Miyakogusa Predicted Gene

Lj3g3v0463710.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0463710.3 Non Chatacterized Hit- tr|G7JVQ8|G7JVQ8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,80.53,0,ENT,EMSY N-terminal; seg,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL,CUFF.40865.3
         (183 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13020.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   192   1e-49
AT2G44440.1 | Symbols:  | Emsy N Terminus (ENT) domain-containin...   172   2e-43
AT3G12140.3 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   140   4e-34
AT3G12140.2 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   140   6e-34
AT3G12140.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   140   6e-34
AT5G06780.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   124   4e-29
AT5G06780.2 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...   121   2e-28
AT5G20030.1 | Symbols:  | Plant Tudor-like RNA-binding protein |...    52   3e-07
AT3G57970.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-lik...    49   2e-06

>AT5G13020.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr5:4129691-4132089
           REVERSE LENGTH=397
          Length = 397

 Score =  192 bits (488), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/160 (63%), Positives = 122/160 (76%), Gaps = 7/160 (4%)

Query: 1   MDYEPYDSSGTDDDLPPTHQNRIPRGGRLAGNGRPAV-GSVPYPRMFDGIDMEAQIHQLE 59
           MDY P DSSGTDDDLPP+HQ R  R  R  GNGRP+V  S P  R+ +  +ME QIH +E
Sbjct: 1   MDYRPSDSSGTDDDLPPSHQGRYQRNARPTGNGRPSVLNSAPLSRVHN--EMETQIHLIE 58

Query: 60  QEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADDMIRRIREWR 119
           QEAYSS+LRAFKAQ+DAI+WEKESLITELRKELR+S+EEHR+LL +VNAD+MIRRIREWR
Sbjct: 59  QEAYSSILRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSRVNADEMIRRIREWR 118

Query: 120 RVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPSVPS 159
           +    Q  +    Q +HD+ PSP VS S KKQK + S+ S
Sbjct: 119 KANSLQSSVP---QLVHDA-PSPAVSGSRKKQKTSQSIAS 154


>AT2G44440.1 | Symbols:  | Emsy N Terminus (ENT) domain-containing
           protein | chr2:18336621-18338950 REVERSE LENGTH=429
          Length = 429

 Score =  172 bits (435), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/151 (58%), Positives = 107/151 (70%), Gaps = 9/151 (5%)

Query: 42  YPRMFDGI--DMEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEH 99
           YP+M+D +  DMEAQIHQ+E+EAY SVLRAFKAQ DAISWEKES+ITELRKEL LSNEEH
Sbjct: 46  YPKMYDDLAADMEAQIHQIEKEAYISVLRAFKAQGDAISWEKESVITELRKELSLSNEEH 105

Query: 100 RQLLGQVNADDMIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPSVPS 159
           R+LLG+VN+DD IRRIREWR+ GG QP M    Q +HD++PSP+VSAS+K  K    +PS
Sbjct: 106 RELLGRVNSDDTIRRIREWRQSGGMQPSMRNAAQVVHDTLPSPSVSASMKTHKPNQPIPS 165

Query: 160 RXXXXXXXX-------XXXXXXAAAKRGSVP 183
           +                     + AKRG VP
Sbjct: 166 QPFASSSPSFHPQADPTHPFASSTAKRGPVP 196


>AT3G12140.3 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr3:3869121-3870964
           REVERSE LENGTH=383
          Length = 383

 Score =  140 bits (354), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)

Query: 51  MEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADD 110
           ME QIHQLEQEAY++VLRAFKAQ+DAISWEKESLITELRKELR+S++EHR+LL +VN DD
Sbjct: 1   METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60

Query: 111 MIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPS 156
            I+RIR+WR+ G  Q     T Q   D +PSPT SA+ KKQK  PS
Sbjct: 61  TIQRIRDWRQGGASQITRHATIQPF-DVLPSPTFSAARKKQKTFPS 105


>AT3G12140.2 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr3:3868947-3870964
           REVERSE LENGTH=327
          Length = 327

 Score =  140 bits (352), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)

