Miyakogusa Predicted Gene

Lj3g3v0462270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0462270.1 tr|B9IKL1|B9IKL1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_809065 PE=4
SV=1,71.29,0,SUBFAMILY NOT NAMED,NULL; D-LACTATE DEHYDROGENASE,NULL;
FAD_binding_4,FAD linked oxidase,
N-terminal,NODE_60405_length_616_cov_127.275970.path2.1
         (200 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11540.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   240   4e-64
AT2G46760.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   187   3e-48
AT2G46740.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   181   4e-46
AT2G46750.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   180   5e-46
AT5G56490.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   168   2e-42
AT1G32300.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family...   166   1e-41
AT3G47930.1 | Symbols: ATGLDH, GLDH | L-galactono-1,4-lactone de...    52   4e-07
AT3G47930.2 | Symbols: ATGLDH, GLDH | L-galactono-1,4-lactone de...    51   5e-07

>AT5G11540.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr5:3703002-3704981 REVERSE LENGTH=585
          Length = 585

 Score =  240 bits (613), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 131/200 (65%), Positives = 165/200 (82%), Gaps = 3/200 (1%)

Query: 3   PESPVQCNQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVVTK 62
           P+ P++C+Q+GCT+ N+YGTW DRK CHA NVTYPTTE+ L  AV+YA +++LKVK VTK
Sbjct: 27  PQPPIRCDQTGCTVSNAYGTWPDRKTCHAANVTYPTTEEDLRKAVAYAAEHNLKVKTVTK 86

Query: 63  FSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSL 122
           FSHTIPKLACPS  ++ LLIST KY++ IEI+   L VT  SGV LR LI++VE  GFS+
Sbjct: 87  FSHTIPKLACPSG-SDALLISTSKYNSVIEIEPELLTVTADSGVSLRELIEKVEGAGFSI 145

Query: 123 VAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLKA-- 180
             +PYWEGVS+GGLISTG+HGSSW G+GG+VHDHV+GIS+VVPA++SEG+AKV++L+   
Sbjct: 146 GTSPYWEGVSIGGLISTGSHGSSWSGRGGSVHDHVVGISLVVPANQSEGFAKVVRLEEGR 205

Query: 181 PDPLLNAAKLSLGVLGAISK 200
            D LLNA K+SLGVLG ISK
Sbjct: 206 DDTLLNAVKVSLGVLGVISK 225


>AT2G46760.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr2:19213028-19215166 REVERSE LENGTH=603
          Length = 603

 Score =  187 bits (476), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/202 (50%), Positives = 134/202 (66%), Gaps = 5/202 (2%)

Query: 3   PESPVQC--NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           PE PV+C    + CT+ NSYG + DR  C A NV YPTTE +L S V+ A +   K++V 
Sbjct: 38  PEDPVKCVSGNTNCTVTNSYGAFPDRSTCRAANVAYPTTEAELISVVAAATKAGRKMRVT 97

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T++SH+I KLAC +   + LLIST+  +  +  DA  + +TV SGV LR+LI E  + G 
Sbjct: 98  TRYSHSITKLAC-TDGTDGLLISTKFLNHTVRTDATAMTLTVESGVTLRQLIAEAAKVGL 156

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAK--VLKL 178
           +L  APYW G++VGG++ TGAHGSS WGKG AVHD+V  I IV P S ++G+AK  VL+ 
Sbjct: 157 ALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRIVSPGSVNDGFAKVRVLRE 216

Query: 179 KAPDPLLNAAKLSLGVLGAISK 200
                  NAAK+SLGVLG IS+
Sbjct: 217 TTTPKEFNAAKVSLGVLGVISQ 238


>AT2G46740.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr2:19205182-19207455 REVERSE LENGTH=590
          Length = 590

 Score =  181 bits (458), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 98/203 (48%), Positives = 132/203 (65%), Gaps = 7/203 (3%)

Query: 3   PESPVQC--NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           PE PV+C    + C + NS G + DR  C A NV YPTTE +L S V+ A +   K++V 
Sbjct: 34  PEDPVKCVSGNTNCIVTNSLGAFPDRSTCRAANVAYPTTEAELVSIVAAATKAGRKMRVT 93

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T++SH+IPKL C     + L IST+  +  ++ DA  + +TV SGV LR+LI E  + G 
Sbjct: 94  TRYSHSIPKLTCTDGN-DGLFISTKFLNHTVQADAKAMTLTVESGVTLRQLIAEAAKVGL 152

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK- 179
           +L  APYW GV+VGG++ TGAHGSS WGKG AVHD+V  I +V P S ++G+AK+  L  
Sbjct: 153 ALPYAPYWWGVTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRMVSPGSVNDGFAKIRVLSE 212

Query: 180 --APDPLLNAAKLSLGVLGAISK 200
              P+   NAAK+SLGVLG IS+
Sbjct: 213 TTTPNE-FNAAKVSLGVLGVISQ 234


>AT2G46750.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr2:19208443-19210909 REVERSE LENGTH=591
          Length = 591

 Score =  180 bits (457), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/203 (47%), Positives = 132/203 (65%), Gaps = 7/203 (3%)

Query: 3   PESPVQC--NQSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           P+ PV+C    + CT+ NSYG + DR  C A NV YP TE +L S V+ A Q   K++V 
Sbjct: 30  PDDPVKCVSGNTNCTVTNSYGAFPDRSTCRAANVAYPKTEAELVSVVAAATQAGRKMRVT 89

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T++SH+I KL C +     L IST+  +  ++ DA  + +TV SG+ LR+LI E  + G 
Sbjct: 90  TRYSHSITKLVC-TDGTEGLFISTKFLNHTVQADATAMTMTVESGMTLRQLIVEAAKVGL 148

