PD+ ++ + L + M G N+ L+N Y K +++
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 260 RVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPD 304
+F M R D V ++ +IQG+ G A +LF EM +RPD
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 114/242 (47%), Gaps = 8/242 (3%)
Query: 71 WNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVV 130
++ +I G+ + + L++ M +GF + +T +++ + G L ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 131 KTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVA----SWTALICGYSESGLCE 186
K DV + L+ + K G LR+A ++ ++ ++ ++ ++T+LI G+ + +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 187 EAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLV 246
+A + ++ G P+ ++ + + G + R MS G+ + TL+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 247 NMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKENLR 302
+ + G +E A+ +F M+ R D+V + ++ G NG P +AL++F +++K +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 303 PD 304
D
Sbjct: 490 LD 491
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 113/273 (41%), Gaps = 8/273 (2%)
Query: 88 IQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGF 147
+ L M +G +T + ++ C R L + ++K G+ D + L+
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 148 YSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPD 203
G + +A ++ D + E + + AL+ G +G +AV L ++E G +P+
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 204 SANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFD 263
VL + G + R M E + + + +++ K GS++ A +F+
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 264 GM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
M + D++ ++ +I+G+ G + +L +M K + PD A ++ + G
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Query: 320 ALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
L+ M + V T+LID + K
Sbjct: 332 KLREAEELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 67 NTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLH 126
+ ++ T+IRG + DG +L M ++ P+ F+ ++ + LH
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 127 SLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEK----NVASWTALICGYSES 182
+++ G D T L+ + K L A + D + K N+ ++ LI GY ++
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 183 GLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVG 242
L ++ ++LFR + G+ D+ ++ LG L + + + M + ++
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 243 TTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
L++ G E+A +F+ + +E D+ ++ +I G + +A LF +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 299 ENLRPD 304
+ ++PD
Sbjct: 521 KGVKPD 526
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 35/293 (11%)
Query: 64 HNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGH 123
+ P+T ++T+I G+ + ++L M + G P T ++ G
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVN----------GL 187
Query: 124 TLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIPEKNVASWTALICGYSESG 183
L+ V + D VETG + N ++ ++ +SG
Sbjct: 188 CLNGKVSDAVLLIDRMVETGF---------------------QPNEVTYGPVLKVMCKSG 226
Query: 184 LCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGT 243
A++L R + E ++ D+ ++ + G L + + M G ++ + T
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Query: 244 TLVNMYAKCGSMEEARRVFDGMLER----DVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
TL+ + G ++ ++ M++R DVV +SA+I + G REA +L EM +
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAK 352
+ PD ++ + L N LM ++ N LI+ Y K
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 4/185 (2%)
Query: 54 HHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
H L+ + PN +N +I G + DG++L+ M +G ++ T+ +++
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDDIP----EKNV 169
L + L +V D+ LL G A ++F+ I E ++
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 170 ASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRY 229
+ +I G + ++A DLF L G++PD ++G + G L + R
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 230 MSESG 234
M E G
Sbjct: 553 MEEDG 557
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 122/298 (40%), Gaps = 37/298 (12%)
Query: 58 LLFDQTHN----PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKAC 113
LLF++ + + + M+ + ++ M + G P T+T ++ A
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 114 ARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFD------DIPE- 166
+ + L ++ G + ++ + L+ + K G + A ++F+ D+P+
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 167 -------------KNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGA 213
NV ++ AL+ G+ +S EEA L + G P+ ++
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 214 CARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLER----D 269
++G L + + MSE G ++ ++L++ Y K + A +V MLE +
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 270 VVCWSAMIQGYASNGLPREALQLFFEMQKENLRP---------DCFAMVGVLSACARL 318
VV ++ MI G G EA +L M+++ +P D F M+G + C L
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 24/295 (8%)
Query: 84 FHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETG 143
+ + M QGF P++ T++ VL L L + + G V DV+ T
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 144 LLGFYSKCGHLRDARKVFDDIPE----KNVASWTALICGYSESGLCEEAVDLFRGLLEMG 199
++ + K G + ARK F+++ E NV ++TALI Y ++ A +LF +L G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 200 LRPDSANLVHVLGACARLGDLGSGRWI-------------DRYMSE---SGLHRNVFVGT 243
P+ ++ + G + I D Y + + NV
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 244 TLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAMIQGYASNGLPREALQLFFEMQKE 299
L++ + K +EEAR++ D M E + + + A+I G G EA ++ EM +
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Query: 300 NLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCG 354
+ ++ ++ L ++ M N V+ T +ID K G
Sbjct: 704 GFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 119/320 (37%), Gaps = 34/320 (10%)
Query: 62 QTHN--PNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVL--------- 110
+T N P+T + +I G+ + F + + + M P T++ +L
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 111 KACARLCHFHL-------GHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKVFDD 163
C R+ + + +SLV GD LL KCGH+ V++
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNI 412
Query: 164 IPEKNVASWTALICGYSESGLCEE---AVDLFRGLLEMGLRPDSANLVHVLGACARLGDL 220
+ ICG +S C+ A + +L G+ + N+ G
Sbjct: 413 L--------IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 221 GSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGM----LERDVVCWSAM 276
+ R M G + + ++N ME A +F+ M L DV ++ M
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 277 IQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEF 336
+ + GL +A + F EM++ P+ ++ A + + N M +E
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 337 LSNPVLGTALIDLYAKCGSM 356
L N V +ALID + K G +
Sbjct: 585 LPNIVTYSALIDGHCKAGQV 604
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 9/238 (3%)
Query: 91 YHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSK 150
Y M GF + ++ A + + S ++K GFV D + T LL + +
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 151 CGHLRDARKVFDDIPEK-----NVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSA 205
+LRDA KVFD + ++ N S++ LI G E G EEA L + E G +P +
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 206 NLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEA----RRV 261
++ A G + + M G NV T L++ + G +EEA R++
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Query: 262 FDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLG 319
+ V+ ++A+I GY +G A +L M+K +P+ ++ R+G
Sbjct: 363 VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 37 NYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQ 96
N L+ + R + H K + D +P+ +N +I G+ + +L SM+
Sbjct: 410 NELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 97 QGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRD 156
P+ TFT ++ A + + L+++ G D T L+ K G RD
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRD 529
Query: 157 ARKVFDDIPEKNVA----SWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLG 212
A + + + + + S ++ S+ +E + + + ++GL P ++
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 213 ACARLGDLGSGRWIDRYMSESGLHRNVFVGTTLVNMYAKCGSMEEARRVFDGMLERDV-- 270
R GD+ I M SG NV+ T ++N + G +EEA ++ M + V
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 271 --VCWSAMIQGYASNGLPREALQLFFEM 296
V ++ M++GY +NG AL+ M
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 114/297 (38%), Gaps = 35/297 (11%)
Query: 63 THNPNTFLWNTMIRGMVDNDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLG 122
T PN+ ++ +I G+ + + L M ++G P + T+T ++KA
Sbjct: 261 TCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKA 320
Query: 123 HTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDA----RKVFDDIPEKNVASWTALICG 178
L ++ G +V T L+ + G + +A RK+ D +V ++ ALI G
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 179 YSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRN 238
Y + G A +L + + +P+ ++ R+G +H
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK-----------PYKAVHL- 428
Query: 239 VFVGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQK 298
+R+ D L D+V ++ +I G G A +L M
Sbjct: 429 -------------------LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC 469
Query: 299 ENLRPDCFAMVGVLSACARLGALQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGS 355
++ PDC +++A + G + + GLM + + V GT LID K G
Sbjct: 470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526