Query: 51  MEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADD 110
           ME QIHQLEQEAY++VLRAFKAQ+DAISWEKESLITELRKELR+S++EHR+LL +VN DD
Sbjct: 1   METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60

Query: 111 MIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPS 156
            I+RIR+WR+ G  Q     T Q   D +PSPT SA+ KKQK  PS
Sbjct: 61  TIQRIRDWRQGGASQITRHATIQPF-DVLPSPTFSAARKKQKTFPS 105


>AT3G12140.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr3:3868947-3870964
           REVERSE LENGTH=327
          Length = 327

 Score =  140 bits (352), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)

Query: 51  MEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADD 110
           ME QIHQLEQEAY++VLRAFKAQ+DAISWEKESLITELRKELR+S++EHR+LL +VN DD
Sbjct: 1   METQIHQLEQEAYTAVLRAFKAQSDAISWEKESLITELRKELRVSDDEHRELLSRVNKDD 60

Query: 111 MIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPS 156
            I+RIR+WR+ G  Q     T Q   D +PSPT SA+ KKQK  PS
Sbjct: 61  TIQRIRDWRQGGASQITRHATIQPF-DVLPSPTFSAARKKQKTFPS 105


>AT5G06780.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr5:2094147-2096377
           REVERSE LENGTH=320
          Length = 320

 Score =  124 bits (311), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 4/111 (3%)

Query: 49  IDMEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNA 108
           I+MEAQIH LEQEAYS+VLRAF+AQAD  SW+K +++T LRKELR+S++E+RQLL  V+ 
Sbjct: 6   INMEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHN 65

Query: 109 DDMIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPSVPS 159
           DD+I+RIR+ R  GG+Q   ++  Q+L D  PSPT SAS KKQK   S PS
Sbjct: 66  DDLIKRIRDSRPRGGNQ---VVRHQSL-DVHPSPTFSASRKKQKTFQSYPS 112


>AT5G06780.2 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr5:2094147-2096356
           REVERSE LENGTH=313
          Length = 313

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/109 (60%), Positives = 84/109 (77%), Gaps = 4/109 (3%)

Query: 51  MEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADD 110
           MEAQIH LEQEAYS+VLRAF+AQAD  SW+K +++T LRKELR+S++E+RQLL  V+ DD
Sbjct: 1   MEAQIHILEQEAYSAVLRAFQAQADEFSWDKATVMTNLRKELRISDDENRQLLNNVHNDD 60

Query: 111 MIRRIREWRRVGGHQPGMLITGQALHDSIPSPTVSASLKKQKIAPSVPS 159
           +I+RIR+ R  GG+Q   ++  Q+L D  PSPT SAS KKQK   S PS
Sbjct: 61  LIKRIRDSRPRGGNQ---VVRHQSL-DVHPSPTFSASRKKQKTFQSYPS 105


>AT5G20030.1 | Symbols:  | Plant Tudor-like RNA-binding protein |
           chr5:6764971-6766036 REVERSE LENGTH=326
          Length = 326

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 53  AQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLGQVNADD 110
           A +H+LE +AY S +    A    I+WE+E+ IT LR +L +SNEEH   +  + +DD
Sbjct: 263 ADVHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIRNLISDD 320


>AT3G57970.1 | Symbols:  | Emsy N Terminus (ENT)/ plant Tudor-like
           domains-containing protein | chr3:21465226-21466677
           FORWARD LENGTH=319
          Length = 319

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 43/72 (59%)

Query: 45  MFDGIDMEAQIHQLEQEAYSSVLRAFKAQADAISWEKESLITELRKELRLSNEEHRQLLG 104
           +F  +D + ++  L+  AY  VL AFKA++ AIS  +  ++ EL KEL++  + H+    
Sbjct: 38  LFSPLDKKVKLSMLQDRAYYYVLHAFKAESPAISSSRIVIMQELLKELKIEYKTHQTYHN 97

Query: 105 QVNADDMIRRIR 116
            + AD M+ ++R
Sbjct: 98  AIEADPMVLQLR 109