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK- 179
           +L  APYW G++VGG++ TGAHGSS WGKG AVHD+V  I +V P S +EG+AK+  L  
Sbjct: 149 ALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRMVSPGSVNEGFAKIRILSE 208

Query: 180 --APDPLLNAAKLSLGVLGAISK 200
              P+   NAAK+SLGVLG IS+
Sbjct: 209 TTTPNE-FNAAKVSLGVLGVISQ 230


>AT5G56490.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr5:22871507-22873420 FORWARD LENGTH=577
          Length = 577

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 5/202 (2%)

Query: 3   PESPVQCN--QSGCTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKVV 60
           P+ PV C    + CT+ NSYG + DR  C A  V YP TE +L S V+ A +   K++VV
Sbjct: 20  PDDPVNCEFGNTMCTVTNSYGAFPDRSICKAAKVEYPRTEAELVSIVAAATRAGQKMRVV 79

Query: 61  TKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGGF 120
           T++SH+ PKL C   +  TL IST+  +  +  +     +TV SGV LR+LI+E  +   
Sbjct: 80  TRYSHSFPKLVCTDGKDGTL-ISTKFLNHVVTTNPEAKTLTVESGVTLRQLIEEAAKFDL 138

Query: 121 SLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKL-K 179
           +L  APYW G++VGG++ TGAHGSS WGKG AVHD+V  I +V P   S+GY KV  L +
Sbjct: 139 ALPYAPYWWGLTVGGMMGTGAHGSSLWGKGSAVHDYVTEIRLVSPGLASDGYVKVQVLSE 198

Query: 180 APDP-LLNAAKLSLGVLGAISK 200
             DP    AAK+SLGVLG IS+
Sbjct: 199 TIDPEEFRAAKVSLGVLGVISQ 220


>AT1G32300.1 | Symbols:  | D-arabinono-1,4-lactone oxidase family
           protein | chr1:11651342-11653365 FORWARD LENGTH=595
          Length = 595

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/204 (48%), Positives = 128/204 (62%), Gaps = 9/204 (4%)

Query: 3   PESPVQCNQSG---CTLLNSYGTWNDRKDCHALNVTYPTTEQQLHSAVSYAVQNHLKVKV 59
           P+ PV+C +SG   CT+ NSYG + DR  C A  V YP TE +L S V+ A +   KV+V
Sbjct: 21  PDDPVKC-ESGNNMCTVTNSYGAFPDRSICEAAKVEYPKTEAELVSIVAAATRAGQKVRV 79

Query: 60  VTKFSHTIPKLACPSSQANTLLISTEKYDTGIEIDAANLAVTVASGVGLRRLIDEVERGG 119
           VT++ H+IPKL C   + + +LIST+  +  +  +     +TV SGV LR+LI E     
Sbjct: 80  VTRYVHSIPKLVCTDGK-DGVLISTKFLNNVVGTNPEAKTLTVESGVTLRQLIGEAAELE 138

Query: 120 FSLVAAPYWEGVSVGGLISTGAHGSSWWGKGGAVHDHVLGISIVVPASKSEGYAKVLKLK 179
            +L  APYW G++VGGL+ TGAHGSS WGKG AVHD+V  I +V P   S+GY KV  L 
Sbjct: 139 LALPHAPYWWGLTVGGLMGTGAHGSSLWGKGSAVHDYVSEIRMVSPGLASDGYVKVRVLS 198

Query: 180 A---PDPLLNAAKLSLGVLGAISK 200
               PD    AAK+SLGVLG IS+
Sbjct: 199 ETIDPDE-FRAAKVSLGVLGVISQ 221


>AT3G47930.1 | Symbols: ATGLDH, GLDH | L-galactono-1,4-lactone
           dehydrogenase | chr3:17684500-17687426 FORWARD
           LENGTH=610
          Length = 610

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 88  DTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSLVAAPYWEGVSVGGLISTGAHGSSWW 147
           D  +E+D     VTV +G+ +++L+D ++  G +L          +GG+I  GAHG+   
Sbjct: 175 DKVLEVDKEKKRVTVQAGIRVQQLVDAIKDYGLTLQNFASIREQQIGGIIQVGAHGTG-- 232

Query: 148 GKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLGAISK 200
            +   + + V+ + +V PA   +G  ++ + K P+ L + A+  LG LG +++
Sbjct: 233 ARLPPIDEQVISMKLVTPA---KGTIELSREKDPE-LFHLARCGLGGLGVVAE 281


>AT3G47930.2 | Symbols: ATGLDH, GLDH | L-galactono-1,4-lactone
           dehydrogenase | chr3:17684500-17686940 FORWARD
           LENGTH=512
          Length = 512

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 6/113 (5%)

Query: 88  DTGIEIDAANLAVTVASGVGLRRLIDEVERGGFSLVAAPYWEGVSVGGLISTGAHGSSWW 147
           D  +E+D     VTV +G+ +++L+D ++  G +L          +GG+I  GAHG+   
Sbjct: 175 DKVLEVDKEKKRVTVQAGIRVQQLVDAIKDYGLTLQNFASIREQQIGGIIQVGAHGTG-- 232

Query: 148 GKGGAVHDHVLGISIVVPASKSEGYAKVLKLKAPDPLLNAAKLSLGVLGAISK 200
            +   + + V+ + +V PA   +G  ++ + K P+ L + A+  LG LG +++
Sbjct: 233 ARLPPIDEQVISMKLVTPA---KGTIELSREKDPE-LFHLARCGLGGLGVVAE 281